Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009275

Physical Location & Seq

Genomic Coordinates Reverse (-)

17420577 .. 17423484

Gene Structure 2908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG191500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGCCCATCATCACTCTCCTCCTCCTGCTCCTCCTCGCCGCCGCCGTCCAGTCCCACTCCCAAACCCTCTCACCAGACCTCCTCCTCCCCTCCTCCGACGCCGTCGCCCTCCTCTCCTTCAAGTCCCACTCCGACCTCGACAACCGCCTCCTCTACACCCTCAACGAGCCCTTCGACTACTGCCAATGGCAAGGCGTCAAATGCGCCCAGGGCCGCGTCGTCCGCTTCGTCCTCCAGTCCTTCTCCCTCCGCGGCACCCTCGCCCCCCACACCCTCTCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCACAACAACTCCCTCTCCGGTCCCCTCCCCGACCTCTCCTCCCTCTCCAACCTCAAGTCCCTCTTCTTGAACCGCAACTCCTTCTCCGGTTCTTTCCCTCCTTCACTCCTCGCCCTCCACCGCCTCCGTGCCCTTGATCTCTCTCACAACAACTTCACCGGTTCGATCCCCGCTCTCCTGACCCGTCTGGACCGGCTCAACTCCCTCCACCTCGAGTTCAACCGGTTCAACGGCTCCTTCCCGGCTTTGAACCAGTCCTTCCTCACCGACCTCAACGTCTCCTCCAACAACCTCACCGGCCCCGTCCCGGGCACCCCCACTCTCTCCCGCTTCGACAGCACCTCGTTCCAGCTCAACCCCGGCCTCTGCGGCGAGATTATGAACAAGGCCTGCAGCTCACGCTCACCCTTCTTTGAATCCCACAATGCCACCTCGCCGGGGTCGTCGGAGCCTTTAGGGGAGAGTGCGCAGTCACAAGGAGCGGTGGTGCTGTCTCCGCCCTCTCCAACAAGGCACAAGAAAACCGGTCTGGTTCTCGGAATATCAATAGCAGTCGCATTTATGTTTGCTGGTCTCTTATTCGTGTTTGCAGTGATCCGAAACCGAACGTCCGGGACTGAAGCCGAAATTAGACCCTCGAAACCGTCCCCAAGTGAAGACAGGGATCCATATCCCGCCGCCGTCTCAGTTCAAAAAGAGGAGAGGCCCAAAGTAGTAGTTGCTCATTACGAGGAAGCTCAAACTAGGGTGATACCCAAGAGCGGGAACTTGGTGTTTTGCTATGGGGAGACCCAGTTGTACAGCTTGGAGCAACTGATGAGGGCCTCGGCGGAGTTACTTGGGAGAGGAACCATCGGAACGACGTACAAGGCGGTGCTGGATAACCAGCTGATAGTGACGGTGAAGAGATTGGACGCGAGTAAGACTGCCATTACTAGCAGGGAGGTTTTCGATCAGCATATGGACGCCGTGGGTGGGTTGCGCCACCCCAATTTGGTTCCGGTCAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTGGTCTTGTATGATTACCAAACCAATGGGAGTCTCTTCAATCTCATCCACGGTTCAAGATCGAATAGAGCAAAGCCTCTTCACTGGACGTCGTGCTTGAAGATTGCTGAAGACGTGGCTCAAGGCCTTGCTTACATTCACCAAGCGTCGACGTTGATCCATGGCAATCTCAAATCGTCCAATGTGCTTTTGGGAGCTGACTTTGAGGCCTGTCTCACGGACTACGGTCTGGCTCTGTTTGCAGACTCTTCTGCCAGTGAAGATCCTGAGTCTGCAGGGTATAAAGCTCCTGAGACGAGGAAGTCCAGTCGCCGAGCTACATCCAAGTCAGATGTGTACGCGTATGGCATCCTCTTGCTAGAGCTTTTGACGGGTAAACATCCGTCCCAACATCCTCTGCTTGTTCCCATGGATGTGGGGGATTGGGTTAGGGCGATGAGGGACAATGATGTTGGGGATGATAATCAACTTGGGATGCTGACCGAGGTTGCTTGTATATGTAGTTTGACATCTCCAGAACAGAGACCGGCAATGTGGCAAGTGTTGAAGATGTTACAGGAGATTAAAGAGTGTGTGATGACAGAGGATAATGCAGGTGTTGGATTTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

651

Amino Acids

71.15

Weight (kDa)

7.01

Isoelectric Point (pI)

45.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	381 - 578	7.2e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	381 - 632	1.6e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009275)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50230 AT3G50230 AT5G67200
fragaria_vesca	FvH4_1g16410
malus_domestica	MD02G1176600.v1.1 MD08G1095300.v1.1
prunus_persica	Prupe.6G231100_v2.0.a1
pyrus_communis	pycom01g08530 pycom02g14290 pycom15g07270
rosa_chinensis	RchiOBHm_Chr2g0106291
rosa_laevigata	RLG00000017486
rosa_multiflora	Rmu_sc0020846.1_g000001 Rmu_sc0021309.1_g000001 Rmu_ssc0000338.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137300
rosa_rugosa	Rorug02G0134500
rosa_samantha	Rh2AG185300 Rh2BG195600 Rh2CG190400 Rh2DG191500
rosa_wichuraiana	Rw2G014470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1928
AasI	GACNNNNNNGTC	2 cut(s)	584, 1645
AatII	GACGTC	1 cut(s)	1436
Acc16I	TGCGCA	1 cut(s)	777
Acc36I	ACCTGC	1 cut(s)	1928
AccB1I	GGYRCC	2 cut(s)	254, 620
AccBSI	CCGCTC	3 cut(s)	482, 791, 1071
AccI	GTMKAC	1 cut(s)	1493
AccII	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
AclWI	GGATC	6 cut(s)	469, 898, 968, 981, 1495, 1601
AcuI	CTGAAG	2 cut(s)	948, 1473
AcyI	GRCGYC	4 cut(s)	99, 195, 1275, 1433
AfaI	GTAC	3 cut(s)	1109, 1175, 1682
AfiI	CCNNNNNNNGG	7 cut(s)	616, 617, 747, 1070, 1071, 1284, 1303
AflIII	ACRYGT	1 cut(s)	1683
AgeI	ACCGGT	3 cut(s)	467, 531, 833
AjiI	CACGTC	1 cut(s)	1459
AjnI	CCWGG	1 cut(s)	207
AloI	GAACNNNNNNTCC	2 cut(s)	371, 403
Alw26I	GTCTC	9 cut(s)	592, 807, 887, 997, 1091, 1382, 1562, 1631, 1861
AlwI	GGATC	6 cut(s)	469, 898, 968, 981, 1495, 1601
Ama87I	CYCGRG	2 cut(s)	521, 616
AoxI	GGCC	9 cut(s)	211, 607, 670, 696, 1013, 1131, 1329, 1468, 1551
ApeKI	GCWGC	1 cut(s)	702
AsiGI	ACCGGT	3 cut(s)	467, 531, 833
AspLEI	GCGC	3 cut(s)	206, 778, 1293
AspS9I	GGNCC	6 cut(s)	211, 329, 499, 608, 1014, 1131
AsuC2I	CCSGG	6 cut(s)	551, 617, 618, 669, 747, 922
AsuHPI	GGTGA	8 cut(s)	63, 457, 565, 595, 705, 1069, 1222, 1475
AvaI	CYCGRG	2 cut(s)	521, 616
AvaII	GGWCC	2 cut(s)	329, 499
BaeGI	GKGCMC	2 cut(s)	442, 623
BamHI	GGATCC	1 cut(s)	973
BanI	GGYRCC	2 cut(s)	254, 620
BanII	GRGCYC	1 cut(s)	171
BbsI	GAAGAC	2 cut(s)	972, 1461
BbvCI	CCTCAGC	1 cut(s)	302
BbvI	GCAGC	1 cut(s)	714
BccI	CCATC	2 cut(s)	14, 1169
BceAI	ACGGC	5 cut(s)	29, 86, 556, 974, 1262
BciT130I	CCWGG	1 cut(s)	209
BcnI	CCSGG	6 cut(s)	551, 617, 618, 669, 747, 922
BcoDI	GTCTC	9 cut(s)	592, 807, 887, 997, 1091, 1382, 1562, 1631, 1861
BfaI	CTAG	4 cut(s)	1053, 1245, 1703, 1954
BfmI	CTRYAG	2 cut(s)	700, 1617
BfuAI	ACCTGC	1 cut(s)	1928
BglI	GCCNNNNNGGC	1 cut(s)	678
BisI	GCNGC	7 cut(s)	39, 42, 214, 253, 679, 703, 987
BlsI	GCNGC	7 cut(s)	40, 43, 215, 254, 680, 704, 988
Bme1390I	CCNGG	7 cut(s)	209, 551, 617, 618, 669, 747, 922
Bme18I	GGWCC	2 cut(s)	329, 499
BmeT110I	CYCGRG	2 cut(s)	521, 616
BmgBI	CACGTC	1 cut(s)	1459
BmgT120I	GGNCC	6 cut(s)	211, 329, 499, 608, 1014, 1131
BmiI	GGNNCC	9 cut(s)	256, 331, 544, 610, 622, 759, 975, 1159, 1308
BmrFI	CCNGG	7 cut(s)	209, 551, 617, 618, 669, 747, 922
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	2 cut(s)	1701, 1809
BmuI	ACTGGG	1 cut(s)	1096
BoxI	GACNNNNGTC	1 cut(s)	1569
BpiI	GAAGAC	2 cut(s)	972, 1461
BpmI	CTGGAG	2 cut(s)	218, 1842
Bpu10I	CCTNAGC	1 cut(s)	302
BpuEI	CTTGAG	2 cut(s)	347, 1449
BpuMI	CCSGG	6 cut(s)	551, 617, 618, 669, 747, 922
BsaBI	GATNNNNATC	2 cut(s)	978, 1806
BsaHI	GRCGYC	4 cut(s)	99, 195, 1275, 1433
BsaI	GGTCTC	3 cut(s)	887, 1091, 1861
BsaWI	WCCGGW	6 cut(s)	326, 395, 467, 531, 833, 1309
Bsc4I	CCNNNNNNNGG	7 cut(s)	616, 617, 747, 1070, 1071, 1284, 1303
Bse118I	RCCGGY	6 cut(s)	467, 501, 531, 605, 833, 1870
Bse1I	ACTGG	7 cut(s)	49, 235, 562, 1102, 1433, 1599, 1650
Bse3DI	GCAATG	1 cut(s)	1881
Bse8I	GATNNNNATC	2 cut(s)	978, 1806
BseBI	CCWGG	1 cut(s)	209
BseGI	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BseJI	GATNNNNATC	2 cut(s)	978, 1806
BseLI	CCNNNNNNNGG	7 cut(s)	616, 617, 747, 1070, 1071, 1284, 1303
BseMI	GCAATG	1 cut(s)	1881
BseMII	CTCAG	4 cut(s)	316, 1008, 1602, 1626
BseNI	ACTGG	7 cut(s)	49, 235, 562, 1102, 1433, 1599, 1650
BseSI	GKGCMC	2 cut(s)	442, 623
BseXI	GCAGC	1 cut(s)	714
Bsh1236I	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
BshFI	GGCC	9 cut(s)	213, 609, 672, 698, 1015, 1133, 1331, 1470, 1553
BshNI	GGYRCC	2 cut(s)	254, 620
BshTI	ACCGGT	3 cut(s)	467, 531, 833
BsiHKCI	CYCGRG	2 cut(s)	521, 616
BslFI	GGGAC	9 cut(s)	37, 109, 315, 352, 599, 937, 940, 1714, 1799
BslI	CCNNNNNNNGG	7 cut(s)	616, 617, 747, 1070, 1071, 1284, 1303
BsmAI	GTCTC	9 cut(s)	592, 807, 887, 997, 1091, 1382, 1562, 1631, 1861
BsmBI	CGTCTC	3 cut(s)	592, 997, 1631
BsmFI	GGGAC	9 cut(s)	37, 109, 315, 352, 599, 937, 940, 1714, 1799
BsnI	GGCC	9 cut(s)	213, 609, 672, 698, 1015, 1133, 1331, 1470, 1553
Bso31I	GGTCTC	3 cut(s)	887, 1091, 1861
BsoBI	CYCGRG	2 cut(s)	521, 616
Bsp1286I	GDGCHC	3 cut(s)	171, 442, 623
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
Bsp19I	CCATGG	2 cut(s)	1504, 1752
BspANI	GGCC	9 cut(s)	213, 609, 672, 698, 1015, 1133, 1331, 1470, 1553
BspCNI	CTCAG	4 cut(s)	315, 1007, 1603, 1627
BspFNI	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
BspLI	GGNNCC	9 cut(s)	256, 331, 544, 610, 622, 759, 975, 1159, 1308
BspMAI	CTGCAG	2 cut(s)	704, 1621
BspMI	ACCTGC	1 cut(s)	1928
BspPI	GGATC	6 cut(s)	469, 898, 968, 981, 1495, 1601
BspT107I	GGYRCC	2 cut(s)	254, 620
BspTNI	GGTCTC	3 cut(s)	887, 1091, 1861
BsrBI	CCGCTC	3 cut(s)	482, 791, 1071
BsrDI	GCAATG	1 cut(s)	1881
BsrFI	RCCGGY	6 cut(s)	467, 501, 531, 605, 833, 1870
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	7 cut(s)	49, 235, 562, 1102, 1433, 1599, 1650
BssAI	RCCGGY	6 cut(s)	467, 501, 531, 605, 833, 1870
BssMI	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
BssNI	GRCGYC	4 cut(s)	99, 195, 1275, 1433
BssT1I	CCWWGG	3 cut(s)	1332, 1504, 1752
Bst2UI	CCWGG	1 cut(s)	209
Bst4CI	ACNGT	4 cut(s)	954, 1210, 1397, 1571
Bst6I	CTCTTC	5 cut(s)	377, 1208, 1385, 1428, 1597
BstACI	GRCGYC	4 cut(s)	99, 195, 1275, 1433
BstAUI	TGTACA	1 cut(s)	1107
BstC8I	GCNNGC	1 cut(s)	700
BstDEI	CTNAG	4 cut(s)	302, 994, 1611, 1635
BstDSI	CCRYGG	5 cut(s)	250, 1278, 1393, 1504, 1752
BstF5I	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BstFNI	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
BstHHI	GCGC	3 cut(s)	206, 778, 1293
BstKTI	GATC	8 cut(s)	448, 477, 906, 976, 1264, 1406, 1503, 1609
BstMAI	GTCTC	9 cut(s)	592, 807, 887, 997, 1091, 1382, 1562, 1631, 1861
BstMBI	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
BstMWI	GCNNNNNNNGC	9 cut(s)	201, 210, 222, 303, 645, 678, 708, 805, 1583
BstNI	CCWGG	1 cut(s)	209
BstPAI	GACNNNNGTC	1 cut(s)	1569
BstSCI	CCNGG	7 cut(s)	207, 549, 615, 616, 667, 745, 920
BstSFI	CTRYAG	2 cut(s)	700, 1617
BstSLI	GKGCMC	2 cut(s)	442, 623
BstUI	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
BstV1I	GCAGC	1 cut(s)	714
BstV2I	GAAGAC	2 cut(s)	972, 1461
BstX2I	RGATCY	2 cut(s)	973, 1606
BstXI	CCANNNNNNTGG	2 cut(s)	1370, 1759
BstYI	RGATCY	2 cut(s)	973, 1606
BsuRI	GGCC	9 cut(s)	213, 609, 672, 698, 1015, 1133, 1331, 1470, 1553
BtgI	CCRYGG	5 cut(s)	250, 1278, 1393, 1504, 1752
BtgZI	GCGATG	1 cut(s)	1793
BtrI	CACGTC	1 cut(s)	1459
BtsCI	GGATG	8 cut(s)	1389, 1664, 1692, 1723, 1735, 1762, 1807, 1824
BtsI	GCAGTG	1 cut(s)	906
BtsIMutI	CAGTG	3 cut(s)	906, 1426, 1606
BveI	ACCTGC	1 cut(s)	1928
Cac8I	GCNNGC	1 cut(s)	700
CfoI	GCGC	3 cut(s)	206, 778, 1293
Cfr10I	RCCGGY	6 cut(s)	467, 501, 531, 605, 833, 1870
Cfr13I	GGNCC	6 cut(s)	211, 329, 499, 608, 1014, 1131
Cfr42I	CCGCGG	1 cut(s)	253
Cfr9I	CCCGGG	1 cut(s)	616
CseI	GACGC	7 cut(s)	107, 184, 205, 286, 1232, 1283, 1479
Csp6I	GTAC	3 cut(s)	1108, 1174, 1681
CspAI	ACCGGT	3 cut(s)	467, 531, 833
CviAII	CATG	2 cut(s)	1505, 1753
CviQI	GTAC	3 cut(s)	1108, 1174, 1681
DdeI	CTNAG	4 cut(s)	302, 994, 1611, 1635
DpnI	GATC	8 cut(s)	447, 476, 905, 975, 1263, 1405, 1502, 1608
DpnII	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
DrdI	GACNNNNNNGTC	2 cut(s)	584, 1645
DseDI	GACNNNNNNGTC	2 cut(s)	584, 1645
Eam1104I	CTCTTC	5 cut(s)	377, 1208, 1385, 1428, 1597
EarI	CTCTTC	5 cut(s)	377, 1208, 1385, 1428, 1597
EciI	GGCGGA	2 cut(s)	795, 1154
Eco130I	CCWWGG	3 cut(s)	1332, 1504, 1752
Eco147I	AGGCCT	3 cut(s)	698, 1470, 1553
Eco24I	GRGCYC	1 cut(s)	171
Eco31I	GGTCTC	3 cut(s)	887, 1091, 1861
Eco47I	GGWCC	2 cut(s)	329, 499
Eco57I	CTGAAG	2 cut(s)	948, 1473
Eco88I	CYCGRG	2 cut(s)	521, 616
EcoO109I	RGGNCCY	1 cut(s)	1131
EcoRII	CCWGG	1 cut(s)	207
EcoT14I	CCWWGG	3 cut(s)	1332, 1504, 1752
EcoT38I	GRGCYC	1 cut(s)	171
ErhI	CCWWGG	3 cut(s)	1332, 1504, 1752
Esp3I	CGTCTC	3 cut(s)	592, 997, 1631
FaeI	CATG	2 cut(s)	1508, 1756
FalI	AAGNNNNNCTT	2 cut(s)	356, 388
FaqI	GGGAC	9 cut(s)	37, 109, 315, 352, 599, 937, 940, 1714, 1799
FatI	CATG	2 cut(s)	1504, 1752
FauI	CCCGC	5 cut(s)	287, 487, 644, 991, 1064
FauNDI	CATATG	1 cut(s)	1269
FblI	GTMKAC	1 cut(s)	1493
Fnu4HI	GCNGC	7 cut(s)	39, 42, 214, 253, 679, 703, 987
FokI	GGATG	8 cut(s)	1376, 1651, 1679, 1710, 1722, 1769, 1814, 1831
FriOI	GRGCYC	1 cut(s)	171
Fsp4HI	GCNGC	7 cut(s)	39, 42, 214, 253, 679, 703, 987
FspBI	CTAG	4 cut(s)	1053, 1245, 1703, 1954
FspI	TGCGCA	1 cut(s)	777
GlaI	GCGC	3 cut(s)	205, 777, 1292
GluI	GCNGC	7 cut(s)	39, 42, 214, 253, 679, 703, 987
GsuI	CTGGAG	2 cut(s)	218, 1842
HaeIII	GGCC	9 cut(s)	213, 609, 672, 698, 1015, 1133, 1331, 1470, 1553
HgaI	GACGC	7 cut(s)	107, 184, 205, 286, 1232, 1283, 1479
HhaI	GCGC	3 cut(s)	206, 778, 1293
Hin1I	GRCGYC	4 cut(s)	99, 195, 1275, 1433
Hin1II	CATG	2 cut(s)	1508, 1756
Hin6I	GCGC	3 cut(s)	204, 776, 1291
HinP1I	GCGC	3 cut(s)	204, 776, 1291
HincII	GTYRAC	1 cut(s)	1494
HindII	GTYRAC	1 cut(s)	1494
HinfI	GANTC	4 cut(s)	725, 1375, 1589, 1613
HphI	GGTGA	8 cut(s)	63, 457, 565, 595, 705, 1069, 1222, 1475
Hpy166II	GTNNAC	3 cut(s)	1494, 1681, 1721
Hpy188I	TCNGA	7 cut(s)	97, 133, 757, 848, 908, 1166, 1675
Hpy188III	TCNNGA	7 cut(s)	376, 487, 497, 1401, 1610, 1634, 1859
Hpy8I	GTNNAC	3 cut(s)	1494, 1681, 1721
Hpy99I	CGWCG	8 cut(s)	101, 107, 221, 757, 1174, 1438, 1495, 1498
HpyAV	CCTTC	8 cut(s)	127, 181, 250, 400, 420, 556, 577, 727
HpyCH4III	ACNGT	4 cut(s)	954, 1210, 1397, 1571
HpyCH4IV	ACGT	6 cut(s)	585, 917, 1172, 1433, 1458, 1496
HpyCH4V	TGCA	5 cut(s)	702, 899, 1586, 1619, 1937
HpyF10VI	GCNNNNNNNGC	9 cut(s)	201, 210, 222, 303, 645, 678, 708, 805, 1583
HpyF3I	CTNAG	4 cut(s)	302, 994, 1611, 1635
HpySE526I	ACGT	6 cut(s)	585, 917, 1172, 1433, 1458, 1496
Hsp92I	GRCGYC	4 cut(s)	99, 195, 1275, 1433
Hsp92II	CATG	2 cut(s)	1508, 1756
HspAI	GCGC	3 cut(s)	204, 776, 1291
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
LmnI	GCTCC	8 cut(s)	33, 297, 548, 757, 788, 1117, 1538, 1636
Lsp1109I	GCAGC	1 cut(s)	714
LweI	GCATC	2 cut(s)	1701, 1809
MaeI	CTAG	4 cut(s)	1053, 1245, 1703, 1954
MaeII	ACGT	6 cut(s)	585, 917, 1172, 1433, 1458, 1496
MaeIII	GTNAC	4 cut(s)	780, 1143, 1204, 1896
MalI	GATC	8 cut(s)	447, 476, 905, 975, 1263, 1405, 1502, 1608
MbiI	CCGCTC	3 cut(s)	482, 791, 1071
MboI	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
MflI	RGATCY	2 cut(s)	973, 1606
MhlI	GDGCHC	3 cut(s)	171, 442, 623
MluCI	AATT	2 cut(s)	936, 1300
MluI	ACGCGT	1 cut(s)	1683
MlyI	GAGTC	3 cut(s)	1384, 1583, 1622
MmeI	TCCRAC	7 cut(s)	120, 156, 381, 618, 735, 839, 1924
MseI	TTAA	1 cut(s)	1908
MslI	CAYNNNNRTG	1 cut(s)	1757
MspA1I	CMGCKG	2 cut(s)	252, 1198
MspR9I	CCNGG	7 cut(s)	209, 551, 617, 618, 669, 747, 922
MvaI	CCWGG	1 cut(s)	209
MvnI	CGCG	5 cut(s)	216, 252, 297, 1226, 1685
MwoI	GCNNNNNNNGC	9 cut(s)	201, 210, 222, 303, 645, 678, 708, 805, 1583
NciI	CCSGG	6 cut(s)	551, 617, 618, 669, 747, 922
NcoI	CCATGG	2 cut(s)	1504, 1752
NdeI	CATATG	1 cut(s)	1269
NdeII	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
NlaIII	CATG	2 cut(s)	1508, 1756
NlaIV	GGNNCC	9 cut(s)	256, 331, 544, 610, 622, 759, 975, 1159, 1308
NmeAIII	GCCGAG	2 cut(s)	1115, 1682
NmuCI	GTSAC	2 cut(s)	780, 1204
NsbI	TGCGCA	1 cut(s)	777
PaeR7I	CTCGAG	1 cut(s)	521
PaqCI	CACCTGC	1 cut(s)	1928
PasI	CCCWGGG	1 cut(s)	208
PceI	AGGCCT	3 cut(s)	698, 1470, 1553
PcsI	WCGNNNNNNNCGW	4 cut(s)	42, 171, 225, 749
PfeI	GAWTC	1 cut(s)	725
PflFI	GACNNNGTC	1 cut(s)	101
PfoI	TCCNGGA	1 cut(s)	920
PinAI	ACCGGT	3 cut(s)	467, 531, 833
PkrI	GCNGC	7 cut(s)	40, 43, 215, 254, 680, 704, 988
PleI	GAGTC	3 cut(s)	1383, 1583, 1621
PpsI	GAGTC	3 cut(s)	1383, 1583, 1621
PshAI	GACNNNNGTC	1 cut(s)	1569
Psp6I	CCWGG	1 cut(s)	207
PspGI	CCWGG	1 cut(s)	207
PspN4I	GGNNCC	9 cut(s)	256, 331, 544, 610, 622, 759, 975, 1159, 1308
PspPI	GGNCC	6 cut(s)	211, 329, 499, 608, 1014, 1131
PspXI	VCTCGAGB	1 cut(s)	521
PstI	CTGCAG	2 cut(s)	704, 1621
PsuI	RGATCY	2 cut(s)	973, 1606
PsyI	GACNNNGTC	1 cut(s)	101
PvuII	CAGCTG	1 cut(s)	1198
RsaI	GTAC	3 cut(s)	1109, 1175, 1682
RsaNI	GTAC	3 cut(s)	1108, 1174, 1681
RseI	CAYNNNNRTG	1 cut(s)	1757
SacII	CCGCGG	1 cut(s)	253
SalI	GTCGAC	1 cut(s)	1492
SaqAI	TTAA	1 cut(s)	1908
SatI	GCNGC	7 cut(s)	39, 42, 214, 253, 679, 703, 987
Sau3AI	GATC	8 cut(s)	445, 474, 903, 973, 1261, 1403, 1500, 1606
Sau96I	GGNCC	6 cut(s)	211, 329, 499, 608, 1014, 1131
SchI	GAGTC	3 cut(s)	1384, 1583, 1622
ScrFI	CCNGG	7 cut(s)	209, 551, 617, 618, 669, 747, 922
SduI	GDGCHC	3 cut(s)	171, 442, 623
SfaNI	GCATC	2 cut(s)	1701, 1809
SfcI	CTRYAG	2 cut(s)	700, 1617
Sfr274I	CTCGAG	1 cut(s)	521
Sfr303I	CCGCGG	1 cut(s)	253
SgrBI	CCGCGG	1 cut(s)	253
SgrDI	CGTCGACG	1 cut(s)	1492
SinI	GGWCC	2 cut(s)	329, 499
SlaI	CTCGAG	1 cut(s)	521
SmaI	CCCGGG	1 cut(s)	618
SmiMI	CAYNNNNRTG	1 cut(s)	1757
SmlI	CTYRAG	3 cut(s)	362, 521, 1464
SmoI	CTYRAG	3 cut(s)	362, 521, 1464
Sse9I	AATT	2 cut(s)	936, 1300
SseBI	AGGCCT	3 cut(s)	698, 1470, 1553
SspMI	CTAG	4 cut(s)	1053, 1245, 1703, 1954
StuI	AGGCCT	3 cut(s)	698, 1470, 1553
StyD4I	CCNGG	7 cut(s)	207, 549, 615, 616, 667, 745, 920
StyI	CCWWGG	3 cut(s)	1332, 1504, 1752
TaaI	ACNGT	4 cut(s)	954, 1210, 1397, 1571
TaiI	ACGT	6 cut(s)	588, 920, 1175, 1436, 1461, 1499
TaqII	GACCGA	1 cut(s)	1841
TasI	AATT	2 cut(s)	936, 1300
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	6 cut(s)	41, 44, 216, 255, 681, 989
TfiI	GAWTC	1 cut(s)	725
Tru1I	TTAA	1 cut(s)	1908
Tru9I	TTAA	1 cut(s)	1908
TscAI	CASTG	3 cut(s)	906, 1433, 1606
TseFI	GTSAC	2 cut(s)	780, 1204
TseI	GCWGC	1 cut(s)	702
Tsp45I	GTSAC	2 cut(s)	780, 1204
TspDTI	ATGAA	1 cut(s)	704
TspGWI	ACGGA	3 cut(s)	425, 1577, 1716
TspMI	CCCGGG	1 cut(s)	616
TspRI	CASTG	3 cut(s)	906, 1433, 1606
Tth111I	GACNNNGTC	1 cut(s)	101
VpaK11BI	GGWCC	2 cut(s)	329, 499
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1531
XhoI	CTCGAG	1 cut(s)	521
XmaI	CCCGGG	1 cut(s)	616
XmiI	GTMKAC	1 cut(s)	1493
XspI	CTAG	4 cut(s)	1053, 1245, 1703, 1954
ZraI	GACGTC	1 cut(s)	1434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.