Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001777

Physical Location & Seq

Genomic Coordinates Forward (+)

4861281 .. 4864132

Gene Structure 2852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0039000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGCCGCGCCGCCGTCGAACAAGTCCCCAATCGCCACCCGAGCGAGCCCTAATTCCCGAAGCTCCGAAATCGCCAACCCCGTCCGGCGAAGCTTCACCGGAAACCCATTCGCCAAGCCTTCAATCGTCGCTAATTCAGAGACTCCTCCTCCACGGCGGAGCTCCATGGGGAGAGAGACGGTGGTTACTTTCTCGGAGGACAAAGAAAACGGGAAAGATTCGAGTTGGAAACAAATCCGGGTCCGGTCGCCGGCGGCGAAGAATTTCATGTCGCCGACCATCTCCGCCGCCTCAAAGATCAACGCTTCTCCGAGAAAGAAGATCTTGACCGAGAGGAACGAGCCCGTCCGGACTTCTTCTTCTTCTTCTTCTTCTTCCGAGTTCAAAATCAAAAGCGTGTCCTTTGCTCCGGTACCGGTGGAATATTCCGATCACAAGGAGGAGGTGGGCCCCACAACCCCTAAGCCTCCGAAACCCTTAACTGGGGTTGAAGCAATGGTGGGGCCAGTTGAATGCCCTGAACCTGTTTGTGAAAATGCCTCAGAGGAACAACCTGACTGTGTGAATCTTGACCCGAGTTTCAAGATTAGTCCTCCGGCAGCGGTGGCGTTTTCGGGTTCGGGTCATCGGGTCATTGCGCCGCTGGATGCTGACCCATCTGCTCCTCCTCCTTATGATCCCAAGACCAATTACCTTTCTCCCAGGCCACAGTTTCTTCATTACAGGCCAAACCCAAGAGTTGAGTATTATCTGAGTAAGGATGGTGAGGGCAAGAGGCTTGAGGAGAGCTTTTCGGATACTGAGGAAACCCGGTCGGATTATTCTCCAAAGGAAGTAGAAGATGTTACTTCCCCTGCTGAAGTGGTAAAGGAGGAGGAGGAAGAAGAAGAAGCAAAAGAGGAGGAGGTACCTGTTTTGGAACCAATGCCCACCATCATCAGTCCCAGCACTAAGTCTATGCCAAAGGAGAAGGAGGCTGTTGAAGTAGAAACGTCCAGCAAGCCACGCTTCTCGTGGAGATCAAAGCTCACTGCTTTGATAATGGTTTTGGCAGTTGCGCTTTTCGCGGTTTTGGGTGTTGAAGTGAATGTTCAGGTTTGGTCTGCAAGCTCTGTGTCTTTTGTTTCTGAGTTCGTTTCCAATATCAGAGGTGCCAAGAATTTGGGGCCATTGCAATATTATAACCTCACCTTGATGGAAGATGCTCGGGTTAATGAGTATCCTGTGTTCGATCAATGTAACAAAGAAATGGAAGAAATGGGTGAGTTTGATGTGTTTGGAAATGTAATGGGAAGTGTGTTTGAGGTTGAAGCTTCGGAAGAAAAGGGTCTGCAAGAGATTGGAGCAGCTGAATATGAAGAACCAATTGATCAGGAGGCTGGTCTGGCAGAGATTGGAGCAGCTGAATATGCAGAACCAAGTTATCAGGAGGCTGAAGTACCACAGATTGAATGCTTGGAAGAGAACCAGCCAGAGATTGGAGCCGACGATGTGGAGGAACATGTTGAGCAAGGGAATGAACAAGTTGAGAATATTGAAGCCTTAGAAGAAGAAATGAGACTTTCAGTGATCAGAGCAACTGAGAACCTCGTTGAAGTACATACTGATCCAGAATTTGAGGAAAAGGCTGAATCAACCAACATGGAAGAGGTTTCACTGGAAAAGAATTCTTATGAAGATGTGGAAGCACTTCAGGCTACACAGGCTATAACTGAAGAAAATATTGTTGTTGATCATGTACATTCCGAGCCAGAAAGTATTGCAAGCATTAAGGAGGAGATTGTAAGCTCAGAAGTATTGAATCTCACAGCTGAGGGGGCTGACAGTATGGTTTCCATGGTGAATGTGCTGGGAATTGCTTTCTTGGTTCTCACATTGGTCGGATTCACAGCCATCATCTACATGAAGAAACGAGAGAACTCACCTTCAAATCCTGCAAACTATGCTGTTCAACCATTGGTGACCGAGAAATTAGCTGCAAGTCCCATTGTTCCAATTAGCACTGAGCACACCTACTGTCCTTCTGAAATGAGTAGCTTCCAGACGAGTTCAGGGTACCGCTCAAAAGGACTAAAGGCATCAGATGAAGTAGAAAGCCAGGAGAAGAGGGCCAGGAAGAACAACAGGAGAGACTCCATGGCTTCAATTGACTCCTCAATGGGGTCGCCATCTTATGGGAGTTTTACAACATATGAGAGAATTCCAATTAAGAAGGGATATGGAGAAGAAGAGATTGTAACTCCTGTTAGGCGCTCGAGCAGAATTACGAGGAAAGTCACTTCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0120009 GO:0120010 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO CRAL_TRIO_N

Protein Analysis

762

Amino Acids

83.9

Weight (kDa)

4.65

Isoelectric Point (pI)

69.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18180 AT2G18180 AT2G18180 AT2G18180 AT2G18180 AT4G36490
fragaria_vesca	FvH4_1g03070 FvH4_1g12640
malus_domestica	MD02G1140800.v1.1 MD15G1253600.v1.1
prunus_persica	Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G160200_v2.0.a1 Prupe.7G244900_v2.0.a1
pyrus_communis	pycom02g11090 pycom15g22320
rosa_chinensis	RchiOBHm_Chr2g0088201 RchiOBHm_Chr2g0100591 RchiOBHm_Chr2g0100601
rosa_laevigata	RLG00000015931
rosa_multiflora	Rmu_sc0001497.1_g000001 Rmu_sc0003275.1_g000070
rosa_roxburghii	Rroxscaffold_2G00142100 Rroxscaffold_7G00200090
rosa_rugosa	Rorug01G0481700 Rorug02G0089800 Rorug02G0089900 Rorug02G0090000 Rorug02G0090100 Rorug06G0039000 Rorug06G0389100
rosa_samantha	Rh2AG036800 Rh2AG139000 Rh2BG036000 Rh2BG142300 Rh2CG037100 Rh2CG144600 Rh2DG036500 Rh2DG144000
rosa_wichuraiana	Rw2G002900 Rw2G010890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1182
Acc65I	GGTACC	3 cut(s)	412, 907, 2055
AccB1I	GGYRCC	4 cut(s)	412, 907, 1151, 2055
AccB7I	CCANNNNNTGG	2 cut(s)	1478, 2174
AccBSI	CCGCTC	1 cut(s)	2061
AccII	CGCG	2 cut(s)	8, 1067
AccIII	TCCGGA	1 cut(s)	348
AclWI	GGATC	2 cut(s)	671, 1601
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	262, 1159, 1613, 1666, 2199
AcuI	CTGAAG	4 cut(s)	879, 1455, 1676, 1734
AfaI	GTAC	6 cut(s)	414, 909, 1440, 1599, 1740, 2057
AfiI	CCNNNNNNNGG	6 cut(s)	250, 482, 483, 1478, 2160, 2174
AflIII	ACRYGT	1 cut(s)	1501
AgeI	ACCGGT	1 cut(s)	415
AjnI	CCWGG	3 cut(s)	701, 2097, 2111
Alw21I	GWGCWC	2 cut(s)	164, 2010
Alw26I	GTCTC	4 cut(s)	134, 170, 1552, 2124
AlwI	GGATC	2 cut(s)	671, 1601
Ama87I	CYCGRG	4 cut(s)	39, 574, 1206, 2254
Aor13HI	TCCGGA	1 cut(s)	348
AoxI	GGCC	7 cut(s)	3, 448, 503, 704, 725, 1166, 2109
ApaI	GGGCCC	1 cut(s)	452
ApeKI	GCWGC	4 cut(s)	599, 1346, 1400, 1976
ApoI	RAATTY	5 cut(s)	262, 1159, 1613, 1666, 2199
AsiGI	ACCGGT	1 cut(s)	415
Asp700I	GAANNNNTTC	2 cut(s)	263, 1689
Asp718I	GGTACC	3 cut(s)	412, 907, 2055
AspLEI	GCGC	4 cut(s)	10, 640, 1060, 2253
AspS9I	GGNCC	6 cut(s)	241, 448, 449, 503, 1166, 2109
AsuC2I	CCSGG	2 cut(s)	239, 811
AsuHPI	GGTGA	7 cut(s)	88, 776, 1180, 1274, 1852, 1914, 1972
AvaI	CYCGRG	4 cut(s)	39, 574, 1206, 2254
AvaII	GGWCC	1 cut(s)	241
BaeGI	GKGCMC	1 cut(s)	452
BanI	GGYRCC	4 cut(s)	412, 907, 1151, 2055
BanII	GRGCYC	4 cut(s)	50, 164, 345, 452
BauI	CACGAG	1 cut(s)	1012
Bbv12I	GWGCWC	2 cut(s)	164, 2010
BbvCI	CCTCAGC	1 cut(s)	1812
BbvI	GCAGC	4 cut(s)	611, 1358, 1412, 1963
BccI	CCATC	7 cut(s)	287, 664, 755, 941, 1189, 1901, 2176
BceAI	ACGGC	1 cut(s)	170
BciT130I	CCWGG	3 cut(s)	703, 2099, 2113
BciVI	GTATCC	2 cut(s)	790, 1230
BclI	TGATCA	3 cut(s)	1369, 1569, 1732
BcnI	CCSGG	2 cut(s)	239, 811
BcoDI	GTCTC	4 cut(s)	134, 170, 1552, 2124
BfoI	RGCGCY	1 cut(s)	2254
BfuI	GTATCC	2 cut(s)	790, 1230
BglII	AGATCT	1 cut(s)	321
BisI	GCNGC	9 cut(s)	6, 11, 255, 288, 600, 641, 1347, 1401, 1977
BlsI	GCNGC	9 cut(s)	7, 12, 256, 289, 601, 642, 1348, 1402, 1978
Bme1390I	CCNGG	5 cut(s)	239, 703, 811, 2099, 2113
Bme18I	GGWCC	1 cut(s)	241
BmeT110I	CYCGRG	4 cut(s)	39, 574, 1206, 2254
BmgT120I	GGNCC	6 cut(s)	241, 448, 449, 503, 1166, 2109
BmrFI	CCNGG	5 cut(s)	239, 703, 811, 2099, 2113
BmrI	ACTGGG	1 cut(s)	492
BmsI	GCATC	3 cut(s)	637, 1192, 2087
BmuI	ACTGGG	1 cut(s)	492
Bpu10I	CCTNAGC	2 cut(s)	462, 1812
BpuEI	CTTGAG	1 cut(s)	800
BpuMI	CCSGG	2 cut(s)	239, 811
BsaJI	CCNNGG	5 cut(s)	152, 165, 701, 1836, 2136
BsaWI	WCCGGW	5 cut(s)	98, 243, 348, 409, 415
BsaXI	ACNNNNNCTCC	2 cut(s)	133, 163
Bsc4I	CCNNNNNNNGG	6 cut(s)	250, 482, 483, 1478, 2160, 2174
Bse118I	RCCGGY	2 cut(s)	250, 415
Bse1I	ACTGG	3 cut(s)	487, 506, 1662
Bse3DI	GCAATG	3 cut(s)	501, 633, 1169
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	3 cut(s)	703, 2099, 2113
BseDI	CCNNGG	5 cut(s)	152, 165, 701, 1836, 2136
BseGI	GGATG	2 cut(s)	652, 766
BseLI	CCNNNNNNNGG	6 cut(s)	250, 482, 483, 1478, 2160, 2174
BseMI	GCAATG	3 cut(s)	501, 633, 1169
BseMII	CTCAG	8 cut(s)	555, 743, 792, 1119, 1572, 1803, 1803, 1995
BseNI	ACTGG	3 cut(s)	487, 506, 1662
BseSI	GKGCMC	1 cut(s)	452
BseXI	GCAGC	4 cut(s)	611, 1358, 1412, 1963
BseYI	CCCAGC	2 cut(s)	944, 1849
Bsh1236I	CGCG	2 cut(s)	8, 1067
Bsh1285I	CGRYCG	2 cut(s)	248, 815
BshFI	GGCC	7 cut(s)	5, 450, 505, 706, 727, 1168, 2111
BshNI	GGYRCC	4 cut(s)	412, 907, 1151, 2055
BshTI	ACCGGT	1 cut(s)	415
BsiEI	CGRYCG	2 cut(s)	248, 815
BsiHKAI	GWGCWC	2 cut(s)	164, 2010
BsiHKCI	CYCGRG	4 cut(s)	39, 574, 1206, 2254
BslFI	GGGAC	3 cut(s)	10, 927, 1968
BslI	CCNNNNNNNGG	6 cut(s)	250, 482, 483, 1478, 2160, 2174
BsmAI	GTCTC	4 cut(s)	134, 170, 1552, 2124
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	3 cut(s)	10, 927, 1968
BsmI	GAATGC	2 cut(s)	518, 1457
BsnI	GGCC	7 cut(s)	5, 450, 505, 706, 727, 1168, 2111
BsoBI	CYCGRG	4 cut(s)	39, 574, 1206, 2254
Bsp120I	GGGCCC	1 cut(s)	448
Bsp1286I	GDGCHC	5 cut(s)	50, 164, 345, 452, 2010
Bsp13I	TCCGGA	1 cut(s)	348
Bsp1407I	TGTACA	1 cut(s)	1738
Bsp19I	CCATGG	3 cut(s)	165, 1836, 2136
BspANI	GGCC	7 cut(s)	5, 450, 505, 706, 727, 1168, 2111
BspCNI	CTCAG	8 cut(s)	554, 744, 793, 1120, 1573, 1802, 1804, 1996
BspEI	TCCGGA	1 cut(s)	348
BspFNI	CGCG	2 cut(s)	8, 1067
BspPI	GGATC	2 cut(s)	671, 1601
BspT107I	GGYRCC	4 cut(s)	412, 907, 1151, 2055
BsrBI	CCGCTC	1 cut(s)	2061
BsrDI	GCAATG	3 cut(s)	501, 633, 1169
BsrFI	RCCGGY	2 cut(s)	250, 415
BsrGI	TGTACA	1 cut(s)	1738
BsrI	ACTGG	3 cut(s)	487, 506, 1662
BssAI	RCCGGY	2 cut(s)	250, 415
BssECI	CCNNGG	5 cut(s)	152, 165, 701, 1836, 2136
BssSI	CACGAG	1 cut(s)	1012
BssT1I	CCWWGG	3 cut(s)	165, 1836, 2136
Bst2BI	CACGAG	1 cut(s)	1012
Bst2UI	CCWGG	3 cut(s)	703, 2099, 2113
Bst4CI	ACNGT	5 cut(s)	181, 560, 711, 1826, 2018
Bst6I	CTCTTC	4 cut(s)	1455, 1641, 2099, 2223
BstAPI	GCANNNNNTGC	1 cut(s)	1943
BstAUI	TGTACA	1 cut(s)	1738
BstC8I	GCNNGC	5 cut(s)	46, 252, 1001, 1108, 1765
BstDSI	CCRYGG	4 cut(s)	152, 165, 1836, 2136
BstEII	GGTNACC	1 cut(s)	1960
BstF5I	GGATG	2 cut(s)	652, 766
BstFNI	CGCG	2 cut(s)	8, 1067
BstH2I	RGCGCY	1 cut(s)	2254
BstHHI	GCGC	4 cut(s)	10, 640, 1060, 2253
BstMAI	GTCTC	4 cut(s)	134, 170, 1552, 2124
BstMCI	CGRYCG	2 cut(s)	248, 815
BstNI	CCWGG	3 cut(s)	703, 2099, 2113
BstNSI	RCATGY	1 cut(s)	1505
BstPI	GGTNACC	1 cut(s)	1960
BstSCI	CCNGG	5 cut(s)	237, 701, 809, 2097, 2111
BstSLI	GKGCMC	1 cut(s)	452
BstUI	CGCG	2 cut(s)	8, 1067
BstV1I	GCAGC	4 cut(s)	611, 1358, 1412, 1963
BstX2I	RGATCY	1 cut(s)	321
BstXI	CCANNNNNNTGG	1 cut(s)	1162
BstYI	RGATCY	1 cut(s)	321
BsuI	GTATCC	2 cut(s)	790, 1230
BsuRI	GGCC	7 cut(s)	5, 450, 505, 706, 727, 1168, 2111
BtgI	CCRYGG	4 cut(s)	152, 165, 1836, 2136
BtsCI	GGATG	2 cut(s)	652, 766
BtsI	GCAGTG	1 cut(s)	1029
BtsIMutI	CAGTG	4 cut(s)	1029, 1572, 1655, 2001
Cac8I	GCNNGC	5 cut(s)	46, 252, 1001, 1108, 1765
CfoI	GCGC	4 cut(s)	10, 640, 1060, 2253
Cfr10I	RCCGGY	2 cut(s)	250, 415
Cfr13I	GGNCC	6 cut(s)	241, 448, 449, 503, 1166, 2109
Csp6I	GTAC	6 cut(s)	413, 908, 1439, 1598, 1739, 2056
CspAI	ACCGGT	1 cut(s)	415
CviAII	CATG	8 cut(s)	166, 268, 1502, 1642, 1736, 1837, 1903, 2137
CviQI	GTAC	6 cut(s)	413, 908, 1439, 1598, 1739, 2056
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	1455, 1641, 2099, 2223
EarI	CTCTTC	4 cut(s)	1455, 1641, 2099, 2223
EciI	GGCGGA	2 cut(s)	172, 274
Ecl136II	GAGCTC	1 cut(s)	162
Eco130I	CCWWGG	3 cut(s)	165, 1836, 2136
Eco24I	GRGCYC	4 cut(s)	50, 164, 345, 452
Eco47I	GGWCC	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	162
Eco57I	CTGAAG	4 cut(s)	879, 1455, 1676, 1734
Eco88I	CYCGRG	4 cut(s)	39, 574, 1206, 2254
Eco91I	GGTNACC	1 cut(s)	1960
EcoICRI	GAGCTC	1 cut(s)	162
EcoO109I	RGGNCCY	1 cut(s)	449
EcoO65I	GGTNACC	1 cut(s)	1960
EcoRI	GAATTC	2 cut(s)	1666, 2199
EcoRII	CCWGG	3 cut(s)	701, 2097, 2111
EcoT14I	CCWWGG	3 cut(s)	165, 1836, 2136
EcoT38I	GRGCYC	4 cut(s)	50, 164, 345, 452
ErhI	CCWWGG	3 cut(s)	165, 1836, 2136
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	8 cut(s)	169, 271, 1505, 1645, 1739, 1840, 1906, 2140
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 992, 1024
FaqI	GGGAC	3 cut(s)	10, 927, 1968
FatI	CATG	8 cut(s)	165, 267, 1501, 1641, 1735, 1836, 1902, 2136
FauNDI	CATATG	1 cut(s)	2191
FbaI	TGATCA	3 cut(s)	1369, 1569, 1732
Fnu4HI	GCNGC	9 cut(s)	6, 11, 255, 288, 600, 641, 1347, 1401, 1977
FokI	GGATG	2 cut(s)	659, 773
FriOI	GRGCYC	4 cut(s)	50, 164, 345, 452
Fsp4HI	GCNGC	9 cut(s)	6, 11, 255, 288, 600, 641, 1347, 1401, 1977
GlaI	GCGC	4 cut(s)	9, 639, 1059, 2252
GluI	GCNGC	9 cut(s)	6, 11, 255, 288, 600, 641, 1347, 1401, 1977
GsaI	CCCAGC	2 cut(s)	948, 1853
HaeII	RGCGCY	1 cut(s)	2254
HaeIII	GGCC	7 cut(s)	5, 450, 505, 706, 727, 1168, 2111
HhaI	GCGC	4 cut(s)	10, 640, 1060, 2253
Hin1II	CATG	8 cut(s)	169, 271, 1505, 1645, 1739, 1840, 1906, 2140
Hin6I	GCGC	4 cut(s)	8, 638, 1058, 2251
HinP1I	GCGC	4 cut(s)	8, 638, 1058, 2251
HindIII	AAGCTT	2 cut(s)	91, 1311
HinfI	GANTC	8 cut(s)	142, 218, 565, 1631, 1801, 1884, 2132, 2150
HphI	GGTGA	7 cut(s)	88, 776, 1180, 1274, 1852, 1914, 1972
Hpy188III	TCNNGA	9 cut(s)	57, 325, 349, 569, 583, 1373, 1427, 1610, 2041
Hpy99I	CGWCG	3 cut(s)	19, 131, 1490
HpyAV	CCTTC	5 cut(s)	129, 964, 1935, 2031, 2206
HpyCH4III	ACNGT	5 cut(s)	181, 560, 711, 1826, 2018
HpyCH4IV	ACGT	1 cut(s)	992
HpyCH4V	TGCA	7 cut(s)	1106, 1174, 1333, 1412, 1763, 1937, 1979
HpySE526I	ACGT	1 cut(s)	992
Hsp92II	CATG	8 cut(s)	169, 271, 1505, 1645, 1739, 1840, 1906, 2140
HspAI	GCGC	4 cut(s)	8, 638, 1058, 2251
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	3 cut(s)	416, 911, 2059
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	3 cut(s)	1369, 1569, 1732
LmnI	GCTCC	8 cut(s)	68, 159, 167, 412, 667, 1343, 1397, 1481
Lsp1109I	GCAGC	4 cut(s)	611, 1358, 1412, 1963
LweI	GCATC	3 cut(s)	637, 1192, 2087
MaeII	ACGT	1 cut(s)	992
MaeIII	GTNAC	6 cut(s)	184, 844, 1238, 1960, 2236, 2275
MbiI	CCGCTC	1 cut(s)	2061
MfeI	CAATTG	2 cut(s)	1365, 2145
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	5 cut(s)	50, 164, 345, 452, 2010
MlyI	GAGTC	3 cut(s)	136, 2126, 2144
MmeI	TCCRAC	3 cut(s)	206, 795, 1861
MreI	CGCCGGCG	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	348
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	263, 1689
MseI	TTAA	4 cut(s)	479, 1212, 1770, 2208
MslI	CAYNNNNRTG	2 cut(s)	1193, 1901
MspA1I	CMGCKG	5 cut(s)	602, 643, 1349, 1403, 1811
MspR9I	CCNGG	5 cut(s)	239, 703, 811, 2099, 2113
MunI	CAATTG	2 cut(s)	1365, 2145
Mva1269I	GAATGC	2 cut(s)	518, 1457
MvaI	CCWGG	3 cut(s)	703, 2099, 2113
MvnI	CGCG	2 cut(s)	8, 1067
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	239, 811
NcoI	CCATGG	3 cut(s)	165, 1836, 2136
NdeI	CATATG	1 cut(s)	2191
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	8 cut(s)	169, 271, 1505, 1645, 1739, 1840, 1906, 2140
NmuCI	GTSAC	2 cut(s)	1960, 2275
NspI	RCATGY	1 cut(s)	1505
PaeR7I	CTCGAG	1 cut(s)	2254
PciI	ACATGT	1 cut(s)	1501
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 254
PctI	GAATGC	2 cut(s)	518, 1457
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	2 cut(s)	263, 1689
PfeI	GAWTC	5 cut(s)	218, 565, 1631, 1801, 1884
PflMI	CCANNNNNTGG	2 cut(s)	1478, 2174
PinAI	ACCGGT	1 cut(s)	415
PkrI	GCNGC	9 cut(s)	7, 12, 256, 289, 601, 642, 1348, 1402, 1978
PleI	GAGTC	3 cut(s)	136, 2126, 2144
PpsI	GAGTC	3 cut(s)	136, 2126, 2144
PscI	ACATGT	1 cut(s)	1501
PsiI	TTATAA	1 cut(s)	1182
Psp124BI	GAGCTC	1 cut(s)	164
Psp6I	CCWGG	3 cut(s)	701, 2097, 2111
PspEI	GGTNACC	1 cut(s)	1960
PspFI	CCCAGC	2 cut(s)	944, 1849
PspGI	CCWGG	3 cut(s)	701, 2097, 2111
PspOMI	GGGCCC	1 cut(s)	448
PspPI	GGNCC	6 cut(s)	241, 448, 449, 503, 1166, 2109
PspXI	VCTCGAGB	1 cut(s)	2254
PsrI	GAACNNNNNNTAC	2 cut(s)	1211, 1243
PsuI	RGATCY	1 cut(s)	321
PvuII	CAGCTG	3 cut(s)	1349, 1403, 1811
RsaI	GTAC	6 cut(s)	414, 909, 1440, 1599, 1740, 2057
RsaNI	GTAC	6 cut(s)	413, 908, 1439, 1598, 1739, 2056
RseI	CAYNNNNRTG	2 cut(s)	1193, 1901
SacI	GAGCTC	1 cut(s)	164
SaqAI	TTAA	4 cut(s)	479, 1212, 1770, 2208
SatI	GCNGC	9 cut(s)	6, 11, 255, 288, 600, 641, 1347, 1401, 1977
Sau96I	GGNCC	6 cut(s)	241, 448, 449, 503, 1166, 2109
SchI	GAGTC	3 cut(s)	136, 2126, 2144
ScrFI	CCNGG	5 cut(s)	239, 703, 811, 2099, 2113
SduI	GDGCHC	5 cut(s)	50, 164, 345, 452, 2010
SfaNI	GCATC	3 cut(s)	637, 1192, 2087
Sfr274I	CTCGAG	1 cut(s)	2254
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	241
SlaI	CTCGAG	1 cut(s)	2254
SmiMI	CAYNNNNRTG	2 cut(s)	1193, 1901
SmlI	CTYRAG	2 cut(s)	779, 2254
SmoI	CTYRAG	2 cut(s)	779, 2254
SspI	AATATT	4 cut(s)	425, 1178, 1534, 1723
SstI	GAGCTC	1 cut(s)	164
StyD4I	CCNGG	5 cut(s)	237, 701, 809, 2097, 2111
StyI	CCWWGG	3 cut(s)	165, 1836, 2136
TaaI	ACNGT	5 cut(s)	181, 560, 711, 1826, 2018
TaiI	ACGT	1 cut(s)	995
TaqI	TCGA	4 cut(s)	17, 221, 1230, 2255
TaqII	GACCGA	2 cut(s)	344, 1979
TatI	WGTACW	2 cut(s)	1597, 1738
TauI	GCSGC	5 cut(s)	8, 13, 257, 290, 643
TfiI	GAWTC	5 cut(s)	218, 565, 1631, 1801, 1884
Tru1I	TTAA	4 cut(s)	479, 1212, 1770, 2208
Tru9I	TTAA	4 cut(s)	479, 1212, 1770, 2208
TscAI	CASTG	4 cut(s)	1036, 1572, 1662, 2008
TseFI	GTSAC	2 cut(s)	1960, 2275
TseI	GCWGC	4 cut(s)	599, 1346, 1400, 1976
Tsp45I	GTSAC	2 cut(s)	1960, 2275
TspDTI	ATGAA	7 cut(s)	256, 707, 1371, 1533, 1689, 1919, 2100
TspRI	CASTG	4 cut(s)	1036, 1572, 1662, 2008
Van91I	CCANNNNNTGG	2 cut(s)	1478, 2174
VpaK11BI	GGWCC	1 cut(s)	241
XapI	RAATTY	5 cut(s)	262, 1159, 1613, 1666, 2199
XceI	RCATGY	1 cut(s)	1505
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1011, 1475
XhoI	CTCGAG	1 cut(s)	2254
XmnI	GAANNNNTTC	2 cut(s)	263, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.