Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005883

Physical Location & Seq

Genomic Coordinates Reverse (-)

15327827 .. 15332720

Gene Structure 4894 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGCGGATCGTACCTGCACCAAAGTGCATAAACATTATTATTTTTTATCACTACGGTAAAACATCATCTAGAAGCCTCTCTCATATCAACATCATCCGAATTACGAGAATATCCCTAGTGCCGCTTCCCTTCCAGCTCACAGCTTTATACCCTCCGTTCAAAAAACCGAAAGGCTCTTCCCATTCTCTCTCCGTCGTCTTCCTCCTCCATCAGAGTATCTCTCTCTCTCTCTCTCTCTCATTCATCGAGCACCCAGATTTCTTCAGATTTTGGATGGGAACCAAGGAGCATGACACTGTTTTTAAAGATGACGAGCCTACTGCTATTGACCCCAATAATATTTCGTTGAGCCAGGTTGATTCTTCAACAAGCACAGTTCTTTGCGATTCAAATGTAACTACTGAAAGTAATGAAGTTAAAAAGTTAAGTGAGGCTGTCAGTAACATTAACAATACCCCATATATTTATAGACAAGATGTCGTCAGGAGCAAGAGTGGTATGACTGGGATTGTGACTGAGGTTGCTGGTGATTCAGATTCTGATAGTAGCATCACTGATGACGAGGATGACGATGAAGATGATGACTGCGACGACGATGAGAATGAGGAAGAAGGTGGTAATAACAATAATACTACTCATGGGAATGGTGACAAGAACAAAAATGGTAGTAATGATAAGACTGGTCCCCTTCCCGCTGACCAGGTTCGAGTACTTTGGATGGATGAGACTGAGTCAACCCAAAACATTAATGATTTAACAGTTGTTGATCGAGGGTTCTTACATGGGGATTTTGTTGCTGCTGCTTCTGACCCAACCGGGCAAGTCGGTGTTGTGGTGGATGTCAATATCTCTGTTGATCTATTAGCTCCTGATGGGTCAGTCATAAAAGACCTTTCATCCAATGAATTAAAACGTGTGAGGGAGTTCACCGTGGGTGATTATGTGGTCCTTGGTCCCTGGCTAGGTAGGATTGATGATGTTTATGATAATGTGACAGTTTTGTTTGATGATGGTTCTGTGTGTAAAATTATGAAAGCAGAGCCGATGGATCTGAAACCGGTTTCCAAGAATATGCTTGAGGATGTGCATTTCCCTTACTACCCAGGTCAGCGTGTGAAGGCAAGATCGTCAGTTTTCAAGAATGCTAGGTGGCTATCTGGCTTGTGGAAACCTAATCGTGTGGAAGGTACTGTTACTAAGGTTACAGTTGCTTCAGTATTAATTTATTGGATAGCTTCTGCTGGCTGTGGGCCAGATTCTTCTACCGCACCTGCTAAAGAGCAGATTCCCAAGAACTTGAAATTATTGTCTTGTTTTACACATGCAACTTGGCAATTGGGTGATTGGTGTCTTCTTCCCTCATCAGTGTCATCATCTTCCATTCCGTTAGACAAGGGATCATCAAATTTAGAACCTCATGATTCTGTAAGCAGTGACTTAGAACCTACTCAAATGGGTAGTAAGTGCGATTCAGAGGAGAGTGCGCTTGATGAACCAAATGGCAATCACGAATCCATGGACATCGATCTAGTATCTGTATTAGATGGAAACAATGGAAATACTGGAAGGAATACATCTGTTGAATCTAGTTTGTGTAATAGTTTATTGTCAGTTTCAAAGGAGCCAGTTCATGAAACCTGGCCTCTTCATCGCAAAAAGATCCGCAAAGTTGTGGTTAGGAGAGACAAGAAGGCACGGAAGGAAGAAAATTTTGAACGATCCTTTTTGATTGTCAATACCAAGACGACAGTTGATGTGGCATGGCAGGATGGTACAACAGAACTGAAACTGGACTCAAAAGATTTAATTCCGCTTGATAGTCCGGTTGATCACGAATTTGTTGCTGAACAGTATGTGGTGGAGAAGGCGTCTGATGATGGTGATGATGCGTATGAAGCTAGGCGTGTTGGGCTTGTGAAAAGTGTCAATGCCAAGGAGAGAACAGCTTGTGTGAGGTGGTTAAAGCCAGTTTCCAGACCGGAAGATCCTAGAGAGTTTGAGAAGGAGGAAGTTGTGAGTGTCTATGAGCTTGAGGGGCATCCGGATTATGATTACTGTTATGGGGATGTTGTTGTCAGATTGTTGCCAGTTTTTGTCTCTGCACAAATTGCTTCAGGGGCAGACTTAGATGAGGAACCAAAGCAACAAAACGGACCAAGTGATCTTAGTTCCGCTTCTACAAAAAAGGAAGATCTATCTAGTGATGAAGCTTGTTTGGACTTCTTCGATCTTTCTTGGGTTGGAAATATAACTGGTCTTAAGAATGGGGATATTGAAGTTACATGGGCTGATGGGATGGTTTCTACGGTTGGACCTCAAGCAATTTATGTTGTTGGCCGAGCTGATGATGATGACTCCATCGGTGCTGGAAGTGATGCTAGTGATGCTGCTAGTTGGGAAACGGTTAATGATGATGAGATGCCTGCACTATTTGTCCCTGCGAGTACAGAAGAGGAAGTTCGGCTACAAAATGCCATTGGGATGAATTTTGAAGCTGAAGAGAGTGGAGAGAATAATTCTGGGAGGAACCCGGCATTGTCTGTTCCCTTGGCTGCACTTAGGTTCGTTACCAGACTGGCACATGGTATATTCTCAAGAGGACAAAGAAATTTGGATTCAAATTCTTTGGATACTGAAGGTGAGGGCGAAGGTGAAGTTGAGCCTCGGGAAGTAGAAATTGCTCAGGGAGGAGATCGATCGATCTACCTTACGGTGAAGATTCCAGCTCTCAGAAATCTAATGTGGTGGATCCTTATGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

921

Amino Acids

101.22

Weight (kDa)

4.56

Isoelectric Point (pI)

39.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SH3-A_UBE2O	PF23048	155 - 255	1.1e-12	UBE2O, N-terminal SH3-A domain
tSH3-B_UBE2O	PF23046	311 - 441	1.2e-46	UBE2O, tandem tSH3-B domain
SH3-B_UBE2O	PF23043	610 - 682	1.8e-20	UBE2O, SH3-B domain
SH3-C_UBE2O	PF23044	744 - 784	2.3e-06	UBE2O, ubiquitin binding SH3-C domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16920 AT2G16920
fragaria_vesca	FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490
malus_domestica	MD05G1123200.v1.1 MD10G1126200.v1.1
prunus_persica	Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1
pyrus_communis	pycom05g11760 pycom10g10840
rosa_chinensis	RchiOBHm_Chr6g0278491
rosa_laevigata	RLG00000013224
rosa_multiflora	Rmu_sc0000258.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189850 Rroxscaffold_7G00190340
rosa_rugosa	Rorug06G0117200 Rorug06G0117200
rosa_samantha	Rh6AG226500 Rh6BG230700 Rh6CG233800 Rh6DG225100
rosa_wichuraiana	Rw6G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1279
Acc36I	ACCTGC	2 cut(s)	22, 1279
AccIII	TCCGGA	1 cut(s)	2041
AciI	CCGC	7 cut(s)	4, 122, 693, 1266, 1663, 1811, 2172
AclWI	GGATC	8 cut(s)	14, 1056, 1405, 1654, 1713, 1979, 2743, 2756
AcoI	YGGCCR	1 cut(s)	2335
AcsI	RAATTY	6 cut(s)	1405, 1708, 1835, 2485, 2608, 2620
AcuI	CTGAAG	5 cut(s)	247, 1197, 2097, 2517, 2655
AcyI	GRCGYC	1 cut(s)	1868
AfaI	GTAC	5 cut(s)	12, 711, 1189, 1774, 2446
AfiI	CCNNNNNNNGG	1 cut(s)	962
AflII	CTTAAG	1 cut(s)	2258
AflIII	ACRYGT	1 cut(s)	913
AgeI	ACCGGT	1 cut(s)	1057
AhdI	GACNNNNNGTC	1 cut(s)	476
AjnI	CCWGG	5 cut(s)	351, 699, 956, 1102, 1637
AleI	CACNNNNGTG	1 cut(s)	22
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	3 cut(s)	719, 1677, 2101
AlwI	GGATC	8 cut(s)	14, 1056, 1405, 1654, 1713, 1979, 2743, 2756
AlwNI	CAGNNNCTG	1 cut(s)	539
Ama87I	CYCGRG	1 cut(s)	2664
Aor13HI	TCCGGA	1 cut(s)	2041
AoxI	GGCC	3 cut(s)	1250, 1640, 2335
ApeKI	GCWGC	4 cut(s)	797, 800, 2387, 2552
ApoI	RAATTY	6 cut(s)	1405, 1708, 1835, 2485, 2608, 2620
AseI	ATTAAT	2 cut(s)	747, 1220
AsiGI	ACCGGT	1 cut(s)	1057
AspLEI	GCGC	1 cut(s)	1486
AspS9I	GGNCC	6 cut(s)	683, 946, 953, 1250, 2153, 2312
AsuC2I	CCSGG	2 cut(s)	817, 2531
AsuHPI	GGTGA	9 cut(s)	539, 659, 919, 947, 1352, 1892, 2651, 2663, 2725
AvaI	CYCGRG	1 cut(s)	2664
AvaII	GGWCC	5 cut(s)	683, 946, 953, 2153, 2312
BamHI	GGATCC	1 cut(s)	2748
BarI	GAAGNNNNNNTAC	2 cut(s)	2448, 2480
BbsI	GAAGAC	2 cut(s)	190, 1343
Bbv12I	GWGCWC	1 cut(s)	252
BbvI	GCAGC	4 cut(s)	784, 787, 2374, 2539
BcgI	CGANNNNNNTGC	4 cut(s)	302, 336, 1823, 1857
BciT130I	CCWGG	5 cut(s)	353, 701, 958, 1104, 1639
BciVI	GTATCC	1 cut(s)	2623
BclI	TGATCA	1 cut(s)	1828
BcnI	CCSGG	2 cut(s)	817, 2531
BcoDI	GTCTC	3 cut(s)	719, 1677, 2101
BfrI	CTTAAG	1 cut(s)	2258
BfuAI	ACCTGC	2 cut(s)	22, 1279
BfuI	GTATCC	1 cut(s)	2623
BglII	AGATCT	1 cut(s)	2191
BisI	GCNGC	5 cut(s)	122, 798, 801, 2388, 2553
BlsI	GCNGC	5 cut(s)	123, 799, 802, 2389, 2554
BmcAI	AGTACT	1 cut(s)	711
Bme1390I	CCNGG	7 cut(s)	353, 701, 817, 958, 1104, 1639, 2531
Bme18I	GGWCC	5 cut(s)	683, 946, 953, 2153, 2312
BmeRI	GACNNNNNGTC	1 cut(s)	476
BmeT110I	CYCGRG	1 cut(s)	2664
BmgT120I	GGNCC	6 cut(s)	683, 946, 953, 1250, 2153, 2312
BmiI	GGNNCC	7 cut(s)	280, 685, 955, 1623, 2136, 2528, 2750
BmrFI	CCNGG	7 cut(s)	353, 701, 817, 958, 1104, 1639, 2531
BmrI	ACTGGG	1 cut(s)	513
BmsI	GCATC	6 cut(s)	558, 1876, 2047, 2365, 2374, 2409
BmuI	ACTGGG	1 cut(s)	513
BpiI	GAAGAC	2 cut(s)	190, 1343
BplI	GAGNNNNNCTC	2 cut(s)	205, 237
Bpu10I	CCTNAGC	1 cut(s)	2682
BpuEI	CTTGAG	4 cut(s)	1097, 2051, 2301, 2578
BpuMI	CCSGG	2 cut(s)	817, 2531
Bsa29I	ATCGAT	3 cut(s)	1524, 2695, 2699
BsaHI	GRCGYC	1 cut(s)	1868
BsaJI	CCNNGG	9 cut(s)	282, 930, 949, 956, 1102, 1515, 1932, 2547, 2663
BsaWI	WCCGGW	4 cut(s)	1057, 1822, 1978, 2041
BsaXI	ACNNNNNCTCC	4 cut(s)	478, 508, 1853, 1883
Bsc4I	CCNNNNNNNGG	1 cut(s)	962
Bse118I	RCCGGY	1 cut(s)	1057
Bse1I	ACTGG	9 cut(s)	508, 685, 1567, 1625, 1794, 1967, 2087, 2257, 2580
BseAI	TCCGGA	1 cut(s)	2041
BseBI	CCWGG	5 cut(s)	353, 701, 958, 1104, 1639
BseCI	ATCGAT	3 cut(s)	1524, 2695, 2699
BseDI	CCNNGG	9 cut(s)	282, 930, 949, 956, 1102, 1515, 1932, 2547, 2663
BseLI	CCNNNNNNNGG	1 cut(s)	962
BseMII	CTCAG	4 cut(s)	507, 720, 2696, 2743
BseNI	ACTGG	9 cut(s)	508, 685, 1567, 1625, 1794, 1967, 2087, 2257, 2580
BseRI	GAGGAG	3 cut(s)	194, 1490, 2703
BseXI	GCAGC	4 cut(s)	784, 787, 2374, 2539
BsgI	GTGCAG	3 cut(s)	2085, 2409, 2538
Bsh1285I	CGRYCG	1 cut(s)	2699
BshFI	GGCC	3 cut(s)	1252, 1642, 2337
BshTI	ACCGGT	1 cut(s)	1057
BshVI	ATCGAT	3 cut(s)	1524, 2695, 2699
BsiEI	CGRYCG	1 cut(s)	2699
BsiHKAI	GWGCWC	1 cut(s)	252
BsiHKCI	CYCGRG	1 cut(s)	2664
BsiSI	CCGG	6 cut(s)	816, 1058, 1823, 1979, 2042, 2531
BslFI	GGGAC	3 cut(s)	669, 939, 2420
BslI	CCNNNNNNNGG	1 cut(s)	962
BsmAI	GTCTC	3 cut(s)	719, 1677, 2101
BsmFI	GGGAC	3 cut(s)	669, 939, 2420
BsmI	GAATGC	1 cut(s)	1147
BsnI	GGCC	3 cut(s)	1252, 1642, 2337
BsoBI	CYCGRG	1 cut(s)	2664
Bsp1286I	GDGCHC	1 cut(s)	252
Bsp13I	TCCGGA	1 cut(s)	2041
Bsp19I	CCATGG	1 cut(s)	1515
BspACI	CCGC	7 cut(s)	4, 122, 693, 1266, 1663, 1811, 2172
BspANI	GGCC	3 cut(s)	1252, 1642, 2337
BspCNI	CTCAG	4 cut(s)	508, 721, 2695, 2742
BspDI	ATCGAT	3 cut(s)	1524, 2695, 2699
BspEI	TCCGGA	1 cut(s)	2041
BspHI	TCATGA	2 cut(s)	1417, 1630
BspLI	GGNNCC	7 cut(s)	280, 685, 955, 1623, 2136, 2528, 2750
BspMI	ACCTGC	2 cut(s)	22, 1279
BspPI	GGATC	8 cut(s)	14, 1056, 1405, 1654, 1713, 1979, 2743, 2756
BspQI	GCTCTTC	1 cut(s)	181
BspTI	CTTAAG	1 cut(s)	2258
BsrFI	RCCGGY	1 cut(s)	1057
BsrI	ACTGG	9 cut(s)	508, 685, 1567, 1625, 1794, 1967, 2087, 2257, 2580
BssAI	RCCGGY	1 cut(s)	1057
BssECI	CCNNGG	9 cut(s)	282, 930, 949, 956, 1102, 1515, 1932, 2547, 2663
BssNI	GRCGYC	1 cut(s)	1868
BssT1I	CCWWGG	5 cut(s)	282, 949, 1515, 1932, 2547
Bst2UI	CCWGG	5 cut(s)	353, 701, 958, 1104, 1639
Bst6I	CTCTTC	4 cut(s)	181, 1650, 2445, 2493
BstACI	GRCGYC	1 cut(s)	1868
BstAFI	CTTAAG	1 cut(s)	2258
BstAPI	GCANNNNNTGC	1 cut(s)	2108
BstC8I	GCNNGC	2 cut(s)	1243, 2424
BstDEI	CTNAG	9 cut(s)	516, 729, 1197, 1438, 2125, 2165, 2558, 2682, 2729
BstDSI	CCRYGG	2 cut(s)	930, 1515
BstHHI	GCGC	1 cut(s)	1486
BstMAI	GTCTC	3 cut(s)	719, 1677, 2101
BstMCI	CGRYCG	1 cut(s)	2699
BstMWI	GCNNNNNNNGC	6 cut(s)	1895, 1909, 2035, 2108, 2117, 2384
BstNI	CCWGG	5 cut(s)	353, 701, 958, 1104, 1639
BstNSI	RCATGY	1 cut(s)	1325
BstSCI	CCNGG	7 cut(s)	351, 699, 815, 956, 1102, 1637, 2529
BstV1I	GCAGC	4 cut(s)	784, 787, 2374, 2539
BstV2I	GAAGAC	2 cut(s)	190, 1343
BstX2I	RGATCY	5 cut(s)	1048, 1659, 1984, 2191, 2748
BstYI	RGATCY	5 cut(s)	1048, 1659, 1984, 2191, 2748
Bsu15I	ATCGAT	3 cut(s)	1524, 2695, 2699
BsuI	GTATCC	1 cut(s)	2623
BsuRI	GGCC	3 cut(s)	1252, 1642, 2337
BsuTUI	ATCGAT	3 cut(s)	1524, 2695, 2699
BtgI	CCRYGG	2 cut(s)	930, 1515
BtgZI	GCGATG	1 cut(s)	1634
BtsI	GCAGTG	1 cut(s)	1438
BtsIMutI	CAGTG	4 cut(s)	294, 552, 1371, 1438
BveI	ACCTGC	2 cut(s)	22, 1279
Cac8I	GCNNGC	2 cut(s)	1243, 2424
CaiI	CAGNNNCTG	1 cut(s)	539
CciI	TCATGA	2 cut(s)	1417, 1630
CfoI	GCGC	1 cut(s)	1486
Cfr10I	RCCGGY	1 cut(s)	1057
Cfr13I	GGNCC	6 cut(s)	683, 946, 953, 1250, 2153, 2312
ClaI	ATCGAT	3 cut(s)	1524, 2695, 2699
CseI	GACGC	1 cut(s)	1857
CsiI	ACCWGGT	1 cut(s)	699
Csp6I	GTAC	5 cut(s)	11, 710, 1188, 1773, 2445
CspAI	ACCGGT	1 cut(s)	1057
CviQI	GTAC	5 cut(s)	11, 710, 1188, 1773, 2445
DdeI	CTNAG	9 cut(s)	516, 729, 1197, 1438, 2125, 2165, 2558, 2682, 2729
DraI	TTTAAA	1 cut(s)	304
DriI	GACNNNNNGTC	1 cut(s)	476
EaeI	YGGCCR	1 cut(s)	2335
Eam1104I	CTCTTC	4 cut(s)	181, 1650, 2445, 2493
Eam1105I	GACNNNNNGTC	1 cut(s)	476
EarI	CTCTTC	4 cut(s)	181, 1650, 2445, 2493
Eco130I	CCWWGG	5 cut(s)	282, 949, 1515, 1932, 2547
Eco47I	GGWCC	5 cut(s)	683, 946, 953, 2153, 2312
Eco57I	CTGAAG	5 cut(s)	247, 1197, 2097, 2517, 2655
Eco88I	CYCGRG	1 cut(s)	2664
EcoRII	CCWGG	5 cut(s)	351, 699, 956, 1102, 1637
EcoT14I	CCWWGG	5 cut(s)	282, 949, 1515, 1932, 2547
ErhI	CCWWGG	5 cut(s)	282, 949, 1515, 1932, 2547
FaqI	GGGAC	3 cut(s)	669, 939, 2420
FauI	CCCGC	1 cut(s)	700
FbaI	TGATCA	1 cut(s)	1828
Fnu4HI	GCNGC	5 cut(s)	122, 798, 801, 2388, 2553
Fsp4HI	GCNGC	5 cut(s)	122, 798, 801, 2388, 2553
GlaI	GCGC	1 cut(s)	1485
GluI	GCNGC	5 cut(s)	122, 798, 801, 2388, 2553
HaeIII	GGCC	3 cut(s)	1252, 1642, 2337
HapII	CCGG	6 cut(s)	816, 1058, 1823, 1979, 2042, 2531
HgaI	GACGC	1 cut(s)	1857
HhaI	GCGC	1 cut(s)	1486
Hin1I	GRCGYC	1 cut(s)	1868
Hin6I	GCGC	1 cut(s)	1484
HinP1I	GCGC	1 cut(s)	1484
HincII	GTYRAC	1 cut(s)	735
HindII	GTYRAC	1 cut(s)	735
HindIII	AAGCTT	1 cut(s)	2208
HpaII	CCGG	6 cut(s)	816, 1058, 1823, 1979, 2042, 2531
HphI	GGTGA	9 cut(s)	539, 659, 919, 947, 1352, 1892, 2651, 2663, 2725
Hpy166II	GTNNAC	2 cut(s)	735, 927
Hpy8I	GTNNAC	2 cut(s)	735, 927
Hpy99I	CGWCG	3 cut(s)	197, 593, 596
HpyCH4IV	ACGT	1 cut(s)	913
HpyCH4V	TGCA	7 cut(s)	17, 27, 1087, 1325, 2102, 2426, 2555
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1895, 1909, 2035, 2108, 2117, 2384
HpyF3I	CTNAG	9 cut(s)	516, 729, 1197, 1438, 2125, 2165, 2558, 2682, 2729
HpySE526I	ACGT	1 cut(s)	913
Hsp92I	GRCGYC	1 cut(s)	1868
HspAI	GCGC	1 cut(s)	1484
Kpn2I	TCCGGA	1 cut(s)	2041
Ksp22I	TGATCA	1 cut(s)	1828
LguI	GCTCTTC	1 cut(s)	181
LmnI	GCTCC	4 cut(s)	286, 486, 871, 1621
Lsp1109I	GCAGC	4 cut(s)	784, 787, 2374, 2539
LweI	GCATC	6 cut(s)	558, 1876, 2047, 2365, 2374, 2409
MabI	ACCWGGT	1 cut(s)	699
MaeII	ACGT	1 cut(s)	913
MfeI	CAATTG	1 cut(s)	1334
MflI	RGATCY	5 cut(s)	1048, 1659, 1984, 2191, 2748
MhlI	GDGCHC	1 cut(s)	252
MlyI	GAGTC	3 cut(s)	740, 1787, 2348
MmeI	TCCRAC	2 cut(s)	2221, 2290
MroI	TCCGGA	1 cut(s)	2041
MslI	CAYNNNNRTG	3 cut(s)	22, 642, 2480
MspA1I	CMGCKG	1 cut(s)	695
MspCI	CTTAAG	1 cut(s)	2258
MspI	CCGG	6 cut(s)	816, 1058, 1823, 1979, 2042, 2531
MspR9I	CCNGG	7 cut(s)	353, 701, 817, 958, 1104, 1639, 2531
MunI	CAATTG	1 cut(s)	1334
Mva1269I	GAATGC	1 cut(s)	1147
MvaI	CCWGG	5 cut(s)	353, 701, 958, 1104, 1639
MwoI	GCNNNNNNNGC	6 cut(s)	1895, 1909, 2035, 2108, 2117, 2384
NciI	CCSGG	2 cut(s)	817, 2531
NcoI	CCATGG	1 cut(s)	1515
NlaIV	GGNNCC	7 cut(s)	280, 685, 955, 1623, 2136, 2528, 2750
NmeAIII	GCCGAG	1 cut(s)	2363
NmuCI	GTSAC	4 cut(s)	511, 647, 991, 1433
NspI	RCATGY	1 cut(s)	1325
OliI	CACNNNNGTG	1 cut(s)	22
PagI	TCATGA	2 cut(s)	1417, 1630
PaqCI	CACCTGC	1 cut(s)	1279
PciSI	GCTCTTC	1 cut(s)	181
PcsI	WCGNNNNNNNCGW	1 cut(s)	567
PctI	GAATGC	1 cut(s)	1147
PflFI	GACNNNGTC	1 cut(s)	730
PinAI	ACCGGT	1 cut(s)	1057
PkrI	GCNGC	5 cut(s)	123, 799, 802, 2389, 2554
Ple19I	CGATCG	1 cut(s)	2699
PleI	GAGTC	3 cut(s)	739, 1787, 2348
PpsI	GAGTC	3 cut(s)	739, 1787, 2348
PshBI	ATTAAT	2 cut(s)	747, 1220
Psp6I	CCWGG	5 cut(s)	351, 699, 956, 1102, 1637
PspGI	CCWGG	5 cut(s)	351, 699, 956, 1102, 1637
PspN4I	GGNNCC	7 cut(s)	280, 685, 955, 1623, 2136, 2528, 2750
PspPI	GGNCC	6 cut(s)	683, 946, 953, 1250, 2153, 2312
PstNI	CAGNNNCTG	1 cut(s)	539
PsuI	RGATCY	5 cut(s)	1048, 1659, 1984, 2191, 2748
PsyI	GACNNNGTC	1 cut(s)	730
PvuI	CGATCG	1 cut(s)	2699
RsaI	GTAC	5 cut(s)	12, 711, 1189, 1774, 2446
RsaNI	GTAC	5 cut(s)	11, 710, 1188, 1773, 2445
RseI	CAYNNNNRTG	3 cut(s)	22, 642, 2480
SapI	GCTCTTC	1 cut(s)	181
SatI	GCNGC	5 cut(s)	122, 798, 801, 2388, 2553
Sau96I	GGNCC	6 cut(s)	683, 946, 953, 1250, 2153, 2312
ScaI	AGTACT	1 cut(s)	711
SchI	GAGTC	3 cut(s)	740, 1787, 2348
ScrFI	CCNGG	7 cut(s)	353, 701, 817, 958, 1104, 1639, 2531
SduI	GDGCHC	1 cut(s)	252
SexAI	ACCWGGT	1 cut(s)	699
SfaNI	GCATC	6 cut(s)	558, 1876, 2047, 2365, 2374, 2409
SinI	GGWCC	5 cut(s)	683, 946, 953, 2153, 2312
SmiMI	CAYNNNNRTG	3 cut(s)	22, 642, 2480
SmlI	CTYRAG	5 cut(s)	1076, 2030, 2258, 2316, 2593
SmoI	CTYRAG	5 cut(s)	1076, 2030, 2258, 2316, 2593
SsiI	CCGC	7 cut(s)	4, 122, 693, 1266, 1663, 1811, 2172
SspI	AATATT	1 cut(s)	340
StyD4I	CCNGG	7 cut(s)	351, 699, 815, 956, 1102, 1637, 2529
StyI	CCWWGG	5 cut(s)	282, 949, 1515, 1932, 2547
TaiI	ACGT	1 cut(s)	916
TaqI	TCGA	7 cut(s)	246, 706, 769, 1524, 2226, 2695, 2699
TatI	WGTACW	2 cut(s)	709, 2444
TauI	GCSGC	1 cut(s)	124
TscAI	CASTG	4 cut(s)	301, 559, 1371, 1438
TseFI	GTSAC	4 cut(s)	511, 647, 991, 1433
TseI	GCWGC	4 cut(s)	797, 800, 2387, 2552
Tsp45I	GTSAC	4 cut(s)	511, 647, 991, 1433
TspGWI	ACGGA	5 cut(s)	144, 181, 1374, 1711, 2166
TspRI	CASTG	4 cut(s)	301, 559, 1371, 1438
Tth111I	GACNNNGTC	1 cut(s)	730
Vha464I	CTTAAG	1 cut(s)	2258
VpaK11BI	GGWCC	5 cut(s)	683, 946, 953, 2153, 2312
VspI	ATTAAT	2 cut(s)	747, 1220
XapI	RAATTY	6 cut(s)	1405, 1708, 1835, 2485, 2608, 2620
XbaI	TCTAGA	1 cut(s)	68
XceI	RCATGY	1 cut(s)	1325
ZrmI	AGTACT	1 cut(s)	711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.