pycom04g02300

WD repeat-containing protein C2A9.03-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0003717
Physical Location & Seq
Forward (+)
2051444 .. 2057953
6510 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2727 bp
ATGAAAGTATATGCAAATTTTATTAATATTTTGTTAGAATTTGTAGTTGGGTTTCCCATAAATTTGTTTTCTTTGGCGGTATGTATGTTTTTTTTAGATTTTTATAGATGTCAGAGAAACTGTAGACTTTCAATAACATGTATAGATTCTTCTATCTGTTATGTTGCCATATCTATATGTTCTTGTTTGTTCATTTCATGGGAATTGGGTCTTGCTTTTCGGTTTTTTATATCGGTACATATGTTTATTGTACTGGATTATATGGCGGATGAAGGGGACATGTCTGATTTTGTCAAGGATGTGGAGGAAGAAAATCCAGGTGGAGATATGGGTCTTGATGAATATGACATGCTTACCGAAGTGTCAGATACGTCGTCTGCACAAGCGAGAAAGGGAAGGGACATTCAAGGTATTCCATGGGACAAATTGAGCATAACAAGGGGAAAATACAGATTGACGAGGCTAGAACAGTACAAGAATTATGAGAACATCCCTTTATCTGGGGAAACTGTGGACAAGGAGTGCATACAAATGCAGAAAGGTGGAAACTACTATGACTTCTTCCATAATACAAGACTGGTTAAACCTACAATCCTTCATTTCCAGCTGAGAAATTTGGTTTGGGCCTCTTCAAAGCATGATGTCTACCTCATGTCCAACTTTTCAGTCATGCATTGGTCATCTCTATCTGGGAATTTGTCTGAGGTTCTCAATTTTGCAGGACATGTTGCCCCAACAGAGAAACATGCAGGAAGTTTATTGGAGGGTTTTATGCAGACTCAGATAAGCACACTGGCAGTCAAGGACAATTTTCTTGTTGCGGGTGGCTTTCAAGGAGAGCTTACTTGTAAATCTCTTGATAAACAAGGAGTAAGTTTCTGTACCCGGACCACACATGATGACAATGCCATTACAAATGCTGTTGAAATATACGATAGATTGGGGGGTGGAATGCATTTCATGGCATCCAATAATGACTGCGGCATAAGAGAATATGACATGGAGAAGTTTCAGCTTTTGAATCACTTTCGTTTCCCTTGGCCAGTGAATCATACATCAATAAGCCCAGATCGTAGGCTTGTTGCGGTTGTTGGTGATCATGTAGATGCATTGCTCATGGATTCGCAGAATGGGAAGACTATTGCTAAGGTCGTTGGTCATCTGGATTACTCTTTTGCGTCAGCATGGCATCCTGATGGTCGCATATTTGCCACCGGAAACCAGGACAAGACTTCCCGAGTCTGGGACATAAGAAATCTTTCATTGCCAGTTGCCGTTCTGAAGAATAACTTGGGTGCTGCTAGGTCAATTCGCTTTTCATCAGATGGTCAGTTCATGGTGGTGGCGGAACCTGCAGATTTTGTGCATATATATAGCACAAAGGCAGATTACAACGTGCGGCAAGAGATTGATTTCTTTGGGGAGATATCCGGTGTATCAATGAGTCCCGATGACGAGTCTTTGTATATAGGAATCTGTGACCGAACATATGCCAGCTTGCTACAGTATAACAGAAGGGTGGAAACCCTCGTGTGGATAGTGAGCCAGATGGGTGTAAAGATTGTGAGTGTGAAATATGGAGTTGTCTTTGCCTTTCTCGTTGCAAAGGGATTTACCCATCACTTCTCTCAGATCCAGCTTCCTCCCTCGGAATCCTCCTTAAAATATCCCTTTTTCAGTTTCTTGCTTGTCTCTCAAAACTGTCCGCAGTCCTTCACTAGACAAGCATGTTGTGAAGCAAAACAAGATACGGTTTGTCCAAAAGCTACAAACACTGCTTCTTTCCAAACCGAAATGCTATATTCCAATTCATATTCTCAACAAGTGTCGAGCCTACCTTTCCCTATCGAAGCCACGATCCATTCCCTCACTCCCTTGCCATCCAATGCAACTAAATCATTATCACAACTCTGTGTCCGTCTAATAACCCCAGCTGCAAAGCCTTTATCATCTCCAGAAGTTCAGTCATGTGAGCTAATAGTAGACCGACCTTTGAAACTCAAGCAGTTGACGCTCCGAAAGGGTCTAAAGTTGAAGAGGCATCACCAAGATTTTTTGCTCAAATTCAAAGAAATTCCGGATAGTCGATTGAGGCAGAGGAGAGCTTGTTTGGTGGTGAGAGAAGTGCTTGGGTTGACGGTTGAAAAGAGAACTTTGATAGACCACTTGACTCATTTTAGGAATGATTTTGTGCTGTCCAACAAGTTGAGAGGGATGATCATACGGCACCCGGAGTTATTCTATGTGAGCTTGAAAGGGCAGAGAGATTCAGTGTTTTTAGTGGAGGGTTTTGATGACAAGGGTGCACTGTTGGAGAAGAAAGAGACTTTGGTGATAAAGGAAAAGTTGATGCAAAAGCTAGGATTAACAACACTGAGATTGGTGGCTCTACTGATGACTTTGAGTCCGATGATGACGACGACGACGACGACTATGATGATGGTTTTCAGAGTTTGTTTGAGCCTGAAGATTTTTATGCGGATGATGATGGTGATAAGAAGGGTGAGACAATTGACTACAGGGAGAAGGGGCAGTTTTGGACTGTTGATGCTCATTCTGTTCATGATGGCAGGAAGCAACAAATGGAACCTTGGTAGAAGAGAATGTCAATTTGATATGAATGACTGTAAAAATGAAGTCTCACGGTCTGTATCTATATATATGAAGCAAATGGCCCTTCACCTGAAGGGTAATTTTTCTGAAATACCTTACATTATCCTGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

909

Amino Acids

103.26

Weight (kDa)

8.65

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_THOC3 PF25174 317 - 488 6.1e-18 THOC3 beta-propeller domain
WD40_Prp19 PF24814 320 - 534 5.7e-15 Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 320 - 458 6.4e-11 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR5 PF25175 321 - 495 4.6e-12 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 348 - 495 7.3e-07 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 395 - 495 2.3e-07 Echinoderm microtubule-associated protein second beta-propeller
PORR PF11955 692 - 785 1.3e-27 Plant organelle RNA recognition domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1360
AccB1I GGYRCC 1 cut(s) 2226
AccI GTMKAC 3 cut(s) 124, 645, 1983
AccIII TCCGGA 1 cut(s) 2077
AciI CCGC 9 cut(s) 77, 266, 821, 981, 1085, 1346, 1399, 1706, 2479
AclWI GGATC 2 cut(s) 1627, 1852
AcoI YGGCCR 1 cut(s) 1040
AcsI RAATTY 7 cut(s) 16, 38, 61, 613, 694, 2063, 2073
AcuI CTGAAG 3 cut(s) 1301, 2486, 2705
AfaI GTAC 4 cut(s) 237, 252, 473, 883
AfiI CCNNNNNNNGG 4 cut(s) 500, 1242, 1243, 1533
AflIII ACRYGT 3 cut(s) 137, 279, 724
AhdI GACNNNNNGTC 1 cut(s) 2403
AjnI CCWGG 2 cut(s) 316, 1221
AjuI GAANNNNNNNTTGG 8 cut(s) 30, 62, 604, 636, 1274, 1306, 2312, 2344
Alw21I GWGCWC 1 cut(s) 2308
Alw26I GTCTC 4 cut(s) 1696, 2318, 2500, 2644
Alw44I GTGCAC 1 cut(s) 2304
AlwI GGATC 2 cut(s) 1627, 1852
Ama87I CYCGRG 1 cut(s) 1236
Aor13HI TCCGGA 1 cut(s) 2077
AoxI GGCC 3 cut(s) 624, 1040, 2673
ApaLI GTGCAC 1 cut(s) 2304
ApeKI GCWGC 2 cut(s) 1298, 1934
ApoI RAATTY 7 cut(s) 16, 38, 61, 613, 694, 2063, 2073
AseI ATTAAT 1 cut(s) 24
Asp700I GAANNNNTTC 1 cut(s) 1258
AspS9I GGNCC 3 cut(s) 624, 888, 2674
AsuC2I CCSGG 2 cut(s) 886, 2231
AsuHPI GGTGA 7 cut(s) 1106, 2036, 2128, 2344, 2503, 2515, 2672
AvaI CYCGRG 1 cut(s) 1236
AvaII GGWCC 1 cut(s) 888
BaeGI GKGCMC 1 cut(s) 2308
BaeI ACNNNNGTAYC 2 cut(s) 227, 260
BalI TGGCCA 1 cut(s) 1042
BanI GGYRCC 1 cut(s) 2226
BarI GAAGNNNNNNTAC 2 cut(s) 133, 165
BauI CACGAG 1 cut(s) 1529
BbsI GAAGAC 1 cut(s) 1142
Bbv12I GWGCWC 1 cut(s) 2308
BbvI GCAGC 2 cut(s) 1285, 1921
BccI CCATC 8 cut(s) 1190, 1319, 1543, 1626, 1888, 2434, 2482, 2560
BceAI ACGGC 2 cut(s) 1259, 2240
BciT130I CCWGG 2 cut(s) 318, 1223
BclI TGATCA 2 cut(s) 1096, 2217
BcnI CCSGG 2 cut(s) 886, 2231
BcoDI GTCTC 4 cut(s) 1696, 2318, 2500, 2644
BfaI CTAG 4 cut(s) 464, 1302, 1719, 2360
BfmI CTRYAG 4 cut(s) 121, 1353, 1502, 2517
BfuAI ACCTGC 1 cut(s) 1360
BisI GCNGC 4 cut(s) 982, 1299, 1400, 1935
BlsI GCNGC 4 cut(s) 983, 1300, 1401, 1936
Bme1390I CCNGG 4 cut(s) 318, 886, 1223, 2231
Bme18I GGWCC 1 cut(s) 888
BmeRI GACNNNNNGTC 1 cut(s) 2403
BmeT110I CYCGRG 1 cut(s) 1236
BmgT120I GGNCC 3 cut(s) 624, 888, 2674
BmiI GGNNCC 3 cut(s) 1350, 2228, 2588
BmrFI CCNGG 4 cut(s) 318, 886, 1223, 2231
BmsI GCATC 6 cut(s) 974, 1096, 1198, 2050, 2340, 2538
BpiI GAAGAC 1 cut(s) 1142
BpmI CTGGAG 1 cut(s) 1938
Bpu10I CCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 1 cut(s) 1985
BpuMI CCSGG 2 cut(s) 886, 2231
BsaJI CCNNGG 4 cut(s) 416, 1037, 1647, 2590
BsaWI WCCGGW 3 cut(s) 1214, 1430, 2077
BsaXI ACNNNNNCTCC 2 cut(s) 2092, 2122
Bsc4I CCNNNNNNNGG 4 cut(s) 500, 1242, 1243, 1533
Bse1I ACTGG 5 cut(s) 258, 582, 798, 1043, 1268
Bse3DI GCAATG 2 cut(s) 1109, 1262
BseAI TCCGGA 1 cut(s) 2077
BseBI CCWGG 2 cut(s) 318, 1223
BseDI CCNNGG 4 cut(s) 416, 1037, 1647, 2590
BseGI GGATG 8 cut(s) 274, 304, 489, 965, 1189, 1880, 2220, 2487
BseLI CCNNNNNNNGG 4 cut(s) 500, 1242, 1243, 1533
BseMI GCAATG 2 cut(s) 1109, 1262
BseMII CTCAG 6 cut(s) 599, 693, 794, 1643, 2366, 2711
BseNI ACTGG 5 cut(s) 258, 582, 798, 1043, 1268
BseRI GAGGAG 1 cut(s) 2113
BseSI GKGCMC 1 cut(s) 2308
BseXI GCAGC 2 cut(s) 1285, 1921
BseYI CCCAGC 1 cut(s) 1930
BsgI GTGCAG 1 cut(s) 363
BshFI GGCC 3 cut(s) 626, 1042, 2675
BshNI GGYRCC 1 cut(s) 2226
BsiHKAI GWGCWC 1 cut(s) 2308
BsiHKCI CYCGRG 1 cut(s) 1236
BsiSI CCGG 5 cut(s) 886, 1215, 1431, 2078, 2231
BslFI GGGAC 5 cut(s) 290, 413, 434, 1259, 1431
BslI CCNNNNNNNGG 4 cut(s) 500, 1242, 1243, 1533
BsmAI GTCTC 4 cut(s) 1696, 2318, 2500, 2644
BsmFI GGGAC 5 cut(s) 290, 413, 434, 1259, 1431
BsmI GAATGC 1 cut(s) 957
BsnI GGCC 3 cut(s) 626, 1042, 2675
BsoBI CYCGRG 1 cut(s) 1236
Bsp1286I GDGCHC 1 cut(s) 2308
Bsp13I TCCGGA 1 cut(s) 2077
Bsp143I GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
Bsp19I CCATGG 1 cut(s) 416
BspACI CCGC 9 cut(s) 77, 266, 821, 981, 1085, 1346, 1399, 1706, 2479
BspANI GGCC 3 cut(s) 626, 1042, 2675
BspCNI CTCAG 6 cut(s) 600, 694, 793, 1642, 2367, 2712
BspEI TCCGGA 1 cut(s) 2077
BspHI TCATGA 1 cut(s) 2562
BspLI GGNNCC 3 cut(s) 1350, 2228, 2588
BspMAI CTGCAG 1 cut(s) 1357
BspMI ACCTGC 1 cut(s) 1360
BspPI GGATC 2 cut(s) 1627, 1852
BspT107I GGYRCC 1 cut(s) 2226
BsrDI GCAATG 2 cut(s) 1109, 1262
BsrI ACTGG 5 cut(s) 258, 582, 798, 1043, 1268
BssECI CCNNGG 4 cut(s) 416, 1037, 1647, 2590
BssMI GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
BssSI CACGAG 1 cut(s) 1529
BssT1I CCWWGG 3 cut(s) 416, 1037, 2590
Bst2BI CACGAG 1 cut(s) 1529
Bst2UI CCWGG 2 cut(s) 318, 1223
Bst6I CTCTTC 3 cut(s) 634, 2030, 2593
BstC8I GCNNGC 2 cut(s) 1495, 1499
BstDEI CTNAG 7 cut(s) 608, 702, 780, 1146, 1629, 2375, 2720
BstDSI CCRYGG 1 cut(s) 416
BstF5I GGATG 8 cut(s) 274, 304, 489, 965, 1189, 1880, 2220, 2487
BstKTI GATC 5 cut(s) 1072, 1099, 1635, 1860, 2220
BstMAI GTCTC 4 cut(s) 1696, 2318, 2500, 2644
BstMBI GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
BstMWI GCNNNNNNNGC 2 cut(s) 1352, 2011
BstNI CCWGG 2 cut(s) 318, 1223
BstNSI RCATGY 6 cut(s) 141, 283, 352, 728, 749, 1731
BstSCI CCNGG 4 cut(s) 316, 884, 1221, 2229
BstSFI CTRYAG 4 cut(s) 121, 1353, 1502, 2517
BstSLI GKGCMC 1 cut(s) 2308
BstV1I GCAGC 2 cut(s) 1285, 1921
BstV2I GAAGAC 1 cut(s) 1142
BstX2I RGATCY 1 cut(s) 1632
BstYI RGATCY 1 cut(s) 1632
BsuRI GGCC 3 cut(s) 626, 1042, 2675
BtgI CCRYGG 1 cut(s) 416
BtsCI GGATG 8 cut(s) 274, 304, 489, 965, 1189, 1880, 2220, 2487
BtsI GCAGTG 1 cut(s) 1773
BtsIMutI CAGTG 6 cut(s) 791, 1050, 1773, 2277, 2306, 2372
BveI ACCTGC 1 cut(s) 1360
Cac8I GCNNGC 2 cut(s) 1495, 1499
CciI TCATGA 1 cut(s) 2562
Cfr13I GGNCC 3 cut(s) 624, 888, 2674
CseI GACGC 2 cut(s) 1167, 2020
Csp6I GTAC 4 cut(s) 236, 251, 472, 882
CviQI GTAC 4 cut(s) 236, 251, 472, 882
DdeI CTNAG 7 cut(s) 608, 702, 780, 1146, 1629, 2375, 2720
DpnI GATC 5 cut(s) 1071, 1098, 1634, 1859, 2219
DpnII GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
DriI GACNNNNNGTC 1 cut(s) 2403
EaeI YGGCCR 1 cut(s) 1040
Eam1104I CTCTTC 3 cut(s) 634, 2030, 2593
Eam1105I GACNNNNNGTC 1 cut(s) 2403
EarI CTCTTC 3 cut(s) 634, 2030, 2593
EciI GGCGGA 2 cut(s) 281, 1361
Eco130I CCWWGG 3 cut(s) 416, 1037, 2590
Eco32I GATATC 1 cut(s) 1428
Eco47I GGWCC 1 cut(s) 888
Eco57I CTGAAG 3 cut(s) 1301, 2486, 2705
Eco88I CYCGRG 1 cut(s) 1236
EcoRII CCWGG 2 cut(s) 316, 1221
EcoRV GATATC 1 cut(s) 1428
EcoT14I CCWWGG 3 cut(s) 416, 1037, 2590
EcoT22I ATGCAT 3 cut(s) 675, 957, 1111
ErhI CCWWGG 3 cut(s) 416, 1037, 2590
FalI AAGNNNNNCTT 4 cut(s) 825, 857, 1274, 1306
FaqI GGGAC 5 cut(s) 290, 413, 434, 1259, 1431
FauI CCCGC 1 cut(s) 814
FauNDI CATATG 2 cut(s) 240, 1489
FbaI TGATCA 2 cut(s) 1096, 2217
FblI GTMKAC 3 cut(s) 124, 645, 1983
Fnu4HI GCNGC 4 cut(s) 982, 1299, 1400, 1935
FokI GGATG 8 cut(s) 281, 311, 476, 952, 1176, 1867, 2227, 2494
Fsp4HI GCNGC 4 cut(s) 982, 1299, 1400, 1935
FspBI CTAG 4 cut(s) 464, 1302, 1719, 2360
GluI GCNGC 4 cut(s) 982, 1299, 1400, 1935
GsaI CCCAGC 1 cut(s) 1934
GsuI CTGGAG 1 cut(s) 1938
HaeIII GGCC 3 cut(s) 626, 1042, 2675
HapII CCGG 5 cut(s) 886, 1215, 1431, 2078, 2231
HgaI GACGC 2 cut(s) 1167, 2020
HincII GTYRAC 2 cut(s) 2010, 2136
HindII GTYRAC 2 cut(s) 2010, 2136
HpaII CCGG 5 cut(s) 886, 1215, 1431, 2078, 2231
HphI GGTGA 7 cut(s) 1106, 2036, 2128, 2344, 2503, 2515, 2672
Hpy166II GTNNAC 7 cut(s) 125, 514, 646, 1984, 2010, 2136, 2306
Hpy8I GTNNAC 7 cut(s) 125, 514, 646, 1984, 2010, 2136, 2306
Hpy99I CGWCG 5 cut(s) 376, 2422, 2425, 2428, 2431
HpyAV CCTTC 9 cut(s) 266, 390, 605, 1509, 1723, 2493, 2520, 2680, 2687
HpyCH4IV ACGT 2 cut(s) 371, 1395
HpyF10VI GCNNNNNNNGC 2 cut(s) 1352, 2011
HpyF3I CTNAG 7 cut(s) 608, 702, 780, 1146, 1629, 2375, 2720
HpySE526I ACGT 2 cut(s) 371, 1395
Kpn2I TCCGGA 1 cut(s) 2077
Ksp22I TGATCA 2 cut(s) 1096, 2217
Kzo9I GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
LmnI GCTCC 1 cut(s) 2019
Lsp1109I GCAGC 2 cut(s) 1285, 1921
LweI GCATC 6 cut(s) 974, 1096, 1198, 2050, 2340, 2538
MaeI CTAG 4 cut(s) 464, 1302, 1719, 2360
MaeII ACGT 2 cut(s) 371, 1395
MaeIII GTNAC 1 cut(s) 1478
MalI GATC 5 cut(s) 1071, 1098, 1634, 1859, 2219
MboI GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
MfeI CAATTG 1 cut(s) 2510
MflI RGATCY 1 cut(s) 1632
MhlI GDGCHC 1 cut(s) 2308
MlsI TGGCCA 1 cut(s) 1042
MluNI TGGCCA 1 cut(s) 1042
MlyI GAGTC 6 cut(s) 772, 1248, 1453, 1466, 2164, 2413
MmeI TCCRAC 3 cut(s) 681, 2223, 2292
Mox20I TGGCCA 1 cut(s) 1042
Mph1103I ATGCAT 3 cut(s) 675, 957, 1111
MroI TCCGGA 1 cut(s) 2077
MroXI GAANNNNTTC 1 cut(s) 1258
MscI TGGCCA 1 cut(s) 1042
MseI TTAA 4 cut(s) 24, 582, 1661, 2366
MslI CAYNNNNRTG 4 cut(s) 530, 1104, 1194, 1340
Msp20I TGGCCA 1 cut(s) 1042
MspA1I CMGCKG 2 cut(s) 607, 1934
MspI CCGG 5 cut(s) 886, 1215, 1431, 2078, 2231
MspR9I CCNGG 4 cut(s) 318, 886, 1223, 2231
MunI CAATTG 1 cut(s) 2510
Mva1269I GAATGC 1 cut(s) 957
MvaI CCWGG 2 cut(s) 318, 1223
MwoI GCNNNNNNNGC 2 cut(s) 1352, 2011
NciI CCSGG 2 cut(s) 886, 2231
NcoI CCATGG 1 cut(s) 416
NdeI CATATG 2 cut(s) 240, 1489
NdeII GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
NlaIV GGNNCC 3 cut(s) 1350, 2228, 2588
NmuCI GTSAC 1 cut(s) 1478
NsiI ATGCAT 3 cut(s) 675, 957, 1111
NspI RCATGY 6 cut(s) 141, 283, 352, 728, 749, 1731
PagI TCATGA 1 cut(s) 2562
PciI ACATGT 3 cut(s) 137, 279, 724
PcsI WCGNNNNNNNCGW 2 cut(s) 2423, 2426
PctI GAATGC 1 cut(s) 957
PdmI GAANNNNTTC 1 cut(s) 1258
PfeI GAWTC 7 cut(s) 146, 1021, 1048, 1121, 1473, 1652, 2267
PkrI GCNGC 4 cut(s) 983, 1300, 1401, 1936
PleI GAGTC 6 cut(s) 772, 1247, 1452, 1465, 2164, 2412
PpsI GAGTC 6 cut(s) 772, 1247, 1452, 1465, 2164, 2412
PscI ACATGT 3 cut(s) 137, 279, 724
PshBI ATTAAT 1 cut(s) 24
Psp6I CCWGG 2 cut(s) 316, 1221
PspFI CCCAGC 1 cut(s) 1930
PspGI CCWGG 2 cut(s) 316, 1221
PspN4I GGNNCC 3 cut(s) 1350, 2228, 2588
PspPI GGNCC 3 cut(s) 624, 888, 2674
PstI CTGCAG 1 cut(s) 1357
PsuI RGATCY 1 cut(s) 1632
PvuII CAGCTG 2 cut(s) 607, 1934
RsaI GTAC 4 cut(s) 237, 252, 473, 883
RsaNI GTAC 4 cut(s) 236, 251, 472, 882
RseI CAYNNNNRTG 4 cut(s) 530, 1104, 1194, 1340
SaqAI TTAA 4 cut(s) 24, 582, 1661, 2366
SatI GCNGC 4 cut(s) 982, 1299, 1400, 1935
Sau3AI GATC 5 cut(s) 1069, 1096, 1632, 1857, 2217
Sau96I GGNCC 3 cut(s) 624, 888, 2674
SchI GAGTC 6 cut(s) 772, 1248, 1453, 1466, 2164, 2413
ScrFI CCNGG 4 cut(s) 318, 886, 1223, 2231
SduI GDGCHC 1 cut(s) 2308
SfaNI GCATC 6 cut(s) 974, 1096, 1198, 2050, 2340, 2538
SfcI CTRYAG 4 cut(s) 121, 1353, 1502, 2517
SinI GGWCC 1 cut(s) 888
SmiMI CAYNNNNRTG 4 cut(s) 530, 1104, 1194, 1340
SmlI CTYRAG 1 cut(s) 2000
SmoI CTYRAG 1 cut(s) 2000
SsiI CCGC 9 cut(s) 77, 266, 821, 981, 1085, 1346, 1399, 1706, 2479
SspI AATATT 1 cut(s) 28
SspMI CTAG 4 cut(s) 464, 1302, 1719, 2360
StyD4I CCNGG 4 cut(s) 316, 884, 1221, 2229
StyI CCWWGG 3 cut(s) 416, 1037, 2590
TaiI ACGT 2 cut(s) 374, 1398
TaqI TCGA 3 cut(s) 1829, 1848, 2086
TaqII GACCGA 2 cut(s) 1497, 2001
TatI WGTACW 2 cut(s) 250, 471
TauI GCSGC 2 cut(s) 984, 1402
TfiI GAWTC 7 cut(s) 146, 1021, 1048, 1121, 1473, 1652, 2267
Tru1I TTAA 4 cut(s) 24, 582, 1661, 2366
Tru9I TTAA 4 cut(s) 24, 582, 1661, 2366
TscAI CASTG 6 cut(s) 798, 1050, 1780, 2277, 2313, 2379
TseFI GTSAC 1 cut(s) 1478
TseI GCWGC 2 cut(s) 1298, 1934
Tsp45I GTSAC 1 cut(s) 1478
TspGWI ACGGA 1 cut(s) 1907
TspRI CASTG 6 cut(s) 798, 1050, 1780, 2277, 2313, 2379
VneI GTGCAC 1 cut(s) 2304
VpaK11BI GGWCC 1 cut(s) 888
VspI ATTAAT 1 cut(s) 24
XapI RAATTY 7 cut(s) 16, 38, 61, 613, 694, 2063, 2073
XceI RCATGY 6 cut(s) 141, 283, 352, 728, 749, 1731
XmiI GTMKAC 3 cut(s) 124, 645, 1983
XmnI GAANNNNTTC 1 cut(s) 1258
XspI CTAG 4 cut(s) 464, 1302, 1719, 2360
Zsp2I ATGCAT 3 cut(s) 675, 957, 1111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.