pycom03g15070

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0007816
Physical Location & Seq
Forward (+)
16431464 .. 16437164
5701 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3171 bp
ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGGAGGCCATCGAAGGCAGATCTGGCACGCCGGTCCGGCGAGCTGCCGGCGAAGCCGACGAAGAAAGAGTCGGACGTCCGGCGGAGCCTGCGGCGGAGAAATGTTAAGTACAACATAGACTACGACGACTACTTGGACGAGGAAGACGAGGAAGAAGACGAGAGGAGGAGAGAGAAGAAGGTGAAGCTGGTGATGAAGCTCGACCAGGCCGGAAACCGTTCGGCGCGTGATTCCCACGCGCATGATTCTGGCGGCGATGAGGATGAGGAGGACGGCGAGAGTGAGAGGAAGCAGCAGAAGAGGCGCCGGATTAACGGCGGCGATGATTCCGATAAAGATGATGACGGAATTGATGACGACGATGACGGCGATGATGATTGTGAGGAACGGGGTCGAAAAGCTGACTCGAAGCGGCCTGATTCCCCTCCAGGAACGCCGTCTGATCCTCATGCTGGGATTCCGTTGCCGGATAAGAAAACGTTGGAGTTGATTCTTGACAAGCTTCAAAAGAAAGACGCTTACGGTGTATATGCAGAACCAGTTGATCCTGAAGAGCTTCCTGATTATCACGAGGTCATTGAGCGTCCAATGGACTTTGCCACGGTGAGAAAGCAGTTAGCAAACGGATTGTATTCTACCCTGGAACAATTTGAGGGTGATGTCTTTTTAATATGTTCAAATGCAATGGAATACAATTCATCAGATACGATATACTATAAACAGGCATGTTCAATACAAGAGCTGGCAAAGAGAAAATTTGATAGGCTGCGAAGTGACCATGAACGCTCGGAAAAGGAGCTCAAATTAGTGCAGAAAACAAAGTCCAATTCTTTGGTCAAGAAACAGACAAAGAAGCCTTTGTGTCGAACATTACAGGAACCCATTGGCTCTGATTTCTCCTCAGGTGCCACTCTTGCCACTGCTGTAGATGTCCAGAACACTTCCCTTCCAACACAAGGTAGTGGTTGTGAGAGACCTAGCAACATTGATGGACCTGTAGAGGGTAATTCCTCTTTGAATGAAGCTAATGTGGAGAAGCCAGAAGATGTGTCATCAGGGAAGGGTCTCCTATCGAAAGTTGGGAGGAAGCCATCCGTGGTTGATGAAAACCGCCGTGCAACCTACAACATATCCACTCAGCCCGTGGTCAGATTAGAATCTGTATTTACTACCTTTGACAGTGAAATCAAGCAATTTGTTGCAGTTGGGCTTCATGCAGAATATTCATACGCTAGGAGCCTTGCTCGGTTTTGTGGAAATCTTGGATCTGTTGCTTGGAAAGTTGCGTCAAAGAGGATCGAACAAGCACTACCTGATGGGTGTAAATTTGGCCGTGGCTGGGTTGGAGAATATGAGCCACTTCCAACCCCTGTATTACTGGTTGACAATAGTACCCAAAATCAATCTGCTTTGGCTTCAAAGTTTTATTCATGCCCGGAATTGAGAAAGGATGACAGAACTTTTAGGACTTCAGTTCCTGCTAAGGAGCACCCTGTTACCAGGCCTGTTACAAAAGAGAGACAGCACTCTGTTAGTGTGCCTTCTACTACTAGGGGGCATTACTCAGAAGGGAAACCGACCGTGATCCGTCCTGTTGGAGCAAAACCTAATTCCACAGTTAATCCACAGAAAAACCTGCAATCTCGGTTTAGGGAGCCTGAGAAAAAGGTTCAAAAGGAAGTTGAGTTGAACTCCATACCCTCAGTTCATCCACAGAAAAACCCGCAATCCCGGTTTATGGAGCCCGAGAAGAAGGTTCAAAAGGCAGTTGAGTTGAACTCTATACCCTCAGTTAATCCACAGAATAAACTGCAATCCCGGTTTATCGAACCTGAGAAAAAGTTTCAAAAGGAAGTTGAGTTGAACTCCATACCCTCAGTTCATCCACAGAAAAACCTGCAATCCTGGTCTATCGAGCCTGAGAAGAAGGTTCAAAAGGCAGTTGAGTTGAACTCTATACCCTCAGTTAATCCACAGAATAAACTGCAATCCCGGTTTATTGAGCCTGAGAAAGAGGTTCAAAAGGAAGTTGAGTTGAACTCCATACCCTCAGTTCATCCACAGAAAAACCTGCAATCCCGGTTTATCGAGCCTGAGAAGAAGGTTCAAAAGGCAGTTGAGTTGAACTCTATACCCTCAGTTAAGCCACAGAAAAAACTGCAATCCCGGTTTGTCAAGCCTGAGAAGAAGGTTCAAAAGGAAGTTGAGTTGAACTCTATACCCTCAGTCAATCACAATAATGCCAATCTTGTTGCAGAAAAGCAATCATCAAGAAAATCGGAGGCAGAAGCTTCTAGGCCCAGAGATACAGTATCAAGGAACATGAATCTTCCACAACCTGCACCTTTTAAGATGCCGGATTCTAATGGAAATGTTAACCGAGGGTTGCCTAATGGGAAAAATGTGAGTGCTTCTCTGGACAACCGGATTAGTCCATCTGATAGTGCTCATAGTCAAATGGATAGGACAGCAGCTTTCTTTCCTCATGGACAGGTGCAGGGTCGTAGCGACTCTGTACAGTATTTGAAAAACTTGGCAGAAAAGAATCAAAAGCAACATAAATCGTCAAGTCAAAAGCAACATAAATCGTCAAGTCAATCATCAGTTGATACTCAACCTATTGGGTCATCGGTTCCATCAATAAGAAGAGATGATTCTGGCAATGCTGCAGCTGCTGCTGCCCGGGCTTGGATGTCTATAGGTGCTGGAGCATTTAATCAGCCTACAGAGGATCTCACTAAACCCAAAAGTCAGATATCTGCAGATTCATTATACAACCCAGCTAGGGATTTTCAGTCACAAATTTCACGAGTTCGTGGGGAGTTTCCAACGCAATTTCAAACTCAGAACAGTTTTTCATTTCCAACCTTTTTACAACAACCTGTTCGTATGGCGAATGAAGCACATTTTCAAGGCCGACCTACAGTTTTTCCTCAGTTACCATCAGCTGACTTATCTAGATTTCAGGCGCAATCACCTTGGCGGGGTCTCAGTCCAAATGCTCAGCCAAGACCAAAACAGAAACGGGAAAGCCTTCCTCCAGACTTGAATATTGGTTTCCAGTCCCCTGGGTCTCCGGTAAAACAGTCCTCTAGTCTTCTGGCCGACTCTCAGCAGCCAGACCTGGCGTTGCAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain

Protein Analysis

1057

Amino Acids

118.22

Weight (kDa)

9.13

Isoelectric Point (pI)

65.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 174 - 253 1.1e-24 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 108
Acc36I ACCTGC 4 cut(s) 1674, 1935, 2109, 2377
AccB1I GGYRCC 2 cut(s) 333, 935
AccII CGCG 2 cut(s) 256, 269
AciI CCGC 9 cut(s) 112, 121, 124, 282, 348, 442, 1141, 1754, 3013
AclI AACGTT 1 cut(s) 509
AclWI GGATC 6 cut(s) 467, 569, 1303, 1334, 1609, 2769
AcoI YGGCCR 2 cut(s) 1360, 3132
AcsI RAATTY 3 cut(s) 785, 1355, 2832
AcuI CTGAAG 2 cut(s) 600, 1485
AcyI GRCGYC 2 cut(s) 105, 334
AfaI GTAC 3 cut(s) 140, 1423, 2547
AfiI CCNNNNNNNGG 8 cut(s) 482, 986, 1031, 1369, 1768, 2718, 2815, 3014
AjnI CCWGG 7 cut(s) 234, 457, 669, 1529, 1934, 3097, 3153
Alw21I GWGCWC 3 cut(s) 831, 1521, 2479
Alw26I GTCTC 5 cut(s) 997, 1100, 1543, 3023, 3108
AlwI GGATC 6 cut(s) 467, 569, 1303, 1334, 1609, 2769
AlwNI CAGNNNCTG 2 cut(s) 1508, 2705
Ama87I CYCGRG 2 cut(s) 1775, 2712
AoxI GGCC 8 cut(s) 35, 237, 443, 1360, 1532, 2327, 2944, 3132
ApoI RAATTY 3 cut(s) 785, 1355, 2832
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
Asp700I GAANNNNTTC 3 cut(s) 247, 585, 3063
AspLEI GCGC 4 cut(s) 256, 271, 336, 3001
AspS9I GGNCC 3 cut(s) 63, 1022, 2328
AsuC2I CCSGG 8 cut(s) 1466, 1762, 1849, 2023, 2110, 2197, 2713, 2714
AsuHPI GGTGA 5 cut(s) 223, 232, 646, 698, 2997
AvaI CYCGRG 2 cut(s) 1775, 2712
AvaII GGWCC 2 cut(s) 63, 1022
AxyI CCTNAGG 1 cut(s) 931
BaeI ACNNNNGTAYC 2 cut(s) 1405, 1438
BanI GGYRCC 2 cut(s) 333, 935
BanII GRGCYC 2 cut(s) 831, 1776
BauI CACGAG 2 cut(s) 599, 2838
BbsI GAAGAC 3 cut(s) 180, 192, 3119
Bbv12I GWGCWC 3 cut(s) 831, 1521, 2479
BccI CCATC 7 cut(s) 46, 1013, 1129, 1340, 2473, 2674, 2980
BceAI ACGGC 6 cut(s) 319, 361, 412, 451, 1128, 1347
BciT130I CCWGG 7 cut(s) 236, 459, 671, 1531, 1936, 3099, 3155
BcnI CCSGG 8 cut(s) 1466, 1762, 1849, 2023, 2110, 2197, 2713, 2714
BcoDI GTCTC 5 cut(s) 997, 1100, 1543, 3023, 3108
BfaI CTAG 7 cut(s) 1008, 1263, 1581, 2325, 2814, 2988, 3123
BfmI CTRYAG 7 cut(s) 954, 1026, 2697, 2727, 2754, 2790, 2952
BfoI RGCGCY 1 cut(s) 337
BfuAI ACCTGC 4 cut(s) 1674, 1935, 2109, 2377
BglI GCCNNNNNGGC 1 cut(s) 66
BglII AGATCT 1 cut(s) 49
BlpI GCTNAGC 1 cut(s) 3033
Bme18I GGWCC 2 cut(s) 63, 1022
BmeT110I CYCGRG 2 cut(s) 1775, 2712
BmgT120I GGNCC 3 cut(s) 63, 1022, 2328
BmiI GGNNCC 8 cut(s) 116, 335, 909, 937, 1268, 1686, 1773, 2664
BmsI GCATC 1 cut(s) 2373
BpiI GAAGAC 3 cut(s) 180, 192, 3119
BpmI CTGGAG 3 cut(s) 441, 2757, 3054
Bpu10I CCTNAGC 1 cut(s) 1512
Bpu1102I GCTNAGC 1 cut(s) 3033
BpuMI CCSGG 8 cut(s) 1466, 1762, 1849, 2023, 2110, 2197, 2713, 2714
BsaBI GATNNNNATC 1 cut(s) 1186
BsaHI GRCGYC 2 cut(s) 105, 334
BsaI GGTCTC 4 cut(s) 997, 1100, 3023, 3108
BsaWI WCCGGW 2 cut(s) 2454, 3106
Bsc4I CCNNNNNNNGG 8 cut(s) 482, 986, 1031, 1369, 1768, 2718, 2815, 3014
Bse118I RCCGGY 2 cut(s) 60, 76
Bse1I ACTGG 3 cut(s) 569, 1413, 3091
Bse21I CCTNAGG 1 cut(s) 931
Bse3DI GCAATG 2 cut(s) 720, 2698
Bse8I GATNNNNATC 1 cut(s) 1186
BseBI CCWGG 7 cut(s) 236, 459, 671, 1531, 1936, 3099, 3155
BseGI GGATG 7 cut(s) 298, 1121, 1486, 1738, 1912, 2086, 2727
BseJI GATNNNNATC 1 cut(s) 1186
BseLI CCNNNNNNNGG 8 cut(s) 482, 986, 1031, 1369, 1768, 2718, 2815, 3014
BseMI GCAATG 2 cut(s) 720, 2698
BseNI ACTGG 3 cut(s) 569, 1413, 3091
BseRI GAGGAG 5 cut(s) 31, 208, 211, 311, 919
BseYI CCCAGC 3 cut(s) 482, 1368, 2809
BsgI GTGCAG 3 cut(s) 860, 2355, 2546
Bsh1236I CGCG 2 cut(s) 256, 269
Bsh1285I CGRYCG 1 cut(s) 1611
BshFI GGCC 8 cut(s) 37, 239, 445, 1362, 1534, 2329, 2946, 3134
BshNI GGYRCC 2 cut(s) 333, 935
BsiEI CGRYCG 1 cut(s) 1611
BsiHKAI GWGCWC 3 cut(s) 831, 1521, 2479
BsiHKCI CYCGRG 2 cut(s) 1775, 2712
BslFI GGGAC 1 cut(s) 3079
BslI CCNNNNNNNGG 8 cut(s) 482, 986, 1031, 1369, 1768, 2718, 2815, 3014
BsmAI GTCTC 5 cut(s) 997, 1100, 1543, 3023, 3108
BsmFI GGGAC 1 cut(s) 3079
BsnI GGCC 8 cut(s) 37, 239, 445, 1362, 1534, 2329, 2946, 3134
Bso31I GGTCTC 4 cut(s) 997, 1100, 3023, 3108
BsoBI CYCGRG 2 cut(s) 1775, 2712
Bsp1286I GDGCHC 4 cut(s) 831, 1521, 1776, 2479
Bsp1407I TGTACA 1 cut(s) 2545
Bsp143I GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
Bsp1720I GCTNAGC 1 cut(s) 3033
BspACI CCGC 9 cut(s) 112, 121, 124, 282, 348, 442, 1141, 1754, 3013
BspANI GGCC 8 cut(s) 37, 239, 445, 1362, 1534, 2329, 2946, 3134
BspFNI CGCG 2 cut(s) 256, 269
BspLI GGNNCC 8 cut(s) 116, 335, 909, 937, 1268, 1686, 1773, 2664
BspMAI CTGCAG 2 cut(s) 2701, 2794
BspMI ACCTGC 4 cut(s) 1674, 1935, 2109, 2377
BspPI GGATC 6 cut(s) 467, 569, 1303, 1334, 1609, 2769
BspQI GCTCTTC 1 cut(s) 576
BspT107I GGYRCC 2 cut(s) 333, 935
BspTNI GGTCTC 4 cut(s) 997, 1100, 3023, 3108
BsrDI GCAATG 2 cut(s) 720, 2698
BsrFI RCCGGY 2 cut(s) 60, 76
BsrGI TGTACA 1 cut(s) 2545
BsrI ACTGG 3 cut(s) 569, 1413, 3091
BssAI RCCGGY 2 cut(s) 60, 76
BssMI GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
BssNI GRCGYC 2 cut(s) 105, 334
BssSI CACGAG 2 cut(s) 599, 2838
BssT1I CCWWGG 1 cut(s) 3008
Bst2BI CACGAG 2 cut(s) 599, 2838
Bst2UI CCWGG 7 cut(s) 236, 459, 671, 1531, 1936, 3099, 3155
Bst6I CTCTTC 3 cut(s) 323, 576, 2671
BstACI GRCGYC 2 cut(s) 105, 334
BstAPI GCANNNNNTGC 1 cut(s) 2705
BstAUI TGTACA 1 cut(s) 2545
BstC8I GCNNGC 5 cut(s) 58, 71, 78, 119, 774
BstDSI CCRYGG 4 cut(s) 630, 1125, 1173, 1363
BstF5I GGATG 7 cut(s) 298, 1121, 1486, 1738, 1912, 2086, 2727
BstFNI CGCG 2 cut(s) 256, 269
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 4 cut(s) 256, 271, 336, 3001
BstKTI GATC 8 cut(s) 12, 52, 475, 577, 1298, 1329, 1617, 2764
BstMAI GTCTC 5 cut(s) 997, 1100, 1543, 3023, 3108
BstMBI GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
BstMCI CGRYCG 1 cut(s) 1611
BstNI CCWGG 7 cut(s) 236, 459, 671, 1531, 1936, 3099, 3155
BstNSI RCATGY 1 cut(s) 759
BstSFI CTRYAG 7 cut(s) 954, 1026, 2697, 2727, 2754, 2790, 2952
BstUI CGCG 2 cut(s) 256, 269
BstV2I GAAGAC 3 cut(s) 180, 192, 3119
BstX2I RGATCY 3 cut(s) 49, 1295, 2761
BstXI CCANNNNNNTGG 2 cut(s) 862, 3098
BstYI RGATCY 3 cut(s) 49, 1295, 2761
Bsu36I CCTNAGG 1 cut(s) 931
BsuRI GGCC 8 cut(s) 37, 239, 445, 1362, 1534, 2329, 2946, 3134
BtgI CCRYGG 4 cut(s) 630, 1125, 1173, 1363
BtgZI GCGATG 3 cut(s) 300, 366, 414
BtsCI GGATG 7 cut(s) 298, 1121, 1486, 1738, 1912, 2086, 2727
BtsI GCAGTG 1 cut(s) 948
BtsIMutI CAGTG 2 cut(s) 948, 1216
BveI ACCTGC 4 cut(s) 1674, 1935, 2109, 2377
Cac8I GCNNGC 5 cut(s) 58, 71, 78, 119, 774
CaiI CAGNNNCTG 2 cut(s) 1508, 2705
CfoI GCGC 4 cut(s) 256, 271, 336, 3001
Cfr10I RCCGGY 2 cut(s) 60, 76
Cfr13I GGNCC 3 cut(s) 63, 1022, 2328
Cfr9I CCCGGG 1 cut(s) 2712
CpoI CGGWCCG 1 cut(s) 63
CseI GACGC 3 cut(s) 554, 602, 1305
Csp6I GTAC 3 cut(s) 139, 1422, 2546
CspI CGGWCCG 1 cut(s) 63
CviAII CATG 8 cut(s) 272, 479, 756, 809, 1244, 1461, 2353, 2516
CviQI GTAC 3 cut(s) 139, 1422, 2546
DinI GGCGCC 1 cut(s) 335
DpnI GATC 8 cut(s) 11, 51, 474, 576, 1297, 1328, 1616, 2763
DpnII GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
EaeI YGGCCR 2 cut(s) 1360, 3132
Eam1104I CTCTTC 3 cut(s) 323, 576, 2671
EarI CTCTTC 3 cut(s) 323, 576, 2671
EciI GGCGGA 2 cut(s) 127, 139
Ecl136II GAGCTC 1 cut(s) 829
Eco130I CCWWGG 1 cut(s) 3008
Eco147I AGGCCT 1 cut(s) 1534
Eco24I GRGCYC 2 cut(s) 831, 1776
Eco31I GGTCTC 4 cut(s) 997, 1100, 3023, 3108
Eco32I GATATC 1 cut(s) 2787
Eco47I GGWCC 2 cut(s) 63, 1022
Eco53kI GAGCTC 1 cut(s) 829
Eco57I CTGAAG 2 cut(s) 600, 1485
Eco81I CCTNAGG 1 cut(s) 931
Eco88I CYCGRG 2 cut(s) 1775, 2712
EcoICRI GAGCTC 1 cut(s) 829
EcoRII CCWGG 7 cut(s) 234, 457, 669, 1529, 1934, 3097, 3153
EcoRV GATATC 1 cut(s) 2787
EcoT14I CCWWGG 1 cut(s) 3008
EcoT38I GRGCYC 2 cut(s) 831, 1776
EgeI GGCGCC 1 cut(s) 335
EheI GGCGCC 1 cut(s) 335
ErhI CCWWGG 1 cut(s) 3008
FaeI CATG 8 cut(s) 275, 482, 759, 812, 1247, 1464, 2356, 2519
FaqI GGGAC 1 cut(s) 3079
FatI CATG 8 cut(s) 271, 478, 755, 808, 1243, 1460, 2352, 2515
FauI CCCGC 2 cut(s) 1761, 3006
FokI GGATG 7 cut(s) 305, 1108, 1493, 1725, 1899, 2073, 2734
FriOI GRGCYC 2 cut(s) 831, 1776
FspBI CTAG 7 cut(s) 1008, 1263, 1581, 2325, 2814, 2988, 3123
GlaI GCGC 4 cut(s) 255, 270, 335, 3000
GsaI CCCAGC 3 cut(s) 486, 1372, 2813
GsuI CTGGAG 3 cut(s) 441, 2757, 3054
HaeII RGCGCY 1 cut(s) 337
HaeIII GGCC 8 cut(s) 37, 239, 445, 1362, 1534, 2329, 2946, 3134
HgaI GACGC 3 cut(s) 554, 602, 1305
HhaI GCGC 4 cut(s) 256, 271, 336, 3001
Hin1I GRCGYC 2 cut(s) 105, 334
Hin1II CATG 8 cut(s) 275, 482, 759, 812, 1247, 1464, 2356, 2519
Hin6I GCGC 4 cut(s) 254, 269, 334, 2999
HinP1I GCGC 4 cut(s) 254, 269, 334, 2999
HincII GTYRAC 2 cut(s) 1414, 2407
HindII GTYRAC 2 cut(s) 1414, 2407
HindIII AAGCTT 2 cut(s) 530, 2319
HpaI GTTAAC 1 cut(s) 2407
HphI GGTGA 5 cut(s) 223, 232, 646, 698, 2997
Hpy166II GTNNAC 2 cut(s) 1414, 2407
Hpy8I GTNNAC 2 cut(s) 1414, 2407
Hpy99I CGWCG 3 cut(s) 91, 158, 392
HpyCH4IV ACGT 2 cut(s) 105, 509
HpySE526I ACGT 2 cut(s) 105, 509
Hsp92I GRCGYC 2 cut(s) 105, 334
Hsp92II CATG 8 cut(s) 275, 482, 759, 812, 1247, 1464, 2356, 2519
HspAI GCGC 4 cut(s) 254, 269, 334, 2999
KasI GGCGCC 1 cut(s) 333
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
KspAI GTTAAC 1 cut(s) 2407
Kzo9I GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
LguI GCTCTTC 1 cut(s) 576
LmnI GCTCC 8 cut(s) 114, 826, 1266, 1516, 1628, 1684, 1771, 2738
LweI GCATC 1 cut(s) 2373
MaeI CTAG 7 cut(s) 1008, 1263, 1581, 2325, 2814, 2988, 3123
MaeII ACGT 2 cut(s) 105, 509
MaeIII GTNAC 5 cut(s) 803, 1525, 1537, 2826, 2967
MalI GATC 8 cut(s) 11, 51, 474, 576, 1297, 1328, 1616, 2763
MboI GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
MflI RGATCY 3 cut(s) 49, 1295, 2761
MhlI GDGCHC 4 cut(s) 831, 1521, 1776, 2479
Mly113I GGCGCC 1 cut(s) 334
MlyI GAGTC 4 cut(s) 107, 428, 2534, 3131
MmeI TCCRAC 8 cut(s) 81, 492, 1004, 1354, 1418, 1606, 2882, 2918
MroNI GCCGGC 1 cut(s) 76
MroXI GAANNNNTTC 3 cut(s) 247, 585, 3063
MslI CAYNNNNRTG 2 cut(s) 270, 2268
MspA1I CMGCKG 2 cut(s) 2702, 2978
MvaI CCWGG 7 cut(s) 236, 459, 671, 1531, 1936, 3099, 3155
MvnI CGCG 2 cut(s) 256, 269
NaeI GCCGGC 1 cut(s) 78
NarI GGCGCC 1 cut(s) 334
NciI CCSGG 8 cut(s) 1466, 1762, 1849, 2023, 2110, 2197, 2713, 2714
NdeII GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
NgoMIV GCCGGC 1 cut(s) 76
NlaIII CATG 8 cut(s) 275, 482, 759, 812, 1247, 1464, 2356, 2519
NlaIV GGNNCC 8 cut(s) 116, 335, 909, 937, 1268, 1686, 1773, 2664
NmuCI GTSAC 2 cut(s) 803, 2826
NspI RCATGY 1 cut(s) 759
PasI CCCWGGG 1 cut(s) 3098
PceI AGGCCT 1 cut(s) 1534
PciSI GCTCTTC 1 cut(s) 576
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 396
PdiI GCCGGC 1 cut(s) 78
PdmI GAANNNNTTC 3 cut(s) 247, 585, 3063
PfoI TCCNGGA 1 cut(s) 457
PleI GAGTC 4 cut(s) 106, 428, 2534, 3131
PluTI GGCGCC 1 cut(s) 337
PpsI GAGTC 4 cut(s) 106, 428, 2534, 3131
Psp124BI GAGCTC 1 cut(s) 831
Psp1406I AACGTT 1 cut(s) 509
Psp6I CCWGG 7 cut(s) 234, 457, 669, 1529, 1934, 3097, 3153
PspFI CCCAGC 3 cut(s) 482, 1368, 2809
PspGI CCWGG 7 cut(s) 234, 457, 669, 1529, 1934, 3097, 3153
PspN4I GGNNCC 8 cut(s) 116, 335, 909, 937, 1268, 1686, 1773, 2664
PspPI GGNCC 3 cut(s) 63, 1022, 2328
PsrI GAACNNNNNNTAC 2 cut(s) 1323, 1355
PstI CTGCAG 2 cut(s) 2701, 2794
PstNI CAGNNNCTG 2 cut(s) 1508, 2705
PsuI RGATCY 3 cut(s) 49, 1295, 2761
PvuII CAGCTG 2 cut(s) 2702, 2978
RsaI GTAC 3 cut(s) 140, 1423, 2547
RsaNI GTAC 3 cut(s) 139, 1422, 2546
RseI CAYNNNNRTG 2 cut(s) 270, 2268
Rsr2I CGGWCCG 1 cut(s) 63
RsrII CGGWCCG 1 cut(s) 63
SacI GAGCTC 1 cut(s) 831
SapI GCTCTTC 1 cut(s) 576
Sau3AI GATC 8 cut(s) 9, 49, 472, 574, 1295, 1326, 1614, 2761
Sau96I GGNCC 3 cut(s) 63, 1022, 2328
SchI GAGTC 4 cut(s) 107, 428, 2534, 3131
SduI GDGCHC 4 cut(s) 831, 1521, 1776, 2479
SfaNI GCATC 1 cut(s) 2373
SfcI CTRYAG 7 cut(s) 954, 1026, 2697, 2727, 2754, 2790, 2952
SfoI GGCGCC 1 cut(s) 335
SinI GGWCC 2 cut(s) 63, 1022
SmaI CCCGGG 1 cut(s) 2714
SmiMI CAYNNNNRTG 2 cut(s) 270, 2268
SrfI GCCCGGGC 1 cut(s) 2714
SseBI AGGCCT 1 cut(s) 1534
SsiI CCGC 9 cut(s) 112, 121, 124, 282, 348, 442, 1141, 1754, 3013
SspDI GGCGCC 1 cut(s) 333
SspI AATATT 2 cut(s) 1253, 3082
SspMI CTAG 7 cut(s) 1008, 1263, 1581, 2325, 2814, 2988, 3123
SstI GAGCTC 1 cut(s) 831
StuI AGGCCT 1 cut(s) 1534
StyI CCWWGG 1 cut(s) 3008
TaiI ACGT 2 cut(s) 108, 512
TatI WGTACW 2 cut(s) 138, 2545
TauI GCSGC 4 cut(s) 124, 285, 351, 445
TscAI CASTG 2 cut(s) 955, 1216
TseFI GTSAC 2 cut(s) 803, 2826
Tsp45I GTSAC 2 cut(s) 803, 2826
TspGWI ACGGA 5 cut(s) 390, 480, 669, 1114, 1607
TspMI CCCGGG 1 cut(s) 2712
TspRI CASTG 2 cut(s) 955, 1216
VpaK11BI GGWCC 2 cut(s) 63, 1022
XapI RAATTY 3 cut(s) 785, 1355, 2832
XbaI TCTAGA 1 cut(s) 2987
XceI RCATGY 1 cut(s) 759
XcmI CCANNNNNNNNNTGG 1 cut(s) 1171
XmaI CCCGGG 1 cut(s) 2712
XmnI GAANNNNTTC 3 cut(s) 247, 585, 3063
XspI CTAG 7 cut(s) 1008, 1263, 1581, 2325, 2814, 2988, 3123
ZraI GACGTC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.