Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014485.1

Orthogroup ID

OG0007816

Physical Location & Seq

Genomic Coordinates Reverse (-)

23237 .. 28751

Gene Structure 5515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014485.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

atgggtcagatcgtgaggaggaagaagaaaggcaggccatccaaggcagatctcgctcgccggtccggcgaatcgccggcggaggagagggacgtccggagaagtctccggcgccgaaatgtgaagtacaccatagactacgacgactacttggacgaagactccgaggacgatgaggaggaagtcgagattagaatacagaagaagttgaagctcatggccaagctgaacccgacagcggcggaggcggcgcgtgactcccacgcgccggagtcgtccgacgaggacgagaccgagaggaagccgctgaagaagcggccgatcaacggcgccgataaggacgaggatgacgaagattacgaggaaaatgacggcggtgatgacgacgatgactgtgaggaacggggccggaaagctgactccaagcaactcaattctcctccaggaacgccgccgccgtcggatcatcatcagtctgtcattccgttgccggataagaaaacgttggagttgattctcgacaagcttcaaaagaaagatacttatggcgtgtatgcagaaccagtcgatcccgaagagcttcctgactatcatgatgtcattgagcatcccatggatttcgcgacggtgaggaagcagttggcaaatggagcctattctacactggaacaatttgagagcgatgtctttttaatatgttcaaacgcaatgcaatacaattcacctgagacgatataccataaacaggcatcttctatacaagagctaggaaggagaaaatttgagaggttaagaattgactatgaacggtcagaaaaggaggtcaaatcagtgcagaaaacaaagtcaaattccttggtaaagaaacagataaagaagcctctgtcccgaacattacaggaacccattggctctgatttctcctcaggtgccactcttgccactgctgccgaagtccagaacagttcccatccaacacaaggagctggttgcgagagagctagcaacattgatgggcctgtagagggtaattcatccttgaatgaagctaatctagagaaggcagaagaaatgttatcagggaagagtctaccatctaaagttgggaagaagccatctgtgtttgatgacaaccgtcgtgcaacctataacatatccaatcagcctgtgatcacatcagaatcaatattcacaacctttgagggtgaaatcaagcagtttgttgcagtcgggcttcatgcagaatattcatatgccaggagcctggctcgattctctggaagtcttggaccagttgcttggaaagttgcatcaaagaggatcgaacaggccttacctgatggatgtaaatttggtcgtggatgggtcgaagaatatgagccacttccaacccctgtactgatggtagacaaaggtacccaaaatcaatctgctttggctgcaaaattcttttcacacaatgaatcaagaaaggatgatagaactttaaggacttcagttcctgctaaggatcgccctgttactaggtctgttatagaagagaggcagcactgtgttagtgttcctacttcagcagggaaaccatcattttttggttcttctaggggacattactcggaagagaaaccgcctgttattagttctgtaggaggaaaaggtggtaatgcagttaatgccattcataagcagcaaaatccacaatccaggtttattgagagtgggaaacaggttccgaagaaagttgagttgaactctgtaccctcagttaatcaaaataatgccaaccttgttgctgaaaagcaatcaccaagaaactcagagccagcaacttcaaggtccagaggtacatcatcgaggaacatgaatcttcagcagcctgtaccttttaagatgccggattctaatggtgttattacctcacggttgcctaatgggaaaggtgcgagtgcttgtatggagaatcggatgattggttcttctgatagggctcctagccaaatggaaagaactgaagcttattttcctcatgcacaggagcagggtcttagtgacccagtacagttaatgaaaaaattggcggagaagactcaaaagcaacagcagtcatcaattcaatcgtcaattgatactaaacctgtcgtgtcaacggttccatcaacaagaagagatgatccaagcaatgctgcagcagctgctgcccgtgcttggatgtctatagggggtgcatcctttaaacagccaacagacaatccgacagtgcccaaaagtcagatctatgcagattcattatataacccatcacgagagattaattcacaaatttcacgagttcggggggaggttcctaattctggtgcaatgcaatttcagactgagaacaatttttcatttccaacttttttaccacgacctgttcatatggtgaatgaaccacagttccaaaatcgacctatatttttccctcagttggcagcagctgatttgtctaggtttcaggtgccgcccccttggaggggtctcagtccttgtgcccagccaagacagaaacaagaatgtcttcctccagatttaaatattggtttccagtccccagggtctccagtgaaacagtcatctggtgttatggttgactctcagcagccagacctggctttgcaactctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

887

Amino Acids

98.35

Weight (kDa)

6.76

Isoelectric Point (pI)

66.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55040 AT5G55040
fragaria_vesca	FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980
malus_domestica	MD03G1199100.v1.1 MD11G1215500.v1.1
prunus_persica	Prupe.4G215800_v2.0.a1
pyrus_communis	pycom03g15070 pycom11g19000
rosa_chinensis	RchiOBHm_Chr5g0040321
rosa_laevigata	RLG00000033971
rosa_multiflora	Rmu_sc0014485.1_g000009
rosa_roxburghii	Rroxscaffold_1G00040990
rosa_rugosa	Rorug05G0184600
rosa_samantha	Rh5AG271600 Rh5BG275500 Rh5CG307700 Rh5DG283700
rosa_wichuraiana	Rw5G025400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	96
Acc65I	GGTACC	1 cut(s)	1415
AccB1I	GGYRCC	5 cut(s)	111, 329, 929, 1415, 2497
AccI	GTMKAC	2 cut(s)	1090, 1407
AccII	CGCG	3 cut(s)	253, 266, 623
AccIII	TCCGGA	1 cut(s)	96
AclI	AACGTT	1 cut(s)	503
AclWI	GGATC	5 cut(s)	471, 563, 1328, 1518, 2165
AcoI	YGGCCR	2 cut(s)	219, 317
AcsI	RAATTY	5 cut(s)	779, 850, 1349, 1445, 2319
AcuI	CTGAAG	5 cut(s)	329, 1479, 1554, 1853, 2031
AcyI	GRCGYC	3 cut(s)	93, 112, 330
AfaI	GTAC	7 cut(s)	128, 1398, 1417, 1758, 1846, 1881, 2058
AgsI	TTSAA	7 cut(s)	211, 530, 702, 1042, 1750, 1833, 2114
AjnI	CCWGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
AloI	GAACNNNNNNTCC	4 cut(s)	1957, 1989, 2421, 2453
Alw26I	GTCTC	5 cut(s)	110, 284, 722, 2522, 2601
AlwI	GGATC	5 cut(s)	471, 563, 1328, 1518, 2165
AlwNI	CAGNNNCTG	4 cut(s)	1502, 2192, 2195, 2477
Aor13HI	TCCGGA	1 cut(s)	96
AoxI	GGCC	6 cut(s)	35, 219, 317, 406, 1016, 1329
ApoI	RAATTY	5 cut(s)	779, 850, 1349, 1445, 2319
AseI	ATTAAT	1 cut(s)	2310
Asp700I	GAANNNNTTC	2 cut(s)	579, 2556
Asp718I	GGTACC	1 cut(s)	1415
AspLEI	GCGC	4 cut(s)	114, 253, 268, 332
AspS9I	GGNCC	5 cut(s)	63, 406, 1016, 1289, 1836
AsuHPI	GGTGA	6 cut(s)	389, 640, 714, 1217, 1797, 2434
AsuNHI	GCTAGC	1 cut(s)	1001
AvaII	GGWCC	3 cut(s)	63, 1289, 1836
AxyI	CCTNAGG	1 cut(s)	925
BaeGI	GKGCMC	2 cut(s)	2262, 2533
BaeI	ACNNNNGTAYC	2 cut(s)	1399, 1432
BalI	TGGCCA	1 cut(s)	221
BanI	GGYRCC	5 cut(s)	111, 329, 929, 1415, 2497
BanII	GRGCYC	1 cut(s)	1990
BauI	CACGAG	2 cut(s)	2301, 2325
BbsI	GAAGAC	3 cut(s)	165, 2090, 2549
BceAI	ACGGC	3 cut(s)	343, 388, 442
BciT130I	CCWGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
BclI	TGATCA	1 cut(s)	1170
BcoDI	GTCTC	5 cut(s)	110, 284, 722, 2522, 2601
BfaI	CTAG	7 cut(s)	767, 1002, 1055, 1524, 1602, 1992, 2487
BfmI	CTRYAG	4 cut(s)	1020, 1644, 2184, 2214
BfoI	RGCGCY	2 cut(s)	115, 333
BglI	GCCNNNNNGGC	1 cut(s)	66
BglII	AGATCT	2 cut(s)	49, 2271
Bme1390I	CCNGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
Bme18I	GGWCC	3 cut(s)	63, 1289, 1836
BmgT120I	GGNCC	5 cut(s)	63, 406, 1016, 1289, 1836
BmrFI	CCNGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
BmrI	ACTGGG	1 cut(s)	2048
BmsI	GCATC	5 cut(s)	616, 758, 1319, 1881, 2234
BmtI	GCTAGC	1 cut(s)	1005
BmuI	ACTGGG	1 cut(s)	2048
BoxI	GACNNNNGTC	1 cut(s)	1134
BpiI	GAAGAC	3 cut(s)	165, 2090, 2549
BplI	GAGNNNNNCTC	4 cut(s)	1252, 1284, 1736, 1768
BpmI	CTGGAG	3 cut(s)	426, 2547, 2583
Bpu10I	CCTNAGC	1 cut(s)	1506
BsaBI	GATNNNNATC	1 cut(s)	468
BsaHI	GRCGYC	3 cut(s)	93, 112, 330
BsaI	GGTCTC	3 cut(s)	284, 2522, 2601
BsaJI	CCNNGG	7 cut(s)	42, 165, 612, 855, 2507, 2590, 2591
BsaWI	WCCGGW	1 cut(s)	96
BsaXI	ACNNNNNCTCC	2 cut(s)	146, 176
Bse118I	RCCGGY	2 cut(s)	60, 76
Bse1I	ACTGG	6 cut(s)	563, 669, 1292, 2054, 2584, 2600
Bse21I	CCTNAGG	1 cut(s)	925
Bse3DI	GCAATG	3 cut(s)	714, 2185, 2364
Bse8I	GATNNNNATC	1 cut(s)	468
BseAI	TCCGGA	1 cut(s)	96
BseBI	CCWGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
BseDI	CCNNGG	7 cut(s)	42, 165, 612, 855, 2507, 2590, 2591
BseJI	GATNNNNATC	1 cut(s)	468
BseMI	GCAATG	3 cut(s)	714, 2185, 2364
BseMII	CTCAG	8 cut(s)	717, 939, 1776, 1830, 2364, 2477, 2533, 2648
BseNI	ACTGG	6 cut(s)	563, 669, 1292, 2054, 2584, 2600
BseRI	GAGGAG	5 cut(s)	31, 98, 191, 429, 913
BseSI	GKGCMC	2 cut(s)	2262, 2533
BseX3I	CGGCCG	1 cut(s)	317
BseYI	CCCAGC	1 cut(s)	2532
BsgI	GTGCAG	1 cut(s)	854
Bsh1236I	CGCG	3 cut(s)	253, 266, 623
Bsh1285I	CGRYCG	1 cut(s)	320
BshFI	GGCC	6 cut(s)	37, 221, 319, 408, 1018, 1331
BshNI	GGYRCC	5 cut(s)	111, 329, 929, 1415, 2497
BsiEI	CGRYCG	1 cut(s)	320
BsiSI	CCGG	9 cut(s)	61, 66, 77, 97, 109, 269, 409, 491, 1895
BslFI	GGGAC	4 cut(s)	104, 871, 1620, 2572
BsmAI	GTCTC	5 cut(s)	110, 284, 722, 2522, 2601
BsmBI	CGTCTC	1 cut(s)	722
BsmFI	GGGAC	4 cut(s)	104, 871, 1620, 2572
BsnI	GGCC	6 cut(s)	37, 221, 319, 408, 1018, 1331
Bso31I	GGTCTC	3 cut(s)	284, 2522, 2601
Bsp1286I	GDGCHC	3 cut(s)	1990, 2262, 2533
Bsp13I	TCCGGA	1 cut(s)	96
Bsp19I	CCATGG	1 cut(s)	612
Bsp68I	TCGCGA	1 cut(s)	623
BspANI	GGCC	6 cut(s)	37, 221, 319, 408, 1018, 1331
BspCNI	CTCAG	8 cut(s)	718, 938, 1775, 1829, 2365, 2476, 2532, 2647
BspEI	TCCGGA	1 cut(s)	96
BspFNI	CGCG	3 cut(s)	253, 266, 623
BspHI	TCATGA	1 cut(s)	592
BspMAI	CTGCAG	1 cut(s)	2188
BspOI	GCTAGC	1 cut(s)	1005
BspPI	GGATC	5 cut(s)	471, 563, 1328, 1518, 2165
BspQI	GCTCTTC	1 cut(s)	570
BspT107I	GGYRCC	5 cut(s)	111, 329, 929, 1415, 2497
BspTNI	GGTCTC	3 cut(s)	284, 2522, 2601
BsrDI	GCAATG	3 cut(s)	714, 2185, 2364
BsrFI	RCCGGY	2 cut(s)	60, 76
BsrI	ACTGG	6 cut(s)	563, 669, 1292, 2054, 2584, 2600
BssAI	RCCGGY	2 cut(s)	60, 76
BssECI	CCNNGG	7 cut(s)	42, 165, 612, 855, 2507, 2590, 2591
BssNI	GRCGYC	3 cut(s)	93, 112, 330
BssSI	CACGAG	2 cut(s)	2301, 2325
BssT1I	CCWWGG	4 cut(s)	42, 612, 855, 2507
Bst2BI	CACGAG	2 cut(s)	2301, 2325
Bst2UI	CCWGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
Bst6I	CTCTTC	5 cut(s)	570, 1079, 1533, 1614, 2158
BstACI	GRCGYC	3 cut(s)	93, 112, 330
BstAPI	GCANNNNNTGC	3 cut(s)	1673, 2192, 2195
BstC8I	GCNNGC	5 cut(s)	35, 58, 78, 1003, 1824
BstDSI	CCRYGG	1 cut(s)	612
BstFNI	CGCG	3 cut(s)	253, 266, 623
BstH2I	RGCGCY	2 cut(s)	115, 333
BstHHI	GCGC	4 cut(s)	114, 253, 268, 332
BstMAI	GTCTC	5 cut(s)	110, 284, 722, 2522, 2601
BstMCI	CGRYCG	1 cut(s)	320
BstNI	CCWGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
BstPAI	GACNNNNGTC	1 cut(s)	1134
BstSCI	CCNGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
BstSFI	CTRYAG	4 cut(s)	1020, 1644, 2184, 2214
BstSLI	GKGCMC	2 cut(s)	2262, 2533
BstUI	CGCG	3 cut(s)	253, 266, 623
BstV2I	GAAGAC	3 cut(s)	165, 2090, 2549
BstX2I	RGATCY	2 cut(s)	49, 2271
BstXI	CCANNNNNNTGG	2 cut(s)	1264, 1299
BstYI	RGATCY	2 cut(s)	49, 2271
BstZI	CGGCCG	1 cut(s)	317
Bsu36I	CCTNAGG	1 cut(s)	925
BsuRI	GGCC	6 cut(s)	37, 221, 319, 408, 1018, 1331
BtgI	CCRYGG	1 cut(s)	612
BtgZI	GCGATG	1 cut(s)	696
BtsI	GCAGTG	1 cut(s)	942
BtsIMutI	CAGTG	6 cut(s)	662, 837, 942, 1549, 2262, 2607
BtuMI	TCGCGA	1 cut(s)	623
Cac8I	GCNNGC	5 cut(s)	35, 58, 78, 1003, 1824
CaiI	CAGNNNCTG	4 cut(s)	1502, 2192, 2195, 2477
CciI	TCATGA	1 cut(s)	592
CfoI	GCGC	4 cut(s)	114, 253, 268, 332
Cfr10I	RCCGGY	2 cut(s)	60, 76
Cfr13I	GGNCC	5 cut(s)	63, 406, 1016, 1289, 1836
CpoI	CGGWCCG	1 cut(s)	63
Csp6I	GTAC	7 cut(s)	127, 1397, 1416, 1757, 1845, 1880, 2057
CspI	CGGWCCG	1 cut(s)	63
CviAII	CATG	6 cut(s)	217, 593, 613, 1238, 1861, 2027
CviQI	GTAC	7 cut(s)	127, 1397, 1416, 1757, 1845, 1880, 2057
DinI	GGCGCC	2 cut(s)	113, 331
DraI	TTTAAA	2 cut(s)	2233, 2571
EaeI	YGGCCR	2 cut(s)	219, 317
EagI	CGGCCG	1 cut(s)	317
Eam1104I	CTCTTC	5 cut(s)	570, 1079, 1533, 1614, 2158
EarI	CTCTTC	5 cut(s)	570, 1079, 1533, 1614, 2158
EciI	GGCGGA	3 cut(s)	95, 257, 2093
EclXI	CGGCCG	1 cut(s)	317
Eco130I	CCWWGG	4 cut(s)	42, 612, 855, 2507
Eco147I	AGGCCT	1 cut(s)	1331
Eco24I	GRGCYC	1 cut(s)	1990
Eco31I	GGTCTC	3 cut(s)	284, 2522, 2601
Eco47I	GGWCC	3 cut(s)	63, 1289, 1836
Eco52I	CGGCCG	1 cut(s)	317
Eco57I	CTGAAG	5 cut(s)	329, 1479, 1554, 1853, 2031
Eco81I	CCTNAGG	1 cut(s)	925
EcoRII	CCWGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
EcoT14I	CCWWGG	4 cut(s)	42, 612, 855, 2507
EcoT38I	GRGCYC	1 cut(s)	1990
EgeI	GGCGCC	2 cut(s)	113, 331
EheI	GGCGCC	2 cut(s)	113, 331
ErhI	CCWWGG	4 cut(s)	42, 612, 855, 2507
Esp3I	CGTCTC	1 cut(s)	722
FaeI	CATG	6 cut(s)	220, 596, 616, 1241, 1864, 2030
FalI	AAGNNNNNCTT	2 cut(s)	2541, 2573
FaqI	GGGAC	4 cut(s)	104, 871, 1620, 2572
FatI	CATG	6 cut(s)	216, 592, 612, 1237, 1860, 2026
FauNDI	CATATG	2 cut(s)	1252, 2418
FbaI	TGATCA	1 cut(s)	1170
FblI	GTMKAC	2 cut(s)	1090, 1407
FriOI	GRGCYC	1 cut(s)	1990
FspBI	CTAG	7 cut(s)	767, 1002, 1055, 1524, 1602, 1992, 2487
GlaI	GCGC	4 cut(s)	113, 252, 267, 331
GsaI	CCCAGC	1 cut(s)	2536
GsuI	CTGGAG	3 cut(s)	426, 2547, 2583
HaeII	RGCGCY	2 cut(s)	115, 333
HaeIII	GGCC	6 cut(s)	37, 221, 319, 408, 1018, 1331
HapII	CCGG	9 cut(s)	61, 66, 77, 97, 109, 269, 409, 491, 1895
HhaI	GCGC	4 cut(s)	114, 253, 268, 332
Hin1I	GRCGYC	3 cut(s)	93, 112, 330
Hin1II	CATG	6 cut(s)	220, 596, 616, 1241, 1864, 2030
Hin6I	GCGC	4 cut(s)	112, 251, 266, 330
HinP1I	GCGC	4 cut(s)	112, 251, 266, 330
HincII	GTYRAC	2 cut(s)	2145, 2629
HindII	GTYRAC	2 cut(s)	2145, 2629
HindIII	AAGCTT	2 cut(s)	524, 2013
HpaII	CCGG	9 cut(s)	61, 66, 77, 97, 109, 269, 409, 491, 1895
HphI	GGTGA	6 cut(s)	389, 640, 714, 1217, 1797, 2434
Hpy166II	GTNNAC	5 cut(s)	129, 1091, 1408, 2145, 2629
Hpy8I	GTNNAC	5 cut(s)	129, 1091, 1408, 2145, 2629
Hpy99I	CGWCG	6 cut(s)	146, 284, 389, 463, 628, 1140
HpyAV	CCTTC	2 cut(s)	765, 1054
HpyCH4IV	ACGT	2 cut(s)	93, 503
HpySE526I	ACGT	2 cut(s)	93, 503
Hsp92I	GRCGYC	3 cut(s)	93, 112, 330
Hsp92II	CATG	6 cut(s)	220, 596, 616, 1241, 1864, 2030
HspAI	GCGC	4 cut(s)	112, 251, 266, 330
KasI	GGCGCC	2 cut(s)	111, 329
Kpn2I	TCCGGA	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	1419
KroI	GCCGGC	1 cut(s)	76
KroNI	GCCGGC	1 cut(s)	78
Ksp22I	TGATCA	1 cut(s)	1170
LguI	GCTCTTC	1 cut(s)	570
LmnI	GCTCC	5 cut(s)	650, 983, 1260, 1993, 2035
LweI	GCATC	5 cut(s)	616, 758, 1319, 1881, 2234
MaeI	CTAG	7 cut(s)	767, 1002, 1055, 1524, 1602, 1992, 2487
MaeII	ACGT	2 cut(s)	93, 503
MaeIII	GTNAC	3 cut(s)	254, 1519, 2048
MfeI	CAATTG	1 cut(s)	2121
MflI	RGATCY	2 cut(s)	49, 2271
MhlI	GDGCHC	3 cut(s)	1990, 2262, 2533
MlsI	TGGCCA	1 cut(s)	221
MluNI	TGGCCA	1 cut(s)	221
Mly113I	GGCGCC	2 cut(s)	112, 330
MlyI	GAGTC	7 cut(s)	155, 251, 281, 413, 1096, 2080, 2624
MmeI	TCCRAC	7 cut(s)	303, 441, 486, 998, 1412, 2276, 2417
Mox20I	TGGCCA	1 cut(s)	221
MreI	CGCCGGCG	1 cut(s)	76
MroI	TCCGGA	1 cut(s)	96
MroNI	GCCGGC	1 cut(s)	76
MroXI	GAANNNNTTC	2 cut(s)	579, 2556
MscI	TGGCCA	1 cut(s)	221
Msp20I	TGGCCA	1 cut(s)	221
MspA1I	CMGCKG	4 cut(s)	239, 307, 2192, 2477
MspI	CCGG	9 cut(s)	61, 66, 77, 97, 109, 269, 409, 491, 1895
MspR9I	CCNGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
MunI	CAATTG	1 cut(s)	2121
MvaI	CCWGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
MvnI	CGCG	3 cut(s)	253, 266, 623
NaeI	GCCGGC	1 cut(s)	78
NarI	GGCGCC	2 cut(s)	112, 330
NcoI	CCATGG	1 cut(s)	612
NdeI	CATATG	2 cut(s)	1252, 2418
NgoMIV	GCCGGC	1 cut(s)	76
NheI	GCTAGC	1 cut(s)	1001
NlaIII	CATG	6 cut(s)	220, 596, 616, 1241, 1864, 2030
NmuCI	GTSAC	2 cut(s)	254, 2048
NruI	TCGCGA	1 cut(s)	623
PagI	TCATGA	1 cut(s)	592
PasI	CCCWGGG	1 cut(s)	2591
PceI	AGGCCT	1 cut(s)	1331
PciSI	GCTCTTC	1 cut(s)	570
PcsI	WCGNNNNNNNCGW	4 cut(s)	162, 348, 357, 455
PdiI	GCCGGC	1 cut(s)	78
PdmI	GAANNNNTTC	2 cut(s)	579, 2556
PfeI	GAWTC	9 cut(s)	71, 514, 1181, 1272, 1463, 1864, 1898, 1960, 2282
PfoI	TCCNGGA	1 cut(s)	442
PleI	GAGTC	7 cut(s)	155, 251, 280, 413, 1095, 2080, 2624
PluTI	GGCGCC	2 cut(s)	115, 333
PpsI	GAGTC	7 cut(s)	155, 251, 280, 413, 1095, 2080, 2624
PshAI	GACNNNNGTC	1 cut(s)	1134
PshBI	ATTAAT	1 cut(s)	2310
Psp1406I	AACGTT	1 cut(s)	503
Psp6I	CCWGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
PspFI	CCCAGC	1 cut(s)	2532
PspGI	CCWGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
PspPI	GGNCC	5 cut(s)	63, 406, 1016, 1289, 1836
PsrI	GAACNNNNNNTAC	2 cut(s)	1317, 1349
PstI	CTGCAG	1 cut(s)	2188
PstNI	CAGNNNCTG	4 cut(s)	1502, 2192, 2195, 2477
PsuI	RGATCY	2 cut(s)	49, 2271
PvuII	CAGCTG	2 cut(s)	2192, 2477
RruI	TCGCGA	1 cut(s)	623
RsaI	GTAC	7 cut(s)	128, 1398, 1417, 1758, 1846, 1881, 2058
RsaNI	GTAC	7 cut(s)	127, 1397, 1416, 1757, 1845, 1880, 2057
Rsr2I	CGGWCCG	1 cut(s)	63
RsrII	CGGWCCG	1 cut(s)	63
SapI	GCTCTTC	1 cut(s)	570
Sau96I	GGNCC	5 cut(s)	63, 406, 1016, 1289, 1836
SchI	GAGTC	7 cut(s)	155, 251, 281, 413, 1096, 2080, 2624
ScrFI	CCNGG	6 cut(s)	444, 1258, 1265, 1705, 2592, 2648
SduI	GDGCHC	3 cut(s)	1990, 2262, 2533
SfaNI	GCATC	5 cut(s)	616, 758, 1319, 1881, 2234
SfcI	CTRYAG	4 cut(s)	1020, 1644, 2184, 2214
SfoI	GGCGCC	2 cut(s)	113, 331
SgrAI	CRCCGGYG	1 cut(s)	76
SinI	GGWCC	3 cut(s)	63, 1289, 1836
SmiI	ATTTAAAT	1 cut(s)	2571
SseBI	AGGCCT	1 cut(s)	1331
SspDI	GGCGCC	2 cut(s)	111, 329
SspI	AATATT	3 cut(s)	1188, 1247, 2575
SspMI	CTAG	7 cut(s)	767, 1002, 1055, 1524, 1602, 1992, 2487
StuI	AGGCCT	1 cut(s)	1331
StyD4I	CCNGG	6 cut(s)	442, 1256, 1263, 1703, 2590, 2646
StyI	CCWWGG	4 cut(s)	42, 612, 855, 2507
SwaI	ATTTAAAT	1 cut(s)	2571
TaiI	ACGT	2 cut(s)	96, 506
TaqI	TCGA	8 cut(s)	186, 519, 567, 1270, 1323, 1368, 1853, 2446
TaqII	GACCGA	1 cut(s)	308
TatI	WGTACW	3 cut(s)	126, 1396, 2056
TauI	GCSGC	7 cut(s)	242, 251, 307, 319, 454, 457, 2503
TfiI	GAWTC	9 cut(s)	71, 514, 1181, 1272, 1463, 1864, 1898, 1960, 2282
TscAI	CASTG	6 cut(s)	669, 837, 949, 1556, 2262, 2607
TseFI	GTSAC	2 cut(s)	254, 2048
Tsp45I	GTSAC	2 cut(s)	254, 2048
TspGWI	ACGGA	1 cut(s)	474
TspRI	CASTG	6 cut(s)	669, 837, 949, 1556, 2262, 2607
VpaK11BI	GGWCC	3 cut(s)	63, 1289, 1836
VspI	ATTAAT	1 cut(s)	2310
XapI	RAATTY	5 cut(s)	779, 850, 1349, 1445, 2319
XbaI	TCTAGA	1 cut(s)	1054
XmiI	GTMKAC	2 cut(s)	1090, 1407
XmnI	GAANNNNTTC	2 cut(s)	579, 2556
XspI	CTAG	7 cut(s)	767, 1002, 1055, 1524, 1602, 1992, 2487
ZraI	GACGTC	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.