Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0009275

Physical Location & Seq

Genomic Coordinates Reverse (-)

10890565 .. 10893444

Gene Structure 2880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g14290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGATTCCCTTCCTCCTCCTCCTCCTCGCCACCGCCGTCCACCCCTCCACTTCCCTTCCATTCCCTCCGCCGCCTCCAAACCTCCTCCTCCCATCCTCCGACGCCGTCGCCCTCCTGTCCTTCAAATCCCAAGCCGACCTCAACAACAAGCTCCTCTACACCCTCAACGAGCGCTTCGACTACTGCCAATGGCAGGGCGTCAAGTGCTCCCAGGGCCGCGTCGTCCGCTTCGTCCTCCAGTCCTTCTCCCTCCGTGGCTCCTTCCCTCCCGACACCCTCTCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCACAACAACTCCCTCTCCGGCCCCATCCCCGACCTCTCCCCTCTCCAGAACCTCAAGTCCCTCTTCCTCAACCGCAACTCCTTCTCCGGCTCCTTCCCCCCCTCCATCCTCGCCCTCCACCGCCTCACCGTCCTCGATCTCTCCTTCAACGACTTCTCCGGTCCCATTCCTGACAACCTCTCTGGCCTGGACCGGCTCACCTCGCTCCAGCTCCAGTCGAACCGCTTCAACGGCTCCCTCCCGGGTCTGAACCAGTCCTTCCTTTTAATCTTCAACGTCTCCTTTAATAACCTGACCGGCCCGGTTCCCCCTTCCCTGTCCCGGTTCGACGCGTCGTCGTTTCAGCTCAACCCGGGGCTCTGCGGCGAGATTGTGAACCGGGCGTGCAGCTCGCACGCCCCATTCTTCGAATCTCGCAATGCCAGTTCAACCTCTCCGGCGTCGGAGCCGCTGGGGGAGAGCACTGCAGAGTCTCAGGGAGTTGTTCTGTCTCCGCCTTCCCCGAAAAACCACAAGAAAACCGGCGTCATTCTCGGCGTCGCAATCGGGGTTTCGCTCCTCGTCGCCGCCGTCTTATGCCTCTTTGCGGTGGCTCGAAACCATAACAAAACCATCACTTACACAGACACAAAACCGTCGCCAATTACCTCACCAGCCAATCGCATTCACTCTAATCCAAACAATTTCAGAACCATCGAAGCACAGATCCCAGAACAGAGGGAGGTGGTGCAGTTTTCCGACAGGGTAAAGACGGTTGAACAAGCAGTTCCTCCGAGAGCGATTCCGAGGAGCGGGAACTTGATTTTTTGCTACGGGGAGGCTCAGCTGTACAGTCTGGAGCAGCTGATGAGAGCCTCGGCGGAGTTGCTCGGGAGGGGTAGCATTGGGACTACGTACAAGGCGGTGCTGGACAACCAGCTGATTGTGACGGTGAAGAGATTGGACGCCGGCAAGACGGCGATTACAAGCGGAGAAGCGTTTGAGGAGCATATGGACGTTATGGGCGGGTTGCGGCATCCGTATCTGGTTCCGGTGAGGGCTTATTTTCAGGCGAAGGGAGAGCGGCTGGTGATCTATGATTACCAACCCAACGGCAGTCTATTCAATCTCATTCACGGTTCGAAATCAACTAGAGCAAGACCTCTGCATTGGACATCATGCTTGAAGATAGCTGAAGATGTAGCTCAAGGCCTTGCTTATATTCACCAATCGTCGTCCCTAATCCATGGCAATCTCAAGTCCTCCAATGTTCTCCTCGGAGGCGACTTCGAGGCCTGTCTCACGGACTACGGCCTTGCCTTCTTTGCAGACACTTCTGCAAATGAAGATCCTGATTCTGCAGGCTATAAAGCCCCCGAGATTCGCAAGTCCAGCAGGCGAGCCACGGCCAAATCCGATGTCTATGCCTTTGGCATCTTATTGCTTGAGCTCTTGACAGGTAAACATCCGTCCCAACATCCGCTTCTCATGCCCACGGACGTGCCTGATTGGGTCAGAGTAATGAGGGATGACGATGTTGGGGATGACAATCAACTGGGAATGCTCACCGAGGTCGCTTGTATTTGTAGTTTGACGTCCCCGGAACAGAGGCCGGCAATGTGGCAAGTGTTGAAGATGATACAGGAGATTAAAGAGAGTGTGATGACTGATGATAACGCAGACGTCGGATTTTCGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

664

Amino Acids

72.5

Weight (kDa)

6.74

Isoelectric Point (pI)

45.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	121 - 180	3.9e-06	Leucine rich repeat
Pkinase	PF00069	392 - 590	4.7e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	392 - 642	4.2e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50230 AT3G50230 AT5G67200
fragaria_vesca	FvH4_1g16410
malus_domestica	MD02G1176600.v1.1 MD08G1095300.v1.1
prunus_persica	Prupe.6G231100_v2.0.a1
pyrus_communis	pycom01g08530 pycom02g14290 pycom15g07270
rosa_chinensis	RchiOBHm_Chr2g0106291
rosa_laevigata	RLG00000017486
rosa_multiflora	Rmu_sc0020846.1_g000001 Rmu_sc0021309.1_g000001 Rmu_ssc0000338.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137300
rosa_rugosa	Rorug02G0134500
rosa_samantha	Rh2AG185300 Rh2BG195600 Rh2CG190400 Rh2DG191500
rosa_wichuraiana	Rw2G014470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1889, 1977
AccBSI	CCGCTC	2 cut(s)	1104, 1375
AccII	CGCG	3 cut(s)	219, 300, 644
AclWI	GGATC	2 cut(s)	1012, 1634
AcoI	YGGCCR	1 cut(s)	1698
AcuI	CTGAAG	1 cut(s)	1506
AcyI	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
AfaI	GTAC	2 cut(s)	1142, 1208
AfeI	AGCGCT	1 cut(s)	173
AfiI	CCNNNNNNNGG	4 cut(s)	193, 633, 898, 1103
AflIII	ACRYGT	1 cut(s)	642
AgsI	TTSAA	9 cut(s)	124, 460, 541, 586, 741, 1070, 1417, 1477, 1924
AhdI	GACNNNNNGTC	1 cut(s)	646
AjiI	CACGTC	1 cut(s)	1792
AjnI	CCWGG	2 cut(s)	210, 498
AjuI	GAANNNNNNNTTGG	2 cut(s)	1758, 1790
AleI	CACNNNNGTG	1 cut(s)	1790
AloI	GAACNNNNNNTCC	2 cut(s)	353, 385
Alw21I	GWGCWC	3 cut(s)	209, 776, 1743
Alw26I	GTCTC	4 cut(s)	595, 789, 807, 1595
AlwI	GGATC	2 cut(s)	1012, 1634
Ama87I	CYCGRG	4 cut(s)	553, 664, 1181, 1667
Aor51HI	AGCGCT	1 cut(s)	173
AoxI	GGCC	9 cut(s)	214, 331, 496, 610, 1501, 1584, 1603, 1698, 1901
ApeKI	GCWGC	2 cut(s)	699, 1153
ArsI	GACNNNNNNTTYG	2 cut(s)	1695, 1727
Asp700I	GAANNNNTTC	1 cut(s)	536
AspLEI	GCGC	1 cut(s)	174
AspS9I	GGNCC	5 cut(s)	214, 332, 473, 502, 611
AsuC2I	CCSGG	8 cut(s)	554, 555, 614, 634, 665, 666, 692, 1892
AsuHPI	GGTGA	8 cut(s)	430, 502, 954, 1255, 1357, 1393, 1508, 1849
AsuII	TTCGAA	3 cut(s)	720, 1433, 1985
AvaI	CYCGRG	4 cut(s)	553, 664, 1181, 1667
AvaII	GGWCC	2 cut(s)	473, 502
BanII	GRGCYC	2 cut(s)	672, 1743
Bbv12I	GWGCWC	3 cut(s)	209, 776, 1743
BbvCI	CCTCAGC	1 cut(s)	305
BbvI	GCAGC	2 cut(s)	711, 1165
BccI	CCATC	5 cut(s)	100, 344, 425, 932, 1013
BceAI	ACGGC	8 cut(s)	20, 89, 559, 866, 1284, 1420, 1618, 1713
BcgI	CGANNNNNNTGC	2 cut(s)	1697, 1731
BciT130I	CCWGG	2 cut(s)	212, 500
BcnI	CCSGG	8 cut(s)	554, 555, 614, 634, 665, 666, 692, 1892
BcoDI	GTCTC	4 cut(s)	595, 789, 807, 1595
BfaI	CTAG	1 cut(s)	1443
BfmI	CTRYAG	2 cut(s)	777, 1650
BfoI	RGCGCY	1 cut(s)	175
BisI	GCNGC	9 cut(s)	71, 217, 676, 700, 761, 879, 1154, 1325, 1376
BlpI	GCTNAGC	1 cut(s)	1134
BlsI	GCNGC	9 cut(s)	72, 218, 677, 701, 762, 880, 1155, 1326, 1377
Bme18I	GGWCC	2 cut(s)	473, 502
BmeRI	GACNNNNNGTC	1 cut(s)	646
BmeT110I	CYCGRG	4 cut(s)	553, 664, 1181, 1667
BmgBI	CACGTC	1 cut(s)	1792
BmgT120I	GGNCC	5 cut(s)	214, 332, 473, 502, 611
BmiI	GGNNCC	8 cut(s)	259, 334, 403, 475, 547, 618, 759, 1341
BmrI	ACTGGG	1 cut(s)	1856
BmsI	GCATC	2 cut(s)	1336, 1734
BmuI	ACTGGG	1 cut(s)	1856
BpmI	CTGGAG	5 cut(s)	221, 341, 503, 509, 1169
Bpu10I	CCTNAGC	1 cut(s)	305
Bpu1102I	GCTNAGC	1 cut(s)	1134
Bpu14I	TTCGAA	3 cut(s)	720, 1433, 1985
BpuEI	CTTGAG	4 cut(s)	350, 1482, 1532, 1757
BpuMI	CCSGG	8 cut(s)	554, 555, 614, 634, 665, 666, 692, 1892
BsaAI	YACGTR	1 cut(s)	1206
BsaBI	GATNNNNATC	1 cut(s)	1839
BsaHI	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
BsaWI	WCCGGW	2 cut(s)	470, 1342
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 633, 898, 1103
Bse118I	RCCGGY	5 cut(s)	504, 608, 833, 1259, 1903
Bse1I	ACTGG	5 cut(s)	238, 526, 565, 735, 1851
Bse3DI	GCAATG	2 cut(s)	736, 1914
Bse8I	GATNNNNATC	1 cut(s)	1839
BseBI	CCWGG	2 cut(s)	212, 500
BseGI	GGATG	8 cut(s)	92, 336, 417, 1327, 1756, 1768, 1825, 1840
BseJI	GATNNNNATC	1 cut(s)	1839
BseLI	CCNNNNNNNGG	4 cut(s)	193, 633, 898, 1103
BseMI	GCAATG	2 cut(s)	736, 1914
BseMII	CTCAG	3 cut(s)	319, 800, 1148
BseNI	ACTGG	5 cut(s)	238, 526, 565, 735, 1851
BseXI	GCAGC	2 cut(s)	711, 1165
BseYI	CCCAGC	1 cut(s)	763
BsgI	GTGCAG	2 cut(s)	718, 1061
Bsh1236I	CGCG	3 cut(s)	219, 300, 644
BshFI	GGCC	9 cut(s)	216, 333, 498, 612, 1503, 1586, 1605, 1700, 1903
BsiHKAI	GWGCWC	3 cut(s)	209, 776, 1743
BsiHKCI	CYCGRG	4 cut(s)	553, 664, 1181, 1667
BslFI	GGGAC	7 cut(s)	355, 459, 616, 1213, 1513, 1747, 1873
BslI	CCNNNNNNNGG	4 cut(s)	193, 633, 898, 1103
BsmAI	GTCTC	4 cut(s)	595, 789, 807, 1595
BsmBI	CGTCTC	1 cut(s)	595
BsmFI	GGGAC	7 cut(s)	355, 459, 616, 1213, 1513, 1747, 1873
BsmI	GAATGC	2 cut(s)	975, 1857
BsnI	GGCC	9 cut(s)	216, 333, 498, 612, 1503, 1586, 1605, 1700, 1903
BsoBI	CYCGRG	4 cut(s)	553, 664, 1181, 1667
Bsp119I	TTCGAA	3 cut(s)	720, 1433, 1985
Bsp1286I	GDGCHC	4 cut(s)	209, 672, 776, 1743
Bsp1407I	TGTACA	1 cut(s)	1140
Bsp143I	GATC	4 cut(s)	448, 1017, 1383, 1639
Bsp1720I	GCTNAGC	1 cut(s)	1134
Bsp19I	CCATGG	1 cut(s)	1537
BspANI	GGCC	9 cut(s)	216, 333, 498, 612, 1503, 1586, 1605, 1700, 1903
BspCNI	CTCAG	3 cut(s)	318, 799, 1147
BspFNI	CGCG	3 cut(s)	219, 300, 644
BspLI	GGNNCC	8 cut(s)	259, 334, 403, 475, 547, 618, 759, 1341
BspMAI	CTGCAG	2 cut(s)	781, 1654
BspPI	GGATC	2 cut(s)	1012, 1634
BspT104I	TTCGAA	3 cut(s)	720, 1433, 1985
BsrBI	CCGCTC	2 cut(s)	1104, 1375
BsrDI	GCAATG	2 cut(s)	736, 1914
BsrFI	RCCGGY	5 cut(s)	504, 608, 833, 1259, 1903
BsrGI	TGTACA	1 cut(s)	1140
BsrI	ACTGG	5 cut(s)	238, 526, 565, 735, 1851
BssAI	RCCGGY	5 cut(s)	504, 608, 833, 1259, 1903
BssMI	GATC	4 cut(s)	448, 1017, 1383, 1639
BssNI	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
BssT1I	CCWWGG	1 cut(s)	1537
Bst2UI	CCWGG	2 cut(s)	212, 500
Bst4CI	ACNGT	6 cut(s)	442, 948, 1066, 1145, 1243, 1430
Bst6I	CTCTTC	2 cut(s)	380, 1241
BstACI	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
BstAUI	TGTACA	1 cut(s)	1140
BstBAI	YACGTR	1 cut(s)	1206
BstBI	TTCGAA	3 cut(s)	720, 1433, 1985
BstC8I	GCNNGC	8 cut(s)	697, 704, 708, 1261, 1654, 1688, 1692, 1905
BstDEI	CTNAG	3 cut(s)	305, 786, 1134
BstDSI	CCRYGG	4 cut(s)	253, 1537, 1695, 1785
BstF5I	GGATG	8 cut(s)	92, 336, 417, 1327, 1756, 1768, 1825, 1840
BstFNI	CGCG	3 cut(s)	219, 300, 644
BstH2I	RGCGCY	1 cut(s)	175
BstHHI	GCGC	1 cut(s)	174
BstKTI	GATC	4 cut(s)	451, 1020, 1386, 1642
BstMAI	GTCTC	4 cut(s)	595, 789, 807, 1595
BstMBI	GATC	4 cut(s)	448, 1017, 1383, 1639
BstMWI	GCNNNNNNNGC	9 cut(s)	204, 213, 225, 306, 514, 543, 1616, 1683, 1780
BstNI	CCWGG	2 cut(s)	212, 500
BstSFI	CTRYAG	2 cut(s)	777, 1650
BstSNI	TACGTA	1 cut(s)	1206
BstUI	CGCG	3 cut(s)	219, 300, 644
BstV1I	GCAGC	2 cut(s)	711, 1165
BstX2I	RGATCY	2 cut(s)	1017, 1639
BstYI	RGATCY	2 cut(s)	1017, 1639
BsuRI	GGCC	9 cut(s)	216, 333, 498, 612, 1503, 1586, 1605, 1700, 1903
BtgI	CCRYGG	4 cut(s)	253, 1537, 1695, 1785
BtrI	CACGTC	1 cut(s)	1792
BtsCI	GGATG	8 cut(s)	92, 336, 417, 1327, 1756, 1768, 1825, 1840
BtsI	GCAGTG	1 cut(s)	774
BtsIMutI	CAGTG	1 cut(s)	774
Cac8I	GCNNGC	8 cut(s)	697, 704, 708, 1261, 1654, 1688, 1692, 1905
CfoI	GCGC	1 cut(s)	174
Cfr10I	RCCGGY	5 cut(s)	504, 608, 833, 1259, 1903
Cfr13I	GGNCC	5 cut(s)	214, 332, 473, 502, 611
Cfr9I	CCCGGG	2 cut(s)	553, 664
Csp6I	GTAC	2 cut(s)	1141, 1207
CviAII	CATG	3 cut(s)	1470, 1538, 1780
CviQI	GTAC	2 cut(s)	1141, 1207
DdeI	CTNAG	3 cut(s)	305, 786, 1134
DpnI	GATC	4 cut(s)	450, 1019, 1385, 1641
DpnII	GATC	4 cut(s)	448, 1017, 1383, 1639
DriI	GACNNNNNGTC	1 cut(s)	646
EaeI	YGGCCR	1 cut(s)	1698
Eam1104I	CTCTTC	2 cut(s)	380, 1241
Eam1105I	GACNNNNNGTC	1 cut(s)	646
EarI	CTCTTC	2 cut(s)	380, 1241
EciI	GGCGGA	3 cut(s)	57, 795, 1187
Ecl136II	GAGCTC	1 cut(s)	1741
Eco105I	TACGTA	1 cut(s)	1206
Eco130I	CCWWGG	1 cut(s)	1537
Eco147I	AGGCCT	2 cut(s)	1503, 1586
Eco24I	GRGCYC	2 cut(s)	672, 1743
Eco47I	GGWCC	2 cut(s)	473, 502
Eco47III	AGCGCT	1 cut(s)	173
Eco53kI	GAGCTC	1 cut(s)	1741
Eco57I	CTGAAG	1 cut(s)	1506
Eco88I	CYCGRG	4 cut(s)	553, 664, 1181, 1667
EcoICRI	GAGCTC	1 cut(s)	1741
EcoRII	CCWGG	2 cut(s)	210, 498
EcoT14I	CCWWGG	1 cut(s)	1537
EcoT38I	GRGCYC	2 cut(s)	672, 1743
ErhI	CCWWGG	1 cut(s)	1537
Esp3I	CGTCTC	1 cut(s)	595
FaeI	CATG	3 cut(s)	1473, 1541, 1783
FalI	AAGNNNNNCTT	2 cut(s)	359, 391
FaqI	GGGAC	7 cut(s)	355, 459, 616, 1213, 1513, 1747, 1873
FatI	CATG	3 cut(s)	1469, 1537, 1779
FauI	CCCGC	3 cut(s)	290, 1097, 1310
FauNDI	CATATG	1 cut(s)	1302
Fnu4HI	GCNGC	9 cut(s)	71, 217, 676, 700, 761, 879, 1154, 1325, 1376
FokI	GGATG	8 cut(s)	79, 323, 404, 1314, 1743, 1755, 1832, 1847
FriOI	GRGCYC	2 cut(s)	672, 1743
Fsp4HI	GCNGC	9 cut(s)	71, 217, 676, 700, 761, 879, 1154, 1325, 1376
FspBI	CTAG	1 cut(s)	1443
GlaI	GCGC	1 cut(s)	173
GluI	GCNGC	9 cut(s)	71, 217, 676, 700, 761, 879, 1154, 1325, 1376
GsaI	CCCAGC	1 cut(s)	767
GsuI	CTGGAG	5 cut(s)	221, 341, 503, 509, 1169
HaeII	RGCGCY	1 cut(s)	175
HaeIII	GGCC	9 cut(s)	216, 333, 498, 612, 1503, 1586, 1605, 1700, 1903
HhaI	GCGC	1 cut(s)	174
Hin1I	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
Hin1II	CATG	3 cut(s)	1473, 1541, 1783
Hin6I	GCGC	1 cut(s)	172
HinP1I	GCGC	1 cut(s)	172
HinfI	GANTC	6 cut(s)	4, 722, 782, 1093, 1646, 1672
HphI	GGTGA	8 cut(s)	430, 502, 954, 1255, 1357, 1393, 1508, 1849
Hpy166II	GTNNAC	3 cut(s)	40, 688, 1754
Hpy188III	TCNNGA	7 cut(s)	269, 358, 482, 1148, 1183, 1643, 1744
Hpy8I	GTNNAC	3 cut(s)	40, 688, 1754
HpyCH4III	ACNGT	6 cut(s)	442, 948, 1066, 1145, 1243, 1430
HpyCH4IV	ACGT	6 cut(s)	588, 1205, 1308, 1791, 1886, 1974
HpyCH4V	TGCA	7 cut(s)	699, 779, 1042, 1459, 1619, 1631, 1652
HpyF10VI	GCNNNNNNNGC	9 cut(s)	204, 213, 225, 306, 514, 543, 1616, 1683, 1780
HpyF3I	CTNAG	3 cut(s)	305, 786, 1134
HpySE526I	ACGT	6 cut(s)	588, 1205, 1308, 1791, 1886, 1974
Hsp92I	GRCGYC	8 cut(s)	102, 198, 752, 837, 849, 1257, 1886, 1974
Hsp92II	CATG	3 cut(s)	1473, 1541, 1783
HspAI	GCGC	1 cut(s)	172
KroI	GCCGGC	2 cut(s)	1259, 1903
KroNI	GCCGGC	2 cut(s)	1261, 1905
Kzo9I	GATC	4 cut(s)	448, 1017, 1383, 1639
Lsp1109I	GCAGC	2 cut(s)	711, 1165
LweI	GCATC	2 cut(s)	1336, 1734
MaeI	CTAG	1 cut(s)	1443
MaeII	ACGT	6 cut(s)	588, 1205, 1308, 1791, 1886, 1974
MaeIII	GTNAC	1 cut(s)	1237
MalI	GATC	4 cut(s)	450, 1019, 1385, 1641
MbiI	CCGCTC	2 cut(s)	1104, 1375
MboI	GATC	4 cut(s)	448, 1017, 1383, 1639
MboII	GAAGA	8 cut(s)	367, 574, 709, 1258, 1489, 1499, 1649, 1936
MflI	RGATCY	2 cut(s)	1017, 1639
MhlI	GDGCHC	4 cut(s)	209, 672, 776, 1743
MluCI	AATT	2 cut(s)	954, 994
MluI	ACGCGT	1 cut(s)	642
MlyI	GAGTC	1 cut(s)	791
MmeI	TCCRAC	4 cut(s)	123, 735, 1074, 1957
MroNI	GCCGGC	2 cut(s)	1259, 1903
MroXI	GAANNNNTTC	1 cut(s)	536
MseI	TTAA	3 cut(s)	578, 597, 1941
MslI	CAYNNNNRTG	1 cut(s)	1790
MspA1I	CMGCKG	4 cut(s)	763, 1138, 1156, 1231
Mva1269I	GAATGC	2 cut(s)	975, 1857
MvaI	CCWGG	2 cut(s)	212, 500
MvnI	CGCG	3 cut(s)	219, 300, 644
MwoI	GCNNNNNNNGC	9 cut(s)	204, 213, 225, 306, 514, 543, 1616, 1683, 1780
NaeI	GCCGGC	2 cut(s)	1261, 1905
NciI	CCSGG	8 cut(s)	554, 555, 614, 634, 665, 666, 692, 1892
NcoI	CCATGG	1 cut(s)	1537
NdeI	CATATG	1 cut(s)	1302
NdeII	GATC	4 cut(s)	448, 1017, 1383, 1639
NgoMIV	GCCGGC	2 cut(s)	1259, 1903
NlaIII	CATG	3 cut(s)	1473, 1541, 1783
NlaIV	GGNNCC	8 cut(s)	259, 334, 403, 475, 547, 618, 759, 1341
NmeAIII	GCCGAG	2 cut(s)	825, 1148
NmuCI	GTSAC	1 cut(s)	1237
NspV	TTCGAA	3 cut(s)	720, 1433, 1985
OliI	CACNNNNGTG	1 cut(s)	1790
PasI	CCCWGGG	1 cut(s)	211
PceI	AGGCCT	2 cut(s)	1503, 1586
PcsI	WCGNNNNNNNCGW	4 cut(s)	33, 174, 228, 879
PctI	GAATGC	2 cut(s)	975, 1857
PdiI	GCCGGC	2 cut(s)	1261, 1905
PdmI	GAANNNNTTC	1 cut(s)	536
PfeI	GAWTC	5 cut(s)	4, 722, 1093, 1646, 1672
PflFI	GACNNNGTC	1 cut(s)	104
PkrI	GCNGC	9 cut(s)	72, 218, 677, 701, 762, 880, 1155, 1326, 1377
PleI	GAGTC	1 cut(s)	790
PpsI	GAGTC	1 cut(s)	790
Ppu21I	YACGTR	1 cut(s)	1206
Psp124BI	GAGCTC	1 cut(s)	1743
Psp6I	CCWGG	2 cut(s)	210, 498
PspFI	CCCAGC	1 cut(s)	763
PspGI	CCWGG	2 cut(s)	210, 498
PspN4I	GGNNCC	8 cut(s)	259, 334, 403, 475, 547, 618, 759, 1341
PspPI	GGNCC	5 cut(s)	214, 332, 473, 502, 611
PstI	CTGCAG	2 cut(s)	781, 1654
PsuI	RGATCY	2 cut(s)	1017, 1639
PsyI	GACNNNGTC	1 cut(s)	104
PvuII	CAGCTG	3 cut(s)	1138, 1156, 1231
RsaI	GTAC	2 cut(s)	1142, 1208
RsaNI	GTAC	2 cut(s)	1141, 1207
RseI	CAYNNNNRTG	1 cut(s)	1790
SacI	GAGCTC	1 cut(s)	1743
SaqAI	TTAA	3 cut(s)	578, 597, 1941
SatI	GCNGC	9 cut(s)	71, 217, 676, 700, 761, 879, 1154, 1325, 1376
Sau3AI	GATC	4 cut(s)	448, 1017, 1383, 1639
Sau96I	GGNCC	5 cut(s)	214, 332, 473, 502, 611
SchI	GAGTC	1 cut(s)	791
SduI	GDGCHC	4 cut(s)	209, 672, 776, 1743
SfaNI	GCATC	2 cut(s)	1336, 1734
SfcI	CTRYAG	2 cut(s)	777, 1650
SfuI	TTCGAA	3 cut(s)	720, 1433, 1985
SinI	GGWCC	2 cut(s)	473, 502
SmaI	CCCGGG	2 cut(s)	555, 666
SmiMI	CAYNNNNRTG	1 cut(s)	1790
SmlI	CTYRAG	4 cut(s)	365, 1497, 1547, 1736
SmoI	CTYRAG	4 cut(s)	365, 1497, 1547, 1736
SnaBI	TACGTA	1 cut(s)	1206
Sse9I	AATT	2 cut(s)	954, 994
SseBI	AGGCCT	2 cut(s)	1503, 1586
SspMI	CTAG	1 cut(s)	1443
SstI	GAGCTC	1 cut(s)	1743
StuI	AGGCCT	2 cut(s)	1503, 1586
StyI	CCWWGG	1 cut(s)	1537
TaaI	ACNGT	6 cut(s)	442, 948, 1066, 1145, 1243, 1430
TaiI	ACGT	6 cut(s)	591, 1208, 1311, 1794, 1889, 1977
TasI	AATT	2 cut(s)	954, 994
TatI	WGTACW	1 cut(s)	1140
TauI	GCSGC	7 cut(s)	73, 219, 678, 763, 881, 1327, 1378
TfiI	GAWTC	5 cut(s)	4, 722, 1093, 1646, 1672
Tru1I	TTAA	3 cut(s)	578, 597, 1941
Tru9I	TTAA	3 cut(s)	578, 597, 1941
TscAI	CASTG	1 cut(s)	781
TseFI	GTSAC	1 cut(s)	1237
TseI	GCWGC	2 cut(s)	699, 1153
Tsp45I	GTSAC	1 cut(s)	1237
TspDTI	ATGAA	1 cut(s)	1650
TspGWI	ACGGA	5 cut(s)	242, 1320, 1610, 1749, 1802
TspMI	CCCGGG	2 cut(s)	553, 664
TspRI	CASTG	1 cut(s)	781
Tth111I	GACNNNGTC	1 cut(s)	104
VpaK11BI	GGWCC	2 cut(s)	473, 502
XmaI	CCCGGG	2 cut(s)	553, 664
XmnI	GAANNNNTTC	1 cut(s)	536
XspI	CTAG	1 cut(s)	1443
ZraI	GACGTC	2 cut(s)	1887, 1975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.