pycom02g15050

Catalyzes the synthesis of activated sulfate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0010698
Physical Location & Seq
Forward (+)
11769291 .. 11770829
1539 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 465 bp
ATGAGAGGAAAGCTCACCTACATCCTTGATGGTGACAATGTTCGTCACGGTCTAAATCGTGATCGATCCTTTAGTTTCAAAGCAGAAGATCGTGCAGAAAACATACGAAGAATTGCCGAGGTAGCTAAGCTCTTTGCGGATGCTGGTATCATTTGTATTGCTAGCTTAATATCTCCCTACAGAAAGGACCGAGATGCCTGCCGTGCACTATTTCCCCAAGGAGATTTTATTGAGGTGTACATGGACGTGCCGCTGCATGTGTGTGAGAATAGGGACCCAAAGGGACTGTACAAGCTTGCACGAGCTGGAAAAATTAAAAGCTTTACAGGGGTTGATGATCCATATGAGCCACCATTAAAGTGCGAGATGGTATTGCAGCAGAAGGGTGGGGATTGTGTCTCCCCAGGCGAGATGGCTGAAACCGTGATATCATATTTGGACGAGAAAGGGTATCTGCAGGCATGA

Protein Analysis

155

Amino Acids

17.31

Weight (kDa)

6.14

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
APS_kinase PF01583 2 - 125 4.7e-53 Adenylylsulphate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G39940
fragaria_vesca FvH4_1g17660 FvH4_1g17660
malus_domestica MD02G1185400.v1.1 MD15G1297000.v1.1
prunus_persica Prupe.6G221200_v2.0.a1
pyrus_communis pycom02g15040 pycom02g15050 pycom15g26000
rosa_chinensis RchiOBHm_Chr2g0107981
rosa_laevigata RLG00000017631
rosa_multiflora Rmu_sc0001484.1_g000028
rosa_roxburghii Rroxscaffold_2G00135760
rosa_rugosa Rorug02G0149200 Rorug02G0149300 Rorug02G0149300
rosa_samantha Rh2BG211300 Rh2CG203100 Rh2DG206100
rosa_wichuraiana Rw2G015750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 137, 251
AclWI GGATC 2 cut(s) 60, 332
AfaI GTAC 2 cut(s) 239, 290
AgsI TTSAA 1 cut(s) 79
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 1 cut(s) 403
AluBI AGCT 7 cut(s) 13, 125, 130, 165, 295, 305, 321
AluI AGCT 7 cut(s) 13, 125, 130, 165, 295, 305, 321
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 403
Alw44I GTGCAC 1 cut(s) 204
AlwI GGATC 2 cut(s) 60, 332
ApaLI GTGCAC 1 cut(s) 204
ApeKI GCWGC 2 cut(s) 253, 376
AspS9I GGNCC 2 cut(s) 187, 274
AsuHPI GGTGA 2 cut(s) 7, 44
AsuNHI GCTAGC 1 cut(s) 161
AvaII GGWCC 2 cut(s) 187, 274
BaeGI GKGCMC 1 cut(s) 208
BauI CACGAG 1 cut(s) 300
Bbv12I GWGCWC 1 cut(s) 208
BbvI GCAGC 2 cut(s) 240, 388
BccI CCATC 3 cut(s) 23, 361, 406
BceAI ACGGC 1 cut(s) 186
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BciT130I CCWGG 1 cut(s) 405
BcoDI GTCTC 1 cut(s) 403
BfaI CTAG 1 cut(s) 162
BfmI CTRYAG 2 cut(s) 178, 455
BisI GCNGC 3 cut(s) 251, 254, 377
BlpI GCTNAGC 1 cut(s) 126
BlsI GCNGC 3 cut(s) 252, 255, 378
Bme1390I CCNGG 1 cut(s) 405
Bme18I GGWCC 2 cut(s) 187, 274
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 2 cut(s) 187, 274
BmiI GGNNCC 2 cut(s) 275, 276
BmrFI CCNGG 1 cut(s) 405
BmsI GCATC 2 cut(s) 130, 184
BmtI GCTAGC 1 cut(s) 165
BplI GAGNNNNNCTC 1 cut(s) 29
Bpu1102I GCTNAGC 1 cut(s) 126
Bsa29I ATCGAT 1 cut(s) 64
BsaJI CCNNGG 3 cut(s) 117, 217, 403
BseBI CCWGG 1 cut(s) 405
BseCI ATCGAT 1 cut(s) 64
BseDI CCNNGG 3 cut(s) 117, 217, 403
BseGI GGATG 2 cut(s) 21, 145
BseSI GKGCMC 1 cut(s) 208
BseXI GCAGC 2 cut(s) 240, 388
BsgI GTGCAG 1 cut(s) 114
BshVI ATCGAT 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 208
BslFI GGGAC 2 cut(s) 287, 297
BsmAI GTCTC 1 cut(s) 403
BsmFI GGGAC 2 cut(s) 287, 297
Bsp1286I GDGCHC 1 cut(s) 208
Bsp1407I TGTACA 2 cut(s) 237, 288
Bsp143I GATC 4 cut(s) 61, 65, 88, 337
Bsp1720I GCTNAGC 1 cut(s) 126
BspACI CCGC 2 cut(s) 137, 251
BspDI ATCGAT 1 cut(s) 64
BspLI GGNNCC 2 cut(s) 275, 276
BspMAI CTGCAG 1 cut(s) 459
BspOI GCTAGC 1 cut(s) 165
BspPI GGATC 2 cut(s) 60, 332
BsrGI TGTACA 2 cut(s) 237, 288
BssECI CCNNGG 3 cut(s) 117, 217, 403
BssMI GATC 4 cut(s) 61, 65, 88, 337
BssSI CACGAG 1 cut(s) 300
BssT1I CCWWGG 1 cut(s) 217
Bst2BI CACGAG 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 3 cut(s) 50, 288, 424
BstAUI TGTACA 2 cut(s) 237, 288
BstC8I GCNNGC 4 cut(s) 163, 199, 297, 459
BstDEI CTNAG 1 cut(s) 126
BstF5I GGATG 2 cut(s) 21, 145
BstKTI GATC 4 cut(s) 64, 68, 91, 340
BstMAI GTCTC 1 cut(s) 403
BstMBI GATC 4 cut(s) 61, 65, 88, 337
BstMWI GCNNNNNNNGC 2 cut(s) 122, 203
BstNI CCWGG 1 cut(s) 405
BstNSI RCATGY 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 403
BstSFI CTRYAG 2 cut(s) 178, 455
BstSLI GKGCMC 1 cut(s) 208
BstV1I GCAGC 2 cut(s) 240, 388
Bsu15I ATCGAT 1 cut(s) 64
BsuTUI ATCGAT 1 cut(s) 64
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 2 cut(s) 21, 145
Cac8I GCNNGC 4 cut(s) 163, 199, 297, 459
Cfr13I GGNCC 2 cut(s) 187, 274
ClaI ATCGAT 1 cut(s) 64
Csp6I GTAC 2 cut(s) 238, 289
CviAII CATG 3 cut(s) 241, 257, 462
CviJI RGCY 9 cut(s) 13, 125, 130, 165, 295, 305, 321, 349, 416
CviKI_1 RGCY 9 cut(s) 13, 125, 130, 165, 295, 305, 321, 349, 416
CviQI GTAC 2 cut(s) 238, 289
DdeI CTNAG 1 cut(s) 126
DpnI GATC 4 cut(s) 63, 67, 90, 339
DpnII GATC 4 cut(s) 61, 65, 88, 337
Eco130I CCWWGG 1 cut(s) 217
Eco32I GATATC 1 cut(s) 429
Eco47I GGWCC 2 cut(s) 187, 274
EcoO109I RGGNCCY 1 cut(s) 274
EcoRII CCWGG 1 cut(s) 403
EcoRV GATATC 1 cut(s) 429
EcoT14I CCWWGG 1 cut(s) 217
ErhI CCWWGG 1 cut(s) 217
FaeI CATG 3 cut(s) 244, 260, 465
FaiI YATR 7 cut(s) 104, 242, 258, 343, 345, 433, 463
FaqI GGGAC 2 cut(s) 287, 297
FatI CATG 3 cut(s) 240, 256, 461
FauNDI CATATG 1 cut(s) 343
Fnu4HI GCNGC 3 cut(s) 251, 254, 377
FokI GGATG 2 cut(s) 8, 152
Fsp4HI GCNGC 3 cut(s) 251, 254, 377
FspBI CTAG 1 cut(s) 162
GluI GCNGC 3 cut(s) 251, 254, 377
Hin1II CATG 3 cut(s) 244, 260, 465
HindIII AAGCTT 2 cut(s) 293, 319
HphI GGTGA 2 cut(s) 7, 44
Hpy166II GTNNAC 2 cut(s) 206, 238
Hpy188III TCNNGA 1 cut(s) 59
Hpy8I GTNNAC 2 cut(s) 206, 238
HpyAV CCTTC 1 cut(s) 376
HpyCH4III ACNGT 3 cut(s) 50, 288, 424
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 6 cut(s) 95, 206, 256, 299, 376, 457
HpyF10VI GCNNNNNNNGC 2 cut(s) 122, 203
HpyF3I CTNAG 1 cut(s) 126
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 3 cut(s) 244, 260, 465
KflI GGGWCCC 1 cut(s) 274
Kzo9I GATC 4 cut(s) 61, 65, 88, 337
LpnPI CCDG 7 cut(s) 129, 211, 291, 312, 390, 417, 443
Lsp1109I GCAGC 2 cut(s) 240, 388
LweI GCATC 2 cut(s) 130, 184
MaeI CTAG 1 cut(s) 162
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 2 cut(s) 32, 44
MalI GATC 4 cut(s) 63, 67, 90, 339
MboI GATC 4 cut(s) 61, 65, 88, 337
MboII GAAGA 2 cut(s) 98, 120
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 2 cut(s) 111, 312
MnlI CCTC 2 cut(s) 112, 226
MseI TTAA 3 cut(s) 167, 315, 356
MslI CAYNNNNRTG 3 cut(s) 245, 261, 358
MspA1I CMGCKG 1 cut(s) 253
MspR9I CCNGG 1 cut(s) 405
MvaI CCWGG 1 cut(s) 405
MwoI GCNNNNNNNGC 2 cut(s) 122, 203
NdeI CATATG 1 cut(s) 343
NdeII GATC 4 cut(s) 61, 65, 88, 337
NheI GCTAGC 1 cut(s) 161
NlaIII CATG 3 cut(s) 244, 260, 465
NlaIV GGNNCC 2 cut(s) 275, 276
NmeAIII GCCGAG 1 cut(s) 142
NmuCI GTSAC 2 cut(s) 32, 44
NspI RCATGY 1 cut(s) 260
PkrI GCNGC 3 cut(s) 252, 255, 378
PpuMI RGGWCCY 1 cut(s) 274
Psp5II RGGWCCY 1 cut(s) 274
Psp6I CCWGG 1 cut(s) 403
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 2 cut(s) 275, 276
PspPI GGNCC 2 cut(s) 187, 274
PspPPI RGGWCCY 1 cut(s) 274
PstI CTGCAG 1 cut(s) 459
RsaI GTAC 2 cut(s) 239, 290
RsaNI GTAC 2 cut(s) 238, 289
RseI CAYNNNNRTG 3 cut(s) 245, 261, 358
SaqAI TTAA 3 cut(s) 167, 315, 356
SatI GCNGC 3 cut(s) 251, 254, 377
Sau3AI GATC 4 cut(s) 61, 65, 88, 337
Sau96I GGNCC 2 cut(s) 187, 274
ScrFI CCNGG 1 cut(s) 405
SduI GDGCHC 1 cut(s) 208
SfaNI GCATC 2 cut(s) 130, 184
SfcI CTRYAG 2 cut(s) 178, 455
SinI GGWCC 2 cut(s) 187, 274
SmiMI CAYNNNNRTG 3 cut(s) 245, 261, 358
Sse9I AATT 2 cut(s) 111, 312
SsiI CCGC 2 cut(s) 137, 251
SspMI CTAG 1 cut(s) 162
StyD4I CCNGG 1 cut(s) 403
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 3 cut(s) 50, 288, 424
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 64
TaqII GACCGA 1 cut(s) 204
TasI AATT 2 cut(s) 111, 312
TatI WGTACW 2 cut(s) 237, 288
TauI GCSGC 1 cut(s) 253
Tru1I TTAA 3 cut(s) 167, 315, 356
Tru9I TTAA 3 cut(s) 167, 315, 356
TseFI GTSAC 2 cut(s) 32, 44
TseI GCWGC 2 cut(s) 253, 376
Tsp45I GTSAC 2 cut(s) 32, 44
VneI GTGCAC 1 cut(s) 204
VpaK11BI GGWCC 2 cut(s) 187, 274
XceI RCATGY 1 cut(s) 260
XspI CTAG 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.