Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007816

Physical Location & Seq

Genomic Coordinates Forward (+)

21245142 .. 21250477

Gene Structure 5336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g19000.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGGAGGCCATCGAAAGCAGATCTGGCTCGCCGGCACGGCGAGTTGCCGGAAAAACCGACAAAGAAAGATTCGGACGTCCGGCGGAGCCTCCGACGGAGAAATGCGAAGTACAATATCGACTACGACGACTACGTGGACGAGGAAGACGAGGAAGACGAAGAAGAAGACGAGAGGAGGAGGGAGAAGAAGGTGAAGCTGGTGATGAAGCTCGACCAGAGGGGAAATGGCTCGGCGCGTGACTCCCACGCGCAGGAGTCTGGCGGCGAGGAGGATGAGGAGGACGGCCAGAGTGAGAGGAAGCAGCTGAAGAGGCGCCGGATTAACGGCGGCGATGATTCCGATAGAGATGATGACGGAAATGAAGACGACGATGAGGGGGATAATGATTGCGAGGAACGGGGTCGGAAAGCTGACTCGAAGCGGCCTGATTCCCCTCCAGGAACGCCGTATGATCCTCATGCCGCAATTCCGTTGCCGGATAAGAAGACGTTGGAGTTGATTCTTGACAAACTTCAAAAGAAAGACACTTACGGTGTATATGCAGAACCAGTTGATCCTGAAGAGCTTCCTGATTATCATGAGGTCATTGAGCGTCCAATGGACTTTGCCACGGTGAGAAAGCAGTTAGCAAATGGATCGTATTCTACACTGGAACAATTTGAGGGTGATGTCTTTTTAATATGTTCAAATGCAATGGAATACAATTCATCAGATACAATATACTATAAACAGGCATGTTCAATACAAGAGCTGGCAAAGAGAAAATTTGATAGGTTGCGAAGTGACTATGAACGCTCGGAAAAGGAGCTCAAATTAGTGCAGAAAACAAAGTCCAATTCCTTGGTCAAGAAACAGACAAAGAAGCCTTTGTCCAGAACATTACAGGAACCCATTGGCTCTGATTTCTCCTCAGGTGCCACTCTTGCTACTGCTGTAGATGTCCAGAATGTTTCCCTTCCAGTTCCAACACAGGGTGGTGGTTGTGAGAGACCTAGCAACATTGACGGACCTGTAGAGGGTAATTCCTCTTTGAATGAAGCTAATGTGGAGAAGGCAGAAGATATGTCATCAGGGAAGGGTCTCCTATCGAAAGTTGGGAGGAAGCCATCTGTGGTTGATGAGAACCGCCGTGCAACCTACAATATTTCCACTCAGCCAGTGGTCAGATCAGAATCAGTATTTACTACCTTTGACGGTGAAATCAAGCAATTTGTTGCAGTTGGGCTTCATGCAGAATATTCATATGCTAGGAGCCTTGCTCGTTTTTCTGGAGGTCTTGGATCCCTTGCTTGGAAAATTGCATCAAAGAGGATTGAACAAGCACTTCCTGATGGCTGTAAATTTGGCCGTGGTTGGGTTGGAGAATATGAGCCACTTCCAACCCCTGTATTACTGGTCGAAAATAGTACCCAAAATCAATCAGCTTTGGCTTCAAAGTTTTATTCATGCCCGGAATTGAGAAAGGATGACAGAACTCTTAGGACTTCAGTTCCTGCTAAGGAGCACCCTGTTACTAGGCCTGTTACAGAAGAGAGACAACACTCTGTTAGTGTGCCTACTTCAGGAGGGAGACCACCATTTCTTGATTCTCCTAGGGGGCTTTACTCAGAAGGGAAACCGACTGTGATCCGTCCTGTTGGAGCAAAACCTAATTCCACAGTCAATCCACAAAAAAACCTGCAATCCCGGTTTATCGAGCGTGAGAAAAAGGTTCAAAAGGAAGTTGAGTTGAACTCCATACCCTCGGTTCATCCACAGAAAAACCTGCAATCCCGGTTTATCGAGCATGAGAAGAAGGTGCAAGAAGCAGTTGAGTTGAACTCTATACCCTCAGTTCATCCACAGAAAAACCTGCAATCTCAGTTTATTGAGCCTGAAAAGAAGGTTCAAAAGGAAGTTGAGTTGAACTCCGTACCGTCAGTCAATCAAAATAATGCCAATCTTATTGCAGAAAAGCAATCATCAAGACGATCGGAGGCAGAAGCTTCCAGGCCCAGAGATACAGTATCAAGGAACATAAATCTTCCACAACCCGTACCTTGTAAGATGCCGGATTCTAATGGAACTGTTAACAGAGGGTTGCCTAATGGGAAATATGTGAGTGCGTGTCTGGACAACCGGATGATTAGTCCATCTGACAGTGATCATAGTCAAATGGATAGAACAGCAGCTTTCTTTCCTCGTAAACAGGTGCAGGGTCTTAGTGACCCAGTACAGTTAATGAAAAAGTTGGCGGAAAGTAATCAAAAGCAACAGAAATCGTCAAGTCAATCATCAATTGATACTCAACCCGTTGGGTCATCGGTTCCATCAATAAGAAGAGATGATTCAGGCAATGCTGCAGCAGCTGCTGCTCGGGCTTGGATGTCTATAGGCGCTGGAACATTTAATCAGCCTACGGAGATTCTCACTACACCCAAAAGTCAGATATCTGCAGATTCATTATACAACCCAGCTCGGGACTTTCAGTCACAAATTTCACGAGTTCGGGGCGAGTTTCCAATGCAATTTCAGAATCAGAACAGCTTTTCATTTCCAACCTTTTTACAACAACCTGTTCGTATGGCGAATGAATCACAGTTTCAAGGCCGACCTACAATTTTTCCTCAGTCGGCAGCAGCTGACTTGTCTAGATTTCAAGCGCAGTCACCTTGGCGAGGTCTCAGTCAACATGCTCAGCCAAGACCAAGACAGAAACAGGAAGGCCTTCCTCCTGACTTGAATATCGGTTTCCAGTCCCCAGGGTCTCCGGTGAAACAGTCCTCGAGTCTTCTGGTCGACTCTCAGCAGCCGGACCTGGCGTTGCAACTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042393 GO:0070577 GO:0140030 GO:0140033

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

948

Amino Acids

105.72

Weight (kDa)

7.9

Isoelectric Point (pI)

69.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55040 AT5G55040
fragaria_vesca	FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980 FvH4_3g22980
malus_domestica	MD03G1199100.v1.1 MD11G1215500.v1.1
prunus_persica	Prupe.4G215800_v2.0.a1
pyrus_communis	pycom03g15070 pycom11g19000
rosa_chinensis	RchiOBHm_Chr5g0040321
rosa_laevigata	RLG00000033971
rosa_multiflora	Rmu_sc0014485.1_g000009
rosa_roxburghii	Rroxscaffold_1G00040990
rosa_rugosa	Rorug05G0184600
rosa_samantha	Rh5AG271600 Rh5BG275500 Rh5CG307700 Rh5DG283700
rosa_wichuraiana	Rw5G025400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
Acc36I	ACCTGC	3 cut(s)	1716, 1803, 1890
AccB1I	GGYRCC	2 cut(s)	342, 944
AccI	GTMKAC	1 cut(s)	2808
AccII	CGCG	2 cut(s)	265, 278
AciI	CCGC	7 cut(s)	112, 291, 357, 451, 492, 1156, 2264
AclWI	GGATC	6 cut(s)	476, 578, 673, 1305, 1318, 1651
AcoI	YGGCCR	2 cut(s)	313, 1375
AcsI	RAATTY	3 cut(s)	794, 1370, 2505
AcuI	CTGAAG	4 cut(s)	356, 609, 1500, 1575
AcyI	GRCGYC	2 cut(s)	105, 343
AdeI	CACNNNGTG	1 cut(s)	1004
AfaI	GTAC	5 cut(s)	140, 1438, 1944, 2067, 2244
AfiI	CCNNNNNNNGG	8 cut(s)	280, 1001, 1046, 1320, 1384, 1592, 2488, 2687
AhdI	GACNNNNNGTC	1 cut(s)	2497
AjnI	CCWGG	4 cut(s)	466, 2018, 2770, 2826
Alw21I	GWGCWC	2 cut(s)	840, 1536
Alw26I	GTCTC	6 cut(s)	1012, 1115, 1558, 1594, 2696, 2781
AlwI	GGATC	6 cut(s)	476, 578, 673, 1305, 1318, 1651
AlwNI	CAGNNNCTG	4 cut(s)	1523, 2378, 2381, 2651
Ama87I	CYCGRG	3 cut(s)	2385, 2487, 2794
AoxI	GGCC	8 cut(s)	35, 313, 452, 1375, 1547, 2021, 2617, 2734
ApoI	RAATTY	3 cut(s)	794, 1370, 2505
Asp700I	GAANNNNTTC	2 cut(s)	594, 2736
AspA2I	CCTAGG	1 cut(s)	1622
AspLEI	GCGC	5 cut(s)	265, 280, 345, 2408, 2674
AspS9I	GGNCC	3 cut(s)	1037, 2022, 2824
AsuC2I	CCSGG	3 cut(s)	1481, 1717, 1804
AsuHPI	GGTGA	7 cut(s)	232, 241, 655, 707, 1238, 2670, 2794
AvaI	CYCGRG	3 cut(s)	2385, 2487, 2794
AvaII	GGWCC	2 cut(s)	1037, 2824
AvrII	CCTAGG	1 cut(s)	1622
AxyI	CCTNAGG	1 cut(s)	940
BamHI	GGATCC	1 cut(s)	1310
BanI	GGYRCC	2 cut(s)	342, 944
BanII	GRGCYC	1 cut(s)	840
BauI	CACGAG	1 cut(s)	2511
BbsI	GAAGAC	6 cut(s)	180, 189, 201, 399, 521, 2792
Bbv12I	GWGCWC	2 cut(s)	840, 1536
BccI	CCATC	5 cut(s)	46, 1144, 1355, 2170, 2347
BceAI	ACGGC	6 cut(s)	82, 328, 370, 460, 1143, 1362
BcgI	CGANNNNNNTGC	2 cut(s)	648, 682
BciT130I	CCWGG	4 cut(s)	468, 2020, 2772, 2828
BclI	TGATCA	1 cut(s)	2173
BcnI	CCSGG	3 cut(s)	1481, 1717, 1804
BcoDI	GTCTC	6 cut(s)	1012, 1115, 1558, 1594, 2696, 2781
BfaI	CTAG	5 cut(s)	1023, 1278, 1545, 1623, 2661
BfmI	CTRYAG	5 cut(s)	963, 1041, 2370, 2400, 2463
BfoI	RGCGCY	2 cut(s)	346, 2409
BfuAI	ACCTGC	3 cut(s)	1716, 1803, 1890
BglI	GCCNNNNNGGC	1 cut(s)	66
BglII	AGATCT	1 cut(s)	49
BlnI	CCTAGG	1 cut(s)	1622
BlpI	GCTNAGC	1 cut(s)	2706
Bme1390I	CCNGG	7 cut(s)	468, 1481, 1717, 1804, 2020, 2772, 2828
Bme18I	GGWCC	2 cut(s)	1037, 2824
BmeRI	GACNNNNNGTC	1 cut(s)	2497
BmeT110I	CYCGRG	3 cut(s)	2385, 2487, 2794
BmgT120I	GGNCC	3 cut(s)	1037, 2022, 2824
BmiI	GGNNCC	7 cut(s)	116, 344, 918, 946, 1283, 1312, 2337
BmrFI	CCNGG	7 cut(s)	468, 1481, 1717, 1804, 2020, 2772, 2828
BmrI	ACTGGG	1 cut(s)	2234
BmsI	GCATC	2 cut(s)	1340, 2067
BmuI	ACTGGG	1 cut(s)	2234
BpiI	GAAGAC	6 cut(s)	180, 189, 201, 399, 521, 2792
BplI	GAGNNNNNCTC	8 cut(s)	1273, 1305, 1748, 1780, 1835, 1867, 1922, 1954
BpmI	CTGGAG	2 cut(s)	450, 1320
Bpu10I	CCTNAGC	1 cut(s)	1527
Bpu1102I	GCTNAGC	1 cut(s)	2706
BpuMI	CCSGG	3 cut(s)	1481, 1717, 1804
BsaAI	YACGTR	1 cut(s)	163
BsaBI	GATNNNNATC	1 cut(s)	1201
BsaHI	GRCGYC	2 cut(s)	105, 343
BsaI	GGTCTC	5 cut(s)	1012, 1115, 1594, 2696, 2781
BsaJI	CCNNGG	8 cut(s)	639, 870, 1378, 1622, 1773, 2681, 2770, 2771
BsaWI	WCCGGW	2 cut(s)	2148, 2779
Bsc4I	CCNNNNNNNGG	8 cut(s)	280, 1001, 1046, 1320, 1384, 1592, 2488, 2687
Bse118I	RCCGGY	1 cut(s)	60
Bse1I	ACTGG	7 cut(s)	578, 684, 989, 1187, 1428, 2240, 2764
Bse21I	CCTNAGG	1 cut(s)	940
Bse3DI	GCAATG	2 cut(s)	729, 2371
Bse8I	GATNNNNATC	1 cut(s)	1201
BseBI	CCWGG	4 cut(s)	468, 2020, 2772, 2828
BseDI	CCNNGG	8 cut(s)	639, 870, 1378, 1622, 1773, 2681, 2770, 2771
BseGI	GGATG	6 cut(s)	307, 1501, 1780, 1867, 2157, 2400
BseJI	GATNNNNATC	1 cut(s)	1201
BseLI	CCNNNNNNNGG	8 cut(s)	280, 1001, 1046, 1320, 1384, 1592, 2488, 2687
BseMI	GCAATG	2 cut(s)	729, 2371
BseMII	CTCAG	9 cut(s)	954, 1196, 1650, 1875, 1904, 2651, 2707, 2720, 2828
BseNI	ACTGG	7 cut(s)	578, 684, 989, 1187, 1428, 2240, 2764
BseRI	GAGGAG	6 cut(s)	31, 217, 220, 311, 320, 928
BseYI	CCCAGC	1 cut(s)	2482
BsgI	GTGCAG	2 cut(s)	869, 2243
Bsh1236I	CGCG	2 cut(s)	265, 278
Bsh1285I	CGRYCG	1 cut(s)	2003
BshFI	GGCC	8 cut(s)	37, 315, 454, 1377, 1549, 2023, 2619, 2736
BshNI	GGYRCC	2 cut(s)	342, 944
BsiEI	CGRYCG	1 cut(s)	2003
BsiHKAI	GWGCWC	2 cut(s)	840, 1536
BsiHKCI	CYCGRG	3 cut(s)	2385, 2487, 2794
BslFI	GGGAC	2 cut(s)	2504, 2752
BslI	CCNNNNNNNGG	8 cut(s)	280, 1001, 1046, 1320, 1384, 1592, 2488, 2687
BsmAI	GTCTC	6 cut(s)	1012, 1115, 1558, 1594, 2696, 2781
BsmFI	GGGAC	2 cut(s)	2504, 2752
BsnI	GGCC	8 cut(s)	37, 315, 454, 1377, 1549, 2023, 2619, 2736
Bso31I	GGTCTC	5 cut(s)	1012, 1115, 1594, 2696, 2781
BsoBI	CYCGRG	3 cut(s)	2385, 2487, 2794
Bsp1286I	GDGCHC	2 cut(s)	840, 1536
Bsp1720I	GCTNAGC	1 cut(s)	2706
BspACI	CCGC	7 cut(s)	112, 291, 357, 451, 492, 1156, 2264
BspANI	GGCC	8 cut(s)	37, 315, 454, 1377, 1549, 2023, 2619, 2736
BspCNI	CTCAG	9 cut(s)	953, 1195, 1649, 1874, 1903, 2650, 2706, 2719, 2827
BspFNI	CGCG	2 cut(s)	265, 278
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	7 cut(s)	116, 344, 918, 946, 1283, 1312, 2337
BspMAI	CTGCAG	2 cut(s)	2374, 2467
BspMI	ACCTGC	3 cut(s)	1716, 1803, 1890
BspPI	GGATC	6 cut(s)	476, 578, 673, 1305, 1318, 1651
BspQI	GCTCTTC	1 cut(s)	585
BspT107I	GGYRCC	2 cut(s)	342, 944
BspTNI	GGTCTC	5 cut(s)	1012, 1115, 1594, 2696, 2781
BsrDI	GCAATG	2 cut(s)	729, 2371
BsrFI	RCCGGY	1 cut(s)	60
BsrI	ACTGG	7 cut(s)	578, 684, 989, 1187, 1428, 2240, 2764
BssAI	RCCGGY	1 cut(s)	60
BssECI	CCNNGG	8 cut(s)	639, 870, 1378, 1622, 1773, 2681, 2770, 2771
BssNI	GRCGYC	2 cut(s)	105, 343
BssSI	CACGAG	1 cut(s)	2511
BssT1I	CCWWGG	3 cut(s)	870, 1622, 2681
Bst2BI	CACGAG	1 cut(s)	2511
Bst2UI	CCWGG	4 cut(s)	468, 2020, 2772, 2828
Bst6I	CTCTTC	4 cut(s)	332, 585, 1554, 2344
BstACI	GRCGYC	2 cut(s)	105, 343
BstAPI	GCANNNNNTGC	2 cut(s)	2378, 2381
BstBAI	YACGTR	1 cut(s)	163
BstC8I	GCNNGC	3 cut(s)	58, 62, 783
BstDSI	CCRYGG	2 cut(s)	639, 1378
BstENI	CCTNNNNNAGG	2 cut(s)	1590, 2685
BstF5I	GGATG	6 cut(s)	307, 1501, 1780, 1867, 2157, 2400
BstFNI	CGCG	2 cut(s)	265, 278
BstH2I	RGCGCY	2 cut(s)	346, 2409
BstHHI	GCGC	5 cut(s)	265, 280, 345, 2408, 2674
BstMAI	GTCTC	6 cut(s)	1012, 1115, 1558, 1594, 2696, 2781
BstMCI	CGRYCG	1 cut(s)	2003
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 66, 340, 953, 2375, 2378, 2381, 2387
BstNI	CCWGG	4 cut(s)	468, 2020, 2772, 2828
BstNSI	RCATGY	2 cut(s)	768, 2705
BstSCI	CCNGG	7 cut(s)	466, 1479, 1715, 1802, 2018, 2770, 2826
BstSFI	CTRYAG	5 cut(s)	963, 1041, 2370, 2400, 2463
BstUI	CGCG	2 cut(s)	265, 278
BstV2I	GAAGAC	6 cut(s)	180, 189, 201, 399, 521, 2792
BstX2I	RGATCY	2 cut(s)	49, 1310
BstXI	CCANNNNNNTGG	1 cut(s)	871
BstYI	RGATCY	2 cut(s)	49, 1310
Bsu36I	CCTNAGG	1 cut(s)	940
BsuRI	GGCC	8 cut(s)	37, 315, 454, 1377, 1549, 2023, 2619, 2736
BtgI	CCRYGG	2 cut(s)	639, 1378
BtgZI	GCGATG	1 cut(s)	375
BtsCI	GGATG	6 cut(s)	307, 1501, 1780, 1867, 2157, 2400
BtsIMutI	CAGTG	3 cut(s)	677, 1194, 2176
BveI	ACCTGC	3 cut(s)	1716, 1803, 1890
Cac8I	GCNNGC	3 cut(s)	58, 62, 783
CaiI	CAGNNNCTG	4 cut(s)	1523, 2378, 2381, 2651
CciI	TCATGA	1 cut(s)	607
CfoI	GCGC	5 cut(s)	265, 280, 345, 2408, 2674
Cfr10I	RCCGGY	1 cut(s)	60
Cfr13I	GGNCC	3 cut(s)	1037, 2022, 2824
CseI	GACGC	1 cut(s)	611
Csp6I	GTAC	5 cut(s)	139, 1437, 1943, 2066, 2243
CviAII	CATG	7 cut(s)	488, 608, 765, 1259, 1476, 1817, 2702
CviQI	GTAC	5 cut(s)	139, 1437, 1943, 2066, 2243
DinI	GGCGCC	1 cut(s)	344
DraIII	CACNNNGTG	1 cut(s)	1004
DriI	GACNNNNNGTC	1 cut(s)	2497
EaeI	YGGCCR	2 cut(s)	313, 1375
Eam1104I	CTCTTC	4 cut(s)	332, 585, 1554, 2344
Eam1105I	GACNNNNNGTC	1 cut(s)	2497
EarI	CTCTTC	4 cut(s)	332, 585, 1554, 2344
EciI	GGCGGA	2 cut(s)	127, 2279
Ecl136II	GAGCTC	1 cut(s)	838
Eco130I	CCWWGG	3 cut(s)	870, 1622, 2681
Eco147I	AGGCCT	2 cut(s)	1549, 2736
Eco24I	GRGCYC	1 cut(s)	840
Eco31I	GGTCTC	5 cut(s)	1012, 1115, 1594, 2696, 2781
Eco32I	GATATC	1 cut(s)	2460
Eco47I	GGWCC	2 cut(s)	1037, 2824
Eco53kI	GAGCTC	1 cut(s)	838
Eco57I	CTGAAG	4 cut(s)	356, 609, 1500, 1575
Eco81I	CCTNAGG	1 cut(s)	940
Eco88I	CYCGRG	3 cut(s)	2385, 2487, 2794
EcoICRI	GAGCTC	1 cut(s)	838
EcoNI	CCTNNNNNAGG	2 cut(s)	1590, 2685
EcoRII	CCWGG	4 cut(s)	466, 2018, 2770, 2826
EcoRV	GATATC	1 cut(s)	2460
EcoT14I	CCWWGG	3 cut(s)	870, 1622, 2681
EcoT38I	GRGCYC	1 cut(s)	840
EgeI	GGCGCC	1 cut(s)	344
EheI	GGCGCC	1 cut(s)	344
ErhI	CCWWGG	3 cut(s)	870, 1622, 2681
FaeI	CATG	7 cut(s)	491, 611, 768, 1262, 1479, 1820, 2705
FaqI	GGGAC	2 cut(s)	2504, 2752
FatI	CATG	7 cut(s)	487, 607, 764, 1258, 1475, 1816, 2701
FauNDI	CATATG	1 cut(s)	1273
FbaI	TGATCA	1 cut(s)	2173
FblI	GTMKAC	1 cut(s)	2808
FokI	GGATG	6 cut(s)	314, 1508, 1767, 1854, 2164, 2407
FriOI	GRGCYC	1 cut(s)	840
FspBI	CTAG	5 cut(s)	1023, 1278, 1545, 1623, 2661
GlaI	GCGC	5 cut(s)	264, 279, 344, 2407, 2673
GsaI	CCCAGC	1 cut(s)	2486
GsuI	CTGGAG	2 cut(s)	450, 1320
HaeII	RGCGCY	2 cut(s)	346, 2409
HaeIII	GGCC	8 cut(s)	37, 315, 454, 1377, 1549, 2023, 2619, 2736
HgaI	GACGC	1 cut(s)	611
HhaI	GCGC	5 cut(s)	265, 280, 345, 2408, 2674
Hin1I	GRCGYC	2 cut(s)	105, 343
Hin1II	CATG	7 cut(s)	491, 611, 768, 1262, 1479, 1820, 2705
Hin6I	GCGC	5 cut(s)	263, 278, 343, 2406, 2672
HinP1I	GCGC	5 cut(s)	263, 278, 343, 2406, 2672
HincII	GTYRAC	3 cut(s)	2101, 2699, 2809
HindII	GTYRAC	3 cut(s)	2101, 2699, 2809
HindIII	AAGCTT	1 cut(s)	2013
HpaI	GTTAAC	1 cut(s)	2101
HphI	GGTGA	7 cut(s)	232, 241, 655, 707, 1238, 2670, 2794
Hpy166II	GTNNAC	5 cut(s)	166, 2101, 2216, 2699, 2809
Hpy8I	GTNNAC	5 cut(s)	166, 2101, 2216, 2699, 2809
Hpy99I	CGWCG	3 cut(s)	126, 158, 401
HpyCH4IV	ACGT	3 cut(s)	105, 162, 518
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 66, 340, 953, 2375, 2378, 2381, 2387
HpySE526I	ACGT	3 cut(s)	105, 162, 518
Hsp92I	GRCGYC	2 cut(s)	105, 343
Hsp92II	CATG	7 cut(s)	491, 611, 768, 1262, 1479, 1820, 2705
HspAI	GCGC	5 cut(s)	263, 278, 343, 2406, 2672
KasI	GGCGCC	1 cut(s)	342
KroI	GCCGGC	1 cut(s)	60
KroNI	GCCGGC	1 cut(s)	62
Ksp22I	TGATCA	1 cut(s)	2173
KspAI	GTTAAC	1 cut(s)	2101
LguI	GCTCTTC	1 cut(s)	585
LmnI	GCTCC	5 cut(s)	114, 835, 1281, 1531, 1670
LweI	GCATC	2 cut(s)	1340, 2067
MaeI	CTAG	5 cut(s)	1023, 1278, 1545, 1623, 2661
MaeII	ACGT	3 cut(s)	105, 162, 518
MaeIII	GTNAC	7 cut(s)	266, 812, 1540, 1552, 2234, 2499, 2676
MfeI	CAATTG	1 cut(s)	2307
MflI	RGATCY	2 cut(s)	49, 1310
MhlI	GDGCHC	2 cut(s)	840, 1536
Mly113I	GGCGCC	1 cut(s)	343
MlyI	GAGTC	5 cut(s)	263, 293, 437, 2804, 2806
MmeI	TCCRAC	8 cut(s)	145, 413, 501, 1019, 1369, 1433, 1648, 2591
MroNI	GCCGGC	1 cut(s)	60
MroXI	GAANNNNTTC	2 cut(s)	594, 2736
MseI	TTAA	5 cut(s)	351, 707, 2100, 2249, 2418
MspA1I	CMGCKG	3 cut(s)	334, 2378, 2651
MspR9I	CCNGG	7 cut(s)	468, 1481, 1717, 1804, 2020, 2772, 2828
MunI	CAATTG	1 cut(s)	2307
MvaI	CCWGG	4 cut(s)	468, 2020, 2772, 2828
MvnI	CGCG	2 cut(s)	265, 278
MwoI	GCNNNNNNNGC	8 cut(s)	53, 66, 340, 953, 2375, 2378, 2381, 2387
NaeI	GCCGGC	1 cut(s)	62
NarI	GGCGCC	1 cut(s)	343
NciI	CCSGG	3 cut(s)	1481, 1717, 1804
NdeI	CATATG	1 cut(s)	1273
NgoMIV	GCCGGC	1 cut(s)	60
NlaIII	CATG	7 cut(s)	491, 611, 768, 1262, 1479, 1820, 2705
NlaIV	GGNNCC	7 cut(s)	116, 344, 918, 946, 1283, 1312, 2337
NmeAIII	GCCGAG	1 cut(s)	239
NmuCI	GTSAC	5 cut(s)	266, 812, 2234, 2499, 2676
NspI	RCATGY	2 cut(s)	768, 2705
PaeR7I	CTCGAG	1 cut(s)	2794
PagI	TCATGA	1 cut(s)	607
PasI	CCCWGGG	1 cut(s)	2771
PceI	AGGCCT	2 cut(s)	1549, 2736
PciSI	GCTCTTC	1 cut(s)	585
PcsI	WCGNNNNNNNCGW	4 cut(s)	153, 159, 174, 183
PdiI	GCCGGC	1 cut(s)	62
PdmI	GAANNNNTTC	2 cut(s)	594, 2736
PfoI	TCCNGGA	1 cut(s)	466
Ple19I	CGATCG	1 cut(s)	2003
PleI	GAGTC	5 cut(s)	263, 292, 437, 2804, 2805
PluTI	GGCGCC	1 cut(s)	346
PpsI	GAGTC	5 cut(s)	263, 292, 437, 2804, 2805
Ppu21I	YACGTR	1 cut(s)	163
Psp124BI	GAGCTC	1 cut(s)	840
Psp6I	CCWGG	4 cut(s)	466, 2018, 2770, 2826
PspFI	CCCAGC	1 cut(s)	2482
PspGI	CCWGG	4 cut(s)	466, 2018, 2770, 2826
PspN4I	GGNNCC	7 cut(s)	116, 344, 918, 946, 1283, 1312, 2337
PspPI	GGNCC	3 cut(s)	1037, 2022, 2824
PspXI	VCTCGAGB	1 cut(s)	2794
PstI	CTGCAG	2 cut(s)	2374, 2467
PstNI	CAGNNNCTG	4 cut(s)	1523, 2378, 2381, 2651
PsuI	RGATCY	2 cut(s)	49, 1310
PvuI	CGATCG	1 cut(s)	2003
PvuII	CAGCTG	3 cut(s)	334, 2378, 2651
RsaI	GTAC	5 cut(s)	140, 1438, 1944, 2067, 2244
RsaNI	GTAC	5 cut(s)	139, 1437, 1943, 2066, 2243
SacI	GAGCTC	1 cut(s)	840
SalI	GTCGAC	1 cut(s)	2807
SapI	GCTCTTC	1 cut(s)	585
SaqAI	TTAA	5 cut(s)	351, 707, 2100, 2249, 2418
Sau96I	GGNCC	3 cut(s)	1037, 2022, 2824
SchI	GAGTC	5 cut(s)	263, 293, 437, 2804, 2806
ScrFI	CCNGG	7 cut(s)	468, 1481, 1717, 1804, 2020, 2772, 2828
SduI	GDGCHC	2 cut(s)	840, 1536
SfaNI	GCATC	2 cut(s)	1340, 2067
SfcI	CTRYAG	5 cut(s)	963, 1041, 2370, 2400, 2463
SfoI	GGCGCC	1 cut(s)	344
Sfr274I	CTCGAG	1 cut(s)	2794
SinI	GGWCC	2 cut(s)	1037, 2824
SlaI	CTCGAG	1 cut(s)	2794
SmlI	CTYRAG	1 cut(s)	2794
SmoI	CTYRAG	1 cut(s)	2794
SseBI	AGGCCT	2 cut(s)	1549, 2736
SsiI	CCGC	7 cut(s)	112, 291, 357, 451, 492, 1156, 2264
SspDI	GGCGCC	1 cut(s)	342
SspI	AATATT	2 cut(s)	1174, 1268
SspMI	CTAG	5 cut(s)	1023, 1278, 1545, 1623, 2661
SstI	GAGCTC	1 cut(s)	840
StuI	AGGCCT	2 cut(s)	1549, 2736
StyD4I	CCNGG	7 cut(s)	466, 1479, 1715, 1802, 2018, 2770, 2826
StyI	CCWWGG	3 cut(s)	870, 1622, 2681
TaiI	ACGT	3 cut(s)	108, 165, 521
TatI	WGTACW	2 cut(s)	138, 2242
TauI	GCSGC	4 cut(s)	294, 360, 454, 494
Tru1I	TTAA	5 cut(s)	351, 707, 2100, 2249, 2418
Tru9I	TTAA	5 cut(s)	351, 707, 2100, 2249, 2418
TscAI	CASTG	3 cut(s)	684, 1194, 2176
TseFI	GTSAC	5 cut(s)	266, 812, 2234, 2499, 2676
Tsp45I	GTSAC	5 cut(s)	266, 812, 2234, 2499, 2676
TspGWI	ACGGA	7 cut(s)	139, 399, 489, 1050, 1649, 1930, 2444
TspRI	CASTG	3 cut(s)	684, 1194, 2176
VpaK11BI	GGWCC	2 cut(s)	1037, 2824
XagI	CCTNNNNNAGG	2 cut(s)	1590, 2685
XapI	RAATTY	3 cut(s)	794, 1370, 2505
XbaI	TCTAGA	1 cut(s)	2660
XceI	RCATGY	2 cut(s)	768, 2705
XcmI	CCANNNNNNNNNTGG	2 cut(s)	251, 1186
XhoI	CTCGAG	1 cut(s)	2794
XmaJI	CCTAGG	1 cut(s)	1622
XmiI	GTMKAC	1 cut(s)	2808
XmnI	GAANNNNTTC	2 cut(s)	594, 2736
XspI	CTAG	5 cut(s)	1023, 1278, 1545, 1623, 2661
ZraI	GACGTC	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.