Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009275

Physical Location & Seq

Genomic Coordinates Forward (+)

75046980 .. 75049531

Gene Structure 2552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00137300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGCCCATCATCACTCTCCTCCTCCTCTTCGCCGCCGTCCACTCCTACTCCCAACCCCTCTCACCAAGCCTCCTCCTCCCCTCCTCCGACGCCGTCGCCCTCCTCTCCTTCAAGTCCCACTCCGACCTCGACAACCGCCTCCTCTACACCCTCAACGAGCCCTTCGACTACTGCCAATGGCAAGGCGTCAAATGCGCCCAGGGCCGCGTCGTCCGCTTCGTCCTCCAGTCCTTCTCCCTCCGCGGCACCCTCGCCCCCCACACCCTCTCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCTACAACAACTCCCTCTCCGGTCCCCTCCCCGACCTCTCCTCCCTCTCCAACCTCAAGTCCCTCTTCTTGAACCGCAACTCCTTCTCCGGTTCTTTCCCTCCTTCACTCCTCGCCCTCCACCGCCTCCGTGCCCTTGATCTTTCTCACAACAACTTCACCGGTTCGATCCCCGTTCTCTTGACCGGTCTGGACCGGCTCAACTCCCTCCGCCTCGAGTTCAACCGGTTCAACGGCTCCTTCCCGGCTTTAAACCAGTCCTTCCTCACCGACCTCAACGTCTCCTCCAACAACCTCACCGGCCCGGTCCCGGGCACCCCCACTCTCTCCCGGTTCGACAGCACCTCGTTCCAGCTCAACCCCGGCCTCTGCGGCGAGATTATGAACAAGGCCTGCAGCTCACGCTCACCCTTCTTTGAATCCCACAATGCCACCTCGCCGTCGGAGCCTTTAGGGGAGAGTGCACAGTCACAAGGAGCGGTGGTGCTGTCTCCGCCCTCTCCAACAAGGCACAGGAAAACCGGTCTGGTTCTCGGAATATCAATAGCAGTTGCATTCATGTTTGCTGGTCTCTTATTCGTGTTTGCAGTGATCCGAAACCGAACATCCGGGACTGAAGCCGAAATTAGACCCTCCAAACCGTCCCCAAGTGAAGATAGGGATCCATATCCCGCCGCCGTCTCAGTTCAAAAAGAGGAGAGGCCTAAAGAAGTAGTACCCAAAGTAGTTGCTCATTACGAGGAAGCTCAAACTAGAGTGATACCCAAGAGCGGGAACTTGGTGTTTTGCTATGGGGAGACCCAGTTGTACAGCTTGGAGCAACTGATGAGGGCCTCGGCGGAGTTACTTGGGAGAGGAACCATCGGAACGACGTACAAGGCGGCGCTGGATAACCAGCTGATAGTGACGGTGAAGCGATTGGACGCGAGTAAGACTGCCATTACTAGCAGGGAGGTTTTCAATCAGCATATGGACGCCGTGGGTGGGTTGCGCCACCCCAATTTGGTTCCGGTCAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTGGTCATGTATGATTACCAAACCAATGGGAGTCTCTTCAATCTCATCCACGGTTCAAGATCGAATAGAGCAAAGCCTCTTCACTGGACGTCGTGCTTGAAGATTGCTGAAGACGTGGCTCAAGGCCTTGCTTACATTCACCAAGCGTCGACGTTGATCCATGGCAATCTCAAATCGTCCAATGTGCTTTTGGGAGCTGACTTTGAGGCCTGTCTCACGGACTACGGTCTGGCTCTGTTTGCAGACTCTTCTGCCAGTGAAGATCCTGAGTCTGCAGGTTATAAAGCTCCTGAGACGAGGAAGTCCAGTCGCCGAGCTACATCCAAGTCAGATGTGTATGCCTATGGCATCCTCTTGCTAGAGCTTTTGACGGGTAAACATCCGTCCCAACATCCTTCGCTTGTTCCCATGGATGTGGGGGATTGGGTTAGGGCAATGAGGGACGATGATGTTGGGGATGATAATCAACTTGGGATGCTGACCGAGGTTGCTTGTATATGTAGTTTGACATCTCCAGAACAGAGACCGGCAATGTGGCAAGTGTTGAAGATGTTACAGGAGATTAAAGAGTTTGTGATGACAGAGGATAATGCAGGTGTTGGATTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

650

Amino Acids

71.21

Weight (kDa)

7.25

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	116 - 176	4.8e-06	Leucine rich repeat
Pkinase	PF00069	380 - 578	4.6e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	380 - 631	1.1e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50230 AT3G50230 AT5G67200
fragaria_vesca	FvH4_1g16410
malus_domestica	MD02G1176600.v1.1 MD08G1095300.v1.1
prunus_persica	Prupe.6G231100_v2.0.a1
pyrus_communis	pycom01g08530 pycom02g14290 pycom15g07270
rosa_chinensis	RchiOBHm_Chr2g0106291
rosa_laevigata	RLG00000017486
rosa_multiflora	Rmu_sc0020846.1_g000001 Rmu_sc0021309.1_g000001 Rmu_ssc0000338.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137300
rosa_rugosa	Rorug02G0134500
rosa_samantha	Rh2AG185300 Rh2BG195600 Rh2CG190400 Rh2DG191500
rosa_wichuraiana	Rw2G014470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1623
AarI	CACCTGC	1 cut(s)	1925
AasI	GACNNNNNNGTC	2 cut(s)	575, 1642
AatII	GACGTC	1 cut(s)	1433
Acc36I	ACCTGC	2 cut(s)	1607, 1925
AccB1I	GGYRCC	2 cut(s)	245, 611
AccBSI	CCGCTC	2 cut(s)	776, 1068
AccI	GTMKAC	1 cut(s)	1490
AccII	CGCG	4 cut(s)	207, 243, 288, 1223
AclWI	GGATC	6 cut(s)	460, 883, 953, 966, 1492, 1598
AcuI	CTGAAG	2 cut(s)	933, 1470
AcyI	GRCGYC	4 cut(s)	90, 186, 1272, 1430
AfaI	GTAC	3 cut(s)	1014, 1106, 1172
AfiI	CCNNNNNNNGG	6 cut(s)	607, 608, 1067, 1068, 1281, 1300
AgeI	ACCGGT	4 cut(s)	458, 482, 522, 818
AjiI	CACGTC	1 cut(s)	1456
AjnI	CCWGG	1 cut(s)	198
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	1 cut(s)	763
Alw26I	GTCTC	9 cut(s)	583, 792, 872, 982, 1088, 1379, 1559, 1628, 1858
Alw44I	GTGCAC	1 cut(s)	759
AlwI	GGATC	6 cut(s)	460, 883, 953, 966, 1492, 1598
Ama87I	CYCGRG	2 cut(s)	512, 607
AoxI	GGCC	9 cut(s)	202, 598, 661, 687, 998, 1128, 1326, 1465, 1548
ApaLI	GTGCAC	1 cut(s)	759
ApeKI	GCWGC	1 cut(s)	693
AsiGI	ACCGGT	4 cut(s)	458, 482, 522, 818
AspLEI	GCGC	3 cut(s)	197, 1183, 1290
AspS9I	GGNCC	6 cut(s)	202, 320, 490, 599, 604, 1128
AsuC2I	CCSGG	7 cut(s)	542, 602, 608, 609, 628, 660, 907
AsuHPI	GGTGA	7 cut(s)	54, 448, 556, 586, 696, 1219, 1472
AvaI	CYCGRG	2 cut(s)	512, 607
AvaII	GGWCC	3 cut(s)	320, 490, 604
BaeGI	GKGCMC	3 cut(s)	433, 614, 763
BamHI	GGATCC	1 cut(s)	958
BanI	GGYRCC	2 cut(s)	245, 611
BanII	GRGCYC	1 cut(s)	162
BbsI	GAAGAC	1 cut(s)	1458
Bbv12I	GWGCWC	1 cut(s)	763
BbvCI	CCTCAGC	1 cut(s)	293
BbvI	GCAGC	1 cut(s)	705
BccI	CCATC	2 cut(s)	14, 1166
BceAI	ACGGC	6 cut(s)	20, 77, 547, 721, 959, 1259
BciT130I	CCWGG	1 cut(s)	200
BcnI	CCSGG	7 cut(s)	542, 602, 608, 609, 628, 660, 907
BcoDI	GTCTC	9 cut(s)	583, 792, 872, 982, 1088, 1379, 1559, 1628, 1858
BfaI	CTAG	4 cut(s)	1050, 1242, 1700, 1951
BfmI	CTRYAG	2 cut(s)	691, 1614
BfoI	RGCGCY	1 cut(s)	1184
BfuAI	ACCTGC	2 cut(s)	1607, 1925
BglI	GCCNNNNNGGC	1 cut(s)	669
BisI	GCNGC	7 cut(s)	33, 205, 244, 670, 694, 972, 1179
BlsI	GCNGC	7 cut(s)	34, 206, 245, 671, 695, 973, 1180
Bme1390I	CCNGG	8 cut(s)	200, 542, 602, 608, 609, 628, 660, 907
Bme18I	GGWCC	3 cut(s)	320, 490, 604
BmeT110I	CYCGRG	2 cut(s)	512, 607
BmgBI	CACGTC	1 cut(s)	1456
BmgT120I	GGNCC	6 cut(s)	202, 320, 490, 599, 604, 1128
BmiI	GGNNCC	9 cut(s)	247, 322, 535, 606, 613, 744, 960, 1156, 1305
BmrFI	CCNGG	8 cut(s)	200, 542, 602, 608, 609, 628, 660, 907
BmrI	ACTGGG	1 cut(s)	1093
BmsI	GCATC	2 cut(s)	1698, 1806
BmuI	ACTGGG	1 cut(s)	1093
BoxI	GACNNNNGTC	1 cut(s)	1566
BpiI	GAAGAC	1 cut(s)	1458
BpmI	CTGGAG	2 cut(s)	209, 1839
Bpu10I	CCTNAGC	1 cut(s)	293
BpuEI	CTTGAG	2 cut(s)	338, 1446
BpuMI	CCSGG	7 cut(s)	542, 602, 608, 609, 628, 660, 907
BsaBI	GATNNNNATC	3 cut(s)	957, 963, 1803
BsaHI	GRCGYC	4 cut(s)	90, 186, 1272, 1430
BsaI	GGTCTC	3 cut(s)	872, 1088, 1858
BsaWI	WCCGGW	7 cut(s)	317, 386, 458, 482, 522, 818, 1306
Bsc4I	CCNNNNNNNGG	6 cut(s)	607, 608, 1067, 1068, 1281, 1300
Bse118I	RCCGGY	7 cut(s)	458, 482, 492, 522, 596, 818, 1867
Bse1I	ACTGG	6 cut(s)	226, 553, 1099, 1430, 1596, 1647
Bse3DI	GCAATG	2 cut(s)	1782, 1878
Bse8I	GATNNNNATC	3 cut(s)	957, 963, 1803
BseBI	CCWGG	1 cut(s)	200
BseGI	GGATG	9 cut(s)	902, 1386, 1661, 1689, 1720, 1732, 1759, 1804, 1821
BseJI	GATNNNNATC	3 cut(s)	957, 963, 1803
BseLI	CCNNNNNNNGG	6 cut(s)	607, 608, 1067, 1068, 1281, 1300
BseMI	GCAATG	2 cut(s)	1782, 1878
BseMII	CTCAG	4 cut(s)	307, 993, 1599, 1623
BseNI	ACTGG	6 cut(s)	226, 553, 1099, 1430, 1596, 1647
BseSI	GKGCMC	3 cut(s)	433, 614, 763
BseXI	GCAGC	1 cut(s)	705
Bsh1236I	CGCG	4 cut(s)	207, 243, 288, 1223
BshFI	GGCC	9 cut(s)	204, 600, 663, 689, 1000, 1130, 1328, 1467, 1550
BshNI	GGYRCC	2 cut(s)	245, 611
BshTI	ACCGGT	4 cut(s)	458, 482, 522, 818
BsiHKAI	GWGCWC	1 cut(s)	763
BsiHKCI	CYCGRG	2 cut(s)	512, 607
BslFI	GGGAC	8 cut(s)	100, 306, 343, 590, 922, 925, 1711, 1796
BslI	CCNNNNNNNGG	6 cut(s)	607, 608, 1067, 1068, 1281, 1300
BsmAI	GTCTC	9 cut(s)	583, 792, 872, 982, 1088, 1379, 1559, 1628, 1858
BsmBI	CGTCTC	3 cut(s)	583, 982, 1628
BsmFI	GGGAC	8 cut(s)	100, 306, 343, 590, 922, 925, 1711, 1796
BsmI	GAATGC	1 cut(s)	851
BsnI	GGCC	9 cut(s)	204, 600, 663, 689, 1000, 1130, 1328, 1467, 1550
Bso31I	GGTCTC	3 cut(s)	872, 1088, 1858
BsoBI	CYCGRG	2 cut(s)	512, 607
Bsp1286I	GDGCHC	4 cut(s)	162, 433, 614, 763
Bsp1407I	TGTACA	1 cut(s)	1104
Bsp143I	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
Bsp19I	CCATGG	2 cut(s)	1501, 1749
BspANI	GGCC	9 cut(s)	204, 600, 663, 689, 1000, 1130, 1328, 1467, 1550
BspCNI	CTCAG	4 cut(s)	306, 992, 1600, 1624
BspFNI	CGCG	4 cut(s)	207, 243, 288, 1223
BspLI	GGNNCC	9 cut(s)	247, 322, 535, 606, 613, 744, 960, 1156, 1305
BspMAI	CTGCAG	2 cut(s)	695, 1618
BspMI	ACCTGC	2 cut(s)	1607, 1925
BspPI	GGATC	6 cut(s)	460, 883, 953, 966, 1492, 1598
BspT107I	GGYRCC	2 cut(s)	245, 611
BspTNI	GGTCTC	3 cut(s)	872, 1088, 1858
BsrBI	CCGCTC	2 cut(s)	776, 1068
BsrDI	GCAATG	2 cut(s)	1782, 1878
BsrFI	RCCGGY	7 cut(s)	458, 482, 492, 522, 596, 818, 1867
BsrGI	TGTACA	1 cut(s)	1104
BsrI	ACTGG	6 cut(s)	226, 553, 1099, 1430, 1596, 1647
BssAI	RCCGGY	7 cut(s)	458, 482, 492, 522, 596, 818, 1867
BssMI	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
BssNI	GRCGYC	4 cut(s)	90, 186, 1272, 1430
BssT1I	CCWWGG	3 cut(s)	1329, 1501, 1749
Bst2UI	CCWGG	1 cut(s)	200
Bst4CI	ACNGT	5 cut(s)	765, 939, 1207, 1394, 1568
Bst6I	CTCTTC	5 cut(s)	32, 368, 1382, 1425, 1594
BstACI	GRCGYC	4 cut(s)	90, 186, 1272, 1430
BstAUI	TGTACA	1 cut(s)	1104
BstC8I	GCNNGC	1 cut(s)	691
BstDEI	CTNAG	4 cut(s)	293, 979, 1608, 1632
BstDSI	CCRYGG	5 cut(s)	241, 1275, 1390, 1501, 1749
BstF5I	GGATG	9 cut(s)	902, 1386, 1661, 1689, 1720, 1732, 1759, 1804, 1821
BstFNI	CGCG	4 cut(s)	207, 243, 288, 1223
BstH2I	RGCGCY	1 cut(s)	1184
BstHHI	GCGC	3 cut(s)	197, 1183, 1290
BstKTI	GATC	7 cut(s)	439, 468, 891, 961, 1403, 1500, 1606
BstMAI	GTCTC	9 cut(s)	583, 792, 872, 982, 1088, 1379, 1559, 1628, 1858
BstMBI	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
BstMWI	GCNNNNNNNGC	9 cut(s)	192, 201, 213, 294, 669, 699, 742, 790, 1580
BstNI	CCWGG	1 cut(s)	200
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstSCI	CCNGG	8 cut(s)	198, 540, 600, 606, 607, 626, 658, 905
BstSFI	CTRYAG	2 cut(s)	691, 1614
BstSLI	GKGCMC	3 cut(s)	433, 614, 763
BstUI	CGCG	4 cut(s)	207, 243, 288, 1223
BstV1I	GCAGC	1 cut(s)	705
BstV2I	GAAGAC	1 cut(s)	1458
BstX2I	RGATCY	2 cut(s)	958, 1603
BstXI	CCANNNNNNTGG	2 cut(s)	1367, 1756
BstYI	RGATCY	2 cut(s)	958, 1603
BsuRI	GGCC	9 cut(s)	204, 600, 663, 689, 1000, 1130, 1328, 1467, 1550
BtgI	CCRYGG	5 cut(s)	241, 1275, 1390, 1501, 1749
BtrI	CACGTC	1 cut(s)	1456
BtsCI	GGATG	9 cut(s)	902, 1386, 1661, 1689, 1720, 1732, 1759, 1804, 1821
BtsI	GCAGTG	1 cut(s)	891
BtsIMutI	CAGTG	3 cut(s)	891, 1423, 1603
BveI	ACCTGC	2 cut(s)	1607, 1925
Cac8I	GCNNGC	1 cut(s)	691
CfoI	GCGC	3 cut(s)	197, 1183, 1290
Cfr10I	RCCGGY	7 cut(s)	458, 482, 492, 522, 596, 818, 1867
Cfr13I	GGNCC	6 cut(s)	202, 320, 490, 599, 604, 1128
Cfr42I	CCGCGG	1 cut(s)	244
Cfr9I	CCCGGG	1 cut(s)	607
CseI	GACGC	7 cut(s)	98, 175, 196, 277, 1229, 1280, 1476
Csp6I	GTAC	3 cut(s)	1013, 1105, 1171
CspAI	ACCGGT	4 cut(s)	458, 482, 522, 818
CviAII	CATG	4 cut(s)	856, 1348, 1502, 1750
CviQI	GTAC	3 cut(s)	1013, 1105, 1171
DdeI	CTNAG	4 cut(s)	293, 979, 1608, 1632
DpnI	GATC	7 cut(s)	438, 467, 890, 960, 1402, 1499, 1605
DpnII	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
DraI	TTTAAA	1 cut(s)	549
DrdI	GACNNNNNNGTC	2 cut(s)	575, 1642
DseDI	GACNNNNNNGTC	2 cut(s)	575, 1642
Eam1104I	CTCTTC	5 cut(s)	32, 368, 1382, 1425, 1594
EarI	CTCTTC	5 cut(s)	32, 368, 1382, 1425, 1594
EciI	GGCGGA	3 cut(s)	497, 780, 1151
Eco130I	CCWWGG	3 cut(s)	1329, 1501, 1749
Eco147I	AGGCCT	4 cut(s)	689, 1000, 1467, 1550
Eco24I	GRGCYC	1 cut(s)	162
Eco31I	GGTCTC	3 cut(s)	872, 1088, 1858
Eco47I	GGWCC	3 cut(s)	320, 490, 604
Eco57I	CTGAAG	2 cut(s)	933, 1470
Eco88I	CYCGRG	2 cut(s)	512, 607
EcoO109I	RGGNCCY	1 cut(s)	1128
EcoRII	CCWGG	1 cut(s)	198
EcoT14I	CCWWGG	3 cut(s)	1329, 1501, 1749
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	3 cut(s)	1329, 1501, 1749
Esp3I	CGTCTC	3 cut(s)	583, 982, 1628
FaeI	CATG	4 cut(s)	859, 1351, 1505, 1753
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FaqI	GGGAC	8 cut(s)	100, 306, 343, 590, 922, 925, 1711, 1796
FatI	CATG	4 cut(s)	855, 1347, 1501, 1749
FauI	CCCGC	3 cut(s)	278, 976, 1061
FauNDI	CATATG	1 cut(s)	1266
FblI	GTMKAC	1 cut(s)	1490
Fnu4HI	GCNGC	7 cut(s)	33, 205, 244, 670, 694, 972, 1179
FokI	GGATG	9 cut(s)	889, 1373, 1648, 1676, 1707, 1719, 1766, 1811, 1828
FriOI	GRGCYC	1 cut(s)	162
Fsp4HI	GCNGC	7 cut(s)	33, 205, 244, 670, 694, 972, 1179
FspBI	CTAG	4 cut(s)	1050, 1242, 1700, 1951
GlaI	GCGC	3 cut(s)	196, 1182, 1289
GluI	GCNGC	7 cut(s)	33, 205, 244, 670, 694, 972, 1179
GsuI	CTGGAG	2 cut(s)	209, 1839
HaeII	RGCGCY	1 cut(s)	1184
HaeIII	GGCC	9 cut(s)	204, 600, 663, 689, 1000, 1130, 1328, 1467, 1550
HgaI	GACGC	7 cut(s)	98, 175, 196, 277, 1229, 1280, 1476
HhaI	GCGC	3 cut(s)	197, 1183, 1290
Hin1I	GRCGYC	4 cut(s)	90, 186, 1272, 1430
Hin1II	CATG	4 cut(s)	859, 1351, 1505, 1753
Hin6I	GCGC	3 cut(s)	195, 1181, 1288
HinP1I	GCGC	3 cut(s)	195, 1181, 1288
HincII	GTYRAC	1 cut(s)	1491
HindII	GTYRAC	1 cut(s)	1491
HinfI	GANTC	4 cut(s)	716, 1372, 1586, 1610
HphI	GGTGA	7 cut(s)	54, 448, 556, 586, 696, 1219, 1472
Hpy166II	GTNNAC	4 cut(s)	40, 761, 1491, 1718
Hpy188I	TCNGA	7 cut(s)	88, 124, 742, 833, 893, 1163, 1672
Hpy188III	TCNNGA	7 cut(s)	367, 478, 488, 1398, 1607, 1631, 1856
Hpy8I	GTNNAC	4 cut(s)	40, 761, 1491, 1718
Hpy99I	CGWCG	8 cut(s)	92, 98, 212, 742, 1171, 1435, 1492, 1495
HpyAV	CCTTC	9 cut(s)	118, 172, 241, 391, 411, 547, 568, 718, 1746
HpyCH4III	ACNGT	5 cut(s)	765, 939, 1207, 1394, 1568
HpyCH4IV	ACGT	5 cut(s)	576, 1169, 1430, 1455, 1493
HpyCH4V	TGCA	7 cut(s)	693, 761, 851, 884, 1583, 1616, 1934
HpyF10VI	GCNNNNNNNGC	9 cut(s)	192, 201, 213, 294, 669, 699, 742, 790, 1580
HpyF3I	CTNAG	4 cut(s)	293, 979, 1608, 1632
HpySE526I	ACGT	5 cut(s)	576, 1169, 1430, 1455, 1493
Hsp92I	GRCGYC	4 cut(s)	90, 186, 1272, 1430
Hsp92II	CATG	4 cut(s)	859, 1351, 1505, 1753
HspAI	GCGC	3 cut(s)	195, 1181, 1288
KspI	CCGCGG	1 cut(s)	244
Kzo9I	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
LmnI	GCTCC	7 cut(s)	288, 539, 742, 773, 1114, 1535, 1633
Lsp1109I	GCAGC	1 cut(s)	705
LweI	GCATC	2 cut(s)	1698, 1806
MaeI	CTAG	4 cut(s)	1050, 1242, 1700, 1951
MaeII	ACGT	5 cut(s)	576, 1169, 1430, 1455, 1493
MaeIII	GTNAC	4 cut(s)	765, 1140, 1201, 1893
MalI	GATC	7 cut(s)	438, 467, 890, 960, 1402, 1499, 1605
MbiI	CCGCTC	2 cut(s)	776, 1068
MboI	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
MflI	RGATCY	2 cut(s)	958, 1603
MhlI	GDGCHC	4 cut(s)	162, 433, 614, 763
MluCI	AATT	2 cut(s)	921, 1297
MlyI	GAGTC	3 cut(s)	1381, 1580, 1619
MmeI	TCCRAC	7 cut(s)	111, 147, 372, 609, 720, 824, 1921
MseI	TTAA	2 cut(s)	548, 1905
MslI	CAYNNNNRTG	1 cut(s)	1754
MspA1I	CMGCKG	2 cut(s)	243, 1195
MspR9I	CCNGG	8 cut(s)	200, 542, 602, 608, 609, 628, 660, 907
Mva1269I	GAATGC	1 cut(s)	851
MvaI	CCWGG	1 cut(s)	200
MvnI	CGCG	4 cut(s)	207, 243, 288, 1223
MwoI	GCNNNNNNNGC	9 cut(s)	192, 201, 213, 294, 669, 699, 742, 790, 1580
NciI	CCSGG	7 cut(s)	542, 602, 608, 609, 628, 660, 907
NcoI	CCATGG	2 cut(s)	1501, 1749
NdeI	CATATG	1 cut(s)	1266
NdeII	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
NlaIII	CATG	4 cut(s)	859, 1351, 1505, 1753
NlaIV	GGNNCC	9 cut(s)	247, 322, 535, 606, 613, 744, 960, 1156, 1305
NmeAIII	GCCGAG	2 cut(s)	1112, 1679
NmuCI	GTSAC	2 cut(s)	765, 1201
PaeR7I	CTCGAG	1 cut(s)	512
PaqCI	CACCTGC	1 cut(s)	1925
PasI	CCCWGGG	1 cut(s)	199
PceI	AGGCCT	4 cut(s)	689, 1000, 1467, 1550
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 216
PctI	GAATGC	1 cut(s)	851
PfeI	GAWTC	1 cut(s)	716
PflFI	GACNNNGTC	1 cut(s)	92
PfoI	TCCNGGA	1 cut(s)	905
PinAI	ACCGGT	4 cut(s)	458, 482, 522, 818
PkrI	GCNGC	7 cut(s)	34, 206, 245, 671, 695, 973, 1180
PleI	GAGTC	3 cut(s)	1380, 1580, 1618
PpsI	GAGTC	3 cut(s)	1380, 1580, 1618
PshAI	GACNNNNGTC	1 cut(s)	1566
PsiI	TTATAA	1 cut(s)	1623
Psp6I	CCWGG	1 cut(s)	198
PspGI	CCWGG	1 cut(s)	198
PspN4I	GGNNCC	9 cut(s)	247, 322, 535, 606, 613, 744, 960, 1156, 1305
PspPI	GGNCC	6 cut(s)	202, 320, 490, 599, 604, 1128
PspXI	VCTCGAGB	1 cut(s)	512
PstI	CTGCAG	2 cut(s)	695, 1618
PsuI	RGATCY	2 cut(s)	958, 1603
PsyI	GACNNNGTC	1 cut(s)	92
PvuII	CAGCTG	1 cut(s)	1195
RsaI	GTAC	3 cut(s)	1014, 1106, 1172
RsaNI	GTAC	3 cut(s)	1013, 1105, 1171
RseI	CAYNNNNRTG	1 cut(s)	1754
SacII	CCGCGG	1 cut(s)	244
SalI	GTCGAC	1 cut(s)	1489
SaqAI	TTAA	2 cut(s)	548, 1905
SatI	GCNGC	7 cut(s)	33, 205, 244, 670, 694, 972, 1179
Sau3AI	GATC	7 cut(s)	436, 465, 888, 958, 1400, 1497, 1603
Sau96I	GGNCC	6 cut(s)	202, 320, 490, 599, 604, 1128
SchI	GAGTC	3 cut(s)	1381, 1580, 1619
ScrFI	CCNGG	8 cut(s)	200, 542, 602, 608, 609, 628, 660, 907
SduI	GDGCHC	4 cut(s)	162, 433, 614, 763
SfaNI	GCATC	2 cut(s)	1698, 1806
SfcI	CTRYAG	2 cut(s)	691, 1614
Sfr274I	CTCGAG	1 cut(s)	512
Sfr303I	CCGCGG	1 cut(s)	244
SgrBI	CCGCGG	1 cut(s)	244
SgrDI	CGTCGACG	1 cut(s)	1489
SinI	GGWCC	3 cut(s)	320, 490, 604
SlaI	CTCGAG	1 cut(s)	512
SmaI	CCCGGG	1 cut(s)	609
SmiMI	CAYNNNNRTG	1 cut(s)	1754
SmlI	CTYRAG	3 cut(s)	353, 512, 1461
SmoI	CTYRAG	3 cut(s)	353, 512, 1461
Sse9I	AATT	2 cut(s)	921, 1297
SseBI	AGGCCT	4 cut(s)	689, 1000, 1467, 1550
SspMI	CTAG	4 cut(s)	1050, 1242, 1700, 1951
StuI	AGGCCT	4 cut(s)	689, 1000, 1467, 1550
StyD4I	CCNGG	8 cut(s)	198, 540, 600, 606, 607, 626, 658, 905
StyI	CCWWGG	3 cut(s)	1329, 1501, 1749
TaaI	ACNGT	5 cut(s)	765, 939, 1207, 1394, 1568
TaiI	ACGT	5 cut(s)	579, 1172, 1433, 1458, 1496
TaqI	TCGA	8 cut(s)	129, 165, 276, 464, 513, 633, 1403, 1490
TaqII	GACCGA	1 cut(s)	1838
TasI	AATT	2 cut(s)	921, 1297
TatI	WGTACW	1 cut(s)	1104
TauI	GCSGC	6 cut(s)	35, 207, 246, 672, 974, 1181
TfiI	GAWTC	1 cut(s)	716
Tru1I	TTAA	2 cut(s)	548, 1905
Tru9I	TTAA	2 cut(s)	548, 1905
TscAI	CASTG	3 cut(s)	891, 1430, 1603
TseFI	GTSAC	2 cut(s)	765, 1201
TseI	GCWGC	1 cut(s)	693
Tsp45I	GTSAC	2 cut(s)	765, 1201
TspDTI	ATGAA	2 cut(s)	695, 844
TspGWI	ACGGA	3 cut(s)	416, 1574, 1713
TspMI	CCCGGG	1 cut(s)	607
TspRI	CASTG	3 cut(s)	891, 1430, 1603
Tth111I	GACNNNGTC	1 cut(s)	92
VneI	GTGCAC	1 cut(s)	759
VpaK11BI	GGWCC	3 cut(s)	320, 490, 604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1528
XhoI	CTCGAG	1 cut(s)	512
XmaI	CCCGGG	1 cut(s)	607
XmiI	GTMKAC	1 cut(s)	1490
XspI	CTAG	4 cut(s)	1050, 1242, 1700, 1951
ZraI	GACGTC	1 cut(s)	1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.