Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0009275

Physical Location & Seq

Genomic Coordinates Reverse (-)

17984134 .. 17988504

Gene Structure 4371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG190400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCCCATCATCACTCTCCTCCTCCTCCTCCTCCTCGCCGCCGCCGTCCACTCCCAACCCCTCTCACCAGACCTCCTCCTCCCCTCCTCCGACGCCGTCGCCCTCCTCTCCTTCAAGTCCCACTCCGACCTCGACAACCGCCTCCTCTACACCCTCAACGAGCCCTTCGACTACTGCCAATGGCAAGGCGTCAAATGCGCCCAGGGCCGCGTCGTCCGCTTCGTCCTCCAGTCCTTCTCCCTCCGCGGCACCCTCGCCCCCCACACCCTCTCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCACAACAACTCCCTCTCCGGTCCCCTCCCCGACCTCTCCTCCCTCTCCAACCTCAAGTCCCTCTTCTTGAACCGCAACTCCTTCTCCGGTTCTTTCCCTCCTTCACTCCTCGCCCTCCACCGCCTCCGTGCCCTTGATCTCTCTCACAACAACTTCACCGGTTCGATCCCCGCTCTCCTGACCCGTCTGGACCGGCTCAACTCCCTCCACCTCGAGTTCAACCGGTTCAACGGCTCCTTCCCGGCTTTGAACCAGTCCTTCCTCACCGACCTCAACGTCTCCTCCAACAACCTCACCGGCCCCGTCCCGGGCACCCCCACTCTCTCCCGCTTCGACAGCACCTCGTTCCAGCTCAACCCCGGCCTCTGCGGCGAGATTATGAACAAGGCCTGCAGCTCACGCTCACCCTTCTTTGAATCCCACAATGCCACCTCGCCGGGGTCGTCGGAGCCTTTAGGGGAGAGTGCGCAGTCACAAGGAGCGGTGGTGCTGTCTCCGCCCTCTCCAACAAGGCACAAGAAAACCGGTCTGGTTCTCGGAATATCAATAGCAGTCGCATTTATGTTTGCTGGTCTCTTATTCGTGTTTGCAGTGATCCGAAACCGAACCTCCGGGACTGAAGCCGAAATTAGACCCTCGAAACCGTCCCCAAGCGAAGACAGGGATCCATATCCATATCCCGCCGCCGTCTCAGTTCAAAAAGAGGAGAGGCCCAAAGTAGTAGTTGCTCATTACGAGGAAGCTCAAACTAGGGTGATACCCAAGAGCGGGAACTTGGTGTTTTGCTATGGGGAGACCCAGTTGTACAGCTTGGAGCAACTGATGAGGGCCTCGGCGGAGTTACTTGGGAGAGGAACCATCGGAACGACGTACAAGGCGGTGCTGGATAACCAGCTGATAGTGACGGTGAAGAGATTGGACGCGAGTAAGACTGCCATTACGAGCAGGGAGGTTTTCGATCAGCATATGGACGCCGTGGGTGGGTTGCGCCACCCCAATTTGGTTCCGGTCAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTGGTCTTGTATGATTACCAAACCAATGGGAGTCTCTTCAATCTCATCCACGGTTCAAGATCGAATAGAGCAAAGCCTCTTCACTGGACGTCGTGCTTGAAGATTGCTGAAGACGTGGCTCAAGGCCTTGCTTACATTCACCAAGCGTCGACGTTGATCCATGGCAATCTCAAATCGTCCAATGTGCTTTTGGGAGCTGACTTTGAGGCCTGTCTCACGGACTACGGTCTGGCTCTGTTTGCAGACTCTTCTGCCAGTGAAGATCCTGAGTCTGCAGGGTATAAAGCTCCTGAGACGAGGAAGTCCAGTCGCCGAGCTACATCCAAGTCAGATGTGTATGCGTATGGCATCCTCTTGCTAGAGCTTTTGACGGGTAAACATCCGTCCCAACATCCTCTGCTTGTTCCCATGGATGTGGGGGATTGGGTTAGGGCGATGAGGGACAATGATGTTGGGGATGATAATCAACTTGGGATGCTGACCGAGGTTGCTTGTATATGTAGTTTGACATCTCCAGAACAGAGACCGGCAATGTGGCAAGTGTTGAAGATGTTACAGGAGATTAAAGAGTGTGTGATGACAGAGGATAATGCAGGTGTTGGATTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

651

Amino Acids

71.19

Weight (kDa)

7.01

Isoelectric Point (pI)

45.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	381 - 578	7.2e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	381 - 632	1.6e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50230 AT3G50230 AT5G67200
fragaria_vesca	FvH4_1g16410
malus_domestica	MD02G1176600.v1.1 MD08G1095300.v1.1
prunus_persica	Prupe.6G231100_v2.0.a1
pyrus_communis	pycom01g08530 pycom02g14290 pycom15g07270
rosa_chinensis	RchiOBHm_Chr2g0106291
rosa_laevigata	RLG00000017486
rosa_multiflora	Rmu_sc0020846.1_g000001 Rmu_sc0021309.1_g000001 Rmu_ssc0000338.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137300
rosa_rugosa	Rorug02G0134500
rosa_samantha	Rh2AG185300 Rh2BG195600 Rh2CG190400 Rh2DG191500
rosa_wichuraiana	Rw2G014470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1928
AasI	GACNNNNNNGTC	2 cut(s)	578, 1645
AatII	GACGTC	1 cut(s)	1436
Acc16I	TGCGCA	1 cut(s)	771
Acc36I	ACCTGC	1 cut(s)	1928
AccB1I	GGYRCC	2 cut(s)	248, 614
AccBSI	CCGCTC	3 cut(s)	476, 785, 1071
AccI	GTMKAC	1 cut(s)	1493
AccII	CGCG	4 cut(s)	210, 246, 291, 1226
AclWI	GGATC	6 cut(s)	463, 892, 962, 975, 1495, 1601
AcuI	CTGAAG	2 cut(s)	942, 1473
AcyI	GRCGYC	4 cut(s)	93, 189, 1275, 1433
AfaI	GTAC	2 cut(s)	1109, 1175
AfiI	CCNNNNNNNGG	7 cut(s)	610, 611, 741, 1070, 1071, 1284, 1303
AgeI	ACCGGT	3 cut(s)	461, 525, 827
AjiI	CACGTC	1 cut(s)	1459
AjnI	CCWGG	1 cut(s)	201
AloI	GAACNNNNNNTCC	2 cut(s)	365, 397
Alw26I	GTCTC	9 cut(s)	586, 801, 881, 997, 1091, 1382, 1562, 1631, 1861
AlwI	GGATC	6 cut(s)	463, 892, 962, 975, 1495, 1601
Ama87I	CYCGRG	2 cut(s)	515, 610
AoxI	GGCC	9 cut(s)	205, 601, 664, 690, 1013, 1131, 1329, 1468, 1551
ApeKI	GCWGC	1 cut(s)	696
AsiGI	ACCGGT	3 cut(s)	461, 525, 827
AspLEI	GCGC	3 cut(s)	200, 772, 1293
AspS9I	GGNCC	6 cut(s)	205, 323, 493, 602, 1014, 1131
AsuC2I	CCSGG	6 cut(s)	545, 611, 612, 663, 741, 916
AsuHPI	GGTGA	8 cut(s)	57, 451, 559, 589, 699, 1069, 1222, 1475
AvaI	CYCGRG	2 cut(s)	515, 610
AvaII	GGWCC	2 cut(s)	323, 493
BaeGI	GKGCMC	2 cut(s)	436, 617
BamHI	GGATCC	1 cut(s)	967
BanI	GGYRCC	2 cut(s)	248, 614
BanII	GRGCYC	1 cut(s)	165
BbsI	GAAGAC	2 cut(s)	966, 1461
BbvCI	CCTCAGC	1 cut(s)	296
BbvI	GCAGC	1 cut(s)	708
BccI	CCATC	2 cut(s)	14, 1169
BceAI	ACGGC	5 cut(s)	29, 80, 550, 974, 1262
BciT130I	CCWGG	1 cut(s)	203
BcnI	CCSGG	6 cut(s)	545, 611, 612, 663, 741, 916
BcoDI	GTCTC	9 cut(s)	586, 801, 881, 997, 1091, 1382, 1562, 1631, 1861
BfaI	CTAG	3 cut(s)	1053, 1703, 1954
BfmI	CTRYAG	2 cut(s)	694, 1617
BfuAI	ACCTGC	1 cut(s)	1928
BglI	GCCNNNNNGGC	1 cut(s)	672
BisI	GCNGC	7 cut(s)	39, 42, 208, 247, 673, 697, 987
BlsI	GCNGC	7 cut(s)	40, 43, 209, 248, 674, 698, 988
Bme1390I	CCNGG	7 cut(s)	203, 545, 611, 612, 663, 741, 916
Bme18I	GGWCC	2 cut(s)	323, 493
BmeT110I	CYCGRG	2 cut(s)	515, 610
BmgBI	CACGTC	1 cut(s)	1459
BmgT120I	GGNCC	6 cut(s)	205, 323, 493, 602, 1014, 1131
BmiI	GGNNCC	9 cut(s)	250, 325, 538, 604, 616, 753, 969, 1159, 1308
BmrFI	CCNGG	7 cut(s)	203, 545, 611, 612, 663, 741, 916
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	2 cut(s)	1701, 1809
BmuI	ACTGGG	1 cut(s)	1096
BoxI	GACNNNNGTC	1 cut(s)	1569
BpiI	GAAGAC	2 cut(s)	966, 1461
BpmI	CTGGAG	2 cut(s)	212, 1842
Bpu10I	CCTNAGC	1 cut(s)	296
BpuEI	CTTGAG	2 cut(s)	341, 1449
BpuMI	CCSGG	6 cut(s)	545, 611, 612, 663, 741, 916
BsaBI	GATNNNNATC	2 cut(s)	972, 1806
BsaHI	GRCGYC	4 cut(s)	93, 189, 1275, 1433
BsaI	GGTCTC	3 cut(s)	881, 1091, 1861
BsaWI	WCCGGW	6 cut(s)	320, 389, 461, 525, 827, 1309
Bsc4I	CCNNNNNNNGG	7 cut(s)	610, 611, 741, 1070, 1071, 1284, 1303
Bse118I	RCCGGY	6 cut(s)	461, 495, 525, 599, 827, 1870
Bse1I	ACTGG	6 cut(s)	229, 556, 1102, 1433, 1599, 1650
Bse3DI	GCAATG	1 cut(s)	1881
Bse8I	GATNNNNATC	2 cut(s)	972, 1806
BseBI	CCWGG	1 cut(s)	203
BseGI	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BseJI	GATNNNNATC	2 cut(s)	972, 1806
BseLI	CCNNNNNNNGG	7 cut(s)	610, 611, 741, 1070, 1071, 1284, 1303
BseMI	GCAATG	1 cut(s)	1881
BseMII	CTCAG	4 cut(s)	310, 1008, 1602, 1626
BseNI	ACTGG	6 cut(s)	229, 556, 1102, 1433, 1599, 1650
BseSI	GKGCMC	2 cut(s)	436, 617
BseXI	GCAGC	1 cut(s)	708
Bsh1236I	CGCG	4 cut(s)	210, 246, 291, 1226
BshFI	GGCC	9 cut(s)	207, 603, 666, 692, 1015, 1133, 1331, 1470, 1553
BshNI	GGYRCC	2 cut(s)	248, 614
BshTI	ACCGGT	3 cut(s)	461, 525, 827
BsiHKCI	CYCGRG	2 cut(s)	515, 610
BslFI	GGGAC	8 cut(s)	103, 309, 346, 593, 931, 934, 1714, 1799
BslI	CCNNNNNNNGG	7 cut(s)	610, 611, 741, 1070, 1071, 1284, 1303
BsmAI	GTCTC	9 cut(s)	586, 801, 881, 997, 1091, 1382, 1562, 1631, 1861
BsmBI	CGTCTC	3 cut(s)	586, 997, 1631
BsmFI	GGGAC	8 cut(s)	103, 309, 346, 593, 931, 934, 1714, 1799
BsnI	GGCC	9 cut(s)	207, 603, 666, 692, 1015, 1133, 1331, 1470, 1553
Bso31I	GGTCTC	3 cut(s)	881, 1091, 1861
BsoBI	CYCGRG	2 cut(s)	515, 610
Bsp1286I	GDGCHC	3 cut(s)	165, 436, 617
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
Bsp19I	CCATGG	2 cut(s)	1504, 1752
BspANI	GGCC	9 cut(s)	207, 603, 666, 692, 1015, 1133, 1331, 1470, 1553
BspCNI	CTCAG	4 cut(s)	309, 1007, 1603, 1627
BspFNI	CGCG	4 cut(s)	210, 246, 291, 1226
BspLI	GGNNCC	9 cut(s)	250, 325, 538, 604, 616, 753, 969, 1159, 1308
BspMAI	CTGCAG	2 cut(s)	698, 1621
BspMI	ACCTGC	1 cut(s)	1928
BspPI	GGATC	6 cut(s)	463, 892, 962, 975, 1495, 1601
BspT107I	GGYRCC	2 cut(s)	248, 614
BspTNI	GGTCTC	3 cut(s)	881, 1091, 1861
BsrBI	CCGCTC	3 cut(s)	476, 785, 1071
BsrDI	GCAATG	1 cut(s)	1881
BsrFI	RCCGGY	6 cut(s)	461, 495, 525, 599, 827, 1870
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	6 cut(s)	229, 556, 1102, 1433, 1599, 1650
BssAI	RCCGGY	6 cut(s)	461, 495, 525, 599, 827, 1870
BssMI	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
BssNI	GRCGYC	4 cut(s)	93, 189, 1275, 1433
BssT1I	CCWWGG	3 cut(s)	1332, 1504, 1752
Bst2UI	CCWGG	1 cut(s)	203
Bst4CI	ACNGT	4 cut(s)	948, 1210, 1397, 1571
Bst6I	CTCTTC	5 cut(s)	371, 1208, 1385, 1428, 1597
BstACI	GRCGYC	4 cut(s)	93, 189, 1275, 1433
BstAUI	TGTACA	1 cut(s)	1107
BstC8I	GCNNGC	1 cut(s)	694
BstDEI	CTNAG	4 cut(s)	296, 994, 1611, 1635
BstDSI	CCRYGG	5 cut(s)	244, 1278, 1393, 1504, 1752
BstF5I	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BstFNI	CGCG	4 cut(s)	210, 246, 291, 1226
BstHHI	GCGC	3 cut(s)	200, 772, 1293
BstKTI	GATC	8 cut(s)	442, 471, 900, 970, 1264, 1406, 1503, 1609
BstMAI	GTCTC	9 cut(s)	586, 801, 881, 997, 1091, 1382, 1562, 1631, 1861
BstMBI	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
BstMWI	GCNNNNNNNGC	9 cut(s)	195, 204, 216, 297, 639, 672, 702, 799, 1583
BstNI	CCWGG	1 cut(s)	203
BstPAI	GACNNNNGTC	1 cut(s)	1569
BstSCI	CCNGG	7 cut(s)	201, 543, 609, 610, 661, 739, 914
BstSFI	CTRYAG	2 cut(s)	694, 1617
BstSLI	GKGCMC	2 cut(s)	436, 617
BstUI	CGCG	4 cut(s)	210, 246, 291, 1226
BstV1I	GCAGC	1 cut(s)	708
BstV2I	GAAGAC	2 cut(s)	966, 1461
BstX2I	RGATCY	2 cut(s)	967, 1606
BstXI	CCANNNNNNTGG	2 cut(s)	1370, 1759
BstYI	RGATCY	2 cut(s)	967, 1606
BsuRI	GGCC	9 cut(s)	207, 603, 666, 692, 1015, 1133, 1331, 1470, 1553
BtgI	CCRYGG	5 cut(s)	244, 1278, 1393, 1504, 1752
BtgZI	GCGATG	1 cut(s)	1793
BtrI	CACGTC	1 cut(s)	1459
BtsCI	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BtsI	GCAGTG	1 cut(s)	900
BtsIMutI	CAGTG	3 cut(s)	900, 1426, 1606
BveI	ACCTGC	1 cut(s)	1928
Cac8I	GCNNGC	1 cut(s)	694
CfoI	GCGC	3 cut(s)	200, 772, 1293
Cfr10I	RCCGGY	6 cut(s)	461, 495, 525, 599, 827, 1870
Cfr13I	GGNCC	6 cut(s)	205, 323, 493, 602, 1014, 1131
Cfr42I	CCGCGG	1 cut(s)	247
Cfr9I	CCCGGG	1 cut(s)	610
CseI	GACGC	7 cut(s)	101, 178, 199, 280, 1232, 1283, 1479
Csp6I	GTAC	2 cut(s)	1108, 1174
CspAI	ACCGGT	3 cut(s)	461, 525, 827
CviAII	CATG	2 cut(s)	1505, 1753
CviQI	GTAC	2 cut(s)	1108, 1174
DdeI	CTNAG	4 cut(s)	296, 994, 1611, 1635
DpnI	GATC	8 cut(s)	441, 470, 899, 969, 1263, 1405, 1502, 1608
DpnII	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
DrdI	GACNNNNNNGTC	2 cut(s)	578, 1645
DseDI	GACNNNNNNGTC	2 cut(s)	578, 1645
Eam1104I	CTCTTC	5 cut(s)	371, 1208, 1385, 1428, 1597
EarI	CTCTTC	5 cut(s)	371, 1208, 1385, 1428, 1597
EciI	GGCGGA	2 cut(s)	789, 1154
Eco130I	CCWWGG	3 cut(s)	1332, 1504, 1752
Eco147I	AGGCCT	3 cut(s)	692, 1470, 1553
Eco24I	GRGCYC	1 cut(s)	165
Eco31I	GGTCTC	3 cut(s)	881, 1091, 1861
Eco47I	GGWCC	2 cut(s)	323, 493
Eco57I	CTGAAG	2 cut(s)	942, 1473
Eco88I	CYCGRG	2 cut(s)	515, 610
EcoO109I	RGGNCCY	1 cut(s)	1131
EcoRII	CCWGG	1 cut(s)	201
EcoT14I	CCWWGG	3 cut(s)	1332, 1504, 1752
EcoT38I	GRGCYC	1 cut(s)	165
ErhI	CCWWGG	3 cut(s)	1332, 1504, 1752
Esp3I	CGTCTC	3 cut(s)	586, 997, 1631
FaeI	CATG	2 cut(s)	1508, 1756
FalI	AAGNNNNNCTT	2 cut(s)	350, 382
FaqI	GGGAC	8 cut(s)	103, 309, 346, 593, 931, 934, 1714, 1799
FatI	CATG	2 cut(s)	1504, 1752
FauI	CCCGC	5 cut(s)	281, 481, 638, 991, 1064
FauNDI	CATATG	1 cut(s)	1269
FblI	GTMKAC	1 cut(s)	1493
Fnu4HI	GCNGC	7 cut(s)	39, 42, 208, 247, 673, 697, 987
FokI	GGATG	8 cut(s)	1376, 1651, 1679, 1710, 1722, 1769, 1814, 1831
FriOI	GRGCYC	1 cut(s)	165
Fsp4HI	GCNGC	7 cut(s)	39, 42, 208, 247, 673, 697, 987
FspBI	CTAG	3 cut(s)	1053, 1703, 1954
FspI	TGCGCA	1 cut(s)	771
GlaI	GCGC	3 cut(s)	199, 771, 1292
GluI	GCNGC	7 cut(s)	39, 42, 208, 247, 673, 697, 987
GsuI	CTGGAG	2 cut(s)	212, 1842
HaeIII	GGCC	9 cut(s)	207, 603, 666, 692, 1015, 1133, 1331, 1470, 1553
HgaI	GACGC	7 cut(s)	101, 178, 199, 280, 1232, 1283, 1479
HhaI	GCGC	3 cut(s)	200, 772, 1293
Hin1I	GRCGYC	4 cut(s)	93, 189, 1275, 1433
Hin1II	CATG	2 cut(s)	1508, 1756
Hin6I	GCGC	3 cut(s)	198, 770, 1291
HinP1I	GCGC	3 cut(s)	198, 770, 1291
HincII	GTYRAC	1 cut(s)	1494
HindII	GTYRAC	1 cut(s)	1494
HinfI	GANTC	4 cut(s)	719, 1375, 1589, 1613
HphI	GGTGA	8 cut(s)	57, 451, 559, 589, 699, 1069, 1222, 1475
Hpy166II	GTNNAC	3 cut(s)	49, 1494, 1721
Hpy188I	TCNGA	7 cut(s)	91, 127, 751, 842, 902, 1166, 1675
Hpy188III	TCNNGA	7 cut(s)	370, 481, 491, 1401, 1610, 1634, 1859
Hpy8I	GTNNAC	3 cut(s)	49, 1494, 1721
Hpy99I	CGWCG	8 cut(s)	95, 101, 215, 751, 1174, 1438, 1495, 1498
HpyAV	CCTTC	8 cut(s)	121, 175, 244, 394, 414, 550, 571, 721
HpyCH4III	ACNGT	4 cut(s)	948, 1210, 1397, 1571
HpyCH4IV	ACGT	5 cut(s)	579, 1172, 1433, 1458, 1496
HpyCH4V	TGCA	5 cut(s)	696, 893, 1586, 1619, 1937
HpyF10VI	GCNNNNNNNGC	9 cut(s)	195, 204, 216, 297, 639, 672, 702, 799, 1583
HpyF3I	CTNAG	4 cut(s)	296, 994, 1611, 1635
HpySE526I	ACGT	5 cut(s)	579, 1172, 1433, 1458, 1496
Hsp92I	GRCGYC	4 cut(s)	93, 189, 1275, 1433
Hsp92II	CATG	2 cut(s)	1508, 1756
HspAI	GCGC	3 cut(s)	198, 770, 1291
KspI	CCGCGG	1 cut(s)	247
Kzo9I	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
LmnI	GCTCC	7 cut(s)	291, 542, 751, 782, 1117, 1538, 1636
Lsp1109I	GCAGC	1 cut(s)	708
LweI	GCATC	2 cut(s)	1701, 1809
MaeI	CTAG	3 cut(s)	1053, 1703, 1954
MaeII	ACGT	5 cut(s)	579, 1172, 1433, 1458, 1496
MaeIII	GTNAC	4 cut(s)	774, 1143, 1204, 1896
MalI	GATC	8 cut(s)	441, 470, 899, 969, 1263, 1405, 1502, 1608
MbiI	CCGCTC	3 cut(s)	476, 785, 1071
MboI	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
MflI	RGATCY	2 cut(s)	967, 1606
MhlI	GDGCHC	3 cut(s)	165, 436, 617
MluCI	AATT	2 cut(s)	930, 1300
MlyI	GAGTC	3 cut(s)	1384, 1583, 1622
MmeI	TCCRAC	7 cut(s)	114, 150, 375, 612, 729, 833, 1924
MseI	TTAA	1 cut(s)	1908
MslI	CAYNNNNRTG	1 cut(s)	1757
MspA1I	CMGCKG	2 cut(s)	246, 1198
MspR9I	CCNGG	7 cut(s)	203, 545, 611, 612, 663, 741, 916
MvaI	CCWGG	1 cut(s)	203
MvnI	CGCG	4 cut(s)	210, 246, 291, 1226
MwoI	GCNNNNNNNGC	9 cut(s)	195, 204, 216, 297, 639, 672, 702, 799, 1583
NciI	CCSGG	6 cut(s)	545, 611, 612, 663, 741, 916
NcoI	CCATGG	2 cut(s)	1504, 1752
NdeI	CATATG	1 cut(s)	1269
NdeII	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
NlaIII	CATG	2 cut(s)	1508, 1756
NlaIV	GGNNCC	9 cut(s)	250, 325, 538, 604, 616, 753, 969, 1159, 1308
NmeAIII	GCCGAG	2 cut(s)	1115, 1682
NmuCI	GTSAC	2 cut(s)	774, 1204
NsbI	TGCGCA	1 cut(s)	771
PaeR7I	CTCGAG	1 cut(s)	515
PaqCI	CACCTGC	1 cut(s)	1928
PasI	CCCWGGG	1 cut(s)	202
PceI	AGGCCT	3 cut(s)	692, 1470, 1553
PcsI	WCGNNNNNNNCGW	4 cut(s)	42, 165, 219, 743
PfeI	GAWTC	1 cut(s)	719
PflFI	GACNNNGTC	1 cut(s)	95
PfoI	TCCNGGA	1 cut(s)	914
PinAI	ACCGGT	3 cut(s)	461, 525, 827
PkrI	GCNGC	7 cut(s)	40, 43, 209, 248, 674, 698, 988
PleI	GAGTC	3 cut(s)	1383, 1583, 1621
PpsI	GAGTC	3 cut(s)	1383, 1583, 1621
PshAI	GACNNNNGTC	1 cut(s)	1569
Psp6I	CCWGG	1 cut(s)	201
PspGI	CCWGG	1 cut(s)	201
PspN4I	GGNNCC	9 cut(s)	250, 325, 538, 604, 616, 753, 969, 1159, 1308
PspPI	GGNCC	6 cut(s)	205, 323, 493, 602, 1014, 1131
PspXI	VCTCGAGB	1 cut(s)	515
PstI	CTGCAG	2 cut(s)	698, 1621
PsuI	RGATCY	2 cut(s)	967, 1606
PsyI	GACNNNGTC	1 cut(s)	95
PvuII	CAGCTG	1 cut(s)	1198
RsaI	GTAC	2 cut(s)	1109, 1175
RsaNI	GTAC	2 cut(s)	1108, 1174
RseI	CAYNNNNRTG	1 cut(s)	1757
SacII	CCGCGG	1 cut(s)	247
SalI	GTCGAC	1 cut(s)	1492
SaqAI	TTAA	1 cut(s)	1908
SatI	GCNGC	7 cut(s)	39, 42, 208, 247, 673, 697, 987
Sau3AI	GATC	8 cut(s)	439, 468, 897, 967, 1261, 1403, 1500, 1606
Sau96I	GGNCC	6 cut(s)	205, 323, 493, 602, 1014, 1131
SchI	GAGTC	3 cut(s)	1384, 1583, 1622
ScrFI	CCNGG	7 cut(s)	203, 545, 611, 612, 663, 741, 916
SduI	GDGCHC	3 cut(s)	165, 436, 617
SfaNI	GCATC	2 cut(s)	1701, 1809
SfcI	CTRYAG	2 cut(s)	694, 1617
Sfr274I	CTCGAG	1 cut(s)	515
Sfr303I	CCGCGG	1 cut(s)	247
SgrBI	CCGCGG	1 cut(s)	247
SgrDI	CGTCGACG	1 cut(s)	1492
SinI	GGWCC	2 cut(s)	323, 493
SlaI	CTCGAG	1 cut(s)	515
SmaI	CCCGGG	1 cut(s)	612
SmiMI	CAYNNNNRTG	1 cut(s)	1757
SmlI	CTYRAG	3 cut(s)	356, 515, 1464
SmoI	CTYRAG	3 cut(s)	356, 515, 1464
Sse9I	AATT	2 cut(s)	930, 1300
SseBI	AGGCCT	3 cut(s)	692, 1470, 1553
SspMI	CTAG	3 cut(s)	1053, 1703, 1954
StuI	AGGCCT	3 cut(s)	692, 1470, 1553
StyD4I	CCNGG	7 cut(s)	201, 543, 609, 610, 661, 739, 914
StyI	CCWWGG	3 cut(s)	1332, 1504, 1752
TaaI	ACNGT	4 cut(s)	948, 1210, 1397, 1571
TaiI	ACGT	5 cut(s)	582, 1175, 1436, 1461, 1499
TaqII	GACCGA	1 cut(s)	1841
TasI	AATT	2 cut(s)	930, 1300
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	6 cut(s)	41, 44, 210, 249, 675, 989
TfiI	GAWTC	1 cut(s)	719
Tru1I	TTAA	1 cut(s)	1908
Tru9I	TTAA	1 cut(s)	1908
TscAI	CASTG	3 cut(s)	900, 1433, 1606
TseFI	GTSAC	2 cut(s)	774, 1204
TseI	GCWGC	1 cut(s)	696
Tsp45I	GTSAC	2 cut(s)	774, 1204
TspDTI	ATGAA	1 cut(s)	698
TspGWI	ACGGA	3 cut(s)	419, 1577, 1716
TspMI	CCCGGG	1 cut(s)	610
TspRI	CASTG	3 cut(s)	900, 1433, 1606
Tth111I	GACNNNGTC	1 cut(s)	95
VpaK11BI	GGWCC	2 cut(s)	323, 493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1531
XhoI	CTCGAG	1 cut(s)	515
XmaI	CCCGGG	1 cut(s)	610
XmiI	GTMKAC	1 cut(s)	1493
XspI	CTAG	3 cut(s)	1053, 1703, 1954
ZraI	GACGTC	1 cut(s)	1434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.