pycom04g02410

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0003234
Physical Location & Seq
Forward (+)
2137200 .. 2141860
4661 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2361 bp
ATGGTAATTGTGTGGAGTCAGTTGGACATAAACCCTGAAAACAATCCCCTGCTCCAAGCTTCTCGCAGCTCAAAAATGAGCAGAAGGTGGTTGAAAACTCTCCTCTGGCAATCAATTTCCGCCATATCTCCGTCCCCTCTGAAGTCCAGCCCATTTTTCTCCACAAACCCATCACAACCATTCCCTTCTCCATTCAAATCCTCCCACCAAAGTCTAAAGCTTTGCTTTCCCAGATTACTTTGCACTTCTTGGCAGGACAATCTCGATGGTCTGTTCGATCCCAACTATTTGTTCAAGCCGGAGAGTTCTGGAGTTGAGTCTATTTCAGCAGAGGAATTCGCCTCTCTGCGCGATTCGGTGTTGGATACCAGTGCTGGTGGTAAACAAATTGGGTATAGTCACACTGCTCCTGTGTACGACGCGTTGTTAGAGTTATTGGAGTGTGGTAATAAGAGGGTAGAGGAACATTTTCTGCAAGAAATTAAGGGTGATGATAGAGAGGTGCTTAGGAAGTTGCTTAATGTGTTGATTCGGAAGTACTGCCAAAATGGGTTGTGGAATGTAGCTTTGGAAGAGCTGGGGAGGCTTAAGGATATCGGATACAAGCCAACTCAAGCAACTTACAATGCTTTAGTTCTAGTGGTTCTAGAAGCAGATAAGTTGGACACAGCACACTTGGTCCATGTGGAGATGTTGGATTCAGGGTTTAAGATGGATGAGTATACATTTGGTTCATTTGGTTCATTTGTTCACACCCTTTGCAAAGCTGGGAGGTGGAAGGAAGCTCTCGCATTGGTTGAGAAGGAAGAGTTTGTGCCCAATACTATTCTTTACACGAACATGATATCTGGGTTGTGTGAAGCTTCACATTTTGAGGAAGCTAAGGATTTTTTGAACAGAATGCGATGCGATTCTTGCATTCCTAATGTTGTGACCTGTAGGACTTTGCTTTGTGGGTGTTTGAAGAAAAGACAGCTCGGTAGGTGCAAGAGAATTCTTAGTATGATGATCACAGAAGGTCGTATTCCAAGCCCTCAGATATTTAGTTCTCTTGTACATGCTTATTGTAGGTCCGGAGATCACTCTTGTGCTCATAAGTTACTTAAGAAAATGGTAAGATGTGAGTGCCAGACAGGCTACGTGGTTTACAATATCTTGATTGATGGTATATGTGGAAACAAGGAATTACCAAGCCCAAATATGTTAGATTTGTCTGAAAAAACTTATGGTGAGATGCTTGATGCAGGGGTTATGCTAAGTAAGGTCAATGTGAGCAATTTTGCATGGTGTCTTTGCGGTGCCGGAAAATTTGAGAAAGCCTATAAGGTTGTCAGCGAAATGATGAACAGGGGTTTTGTTCCTGACACTAATATGTATGCTAATGTTATTGGCTTTTTGTGTAATGCCTCCAAGAAGGTGTCTGATGCTGATCAACTATTTGAGATGATGTTGACTGAAGGTTGCAGTCCTAATGTTATTACTTATACTGCTTTAATTGATGGTCATTGTAAAGCTGGTAGAATTGAAAAGGCTTGCCAGATATATGAGAGAATGAGAGATGGATTTTGCAAGTATGGGAAGCTAGATGAAGCACAAGAGGTGTTTGCTAAGATGTCAGAGCAAGGGTACAGTCCAAATGTGTATACGTACAGTTCTTTGATTGATAGGTTGTTTAAGGATAAAAGACTGGATCTCGCTTCAAAAGTCTTGTCCAAAATGTTAGAACACTCTTGTGCACCAAATGTTGTTATCTACACAGAGATGATTGATGCCCTGTGTAAAGTTGGAAAAACAGATGAAGCCTATAAGCTTATGCTGATGATGGAAGAAAAAGGGTGTTATCCGAATGTTGTGACTTATACTGCAATGATAGATGGCTTTGGGAAAGCAGGTAATATCGAAAAGTGTGTTGAGCTTTTTAAACAAATGAGCTCTGAGGGTTGTGCTCCAAATTTTATCTCCTACGGGGTTTTGATAAATCATTGCTGTTCAACTGGACTACTGGATGAAGCTCATAAGCTTTTGGATGAAATGAAACAAACACATTGGCCTAAGCATATGGCTGGAATGTTGGAAGTGGCTCTTGAGCTGCTTAAAGAGATTTCGTCATCTTCACCGTTTACATCTGTGAACAAGAATATGTACACTTCATTGATTGAGAGTCTTTCACATGCAAATAAGGTCGGTAAGGCACTGGAGATGTTTGCAGACATGATGAGGCATGGTGGTTTTCCAGAGCTGGATACATTCTTTCATCTTATTAAAGGGCTTATTAAAGCTAACAATTGGGACGAAGCTCTTCAACTACAGATAGCATATGCCACATGGTTTCCATTGGCATATGCAAGAAGAGACATCTGA

Protein Analysis

787

Amino Acids

88.46

Weight (kDa)

6.47

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 271 - 302 4.4e-06 PPR repeat
PPR_2 PF13041 273 - 322 8.5e-12 PPR repeat family
PPR_2 PF13041 347 - 391 1.1e-06 PPR repeat family
PPR_long PF17177 357 - 520 1.4e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 442 - 500 9.3e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 454 - 504 9.4e-12 PPR repeat family
PPR_1 PF12854 487 - 519 1.6e-13 PPR repeat
PPR_2 PF13041 490 - 520 2.4e-08 PPR repeat family
PPR PF01535 493 - 519 1.5e-07 PPR repeat
PPR_2 PF13041 520 - 559 9.4e-11 PPR repeat family
PPR_3 PF13812 534 - 591 9.3e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 542 - 573 1.2e-07 PPR repeat
PPR_long PF17177 564 - 681 4.7e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 569 - 629 2.3e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 577 - 608 3.3e-08 PPR repeat
PPR_2 PF13041 580 - 629 3.7e-17 PPR repeat family
PPR PF01535 583 - 613 1.9e-06 PPR repeat
PPR_3 PF13812 607 - 662 1.8e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 611 - 644 6.6e-11 PPR repeat
PPR_2 PF13041 615 - 663 3.9e-16 PPR repeat family
PPR PF01535 618 - 648 8.2e-10 PPR repeat
PPR_1 PF12854 647 - 679 5.2e-09 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1880
AccB1I GGYRCC 1 cut(s) 1298
AccI GTMKAC 2 cut(s) 722, 1643
AccII CGCG 2 cut(s) 351, 422
AccIII TCCGGA 1 cut(s) 1073
AciI CCGC 2 cut(s) 120, 1296
AclWI GGATC 2 cut(s) 272, 1698
AcsI RAATTY 4 cut(s) 335, 993, 1307, 1951
AcuI CTGAAG 2 cut(s) 161, 1476
AfaI GTAC 6 cut(s) 416, 539, 1056, 1628, 1649, 2144
AflII CTTAAG 2 cut(s) 587, 1103
AflIII ACRYGT 1 cut(s) 420
AgsI TTSAA 9 cut(s) 94, 196, 295, 895, 964, 1526, 1701, 1992, 2303
AjuI GAANNNNNNNTTGG 4 cut(s) 275, 307, 551, 583
AleI CACNNNNGTG 2 cut(s) 1086, 1731
Alw21I GWGCWC 4 cut(s) 1093, 1738, 1934, 1948
Alw26I GTCTC 1 cut(s) 2346
Alw44I GTGCAC 1 cut(s) 1734
AlwI GGATC 2 cut(s) 272, 1698
Aor13HI TCCGGA 1 cut(s) 1073
AoxI GGCC 1 cut(s) 2048
ApaLI GTGCAC 1 cut(s) 1734
ApeKI GCWGC 2 cut(s) 66, 2089
ApoI RAATTY 4 cut(s) 335, 993, 1307, 1951
ArsI GACNNNNNNTTYG 2 cut(s) 1694, 1726
Asp700I GAANNNNTTC 2 cut(s) 468, 2298
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 2 cut(s) 679, 1071
AsuHPI GGTGA 3 cut(s) 500, 1241, 2106
AvaII GGWCC 2 cut(s) 679, 1071
BaeGI GKGCMC 2 cut(s) 819, 1738
BanI GGYRCC 1 cut(s) 1298
BanII GRGCYC 1 cut(s) 1934
Bbv12I GWGCWC 4 cut(s) 1093, 1738, 1934, 1948
BbvI GCAGC 2 cut(s) 78, 2076
BccI CCATC 8 cut(s) 178, 260, 706, 1157, 1493, 1553, 1816, 1868
BciVI GTATCC 3 cut(s) 358, 593, 2236
BclI TGATCA 2 cut(s) 1008, 1429
BcoDI GTCTC 1 cut(s) 2346
BfaI CTAG 3 cut(s) 638, 647, 1583
BfmI CTRYAG 2 cut(s) 937, 2306
BfrI CTTAAG 2 cut(s) 587, 1103
BfuAI ACCTGC 1 cut(s) 1880
BfuI GTATCC 3 cut(s) 358, 593, 2236
BglI GCCNNNNNGGC 1 cut(s) 1134
BisI GCNGC 2 cut(s) 67, 2090
BlsI GCNGC 2 cut(s) 68, 2091
BmcAI AGTACT 1 cut(s) 539
Bme18I GGWCC 2 cut(s) 679, 1071
BmgT120I GGNCC 2 cut(s) 679, 1071
BmiI GGNNCC 1 cut(s) 1300
BmsI GCATC 5 cut(s) 896, 1224, 1231, 1414, 1759
BpmI CTGGAG 2 cut(s) 330, 2216
Bpu10I CCTNAGC 3 cut(s) 506, 882, 2052
BpuEI CTTGAG 2 cut(s) 597, 2105
BsaAI YACGTR 2 cut(s) 1141, 1647
BsaBI GATNNNNATC 1 cut(s) 1428
BsaWI WCCGGW 1 cut(s) 1073
Bse1I ACTGG 5 cut(s) 369, 1692, 1999, 2007, 2199
Bse3DI GCAATG 2 cut(s) 1872, 1981
Bse8I GATNNNNATC 1 cut(s) 1428
BseAI TCCGGA 1 cut(s) 1073
BseGI GGATG 3 cut(s) 721, 2011, 2032
BseJI GATNNNNATC 1 cut(s) 1428
BseMI GCAATG 2 cut(s) 1872, 1981
BseMII CTCAG 2 cut(s) 1049, 1926
BseNI ACTGG 5 cut(s) 369, 1692, 1999, 2007, 2199
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 2 cut(s) 819, 1738
BseXI GCAGC 2 cut(s) 78, 2076
BseYI CCCAGC 2 cut(s) 577, 767
Bsh1236I CGCG 2 cut(s) 351, 422
BshFI GGCC 1 cut(s) 2050
BshNI GGYRCC 1 cut(s) 1298
BsiHKAI GWGCWC 4 cut(s) 1093, 1738, 1934, 1948
BsiSI CCGG 3 cut(s) 299, 1074, 1302
BslFI GGGAC 2 cut(s) 118, 2303
BsmAI GTCTC 1 cut(s) 2346
BsmFI GGGAC 2 cut(s) 118, 2303
BsmI GAATGC 2 cut(s) 906, 918
BsnI GGCC 1 cut(s) 2050
Bsp1286I GDGCHC 5 cut(s) 819, 1093, 1738, 1934, 1948
Bsp13I TCCGGA 1 cut(s) 1073
Bsp1407I TGTACA 2 cut(s) 1054, 2142
Bsp143I GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
BspACI CCGC 2 cut(s) 120, 1296
BspANI GGCC 1 cut(s) 2050
BspCNI CTCAG 2 cut(s) 1048, 1927
BspEI TCCGGA 1 cut(s) 1073
BspFNI CGCG 2 cut(s) 351, 422
BspLI GGNNCC 1 cut(s) 1300
BspMI ACCTGC 1 cut(s) 1880
BspPI GGATC 2 cut(s) 272, 1698
BspQI GCTCTTC 2 cut(s) 567, 2304
BspT107I GGYRCC 1 cut(s) 1298
BspTI CTTAAG 2 cut(s) 587, 1103
BsrDI GCAATG 2 cut(s) 1872, 1981
BsrGI TGTACA 2 cut(s) 1054, 2142
BsrI ACTGG 5 cut(s) 369, 1692, 1999, 2007, 2199
BssMI GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
BssNAI GTATAC 2 cut(s) 723, 1644
Bst1107I GTATAC 2 cut(s) 723, 1644
Bst4CI ACNGT 3 cut(s) 1631, 1652, 2118
Bst6I CTCTTC 4 cut(s) 567, 801, 2304, 2344
BstAFI CTTAAG 2 cut(s) 587, 1103
BstAUI TGTACA 2 cut(s) 1054, 2142
BstBAI YACGTR 2 cut(s) 1141, 1647
BstC8I GCNNGC 1 cut(s) 1534
BstDEI CTNAG 8 cut(s) 506, 882, 998, 1035, 1256, 1608, 1935, 2052
BstF5I GGATG 3 cut(s) 721, 2011, 2032
BstFNI CGCG 2 cut(s) 351, 422
BstHHI GCGC 1 cut(s) 351
BstKTI GATC 5 cut(s) 280, 1011, 1081, 1432, 1693
BstMAI GTCTC 1 cut(s) 2346
BstMBI GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
BstMWI GCNNNNNNNGC 3 cut(s) 583, 915, 1134
BstNSI RCATGY 2 cut(s) 1061, 2174
BstSFI CTRYAG 2 cut(s) 937, 2306
BstSLI GKGCMC 2 cut(s) 819, 1738
BstSNI TACGTA 1 cut(s) 1647
BstUI CGCG 2 cut(s) 351, 422
BstV1I GCAGC 2 cut(s) 78, 2076
BstX2I RGATCY 1 cut(s) 1690
BstYI RGATCY 1 cut(s) 1690
BstZ17I GTATAC 2 cut(s) 723, 1644
BsuI GTATCC 3 cut(s) 358, 593, 2236
BsuRI GGCC 1 cut(s) 2050
BtgZI GCGATG 1 cut(s) 919
BtsCI GGATG 3 cut(s) 721, 2011, 2032
BtsI GCAGTG 1 cut(s) 402
BtsIMutI CAGTG 3 cut(s) 376, 402, 2192
BveI ACCTGC 1 cut(s) 1880
Cac8I GCNNGC 1 cut(s) 1534
CfoI GCGC 1 cut(s) 351
Cfr13I GGNCC 2 cut(s) 679, 1071
CseI GACGC 1 cut(s) 428
Csp6I GTAC 6 cut(s) 415, 538, 1055, 1627, 1648, 2143
CviAII CATG 8 cut(s) 683, 841, 1058, 1284, 2171, 2212, 2222, 2325
CviQI GTAC 6 cut(s) 415, 538, 1055, 1627, 1648, 2143
DdeI CTNAG 8 cut(s) 506, 882, 998, 1035, 1256, 1608, 1935, 2052
DpnI GATC 5 cut(s) 279, 1010, 1080, 1431, 1692
DpnII GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
DraI TTTAAA 1 cut(s) 1921
Eam1104I CTCTTC 4 cut(s) 567, 801, 2304, 2344
EarI CTCTTC 4 cut(s) 567, 801, 2304, 2344
EciI GGCGGA 1 cut(s) 109
Ecl136II GAGCTC 1 cut(s) 1932
Eco105I TACGTA 1 cut(s) 1647
Eco24I GRGCYC 1 cut(s) 1934
Eco32I GATATC 2 cut(s) 595, 846
Eco47I GGWCC 2 cut(s) 679, 1071
Eco53kI GAGCTC 1 cut(s) 1932
Eco57I CTGAAG 2 cut(s) 161, 1476
EcoICRI GAGCTC 1 cut(s) 1932
EcoRI GAATTC 2 cut(s) 335, 993
EcoRV GATATC 2 cut(s) 595, 846
EcoT38I GRGCYC 1 cut(s) 1934
FaeI CATG 8 cut(s) 686, 844, 1061, 1287, 2174, 2215, 2225, 2328
FalI AAGNNNNNCTT 4 cut(s) 209, 241, 2067, 2099
FaqI GGGAC 2 cut(s) 118, 2303
FatI CATG 8 cut(s) 682, 840, 1057, 1283, 2170, 2211, 2221, 2324
FauNDI CATATG 3 cut(s) 2058, 2317, 2341
FbaI TGATCA 2 cut(s) 1008, 1429
FblI GTMKAC 2 cut(s) 722, 1643
Fnu4HI GCNGC 2 cut(s) 67, 2090
FokI GGATG 3 cut(s) 728, 2018, 2039
FriOI GRGCYC 1 cut(s) 1934
Fsp4HI GCNGC 2 cut(s) 67, 2090
FspBI CTAG 3 cut(s) 638, 647, 1583
GlaI GCGC 1 cut(s) 350
GluI GCNGC 2 cut(s) 67, 2090
GsaI CCCAGC 2 cut(s) 581, 771
GsuI CTGGAG 2 cut(s) 330, 2216
HaeIII GGCC 1 cut(s) 2050
HapII CCGG 3 cut(s) 299, 1074, 1302
HgaI GACGC 1 cut(s) 428
HhaI GCGC 1 cut(s) 351
Hin1II CATG 8 cut(s) 686, 844, 1061, 1287, 2174, 2215, 2225, 2328
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HincII GTYRAC 1 cut(s) 1452
HindII GTYRAC 1 cut(s) 1452
HindIII AAGCTT 5 cut(s) 57, 218, 861, 1808, 2018
HinfI GANTC 7 cut(s) 16, 317, 353, 529, 698, 911, 2161
HpaII CCGG 3 cut(s) 299, 1074, 1302
HphI GGTGA 3 cut(s) 500, 1241, 2106
Hpy188III TCNNGA 8 cut(s) 263, 309, 647, 1074, 1156, 1361, 2084, 2234
Hpy99I CGWCG 1 cut(s) 422
HpyAV CCTTC 7 cut(s) 78, 195, 772, 796, 1010, 1408, 1451
HpyCH4III ACNGT 3 cut(s) 1631, 1652, 2118
HpyCH4IV ACGT 2 cut(s) 1140, 1646
HpyF10VI GCNNNNNNNGC 3 cut(s) 583, 915, 1134
HpyF3I CTNAG 8 cut(s) 506, 882, 998, 1035, 1256, 1608, 1935, 2052
HpySE526I ACGT 2 cut(s) 1140, 1646
Hsp92II CATG 8 cut(s) 686, 844, 1061, 1287, 2174, 2215, 2225, 2328
HspAI GCGC 1 cut(s) 349
Kpn2I TCCGGA 1 cut(s) 1073
Ksp22I TGATCA 2 cut(s) 1008, 1429
Kzo9I GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
LguI GCTCTTC 2 cut(s) 567, 2304
LmnI GCTCC 3 cut(s) 57, 412, 1951
Lsp1109I GCAGC 2 cut(s) 78, 2076
LweI GCATC 5 cut(s) 896, 1224, 1231, 1414, 1759
MaeI CTAG 3 cut(s) 638, 647, 1583
MaeII ACGT 2 cut(s) 1140, 1646
MaeIII GTNAC 4 cut(s) 398, 931, 1098, 1852
MalI GATC 5 cut(s) 279, 1010, 1080, 1431, 1692
MboI GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
MboII GAAGA 7 cut(s) 584, 818, 976, 1838, 2103, 2291, 2361
MfeI CAATTG 1 cut(s) 2284
MflI RGATCY 1 cut(s) 1690
MhlI GDGCHC 5 cut(s) 819, 1093, 1738, 1934, 1948
MluI ACGCGT 1 cut(s) 420
MlyI GAGTC 3 cut(s) 25, 326, 2170
MmeI TCCRAC 5 cut(s) 342, 642, 675, 1765, 2052
MroI TCCGGA 1 cut(s) 1073
MroXI GAANNNNTTC 2 cut(s) 468, 2298
MslI CAYNNNNRTG 5 cut(s) 839, 1086, 1370, 1731, 1760
MspCI CTTAAG 2 cut(s) 587, 1103
MspI CCGG 3 cut(s) 299, 1074, 1302
MunI CAATTG 1 cut(s) 2284
Mva1269I GAATGC 2 cut(s) 906, 918
MvnI CGCG 2 cut(s) 351, 422
MwoI GCNNNNNNNGC 3 cut(s) 583, 915, 1134
NdeI CATATG 3 cut(s) 2058, 2317, 2341
NdeII GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
NlaIII CATG 8 cut(s) 686, 844, 1061, 1287, 2174, 2215, 2225, 2328
NlaIV GGNNCC 1 cut(s) 1300
NmuCI GTSAC 3 cut(s) 398, 931, 1852
NspI RCATGY 2 cut(s) 1061, 2174
OliI CACNNNNGTG 2 cut(s) 1086, 1731
PciSI GCTCTTC 2 cut(s) 567, 2304
PctI GAATGC 2 cut(s) 906, 918
PdmI GAANNNNTTC 2 cut(s) 468, 2298
PfeI GAWTC 4 cut(s) 353, 529, 698, 911
PkrI GCNGC 2 cut(s) 68, 2091
PleI GAGTC 3 cut(s) 24, 325, 2169
PpsI GAGTC 3 cut(s) 24, 325, 2169
Ppu21I YACGTR 2 cut(s) 1141, 1647
Psp124BI GAGCTC 1 cut(s) 1934
PspFI CCCAGC 2 cut(s) 577, 767
PspN4I GGNNCC 1 cut(s) 1300
PspPI GGNCC 2 cut(s) 679, 1071
PsuI RGATCY 1 cut(s) 1690
RsaI GTAC 6 cut(s) 416, 539, 1056, 1628, 1649, 2144
RsaNI GTAC 6 cut(s) 415, 538, 1055, 1627, 1648, 2143
RseI CAYNNNNRTG 5 cut(s) 839, 1086, 1370, 1731, 1760
SacI GAGCTC 1 cut(s) 1934
SapI GCTCTTC 2 cut(s) 567, 2304
SatI GCNGC 2 cut(s) 67, 2090
Sau3AI GATC 5 cut(s) 277, 1008, 1078, 1429, 1690
Sau96I GGNCC 2 cut(s) 679, 1071
ScaI AGTACT 1 cut(s) 539
SchI GAGTC 3 cut(s) 25, 326, 2170
SduI GDGCHC 5 cut(s) 819, 1093, 1738, 1934, 1948
SfaNI GCATC 5 cut(s) 896, 1224, 1231, 1414, 1759
SfcI CTRYAG 2 cut(s) 937, 2306
SinI GGWCC 2 cut(s) 679, 1071
SmiMI CAYNNNNRTG 5 cut(s) 839, 1086, 1370, 1731, 1760
SmlI CTYRAG 4 cut(s) 587, 612, 1103, 2084
SmoI CTYRAG 4 cut(s) 587, 612, 1103, 2084
SnaBI TACGTA 1 cut(s) 1647
SsiI CCGC 2 cut(s) 120, 1296
SspMI CTAG 3 cut(s) 638, 647, 1583
SstI GAGCTC 1 cut(s) 1934
TaaI ACNGT 3 cut(s) 1631, 1652, 2118
TaiI ACGT 2 cut(s) 1143, 1649
TaqI TCGA 3 cut(s) 264, 276, 1899
TatI WGTACW 3 cut(s) 537, 1054, 2142
TfiI GAWTC 4 cut(s) 353, 529, 698, 911
TscAI CASTG 3 cut(s) 376, 409, 2199
TseFI GTSAC 3 cut(s) 398, 931, 1852
TseI GCWGC 2 cut(s) 66, 2089
Tsp45I GTSAC 3 cut(s) 398, 931, 1852
TspGWI ACGGA 1 cut(s) 120
TspRI CASTG 3 cut(s) 376, 409, 2199
Vha464I CTTAAG 2 cut(s) 587, 1103
VneI GTGCAC 1 cut(s) 1734
VpaK11BI GGWCC 2 cut(s) 679, 1071
XapI RAATTY 4 cut(s) 335, 993, 1307, 1951
XbaI TCTAGA 1 cut(s) 646
XceI RCATGY 2 cut(s) 1061, 2174
XmiI GTMKAC 2 cut(s) 722, 1643
XmnI GAANNNNTTC 2 cut(s) 468, 2298
XspI CTAG 3 cut(s) 638, 647, 1583
ZrmI AGTACT 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.