Rh5BG275500

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0007816
Physical Location & Seq
Reverse (-)
34713363 .. 34718856
5494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG275500.1

Sequence Viewer

Length: 2664 bp
ATGGGTCAGATCGTGAGGAGGAAGAAGAAAGGCAGGCCATCCAAGGCAGATCTCGCTCGCCGGTCCGGCGAATCGCCGGCGGAGGAGAGGGACGTCCGGAGAAGTCTCCGGCGCCGAAATGTGAAGTACACCATAGACTACGACGACTACTTGGACGAAGACTCCGAGGACGATGAGGAAGAAGTCGAGATTAGAATACAGAAGAAGTTGAAGCTCATGGCCAAGCTGAACCCGACAGCGGCGGAGGCGGCGCGTGACTCCCACGCGCCGGAGTCGTCCGACGAGGACGAGACCGAGAGGAAGCCGCTGAAGAAGCGGCCGATCAACGGCGCCGATAAGGACGAGGATGACGAAGATTACGAGGAAAATGACGGCGGTGATGACGACGATGACTGTGAGGAACGGGGCCGGAAAGCTGACTCCAAGCAACTCAATTCTCCTCCAGGAACGCCGCCGCCGTCGGATCATCATCAGTCTGTCATTCCGTTGCCGGATAAGAAAACGTTGGAGTTGATTCTCGACAAGCTTCAAAAGAAAGATACTTATGGCGTGTATGCAGAACCGGTCGATCCTGAAGAGCTTCCTGACTATCATGATGTCATTGAGCATCCCATGGATTTCGCGACGGTGAGGAAGCAGTTGGCAAATGGAGCCTATTCTACACTGGAACAATTTGAGAGAGATGTCTTTTTAATATGTTCAAACGCAATGCAATACAATTCACCTGAGACAATATACCATAAACAGGCATCTTCTATACAAGAGCTAGGAAGGAGAAAATTTGAGAGGTTAAGAATTGACTATGAACGGTCAGAAAAGGAGGTCAAATCAGTGCAGAAAACAAAGTCAAATTCCTTGGTAAAGAAACAGATAAAGAAGCCTCTGTCCCGAACATTACAGGAACCCATTGGCTCTGATTTCTCCTCAGGTGCCACTCTTGCCACTGCTGCTGAAGTCCAGAACAGTTCCCATCCAACACAAGGAGCTGGTTGTGAGAGAGCTAGCAACATTGATGGGCCTGTAGAGGGTAATTCATCCTTGAATGAAGTTAATCTGGAGAAGGCAGAAGAAATGCTATCAGGGAAGAGTCTACCATCTAAAGTTGGGAAGAAGCCATCTGTGTTTGATGACAACCGTCGTGCAACCTATAACATATCCAATCAGCCTGTGATCACATCAGAATCAATATTCACAACCTTCGAGGGTGAAATCAAGCAGTTTGTTGCAGTCGGGCTTCATGCAGAATATTCATATGCCAGGAGCCTGGCTCGATTCTCTGGAAGTCTTGGACCAGTTGCTTGGAAAGTTGCATCAAAGAGGATCGAACAGGCCTTACCTGATGGATGTAAATTTGGTCGTGGATGGGTCGAAGAATATGAGCCTCTTCCAACCCCTGTACTGATGGTAGACAAAGGTACCCAAAATCAATCTGCTTTGGCTGCAAAATTCTTTTCACACAATGAATCAAGAAAGGATGATAGAACTTTAAGGACTTCAGTTCCTGCTAAGGATCGCCCTGTTACTAGGTCTGTTATAGAAGAGAGACAGCACTGTGTTAGTGTTCCTACTTCAGCGGGGAAACCATCATTTTTTGGTTCTTCTAGGGGACATTACTCGGAAGAGAAACCGCCTGTTATTAGTTCTGTCGGAGGAAAAGGTGGTAATGCAGTTAGTGCCATTCATAAGCAGCAAAATCCACAATCCAGGTTTATTGAGAGTGGGAAACAGGTTCCGAAGAAAGTTGAGTTGAACTCTGTACCCTCAGTTAATCAAAATAATGCCAACCTTGTTGCTGAAAAGCAATCACCAAGAAACTCAGAGACAGCAACTTCAAGGTCCAGAGGTACTTCATCGAGGAACATGAATCTTCAGCAGCCTGTACCTTTTAAGATGCCGGATTCTAATGGTGTTATTACCTCACGGTTGCCTAATGGGAAAGGTGCGAGTGCTTGTATGGAGAATCGGATGATTGGTTCTTCTGATAGGGCTCCTAGCCAAATGGAAAGAACTGAAGCTTATTTTCCTCATGCACAGGAGCAGGGTCTTAGTGACCCAGTACAGTTGATGAAAAAATTGGCGGAGAAGACTCAAAAGCAACAGCAGTCATCAATTCAATCGTCAATTGATACTAAACCTGTCGTGTCATCGGTTCCATCAACGAGAAGAGATGATCCAAGCAATGCTGCAGCAGCTGCTGCCCGTGCTTGGATGTCTATAGGGGGTGCATCCTTTAAACAGCCAACAGACAATCCGACAGTGCCCAAAAGTCAGATCTATGCAGATTCATTATATAACCCATCACGAGAGATTAATTCACAAATTTCACGAGTTCGGGGGGAGGTTCCTAATTCTGGTGCAATGCAATTTCAGACTGAGAACAATTTTTCATTTCCAACTTTTTTACCACGACCTGTTCATATGGTGAATGAACCACAGTTCCAAAATCGACCTATATTTTTCCCTCAGTTGGCAGCAGCTGATTTGTCTAGGTTTCAGGTGCCGCCCCCTTGGAGGGGTCTCAGTCCTTGTGCCCAGCCAAGACAGAAACAAGAATGTCTTCCTCCAGATTTAAATATTGGTTTCCAGTCCCCAGGGTCTCCAGTGAAACAGTCATCTGGTGTTATGGTTGACTCTCAGCAGCCAGACCTGGCTTTGCAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain

Protein Analysis

887

Amino Acids

98.41

Weight (kDa)

6.96

Isoelectric Point (pI)

65.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 172 - 251 1.1e-24 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
Acc65I GGTACC 1 cut(s) 1415
AccB1I GGYRCC 5 cut(s) 111, 329, 929, 1415, 2497
AccI GTMKAC 2 cut(s) 1090, 1407
AccII CGCG 3 cut(s) 253, 266, 623
AccIII TCCGGA 1 cut(s) 96
AclI AACGTT 1 cut(s) 503
AclWI GGATC 5 cut(s) 471, 563, 1328, 1518, 2165
AcoI YGGCCR 2 cut(s) 219, 317
AcsI RAATTY 5 cut(s) 779, 850, 1349, 1445, 2319
AcuI CTGAAG 7 cut(s) 329, 594, 972, 1479, 1554, 1853, 2031
AcyI GRCGYC 3 cut(s) 93, 112, 330
AfaI GTAC 7 cut(s) 128, 1398, 1417, 1758, 1846, 1881, 2058
AgeI ACCGGT 1 cut(s) 562
AgsI TTSAA 7 cut(s) 211, 530, 702, 1042, 1750, 1833, 2114
AjnI CCWGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
AloI GAACNNNNNNTCC 4 cut(s) 1957, 1989, 2421, 2453
Alw26I GTCTC 7 cut(s) 110, 284, 722, 1537, 1814, 2522, 2601
AlwI GGATC 5 cut(s) 471, 563, 1328, 1518, 2165
AlwNI CAGNNNCTG 4 cut(s) 1502, 2192, 2195, 2477
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 6 cut(s) 35, 219, 317, 406, 1016, 1329
ApoI RAATTY 5 cut(s) 779, 850, 1349, 1445, 2319
AseI ATTAAT 1 cut(s) 2310
AsiGI ACCGGT 1 cut(s) 562
Asp700I GAANNNNTTC 2 cut(s) 579, 2556
Asp718I GGTACC 1 cut(s) 1415
AspLEI GCGC 4 cut(s) 114, 253, 268, 332
AspS9I GGNCC 5 cut(s) 63, 406, 1016, 1289, 1836
AsuHPI GGTGA 6 cut(s) 389, 640, 714, 1217, 1797, 2434
AsuNHI GCTAGC 1 cut(s) 1001
AvaII GGWCC 3 cut(s) 63, 1289, 1836
AxyI CCTNAGG 1 cut(s) 925
BaeGI GKGCMC 2 cut(s) 2262, 2533
BaeI ACNNNNGTAYC 2 cut(s) 1399, 1432
BalI TGGCCA 1 cut(s) 221
BanI GGYRCC 5 cut(s) 111, 329, 929, 1415, 2497
BanII GRGCYC 1 cut(s) 1990
BauI CACGAG 2 cut(s) 2301, 2325
BbsI GAAGAC 3 cut(s) 165, 2090, 2549
BceAI ACGGC 3 cut(s) 343, 388, 442
BciT130I CCWGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
BclI TGATCA 1 cut(s) 1170
BcoDI GTCTC 7 cut(s) 110, 284, 722, 1537, 1814, 2522, 2601
BfaI CTAG 6 cut(s) 767, 1002, 1524, 1602, 1992, 2487
BfmI CTRYAG 3 cut(s) 1020, 2184, 2214
BfoI RGCGCY 2 cut(s) 115, 333
BglI GCCNNNNNGGC 1 cut(s) 66
BglII AGATCT 2 cut(s) 49, 2271
Bme1390I CCNGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
Bme18I GGWCC 3 cut(s) 63, 1289, 1836
BmgT120I GGNCC 5 cut(s) 63, 406, 1016, 1289, 1836
BmrFI CCNGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
BmrI ACTGGG 1 cut(s) 2048
BmsI GCATC 5 cut(s) 616, 758, 1319, 1881, 2234
BmtI GCTAGC 1 cut(s) 1005
BmuI ACTGGG 1 cut(s) 2048
BoxI GACNNNNGTC 1 cut(s) 1134
BpiI GAAGAC 3 cut(s) 165, 2090, 2549
BplI GAGNNNNNCTC 4 cut(s) 1252, 1284, 1736, 1768
BpmI CTGGAG 4 cut(s) 426, 1076, 2547, 2583
Bpu10I CCTNAGC 1 cut(s) 1506
BsaBI GATNNNNATC 1 cut(s) 468
BsaHI GRCGYC 3 cut(s) 93, 112, 330
BsaI GGTCTC 3 cut(s) 284, 2522, 2601
BsaJI CCNNGG 7 cut(s) 42, 165, 612, 855, 2507, 2590, 2591
BsaWI WCCGGW 2 cut(s) 96, 562
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bse118I RCCGGY 3 cut(s) 60, 76, 562
Bse1I ACTGG 5 cut(s) 669, 1292, 2054, 2584, 2600
Bse21I CCTNAGG 1 cut(s) 925
Bse3DI GCAATG 3 cut(s) 714, 2185, 2364
Bse8I GATNNNNATC 1 cut(s) 468
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
BseDI CCNNGG 7 cut(s) 42, 165, 612, 855, 2507, 2590, 2591
BseJI GATNNNNATC 1 cut(s) 468
BseMI GCAATG 3 cut(s) 714, 2185, 2364
BseMII CTCAG 8 cut(s) 717, 939, 1776, 1830, 2364, 2477, 2533, 2648
BseNI ACTGG 5 cut(s) 669, 1292, 2054, 2584, 2600
BseRI GAGGAG 4 cut(s) 31, 98, 429, 913
BseSI GKGCMC 2 cut(s) 2262, 2533
BseX3I CGGCCG 1 cut(s) 317
BseYI CCCAGC 1 cut(s) 2532
BsgI GTGCAG 1 cut(s) 854
Bsh1236I CGCG 3 cut(s) 253, 266, 623
Bsh1285I CGRYCG 2 cut(s) 320, 567
BshFI GGCC 6 cut(s) 37, 221, 319, 408, 1018, 1331
BshNI GGYRCC 5 cut(s) 111, 329, 929, 1415, 2497
BshTI ACCGGT 1 cut(s) 562
BsiEI CGRYCG 2 cut(s) 320, 567
BslFI GGGAC 4 cut(s) 104, 871, 1620, 2572
BsmAI GTCTC 7 cut(s) 110, 284, 722, 1537, 1814, 2522, 2601
BsmFI GGGAC 4 cut(s) 104, 871, 1620, 2572
BsnI GGCC 6 cut(s) 37, 221, 319, 408, 1018, 1331
Bso31I GGTCTC 3 cut(s) 284, 2522, 2601
Bsp1286I GDGCHC 3 cut(s) 1990, 2262, 2533
Bsp13I TCCGGA 1 cut(s) 96
Bsp19I CCATGG 1 cut(s) 612
Bsp68I TCGCGA 1 cut(s) 623
BspANI GGCC 6 cut(s) 37, 221, 319, 408, 1018, 1331
BspCNI CTCAG 8 cut(s) 718, 938, 1775, 1829, 2365, 2476, 2532, 2647
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 3 cut(s) 253, 266, 623
BspHI TCATGA 1 cut(s) 592
BspMAI CTGCAG 1 cut(s) 2188
BspOI GCTAGC 1 cut(s) 1005
BspPI GGATC 5 cut(s) 471, 563, 1328, 1518, 2165
BspQI GCTCTTC 1 cut(s) 570
BspT107I GGYRCC 5 cut(s) 111, 329, 929, 1415, 2497
BspTNI GGTCTC 3 cut(s) 284, 2522, 2601
BsrDI GCAATG 3 cut(s) 714, 2185, 2364
BsrFI RCCGGY 3 cut(s) 60, 76, 562
BsrI ACTGG 5 cut(s) 669, 1292, 2054, 2584, 2600
BssAI RCCGGY 3 cut(s) 60, 76, 562
BssECI CCNNGG 7 cut(s) 42, 165, 612, 855, 2507, 2590, 2591
BssNI GRCGYC 3 cut(s) 93, 112, 330
BssSI CACGAG 2 cut(s) 2301, 2325
BssT1I CCWWGG 4 cut(s) 42, 612, 855, 2507
Bst2BI CACGAG 2 cut(s) 2301, 2325
Bst2UI CCWGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
Bst6I CTCTTC 6 cut(s) 570, 1079, 1389, 1533, 1614, 2158
BstACI GRCGYC 3 cut(s) 93, 112, 330
BstAPI GCANNNNNTGC 3 cut(s) 1673, 2192, 2195
BstC8I GCNNGC 4 cut(s) 35, 58, 78, 1003
BstDSI CCRYGG 1 cut(s) 612
BstFNI CGCG 3 cut(s) 253, 266, 623
BstH2I RGCGCY 2 cut(s) 115, 333
BstHHI GCGC 4 cut(s) 114, 253, 268, 332
BstMAI GTCTC 7 cut(s) 110, 284, 722, 1537, 1814, 2522, 2601
BstMCI CGRYCG 2 cut(s) 320, 567
BstNI CCWGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
BstPAI GACNNNNGTC 1 cut(s) 1134
BstSCI CCNGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
BstSFI CTRYAG 3 cut(s) 1020, 2184, 2214
BstSLI GKGCMC 2 cut(s) 2262, 2533
BstUI CGCG 3 cut(s) 253, 266, 623
BstV2I GAAGAC 3 cut(s) 165, 2090, 2549
BstX2I RGATCY 2 cut(s) 49, 2271
BstXI CCANNNNNNTGG 2 cut(s) 1264, 1299
BstYI RGATCY 2 cut(s) 49, 2271
BstZI CGGCCG 1 cut(s) 317
Bsu36I CCTNAGG 1 cut(s) 925
BsuRI GGCC 6 cut(s) 37, 221, 319, 408, 1018, 1331
BtgI CCRYGG 1 cut(s) 612
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 6 cut(s) 662, 837, 942, 1549, 2262, 2607
BtuMI TCGCGA 1 cut(s) 623
Cac8I GCNNGC 4 cut(s) 35, 58, 78, 1003
CaiI CAGNNNCTG 4 cut(s) 1502, 2192, 2195, 2477
CciI TCATGA 1 cut(s) 592
CfoI GCGC 4 cut(s) 114, 253, 268, 332
Cfr10I RCCGGY 3 cut(s) 60, 76, 562
Cfr13I GGNCC 5 cut(s) 63, 406, 1016, 1289, 1836
CpoI CGGWCCG 1 cut(s) 63
Csp6I GTAC 7 cut(s) 127, 1397, 1416, 1757, 1845, 1880, 2057
CspAI ACCGGT 1 cut(s) 562
CspI CGGWCCG 1 cut(s) 63
CviAII CATG 6 cut(s) 217, 593, 613, 1238, 1861, 2027
CviQI GTAC 7 cut(s) 127, 1397, 1416, 1757, 1845, 1880, 2057
DinI GGCGCC 2 cut(s) 113, 331
DraI TTTAAA 2 cut(s) 2233, 2571
EaeI YGGCCR 2 cut(s) 219, 317
EagI CGGCCG 1 cut(s) 317
Eam1104I CTCTTC 6 cut(s) 570, 1079, 1389, 1533, 1614, 2158
EarI CTCTTC 6 cut(s) 570, 1079, 1389, 1533, 1614, 2158
EciI GGCGGA 3 cut(s) 95, 257, 2093
EclXI CGGCCG 1 cut(s) 317
Eco130I CCWWGG 4 cut(s) 42, 612, 855, 2507
Eco147I AGGCCT 1 cut(s) 1331
Eco24I GRGCYC 1 cut(s) 1990
Eco31I GGTCTC 3 cut(s) 284, 2522, 2601
Eco47I GGWCC 3 cut(s) 63, 1289, 1836
Eco52I CGGCCG 1 cut(s) 317
Eco57I CTGAAG 7 cut(s) 329, 594, 972, 1479, 1554, 1853, 2031
Eco81I CCTNAGG 1 cut(s) 925
EcoRII CCWGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
EcoT14I CCWWGG 4 cut(s) 42, 612, 855, 2507
EcoT38I GRGCYC 1 cut(s) 1990
EgeI GGCGCC 2 cut(s) 113, 331
EheI GGCGCC 2 cut(s) 113, 331
ErhI CCWWGG 4 cut(s) 42, 612, 855, 2507
FaeI CATG 6 cut(s) 220, 596, 616, 1241, 1864, 2030
FalI AAGNNNNNCTT 2 cut(s) 2541, 2573
FaqI GGGAC 4 cut(s) 104, 871, 1620, 2572
FatI CATG 6 cut(s) 216, 592, 612, 1237, 1860, 2026
FauI CCCGC 1 cut(s) 1567
FauNDI CATATG 2 cut(s) 1252, 2418
FbaI TGATCA 1 cut(s) 1170
FblI GTMKAC 2 cut(s) 1090, 1407
FriOI GRGCYC 1 cut(s) 1990
FspBI CTAG 6 cut(s) 767, 1002, 1524, 1602, 1992, 2487
GlaI GCGC 4 cut(s) 113, 252, 267, 331
GsaI CCCAGC 1 cut(s) 2536
GsuI CTGGAG 4 cut(s) 426, 1076, 2547, 2583
HaeII RGCGCY 2 cut(s) 115, 333
HaeIII GGCC 6 cut(s) 37, 221, 319, 408, 1018, 1331
HhaI GCGC 4 cut(s) 114, 253, 268, 332
Hin1I GRCGYC 3 cut(s) 93, 112, 330
Hin1II CATG 6 cut(s) 220, 596, 616, 1241, 1864, 2030
Hin6I GCGC 4 cut(s) 112, 251, 266, 330
HinP1I GCGC 4 cut(s) 112, 251, 266, 330
HincII GTYRAC 1 cut(s) 2629
HindII GTYRAC 1 cut(s) 2629
HindIII AAGCTT 2 cut(s) 524, 2013
HphI GGTGA 6 cut(s) 389, 640, 714, 1217, 1797, 2434
Hpy166II GTNNAC 4 cut(s) 129, 1091, 1408, 2629
Hpy8I GTNNAC 4 cut(s) 129, 1091, 1408, 2629
Hpy99I CGWCG 6 cut(s) 146, 284, 389, 463, 628, 1140
HpyAV CCTTC 3 cut(s) 765, 1054, 1207
HpyCH4IV ACGT 2 cut(s) 93, 503
HpySE526I ACGT 2 cut(s) 93, 503
Hsp92I GRCGYC 3 cut(s) 93, 112, 330
Hsp92II CATG 6 cut(s) 220, 596, 616, 1241, 1864, 2030
HspAI GCGC 4 cut(s) 112, 251, 266, 330
KasI GGCGCC 2 cut(s) 111, 329
Kpn2I TCCGGA 1 cut(s) 96
KpnI GGTACC 1 cut(s) 1419
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
Ksp22I TGATCA 1 cut(s) 1170
LguI GCTCTTC 1 cut(s) 570
LmnI GCTCC 5 cut(s) 650, 983, 1260, 1993, 2035
LweI GCATC 5 cut(s) 616, 758, 1319, 1881, 2234
MaeI CTAG 6 cut(s) 767, 1002, 1524, 1602, 1992, 2487
MaeII ACGT 2 cut(s) 93, 503
MaeIII GTNAC 3 cut(s) 254, 1519, 2048
MfeI CAATTG 1 cut(s) 2121
MflI RGATCY 2 cut(s) 49, 2271
MhlI GDGCHC 3 cut(s) 1990, 2262, 2533
MlsI TGGCCA 1 cut(s) 221
MluNI TGGCCA 1 cut(s) 221
Mly113I GGCGCC 2 cut(s) 112, 330
MlyI GAGTC 7 cut(s) 155, 251, 281, 413, 1096, 2080, 2624
MmeI TCCRAC 8 cut(s) 303, 441, 486, 998, 1412, 1627, 2276, 2417
Mox20I TGGCCA 1 cut(s) 221
MreI CGCCGGCG 1 cut(s) 76
MroI TCCGGA 1 cut(s) 96
MroNI GCCGGC 1 cut(s) 76
MroXI GAANNNNTTC 2 cut(s) 579, 2556
MscI TGGCCA 1 cut(s) 221
MseI TTAA 9 cut(s) 692, 791, 1050, 1487, 1767, 1887, 2232, 2310, 2570
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 5 cut(s) 239, 307, 1574, 2192, 2477
MspR9I CCNGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
MunI CAATTG 1 cut(s) 2121
MvaI CCWGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
MvnI CGCG 3 cut(s) 253, 266, 623
NaeI GCCGGC 1 cut(s) 78
NarI GGCGCC 2 cut(s) 112, 330
NcoI CCATGG 1 cut(s) 612
NdeI CATATG 2 cut(s) 1252, 2418
NgoMIV GCCGGC 1 cut(s) 76
NheI GCTAGC 1 cut(s) 1001
NlaIII CATG 6 cut(s) 220, 596, 616, 1241, 1864, 2030
NmuCI GTSAC 2 cut(s) 254, 2048
NruI TCGCGA 1 cut(s) 623
PagI TCATGA 1 cut(s) 592
PasI CCCWGGG 1 cut(s) 2591
PceI AGGCCT 1 cut(s) 1331
PciSI GCTCTTC 1 cut(s) 570
PcsI WCGNNNNNNNCGW 4 cut(s) 162, 348, 357, 455
PdiI GCCGGC 1 cut(s) 78
PdmI GAANNNNTTC 2 cut(s) 579, 2556
PfeI GAWTC 9 cut(s) 71, 514, 1181, 1272, 1463, 1864, 1898, 1960, 2282
PfoI TCCNGGA 1 cut(s) 442
PinAI ACCGGT 1 cut(s) 562
PleI GAGTC 7 cut(s) 155, 251, 280, 413, 1095, 2080, 2624
PluTI GGCGCC 2 cut(s) 115, 333
PpsI GAGTC 7 cut(s) 155, 251, 280, 413, 1095, 2080, 2624
PshAI GACNNNNGTC 1 cut(s) 1134
PshBI ATTAAT 1 cut(s) 2310
Psp1406I AACGTT 1 cut(s) 503
Psp6I CCWGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
PspFI CCCAGC 1 cut(s) 2532
PspGI CCWGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
PspPI GGNCC 5 cut(s) 63, 406, 1016, 1289, 1836
PsrI GAACNNNNNNTAC 2 cut(s) 1317, 1349
PstI CTGCAG 1 cut(s) 2188
PstNI CAGNNNCTG 4 cut(s) 1502, 2192, 2195, 2477
PsuI RGATCY 2 cut(s) 49, 2271
PvuII CAGCTG 2 cut(s) 2192, 2477
RruI TCGCGA 1 cut(s) 623
RsaI GTAC 7 cut(s) 128, 1398, 1417, 1758, 1846, 1881, 2058
RsaNI GTAC 7 cut(s) 127, 1397, 1416, 1757, 1845, 1880, 2057
Rsr2I CGGWCCG 1 cut(s) 63
RsrII CGGWCCG 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 570
SaqAI TTAA 9 cut(s) 692, 791, 1050, 1487, 1767, 1887, 2232, 2310, 2570
Sau96I GGNCC 5 cut(s) 63, 406, 1016, 1289, 1836
SchI GAGTC 7 cut(s) 155, 251, 281, 413, 1096, 2080, 2624
ScrFI CCNGG 6 cut(s) 444, 1258, 1265, 1705, 2592, 2648
SduI GDGCHC 3 cut(s) 1990, 2262, 2533
SfaNI GCATC 5 cut(s) 616, 758, 1319, 1881, 2234
SfcI CTRYAG 3 cut(s) 1020, 2184, 2214
SfoI GGCGCC 2 cut(s) 113, 331
SgrAI CRCCGGYG 1 cut(s) 76
SinI GGWCC 3 cut(s) 63, 1289, 1836
SmiI ATTTAAAT 1 cut(s) 2571
SseBI AGGCCT 1 cut(s) 1331
SspDI GGCGCC 2 cut(s) 111, 329
SspI AATATT 3 cut(s) 1188, 1247, 2575
SspMI CTAG 6 cut(s) 767, 1002, 1524, 1602, 1992, 2487
StuI AGGCCT 1 cut(s) 1331
StyD4I CCNGG 6 cut(s) 442, 1256, 1263, 1703, 2590, 2646
StyI CCWWGG 4 cut(s) 42, 612, 855, 2507
SwaI ATTTAAAT 1 cut(s) 2571
TaiI ACGT 2 cut(s) 96, 506
TaqI TCGA 9 cut(s) 186, 519, 567, 1200, 1270, 1323, 1368, 1853, 2446
TaqII GACCGA 1 cut(s) 308
TatI WGTACW 3 cut(s) 126, 1396, 2056
TauI GCSGC 7 cut(s) 242, 251, 307, 319, 454, 457, 2503
TfiI GAWTC 9 cut(s) 71, 514, 1181, 1272, 1463, 1864, 1898, 1960, 2282
Tru1I TTAA 9 cut(s) 692, 791, 1050, 1487, 1767, 1887, 2232, 2310, 2570
Tru9I TTAA 9 cut(s) 692, 791, 1050, 1487, 1767, 1887, 2232, 2310, 2570
TscAI CASTG 6 cut(s) 669, 837, 949, 1556, 2262, 2607
TseFI GTSAC 2 cut(s) 254, 2048
Tsp45I GTSAC 2 cut(s) 254, 2048
TspGWI ACGGA 1 cut(s) 474
TspRI CASTG 6 cut(s) 669, 837, 949, 1556, 2262, 2607
VpaK11BI GGWCC 3 cut(s) 63, 1289, 1836
VspI ATTAAT 1 cut(s) 2310
XapI RAATTY 5 cut(s) 779, 850, 1349, 1445, 2319
XmiI GTMKAC 2 cut(s) 1090, 1407
XmnI GAANNNNTTC 2 cut(s) 579, 2556
XspI CTAG 6 cut(s) 767, 1002, 1524, 1602, 1992, 2487
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.