Rroxscaffold_1G00040990

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0007816
Physical Location & Seq
Forward (+)
58772308 .. 58778439
6132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00040990.1

Sequence Viewer

Length: 2355 bp
ATGGCCAAGCTGAATCCGATAGCGGCGGAGGCGGCGCGTGACTCCCACGCGCCGGAGTCGTCCGACGAGGACGAGACCGAGAGGAAGCCGCTGAAGAAGCGGCCGATCAACGGCGCCGATAAGGACGAGGATGACGAAGATTACGAAGAAAATGACGGCGGTGATGACGACGATGACTGTGAGGAACGGGGCCGGAAAGCAGACTCCAAGCAACTCAATTCTTCTCCAGGAACGCCGCCGCCGTCGGATCACCATCAGTCTGTCATTCCGTTGCCGGATAAGAAAACGTTGGAGTTGATTCTCGACAAGCTTCAAAAGAAAGATACTTATGGCGTGTATGCAGAACCAGTTGATCCTGAAGAGCTTCCTGACTATCATGATGTCATTGAGCATCCCATGGATTTCGCGACGGTGAGGAAGCAGTTGGCAAATGGAACCTATTCTACACTGGAACAATTTGAGAGAGATGTCTTTTTAATATGTTCAAACGCAATGCAATACAATTCACCTGAGACGATATACCATAAACAGGCATCTTCTATACAAGAGCTAGGAAGGAGAAAATTTGAGAGGTTAAGAATTGACTATGAACGATCAGAAAAGGAGATCAAATCAGTGCAGAAAACAAAGTCAAATTCCTTGGTAAAGAAACAGATAAAGAAGCCACTGTCCCGAACATTACAGGAACCCATTGGCTCTGATTTCTCCTCAGGTGCCACTCTTGCCACTGCTTCCGAAGTCCAGAACAGTTCCCATCCAACACAAGGAGCTGGTTGTGAGAGAGCTAGCAACATTGATGGGCCTGTAGAGGGTAATTCATCCTTGAATGAAGCTAATCTAGAGAAGGCTGAAGAAATGCTATCAGGGAAGAGTCTACCATCTAAAGTTGGGAAGAAGCCATCTGTGTTTGATGACAACCGTCGTGCAACCTATAACATATCCAATCAGCCTGTGATCACATCAGAATCAATATTCACAACCTTTGAGGGTGAAATCAAGCAGTTTGTTGCAGTCGGGCTTCATGCAGAATATTCATATGCCAGGAGCCTGGCTCGATTCTCTGGAAGTCTTGGACCAGTTGCTTGGAAAGTTGCATCAAAGAGAATCGAACAGGCCTTACCTGATGGATGTAAATTTGGTCGTGGATGGGTCGAAGAATATGAGCCACTTCCAACCCCTGTACTGATGGTAGACAAAGGTACCCAAAATCAATCTGCTTTGGCTGCAAAATTCTTTTCACACATTGAATCAAGAAAGGATGATAGAACTTTAAGGACTTCAGTTCCTGCTAAGGATCGCCCTGTTACTAGGTCTGTTATAGAAGAGAGACAGCACTGTGTTAGTGTTCCTACTTCAGCGGGGAAACCATCGTTTTTTGGTTCTTCTAGGGGACATTACTCAGAAGAGAAACTGCCTGTTATTAGTTCTGTTGGAGGAAAAGGGGGTAATGCAGTTAATGCCATTCATAAGCAGCAAAATCCACAATCCAGGTTTAGTGAGAGTGGGAAACAGGTTCCGAAGAAAGTTGAGTTGAACTCTGTACCCTCAGTTAATCAAAATAATGCCAACCTTGTTGCTGAAAAGCAATCACCAAGAAACTCAGAGCCAGCAGCTTCAAGGTCCAGAGGTACGTCATCGAGGAACATGAATCTTCAGCAGTCTGTACCTTTTAAGATGCCGGATTCTAATGGTGTTATTACCTCACGGTTGCCTAATGGGAAAGGTATGAGTGCTTGTATGGAGAATCGGATGATTGGTTCTTCTGATAGGGCTCCTAGCCAAATGGAAAGAACTGAAGCTTATATTCCTCATGCACAGGAGCAGGGTCTTAGTGACCCAGTACAGTTGATGAAAAAATTGGCGGAGAAGACTCAAAACCAACAGCAGTCATCAATTCAATCGTCAATTGATACTAAACCTGTCGTGTCATCGGTTCCATCAATGAGAAGAGATGATCCAAGCAATGCTGCAGCAGCTGCTGCTCGTGCTTGGATGTCTATAGGGGGTGCATCCTTTAAACAGCCAACAGACAATCTGACAGTGCCCAAAAGTCAGATCTATGCAGATTCATTATATAACCCATCACGAGAGATTCATTCACAAATTTCACGAGTTCGGGGGGAGGTTCCTAATTCTGGTGCAATGCAATTTCAGACTGAGAACAATTTTTCATTTCCAACTTTTTTACCACGGCCTGTTCATATGGTGAATGAACCACAGTTCCAAAATCGACCTATATTTTTCCCTCAGTTGGCAGCAGCTGATTTGTCTAGGTTTCAGGTGCCGCCCCTTGGAGGGGTCTCAGTCCTTGTGCCCAGCCAAGACAGAAACAAGAATGTCTTCCTCCAGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain

Protein Analysis

784

Amino Acids

86.53

Weight (kDa)

6.61

Isoelectric Point (pI)

60.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 100 - 179 8.5e-25 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1199
AccB1I GGYRCC 4 cut(s) 113, 713, 1199, 2281
AccI GTMKAC 2 cut(s) 874, 1191
AccII CGCG 3 cut(s) 37, 50, 407
AclI AACGTT 1 cut(s) 287
AclWI GGATC 4 cut(s) 255, 347, 1302, 1949
AcoI YGGCCR 2 cut(s) 3, 101
AcsI RAATTY 5 cut(s) 563, 634, 1133, 1229, 2103
AcuI CTGAAG 7 cut(s) 113, 378, 870, 1263, 1338, 1637, 1815
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 6 cut(s) 1182, 1201, 1542, 1630, 1665, 1842
AgsI TTSAA 7 cut(s) 314, 486, 826, 1247, 1534, 1617, 1898
AjnI CCWGG 4 cut(s) 226, 1040, 1047, 1487
AloI GAACNNNNNNTCC 4 cut(s) 1741, 1773, 2205, 2237
Alw26I GTCTC 4 cut(s) 68, 506, 1321, 2305
AlwI GGATC 4 cut(s) 255, 347, 1302, 1949
AlwNI CAGNNNCTG 4 cut(s) 1286, 1976, 1979, 2261
AoxI GGCC 6 cut(s) 3, 101, 190, 800, 1113, 2192
ApoI RAATTY 5 cut(s) 563, 634, 1133, 1229, 2103
Asp700I GAANNNNTTC 3 cut(s) 363, 439, 2339
Asp718I GGTACC 1 cut(s) 1199
AspLEI GCGC 3 cut(s) 37, 52, 116
AspS9I GGNCC 4 cut(s) 190, 800, 1073, 1620
AsuHPI GGTGA 7 cut(s) 173, 242, 424, 498, 1001, 1581, 2218
AsuNHI GCTAGC 1 cut(s) 785
AvaII GGWCC 2 cut(s) 1073, 1620
AxyI CCTNAGG 1 cut(s) 709
BaeGI GKGCMC 2 cut(s) 2046, 2316
BaeI ACNNNNGTAYC 2 cut(s) 1183, 1216
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 4 cut(s) 113, 713, 1199, 2281
BanII GRGCYC 1 cut(s) 1774
BauI CACGAG 3 cut(s) 1983, 2085, 2109
BbsI GAAGAC 2 cut(s) 1874, 2332
BceAI ACGGC 4 cut(s) 127, 172, 226, 2207
BciT130I CCWGG 4 cut(s) 228, 1042, 1049, 1489
BclI TGATCA 1 cut(s) 954
BcoDI GTCTC 4 cut(s) 68, 506, 1321, 2305
BfaI CTAG 7 cut(s) 551, 786, 839, 1308, 1386, 1776, 2271
BfmI CTRYAG 3 cut(s) 804, 1968, 1998
BfoI RGCGCY 1 cut(s) 117
BglII AGATCT 1 cut(s) 2055
Bme1390I CCNGG 4 cut(s) 228, 1042, 1049, 1489
Bme18I GGWCC 2 cut(s) 1073, 1620
BmgT120I GGNCC 4 cut(s) 190, 800, 1073, 1620
BmrFI CCNGG 4 cut(s) 228, 1042, 1049, 1489
BmrI ACTGGG 1 cut(s) 1832
BmsI GCATC 5 cut(s) 400, 542, 1103, 1665, 2018
BmtI GCTAGC 1 cut(s) 789
BmuI ACTGGG 1 cut(s) 1832
BoxI GACNNNNGTC 1 cut(s) 918
BpiI GAAGAC 2 cut(s) 1874, 2332
BplI GAGNNNNNCTC 4 cut(s) 1036, 1068, 1520, 1552
BpmI CTGGAG 2 cut(s) 210, 2330
Bpu10I CCTNAGC 1 cut(s) 1290
BsaBI GATNNNNATC 1 cut(s) 252
BsaHI GRCGYC 1 cut(s) 114
BsaI GGTCTC 2 cut(s) 68, 2305
BsaJI CCNNGG 4 cut(s) 396, 639, 2189, 2290
Bse1I ACTGG 4 cut(s) 347, 453, 1076, 1838
Bse21I CCTNAGG 1 cut(s) 709
Bse3DI GCAATG 3 cut(s) 498, 1969, 2148
Bse8I GATNNNNATC 1 cut(s) 252
BseBI CCWGG 4 cut(s) 228, 1042, 1049, 1489
BseDI CCNNGG 4 cut(s) 396, 639, 2189, 2290
BseJI GATNNNNATC 1 cut(s) 252
BseMI GCAATG 3 cut(s) 498, 1969, 2148
BseMII CTCAG 8 cut(s) 501, 723, 1413, 1560, 1614, 2148, 2261, 2316
BseNI ACTGG 4 cut(s) 347, 453, 1076, 1838
BseRI GAGGAG 1 cut(s) 697
BseSI GKGCMC 2 cut(s) 2046, 2316
BseX3I CGGCCG 1 cut(s) 101
BseYI CCCAGC 1 cut(s) 2315
BsgI GTGCAG 1 cut(s) 638
Bsh1236I CGCG 3 cut(s) 37, 50, 407
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 6 cut(s) 5, 103, 192, 802, 1115, 2194
BshNI GGYRCC 4 cut(s) 113, 713, 1199, 2281
BsiEI CGRYCG 1 cut(s) 104
BsiSI CCGG 4 cut(s) 53, 193, 275, 1679
BslFI GGGAC 2 cut(s) 655, 1404
BsmAI GTCTC 4 cut(s) 68, 506, 1321, 2305
BsmBI CGTCTC 1 cut(s) 506
BsmFI GGGAC 2 cut(s) 655, 1404
BsnI GGCC 6 cut(s) 5, 103, 192, 802, 1115, 2194
Bso31I GGTCTC 2 cut(s) 68, 2305
Bsp1286I GDGCHC 3 cut(s) 1774, 2046, 2316
Bsp143I GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
Bsp19I CCATGG 1 cut(s) 396
Bsp68I TCGCGA 1 cut(s) 407
BspANI GGCC 6 cut(s) 5, 103, 192, 802, 1115, 2194
BspCNI CTCAG 8 cut(s) 502, 722, 1412, 1559, 1613, 2149, 2260, 2315
BspFNI CGCG 3 cut(s) 37, 50, 407
BspHI TCATGA 1 cut(s) 376
BspMAI CTGCAG 1 cut(s) 1972
BspOI GCTAGC 1 cut(s) 789
BspPI GGATC 4 cut(s) 255, 347, 1302, 1949
BspQI GCTCTTC 1 cut(s) 354
BspT107I GGYRCC 4 cut(s) 113, 713, 1199, 2281
BspTNI GGTCTC 2 cut(s) 68, 2305
BsrDI GCAATG 3 cut(s) 498, 1969, 2148
BsrI ACTGG 4 cut(s) 347, 453, 1076, 1838
BssECI CCNNGG 4 cut(s) 396, 639, 2189, 2290
BssMI GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
BssNI GRCGYC 1 cut(s) 114
BssSI CACGAG 3 cut(s) 1983, 2085, 2109
BssT1I CCWWGG 3 cut(s) 396, 639, 2290
Bst2BI CACGAG 3 cut(s) 1983, 2085, 2109
Bst2UI CCWGG 4 cut(s) 228, 1042, 1049, 1489
Bst6I CTCTTC 5 cut(s) 354, 863, 1317, 1398, 1942
BstACI GRCGYC 1 cut(s) 114
BstAPI GCANNNNNTGC 3 cut(s) 1457, 1976, 1979
BstC8I GCNNGC 2 cut(s) 787, 1608
BstDSI CCRYGG 2 cut(s) 396, 2189
BstFNI CGCG 3 cut(s) 37, 50, 407
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 3 cut(s) 37, 52, 116
BstKTI GATC 9 cut(s) 108, 250, 355, 596, 609, 957, 1297, 1957, 2058
BstMAI GTCTC 4 cut(s) 68, 506, 1321, 2305
BstMBI GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
BstMCI CGRYCG 1 cut(s) 104
BstNI CCWGG 4 cut(s) 228, 1042, 1049, 1489
BstPAI GACNNNNGTC 1 cut(s) 918
BstSCI CCNGG 4 cut(s) 226, 1040, 1047, 1487
BstSFI CTRYAG 3 cut(s) 804, 1968, 1998
BstSLI GKGCMC 2 cut(s) 2046, 2316
BstUI CGCG 3 cut(s) 37, 50, 407
BstV2I GAAGAC 2 cut(s) 1874, 2332
BstX2I RGATCY 1 cut(s) 2055
BstXI CCANNNNNNTGG 2 cut(s) 1048, 1083
BstYI RGATCY 1 cut(s) 2055
BstZI CGGCCG 1 cut(s) 101
Bsu36I CCTNAGG 1 cut(s) 709
BsuRI GGCC 6 cut(s) 5, 103, 192, 802, 1115, 2194
BtgI CCRYGG 2 cut(s) 396, 2189
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 6 cut(s) 446, 621, 665, 726, 1333, 2046
BtuMI TCGCGA 1 cut(s) 407
Cac8I GCNNGC 2 cut(s) 787, 1608
CaiI CAGNNNCTG 4 cut(s) 1286, 1976, 1979, 2261
CciI TCATGA 1 cut(s) 376
CfoI GCGC 3 cut(s) 37, 52, 116
Cfr13I GGNCC 4 cut(s) 190, 800, 1073, 1620
Csp6I GTAC 6 cut(s) 1181, 1200, 1541, 1629, 1664, 1841
CviAII CATG 5 cut(s) 377, 397, 1022, 1645, 1811
CviQI GTAC 6 cut(s) 1181, 1200, 1541, 1629, 1664, 1841
DinI GGCGCC 1 cut(s) 115
DpnI GATC 9 cut(s) 107, 249, 354, 595, 608, 956, 1296, 1956, 2057
DpnII GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
DraI TTTAAA 1 cut(s) 2017
EaeI YGGCCR 2 cut(s) 3, 101
EagI CGGCCG 1 cut(s) 101
Eam1104I CTCTTC 5 cut(s) 354, 863, 1317, 1398, 1942
EarI CTCTTC 5 cut(s) 354, 863, 1317, 1398, 1942
EciI GGCGGA 2 cut(s) 41, 1877
EclXI CGGCCG 1 cut(s) 101
Eco130I CCWWGG 3 cut(s) 396, 639, 2290
Eco147I AGGCCT 1 cut(s) 1115
Eco24I GRGCYC 1 cut(s) 1774
Eco31I GGTCTC 2 cut(s) 68, 2305
Eco47I GGWCC 2 cut(s) 1073, 1620
Eco52I CGGCCG 1 cut(s) 101
Eco57I CTGAAG 7 cut(s) 113, 378, 870, 1263, 1338, 1637, 1815
Eco81I CCTNAGG 1 cut(s) 709
EcoRII CCWGG 4 cut(s) 226, 1040, 1047, 1487
EcoT14I CCWWGG 3 cut(s) 396, 639, 2290
EcoT38I GRGCYC 1 cut(s) 1774
EgeI GGCGCC 1 cut(s) 115
EheI GGCGCC 1 cut(s) 115
ErhI CCWWGG 3 cut(s) 396, 639, 2290
Esp3I CGTCTC 1 cut(s) 506
FaeI CATG 5 cut(s) 380, 400, 1025, 1648, 1814
FalI AAGNNNNNCTT 1 cut(s) 2324
FaqI GGGAC 2 cut(s) 655, 1404
FatI CATG 5 cut(s) 376, 396, 1021, 1644, 1810
FauI CCCGC 1 cut(s) 1351
FauNDI CATATG 2 cut(s) 1036, 2202
FbaI TGATCA 1 cut(s) 954
FblI GTMKAC 2 cut(s) 874, 1191
FriOI GRGCYC 1 cut(s) 1774
FspBI CTAG 7 cut(s) 551, 786, 839, 1308, 1386, 1776, 2271
GlaI GCGC 3 cut(s) 36, 51, 115
GsaI CCCAGC 1 cut(s) 2319
GsuI CTGGAG 2 cut(s) 210, 2330
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 6 cut(s) 5, 103, 192, 802, 1115, 2194
HapII CCGG 4 cut(s) 53, 193, 275, 1679
HhaI GCGC 3 cut(s) 37, 52, 116
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 5 cut(s) 380, 400, 1025, 1648, 1814
Hin6I GCGC 3 cut(s) 35, 50, 114
HinP1I GCGC 3 cut(s) 35, 50, 114
HindIII AAGCTT 2 cut(s) 308, 1797
HpaII CCGG 4 cut(s) 53, 193, 275, 1679
HphI GGTGA 7 cut(s) 173, 242, 424, 498, 1001, 1581, 2218
Hpy166II GTNNAC 2 cut(s) 875, 1192
Hpy8I GTNNAC 2 cut(s) 875, 1192
Hpy99I CGWCG 5 cut(s) 68, 173, 247, 412, 924
HpyAV CCTTC 2 cut(s) 549, 838
HpyCH4IV ACGT 2 cut(s) 287, 1631
HpySE526I ACGT 2 cut(s) 287, 1631
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 5 cut(s) 380, 400, 1025, 1648, 1814
HspAI GCGC 3 cut(s) 35, 50, 114
KasI GGCGCC 1 cut(s) 113
KpnI GGTACC 1 cut(s) 1203
Ksp22I TGATCA 1 cut(s) 954
Kzo9I GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
LguI GCTCTTC 1 cut(s) 354
LmnI GCTCC 4 cut(s) 767, 1044, 1777, 1819
LweI GCATC 5 cut(s) 400, 542, 1103, 1665, 2018
MaeI CTAG 7 cut(s) 551, 786, 839, 1308, 1386, 1776, 2271
MaeII ACGT 2 cut(s) 287, 1631
MaeIII GTNAC 3 cut(s) 38, 1303, 1832
MalI GATC 9 cut(s) 107, 249, 354, 595, 608, 956, 1296, 1956, 2057
MboI GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
MfeI CAATTG 1 cut(s) 1905
MflI RGATCY 1 cut(s) 2055
MhlI GDGCHC 3 cut(s) 1774, 2046, 2316
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 114
MlyI GAGTC 5 cut(s) 35, 65, 197, 880, 1864
MmeI TCCRAC 7 cut(s) 87, 225, 270, 782, 1196, 1411, 2201
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 3 cut(s) 363, 439, 2339
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 476, 575, 1271, 1455, 1551, 1671, 2016, 2353
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 4 cut(s) 91, 1358, 1976, 2261
MspI CCGG 4 cut(s) 53, 193, 275, 1679
MspR9I CCNGG 4 cut(s) 228, 1042, 1049, 1489
MunI CAATTG 1 cut(s) 1905
MvaI CCWGG 4 cut(s) 228, 1042, 1049, 1489
MvnI CGCG 3 cut(s) 37, 50, 407
NarI GGCGCC 1 cut(s) 114
NcoI CCATGG 1 cut(s) 396
NdeI CATATG 2 cut(s) 1036, 2202
NdeII GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
NheI GCTAGC 1 cut(s) 785
NlaIII CATG 5 cut(s) 380, 400, 1025, 1648, 1814
NmuCI GTSAC 2 cut(s) 38, 1832
NruI TCGCGA 1 cut(s) 407
PagI TCATGA 1 cut(s) 376
PceI AGGCCT 1 cut(s) 1115
PciSI GCTCTTC 1 cut(s) 354
PcsI WCGNNNNNNNCGW 3 cut(s) 132, 141, 239
PdmI GAANNNNTTC 3 cut(s) 363, 439, 2339
PfoI TCCNGGA 1 cut(s) 226
PleI GAGTC 5 cut(s) 35, 64, 197, 879, 1864
PluTI GGCGCC 1 cut(s) 117
PpsI GAGTC 5 cut(s) 35, 64, 197, 879, 1864
PshAI GACNNNNGTC 1 cut(s) 918
Psp1406I AACGTT 1 cut(s) 287
Psp6I CCWGG 4 cut(s) 226, 1040, 1047, 1487
PspFI CCCAGC 1 cut(s) 2315
PspGI CCWGG 4 cut(s) 226, 1040, 1047, 1487
PspPI GGNCC 4 cut(s) 190, 800, 1073, 1620
PsrI GAACNNNNNNTAC 4 cut(s) 427, 459, 1101, 1133
PstI CTGCAG 1 cut(s) 1972
PstNI CAGNNNCTG 4 cut(s) 1286, 1976, 1979, 2261
PsuI RGATCY 1 cut(s) 2055
PvuII CAGCTG 2 cut(s) 1976, 2261
RruI TCGCGA 1 cut(s) 407
RsaI GTAC 6 cut(s) 1182, 1201, 1542, 1630, 1665, 1842
RsaNI GTAC 6 cut(s) 1181, 1200, 1541, 1629, 1664, 1841
SapI GCTCTTC 1 cut(s) 354
SaqAI TTAA 8 cut(s) 476, 575, 1271, 1455, 1551, 1671, 2016, 2353
Sau3AI GATC 9 cut(s) 105, 247, 352, 593, 606, 954, 1294, 1954, 2055
Sau96I GGNCC 4 cut(s) 190, 800, 1073, 1620
SchI GAGTC 5 cut(s) 35, 65, 197, 880, 1864
ScrFI CCNGG 4 cut(s) 228, 1042, 1049, 1489
SduI GDGCHC 3 cut(s) 1774, 2046, 2316
SfaNI GCATC 5 cut(s) 400, 542, 1103, 1665, 2018
SfcI CTRYAG 3 cut(s) 804, 1968, 1998
SfoI GGCGCC 1 cut(s) 115
SinI GGWCC 2 cut(s) 1073, 1620
SseBI AGGCCT 1 cut(s) 1115
SspDI GGCGCC 1 cut(s) 113
SspI AATATT 2 cut(s) 972, 1031
SspMI CTAG 7 cut(s) 551, 786, 839, 1308, 1386, 1776, 2271
StuI AGGCCT 1 cut(s) 1115
StyD4I CCNGG 4 cut(s) 226, 1040, 1047, 1487
StyI CCWWGG 3 cut(s) 396, 639, 2290
TaiI ACGT 2 cut(s) 290, 1634
TaqI TCGA 6 cut(s) 303, 1054, 1107, 1152, 1637, 2230
TaqII GACCGA 1 cut(s) 92
TatI WGTACW 2 cut(s) 1180, 1840
TauI GCSGC 7 cut(s) 26, 35, 91, 103, 238, 241, 2287
Tru1I TTAA 8 cut(s) 476, 575, 1271, 1455, 1551, 1671, 2016, 2353
Tru9I TTAA 8 cut(s) 476, 575, 1271, 1455, 1551, 1671, 2016, 2353
TscAI CASTG 6 cut(s) 453, 621, 672, 733, 1340, 2046
TseFI GTSAC 2 cut(s) 38, 1832
Tsp45I GTSAC 2 cut(s) 38, 1832
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 6 cut(s) 453, 621, 672, 733, 1340, 2046
VpaK11BI GGWCC 2 cut(s) 1073, 1620
XapI RAATTY 5 cut(s) 563, 634, 1133, 1229, 2103
XbaI TCTAGA 1 cut(s) 838
XmiI GTMKAC 2 cut(s) 874, 1191
XmnI GAANNNNTTC 3 cut(s) 363, 439, 2339
XspI CTAG 7 cut(s) 551, 786, 839, 1308, 1386, 1776, 2271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.