Rmu_sc0020846.1_g000001
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020846.1
OG0009275
Physical Location & Seq
Forward (+)
1 .. 666
666 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020846.1_g000001.1.cds

Sequence Viewer

Length: 666 bp
tttgaatcccacaatgccacctccccgggctcgtcggagcctttaggggagagcgcacagtcacaaggagcggtggtgctgtctccgccctctccaacaaggcacaacaaaaccggtctggttctcggaatatcaatagcagtcgcatttatgtttgctggtctcttattcgtgtttgcagtgatccgaaaccgaacgtccgggactgaagccgaaattagaccctcgaaaccgtccccaagtgaagacagggatccatatcccgccgccgtctcggttcaaaaagaggagaggcccaaagtagttgctcattacgaggaagctcaaactagagtgatacccaagagcgggaacttggtgttttgctatggggagacccagttgtacagcttggagcaactgatgagggcctccgcggagttacttgggagaggaaccatcggaacgacgtacaaggcggtgctggataaccagctgatagtgacggtgaagagattggacgcgagtaagactgccattacgaccagggaggttttcgatcagcatatggacgccgtcggtgggctgcgccaccccaatttggtgccggtcagggcttattttcaggccaagggagagaggctggtcttgtatgattaccaaaccaatgggagtctcttcaatctc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

222

Amino Acids

24.24

Weight (kDa)

8.03

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 583
AccBSI CCGCTC 2 cut(s) 71, 348
AccII CGCG 2 cut(s) 416, 503
AciI CCGC 8 cut(s) 71, 86, 264, 267, 348, 414, 416, 458
AclWI GGATC 3 cut(s) 178, 248, 261
AcuI CTGAAG 1 cut(s) 228
AcyI GRCGYC 1 cut(s) 552
AfaI GTAC 2 cut(s) 386, 452
AfiI CCNNNNNNNGG 4 cut(s) 347, 348, 561, 580
AgeI ACCGGT 1 cut(s) 113
AgsI TTSAA 3 cut(s) 5, 281, 661
AjnI CCWGG 1 cut(s) 524
AluBI AGCT 3 cut(s) 323, 390, 475
AluI AGCT 3 cut(s) 323, 390, 475
Alw26I GTCTC 5 cut(s) 87, 167, 277, 368, 659
AlwI GGATC 3 cut(s) 178, 248, 261
Ama87I CYCGRG 1 cut(s) 25
AoxI GGCC 3 cut(s) 293, 408, 606
ApeKI GCWGC 1 cut(s) 565
AsiGI ACCGGT 1 cut(s) 113
AspLEI GCGC 2 cut(s) 56, 570
AspS9I GGNCC 2 cut(s) 294, 408
AsuC2I CCSGG 3 cut(s) 26, 27, 202
AsuHPI GGTGA 1 cut(s) 499
AvaI CYCGRG 1 cut(s) 25
BamHI GGATCC 1 cut(s) 253
BanI GGYRCC 1 cut(s) 583
BanII GRGCYC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 252
BbvI GCAGC 1 cut(s) 552
BccI CCATC 1 cut(s) 446
BceAI ACGGC 2 cut(s) 254, 539
BciT130I CCWGG 1 cut(s) 526
BcnI CCSGG 3 cut(s) 26, 27, 202
BcoDI GTCTC 5 cut(s) 87, 167, 277, 368, 659
BfaI CTAG 1 cut(s) 330
BisI GCNGC 2 cut(s) 267, 566
BlsI GCNGC 2 cut(s) 268, 567
Bme1390I CCNGG 4 cut(s) 26, 27, 202, 526
BmeT110I CYCGRG 1 cut(s) 25
BmgT120I GGNCC 2 cut(s) 294, 408
BmiI GGNNCC 4 cut(s) 39, 255, 436, 585
BmrFI CCNGG 4 cut(s) 26, 27, 202, 526
BmrI ACTGGG 1 cut(s) 373
BmuI ACTGGG 1 cut(s) 373
BpiI GAAGAC 1 cut(s) 252
BpuMI CCSGG 3 cut(s) 26, 27, 202
BsaBI GATNNNNATC 1 cut(s) 258
BsaHI GRCGYC 1 cut(s) 552
BsaI GGTCTC 2 cut(s) 167, 368
BsaJI CCNNGG 5 cut(s) 24, 25, 414, 525, 609
BsaWI WCCGGW 1 cut(s) 113
BsaXI ACNNNNNCTCC 4 cut(s) 60, 90, 365, 395
Bsc4I CCNNNNNNNGG 4 cut(s) 347, 348, 561, 580
Bse118I RCCGGY 2 cut(s) 113, 586
Bse1I ACTGG 1 cut(s) 379
Bse8I GATNNNNATC 1 cut(s) 258
BseBI CCWGG 1 cut(s) 526
BseDI CCNNGG 5 cut(s) 24, 25, 414, 525, 609
BseJI GATNNNNATC 1 cut(s) 258
BseLI CCNNNNNNNGG 4 cut(s) 347, 348, 561, 580
BseNI ACTGG 1 cut(s) 379
BseRI GAGGAG 1 cut(s) 302
BseXI GCAGC 1 cut(s) 552
Bsh1236I CGCG 2 cut(s) 416, 503
BshFI GGCC 3 cut(s) 295, 410, 608
BshNI GGYRCC 1 cut(s) 583
BshTI ACCGGT 1 cut(s) 113
BsiHKCI CYCGRG 1 cut(s) 25
BsiSI CCGG 4 cut(s) 26, 114, 201, 587
BslFI GGGAC 2 cut(s) 217, 220
BslI CCNNNNNNNGG 4 cut(s) 347, 348, 561, 580
BsmAI GTCTC 5 cut(s) 87, 167, 277, 368, 659
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 2 cut(s) 217, 220
BsnI GGCC 3 cut(s) 295, 410, 608
Bso31I GGTCTC 2 cut(s) 167, 368
BsoBI CYCGRG 1 cut(s) 25
Bsp1286I GDGCHC 1 cut(s) 32
Bsp1407I TGTACA 1 cut(s) 384
Bsp143I GATC 3 cut(s) 183, 253, 538
BspACI CCGC 8 cut(s) 71, 86, 264, 267, 348, 414, 416, 458
BspANI GGCC 3 cut(s) 295, 410, 608
BspFNI CGCG 2 cut(s) 416, 503
BspLI GGNNCC 4 cut(s) 39, 255, 436, 585
BspPI GGATC 3 cut(s) 178, 248, 261
BspT107I GGYRCC 1 cut(s) 583
BspTNI GGTCTC 2 cut(s) 167, 368
BsrBI CCGCTC 2 cut(s) 71, 348
BsrFI RCCGGY 2 cut(s) 113, 586
BsrGI TGTACA 1 cut(s) 384
BsrI ACTGG 1 cut(s) 379
BssAI RCCGGY 2 cut(s) 113, 586
BssECI CCNNGG 5 cut(s) 24, 25, 414, 525, 609
BssMI GATC 3 cut(s) 183, 253, 538
BssNI GRCGYC 1 cut(s) 552
BssT1I CCWWGG 1 cut(s) 609
Bst2UI CCWGG 1 cut(s) 526
Bst4CI ACNGT 3 cut(s) 60, 234, 487
Bst6I CTCTTC 2 cut(s) 485, 662
BstACI GRCGYC 1 cut(s) 552
BstAUI TGTACA 1 cut(s) 384
BstDSI CCRYGG 1 cut(s) 414
BstFNI CGCG 2 cut(s) 416, 503
BstHHI GCGC 2 cut(s) 56, 570
BstKTI GATC 3 cut(s) 186, 256, 541
BstMAI GTCTC 5 cut(s) 87, 167, 277, 368, 659
BstMBI GATC 3 cut(s) 183, 253, 538
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNI CCWGG 1 cut(s) 526
BstSCI CCNGG 4 cut(s) 24, 25, 200, 524
BstUI CGCG 2 cut(s) 416, 503
BstV1I GCAGC 1 cut(s) 552
BstV2I GAAGAC 1 cut(s) 252
BstX2I RGATCY 1 cut(s) 253
BstXI CCANNNNNNTGG 1 cut(s) 647
BstYI RGATCY 1 cut(s) 253
BsuRI GGCC 3 cut(s) 295, 410, 608
BtgI CCRYGG 1 cut(s) 414
BtsI GCAGTG 1 cut(s) 186
BtsIMutI CAGTG 1 cut(s) 186
CfoI GCGC 2 cut(s) 56, 570
Cfr10I RCCGGY 2 cut(s) 113, 586
Cfr13I GGNCC 2 cut(s) 294, 408
Cfr42I CCGCGG 1 cut(s) 417
Cfr9I CCCGGG 1 cut(s) 25
CseI GACGC 2 cut(s) 509, 560
Csp6I GTAC 2 cut(s) 385, 451
CspAI ACCGGT 1 cut(s) 113
CviQI GTAC 2 cut(s) 385, 451
DpnI GATC 3 cut(s) 185, 255, 540
DpnII GATC 3 cut(s) 183, 253, 538
Eam1104I CTCTTC 2 cut(s) 485, 662
EarI CTCTTC 2 cut(s) 485, 662
EciI GGCGGA 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 609
Eco24I GRGCYC 1 cut(s) 32
Eco31I GGTCTC 2 cut(s) 167, 368
Eco57I CTGAAG 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 408
EcoRII CCWGG 1 cut(s) 524
EcoT14I CCWWGG 1 cut(s) 609
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 1 cut(s) 609
Esp3I CGTCTC 1 cut(s) 277
FaiI YATR 6 cut(s) 152, 259, 369, 546, 548, 633
FaqI GGGAC 2 cut(s) 217, 220
FauI CCCGC 2 cut(s) 271, 341
FauNDI CATATG 1 cut(s) 546
Fnu4HI GCNGC 2 cut(s) 267, 566
FriOI GRGCYC 1 cut(s) 32
Fsp4HI GCNGC 2 cut(s) 267, 566
FspBI CTAG 1 cut(s) 330
GlaI GCGC 2 cut(s) 55, 569
GluI GCNGC 2 cut(s) 267, 566
HaeIII GGCC 3 cut(s) 295, 410, 608
HapII CCGG 4 cut(s) 26, 114, 201, 587
HgaI GACGC 2 cut(s) 509, 560
HhaI GCGC 2 cut(s) 56, 570
Hin1I GRCGYC 1 cut(s) 552
Hin6I GCGC 2 cut(s) 54, 568
HinP1I GCGC 2 cut(s) 54, 568
HinfI GANTC 2 cut(s) 5, 652
HpaII CCGG 4 cut(s) 26, 114, 201, 587
HphI GGTGA 1 cut(s) 499
Hpy188I TCNGA 4 cut(s) 37, 128, 188, 443
Hpy99I CGWCG 3 cut(s) 37, 451, 560
HpyCH4III ACNGT 3 cut(s) 60, 234, 487
HpyCH4IV ACGT 2 cut(s) 197, 449
HpyCH4V TGCA 1 cut(s) 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpySE526I ACGT 2 cut(s) 197, 449
Hsp92I GRCGYC 1 cut(s) 552
HspAI GCGC 2 cut(s) 54, 568
KspI CCGCGG 1 cut(s) 417
Kzo9I GATC 3 cut(s) 183, 253, 538
LmnI GCTCC 3 cut(s) 37, 68, 394
Lsp1109I GCAGC 1 cut(s) 552
MaeI CTAG 1 cut(s) 330
MaeII ACGT 2 cut(s) 197, 449
MaeIII GTNAC 3 cut(s) 60, 420, 481
MalI GATC 3 cut(s) 185, 255, 540
MbiI CCGCTC 2 cut(s) 71, 348
MboI GATC 3 cut(s) 183, 253, 538
MboII GAAGA 3 cut(s) 257, 502, 649
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 1 cut(s) 32
MluCI AATT 2 cut(s) 216, 577
MlyI GAGTC 1 cut(s) 661
MmeI TCCRAC 2 cut(s) 15, 119
MspA1I CMGCKG 2 cut(s) 416, 475
MspI CCGG 4 cut(s) 26, 114, 201, 587
MspR9I CCNGG 4 cut(s) 26, 27, 202, 526
MvaI CCWGG 1 cut(s) 526
MvnI CGCG 2 cut(s) 416, 503
MwoI GCNNNNNNNGC 1 cut(s) 85
NciI CCSGG 3 cut(s) 26, 27, 202
NdeI CATATG 1 cut(s) 546
NdeII GATC 3 cut(s) 183, 253, 538
NlaIV GGNNCC 4 cut(s) 39, 255, 436, 585
NmuCI GTSAC 2 cut(s) 60, 481
PfeI GAWTC 1 cut(s) 5
PflFI GACNNNGTC 1 cut(s) 554
PfoI TCCNGGA 1 cut(s) 200
PinAI ACCGGT 1 cut(s) 113
PkrI GCNGC 2 cut(s) 268, 567
PleI GAGTC 1 cut(s) 660
PpsI GAGTC 1 cut(s) 660
Psp6I CCWGG 1 cut(s) 524
PspGI CCWGG 1 cut(s) 524
PspN4I GGNNCC 4 cut(s) 39, 255, 436, 585
PspPI GGNCC 2 cut(s) 294, 408
PsuI RGATCY 1 cut(s) 253
PsyI GACNNNGTC 1 cut(s) 554
PvuII CAGCTG 1 cut(s) 475
RsaI GTAC 2 cut(s) 386, 452
RsaNI GTAC 2 cut(s) 385, 451
SacII CCGCGG 1 cut(s) 417
SatI GCNGC 2 cut(s) 267, 566
Sau3AI GATC 3 cut(s) 183, 253, 538
Sau96I GGNCC 2 cut(s) 294, 408
SchI GAGTC 1 cut(s) 661
ScrFI CCNGG 4 cut(s) 26, 27, 202, 526
SduI GDGCHC 1 cut(s) 32
SetI ASST 7 cut(s) 23, 200, 325, 392, 452, 477, 534
Sfr303I CCGCGG 1 cut(s) 417
SgrBI CCGCGG 1 cut(s) 417
SmaI CCCGGG 1 cut(s) 27
Sse9I AATT 2 cut(s) 216, 577
SsiI CCGC 8 cut(s) 71, 86, 264, 267, 348, 414, 416, 458
SspMI CTAG 1 cut(s) 330
StyD4I CCNGG 4 cut(s) 24, 25, 200, 524
StyI CCWWGG 1 cut(s) 609
TaaI ACNGT 3 cut(s) 60, 234, 487
TaiI ACGT 2 cut(s) 200, 452
TaqI TCGA 2 cut(s) 227, 537
TasI AATT 2 cut(s) 216, 577
TatI WGTACW 1 cut(s) 384
TauI GCSGC 1 cut(s) 269
TfiI GAWTC 1 cut(s) 5
TscAI CASTG 1 cut(s) 186
TseFI GTSAC 2 cut(s) 60, 481
TseI GCWGC 1 cut(s) 565
Tsp45I GTSAC 2 cut(s) 60, 481
TspMI CCCGGG 1 cut(s) 25
TspRI CASTG 1 cut(s) 186
Tth111I GACNNNGTC 1 cut(s) 554
XmaI CCCGGG 1 cut(s) 25
XspI CTAG 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.