pycom03g21200

cyclin-P3-1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
21507848 .. 21508238
391 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g21200.2

Sequence Viewer

Length: 288 bp
ATGCTAGCAGCGAAATTTATGGATGACGCATTCTTCAACAATGCATACTATGCAAAAGTGGGAGGAGTGAGCACAACAGAGTTGAATAGGTTGGAAATCAAGTTCTTGTTTACCATAGATTTCAGACTCCAAGTTACTATAGAGACATTCAATAAGTATTGCTCTCAACTGGATAAAGAAGCTGCAGAAGTCCAGATCGAACGCTCGATCCAAGCTTGCAGGATCAAAGAGAATTGGTCGAAGTCAAAAAAGAAAGATTCAACTTACGTTCACACAGTTGCGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

11.05

Weight (kDa)

8.93

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 202, 230
AcsI RAATTY 1 cut(s) 14
AgsI TTSAA 4 cut(s) 37, 85, 151, 261
AloI GAACNNNNNNTCC 4 cut(s) 86, 118, 192, 224
AluBI AGCT 2 cut(s) 182, 215
AluI AGCT 2 cut(s) 182, 215
Alw21I GWGCWC 1 cut(s) 74
Alw26I GTCTC 1 cut(s) 137
AlwI GGATC 2 cut(s) 202, 230
ApeKI GCWGC 2 cut(s) 8, 182
ApoI RAATTY 1 cut(s) 14
AsuNHI GCTAGC 1 cut(s) 4
Bbv12I GWGCWC 1 cut(s) 74
BbvI GCAGC 2 cut(s) 20, 169
BcoDI GTCTC 1 cut(s) 137
BfaI CTAG 1 cut(s) 5
BfmI CTRYAG 2 cut(s) 138, 183
BisI GCNGC 2 cut(s) 9, 183
BlsI GCNGC 2 cut(s) 10, 184
BmtI GCTAGC 1 cut(s) 8
Bse1I ACTGG 1 cut(s) 174
BseGI GGATG 1 cut(s) 28
BseNI ACTGG 1 cut(s) 174
BseRI GAGGAG 1 cut(s) 78
BseXI GCAGC 2 cut(s) 20, 169
BsiHKAI GWGCWC 1 cut(s) 74
BsmAI GTCTC 1 cut(s) 137
BsmI GAATGC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 74
Bsp143I GATC 3 cut(s) 195, 207, 222
BspMAI CTGCAG 1 cut(s) 187
BspOI GCTAGC 1 cut(s) 8
BspPI GGATC 2 cut(s) 202, 230
BsrI ACTGG 1 cut(s) 174
BssMI GATC 3 cut(s) 195, 207, 222
Bst4CI ACNGT 1 cut(s) 277
BstAPI GCANNNNNTGC 1 cut(s) 50
BstC8I GCNNGC 2 cut(s) 6, 217
BstF5I GGATG 1 cut(s) 28
BstKTI GATC 3 cut(s) 198, 210, 225
BstMAI GTCTC 1 cut(s) 137
BstMBI GATC 3 cut(s) 195, 207, 222
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstSFI CTRYAG 2 cut(s) 138, 183
BstV1I GCAGC 2 cut(s) 20, 169
BtsCI GGATG 1 cut(s) 28
Cac8I GCNNGC 2 cut(s) 6, 217
CseI GACGC 1 cut(s) 35
CviJI RGCY 2 cut(s) 182, 215
CviKI_1 RGCY 2 cut(s) 182, 215
DpnI GATC 3 cut(s) 197, 209, 224
DpnII GATC 3 cut(s) 195, 207, 222
EcoT22I ATGCAT 1 cut(s) 46
FaiI YATR 5 cut(s) 20, 46, 51, 116, 140
Fnu4HI GCNGC 2 cut(s) 9, 183
FokI GGATG 1 cut(s) 35
Fsp4HI GCNGC 2 cut(s) 9, 183
FspBI CTAG 1 cut(s) 5
GluI GCNGC 2 cut(s) 9, 183
HgaI GACGC 1 cut(s) 35
HindIII AAGCTT 1 cut(s) 213
HinfI GANTC 2 cut(s) 126, 257
Hpy166II GTNNAC 2 cut(s) 111, 271
Hpy188I TCNGA 1 cut(s) 125
Hpy188III TCNNGA 1 cut(s) 193
Hpy8I GTNNAC 2 cut(s) 111, 271
HpyCH4III ACNGT 1 cut(s) 277
HpyCH4IV ACGT 1 cut(s) 267
HpyCH4V TGCA 4 cut(s) 44, 53, 185, 219
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpySE526I ACGT 1 cut(s) 267
Kzo9I GATC 3 cut(s) 195, 207, 222
LpnPI CCDG 3 cut(s) 155, 205, 206
Lsp1109I GCAGC 2 cut(s) 20, 169
MaeI CTAG 1 cut(s) 5
MaeII ACGT 1 cut(s) 267
MaeIII GTNAC 1 cut(s) 133
MalI GATC 3 cut(s) 197, 209, 224
MboI GATC 3 cut(s) 195, 207, 222
MboII GAAGA 1 cut(s) 25
MhlI GDGCHC 1 cut(s) 74
MluCI AATT 2 cut(s) 14, 232
MlyI GAGTC 1 cut(s) 120
MmeI TCCRAC 1 cut(s) 72
MnlI CCTC 1 cut(s) 56
Mph1103I ATGCAT 1 cut(s) 46
Mva1269I GAATGC 1 cut(s) 29
MwoI GCNNNNNNNGC 1 cut(s) 50
NdeII GATC 3 cut(s) 195, 207, 222
NheI GCTAGC 1 cut(s) 4
NsiI ATGCAT 1 cut(s) 46
PctI GAATGC 1 cut(s) 29
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 2 cut(s) 10, 184
PleI GAGTC 1 cut(s) 120
PpsI GAGTC 1 cut(s) 120
PstI CTGCAG 1 cut(s) 187
SatI GCNGC 2 cut(s) 9, 183
Sau3AI GATC 3 cut(s) 195, 207, 222
SchI GAGTC 1 cut(s) 120
SduI GDGCHC 1 cut(s) 74
SetI ASST 4 cut(s) 92, 184, 217, 270
SfcI CTRYAG 2 cut(s) 138, 183
Sse9I AATT 2 cut(s) 14, 232
SspMI CTAG 1 cut(s) 5
TaaI ACNGT 1 cut(s) 277
TaiI ACGT 1 cut(s) 270
TaqI TCGA 3 cut(s) 198, 206, 239
TasI AATT 2 cut(s) 14, 232
TfiI GAWTC 1 cut(s) 257
TseI GCWGC 2 cut(s) 8, 182
XapI RAATTY 1 cut(s) 14
XspI CTAG 1 cut(s) 5
Zsp2I ATGCAT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.