pycom05g15800

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
19295901 .. 19299745
3845 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15800.2

Sequence Viewer

Length: 2022 bp
ATGGTGAGCTTAAGAAAGCGCAAACGCATGAGACTGGTTTCCGGGGAAAGTAATGCTTTAGTTCCATTTCCCAGTTTTTGGGACAAAGAAATTGCTCCTCAAGATCCAAACCGCATGCCTTCAAATGATGTCATTCAGCCAGAGAGGATGAAAGAAACCAAGAAACCGAGGATAAAGACTTTTGCTAAGAAAAGCCCAACAAAAAAGAAGAAGGATTATCTGCAATATAGATGCAACATGACGGGCTTTGCAGATGCCATGCAATTGTACAAGCCTACGCTTCAACAACGTCAAGACATCTGCGACGAGTTAGCCAAGACACCGTTTTGGAGTCTACTAAAAATGTACATGGATGACATATTGATCGCCACGGATAGAAAGAAGAAGTCCGGTATGGATTTAATAAAGATCATGCAATGCTACAACTCAAAGGAGCAAAAATTTAAGTTTGGAGATAATGAAGCAAAGGGAATAACGAACGATGATGTTGTTCAGATATTTGGTCTGAACAACAGAGGAGTGGAGCTTCCAAACACGGACAAGTCCACGAAACATGGAAAAGAGGACCCCTTCATTGACAAATACTTTAAGCATGCAAAAGTTGTCAAAAGGAAGCAACTAATAGAAGCCTATGAAAAATCACTCCTGGACCAATCTCCTCAAGGTGCAAAAGATACCGCTTCCATAATCTGTGCTCATCTCATCCAATCACTTCTCTTTGCTAATTCTGGCACGTATATTACCTGGAGTTTCTTAAAGATATGTGGGGAGTTGGATGAGATCAGTAAATATAACTGGGCGAAAGGAGTGAAAGATTACCTCCTCAAGATGATAAACAAAGCACAGAAGAAGAAAAAAAATAGAGGAGAAGAACCAACAATTAGTGGCTGCACCGTCTTTGTTTTGTATTGGATATGTCTTCATACAAATGTGGTTAAGACGGTCAGAGGACGAGAAAACATGATTCCGGCAATTGCAAGATGGGATACAAGTATGATACACAAAGCAATCAAAGATGTCCCAGTTGAACAAATCATGATTGATGGTGTCATTCCTTGTGCTCATCCACAAGAAGAATCTTCGAAGAAAAAACAAGAAAAAACAAGAACGAAGAAAAGAAAGCAAAGTGATGTCATTCCTTATGCTCAACCTGAAGATGATAAATTGGATGACCAGTCCCACCAAAAAGAGGAAGCAAACAAAGATGAGATGGCAGAGGTTGATAAAAATTTGAAGAAGAAAAAGAAGAAACAGAAAAGGAAGCAAAATGATGAAGAACATGAAGGCATCAATATAAATGAAGCTCAAGCACAGTTCGATCAACTGTACAAAGAGGAAATGAGCAAACTCGATGCCATTCATCAGAGATACATCATTGGCATGGATGGAACTTTAAGTGTAGATCTTTTCAATGAATTCAAGAGTGCTAGGAGCATTGATCAGAAAAGGTACCTAACCTTCAAGACGATGATGACATATGCACTGGACTCTTCAAACAAAGAGTGCATAGCACTCAGGGAATCAAATAAAATGCTAAACCATGAAATGAAAAAGATTCTAAGACAAGTGGAGCTTGACAAGAAGAAAATGAATGCACTAAATGCTGATTTATTATCATTGCAGACAAAAAACAGTGCAGCTTCTCTAAAAATCAATGAACAGCTAAATGAGATTGGGGCTTTGAAGAAGAAGTTGGAAGAAAAGGAAGCAAAAATTCCAGGTTTGAATGCTTCTGTACACGAACTTCAGGAAGAGTGGAATCAAACTGCTAGTGATTCCAAAGTTCAATCTCCATGGGGTGATGAAATGATCAAAAAGGCCAACTTTCCAATTCCTCATAGCTTATCAGACGAAATCGCGGAGCTTAAGGCGTCTAAGGGAGCCGAATCAAGGGCCGACTCTAAGGAAATACCTAAAGCGATTTCTCCGGTCAACTCCCAAGCTGCTTCCGAGGATACATCTGCCGAGGGCAAGGTAATCAAGATTGCATATCGCCTCATAGAAATATGTAAATCAGATTAA

Protein Analysis

674

Amino Acids

77.2

Weight (kDa)

9.21

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1449
AccB1I GGYRCC 1 cut(s) 1449
AccB7I CCANNNNNTGG 1 cut(s) 78
AccI GTMKAC 1 cut(s) 334
AccII CGCG 1 cut(s) 1859
AciI CCGC 3 cut(s) 112, 678, 1859
AclWI GGATC 1 cut(s) 98
AcsI RAATTY 4 cut(s) 440, 1228, 1415, 1713
AcuI CTGAAG 2 cut(s) 1173, 1730
AcyI GRCGYC 1 cut(s) 1871
AfaI GTAC 5 cut(s) 269, 347, 1328, 1451, 1737
AfiI CCNNNNNNNGG 3 cut(s) 78, 1189, 1890
AflII CTTAAG 2 cut(s) 10, 1865
AjnI CCWGG 3 cut(s) 645, 743, 1717
AjuI GAANNNNNNNTTGG 2 cut(s) 1676, 1708
AluBI AGCT 9 cut(s) 9, 526, 1304, 1573, 1640, 1663, 1842, 1864, 1943
AluI AGCT 9 cut(s) 9, 526, 1304, 1573, 1640, 1663, 1842, 1864, 1943
Alw21I GWGCWC 2 cut(s) 697, 1063
Alw26I GTCTC 1 cut(s) 25
AlwI GGATC 1 cut(s) 98
AoxI GGCC 2 cut(s) 1818, 1893
ApeKI GCWGC 3 cut(s) 888, 1637, 1943
ApoI RAATTY 4 cut(s) 440, 1228, 1415, 1713
Asp718I GGTACC 1 cut(s) 1449
AspLEI GCGC 1 cut(s) 21
AspS9I GGNCC 3 cut(s) 565, 649, 1893
AsuC2I CCSGG 1 cut(s) 43
AsuHPI GGTGA 2 cut(s) 16, 1811
AsuII TTCGAA 1 cut(s) 1082
AvaII GGWCC 2 cut(s) 565, 649
BanI GGYRCC 1 cut(s) 1449
BarI GAAGNNNNNNTAC 4 cut(s) 1442, 1474, 1728, 1760
BbsI GAAGAC 1 cut(s) 911
Bbv12I GWGCWC 2 cut(s) 697, 1063
BbvI GCAGC 3 cut(s) 875, 1649, 1930
BccI CCATC 4 cut(s) 975, 1037, 1204, 1379
BciT130I CCWGG 3 cut(s) 647, 745, 1719
BciVI GTATCC 2 cut(s) 979, 1948
BclI TGATCA 2 cut(s) 1438, 1809
BcnI CCSGG 1 cut(s) 43
BcoDI GTCTC 1 cut(s) 25
BfaI CTAG 2 cut(s) 1428, 1770
BfrI CTTAAG 2 cut(s) 10, 1865
BfuI GTATCC 2 cut(s) 979, 1948
BglII AGATCT 1 cut(s) 1402
BisI GCNGC 3 cut(s) 889, 1638, 1944
BlsI GCNGC 3 cut(s) 890, 1639, 1945
Bme1390I CCNGG 4 cut(s) 43, 647, 745, 1719
Bme18I GGWCC 2 cut(s) 565, 649
BmgT120I GGNCC 3 cut(s) 565, 649, 1893
BmiI GGNNCC 3 cut(s) 567, 1451, 1882
BmrFI CCNGG 4 cut(s) 43, 647, 745, 1719
BmrI ACTGGG 3 cut(s) 66, 805, 1016
BmsI GCATC 4 cut(s) 221, 244, 1296, 1342
BmuI ACTGGG 3 cut(s) 66, 805, 1016
BpiI GAAGAC 1 cut(s) 911
BpmI CTGGAG 1 cut(s) 766
Bpu14I TTCGAA 1 cut(s) 1082
BpuEI CTTGAG 4 cut(s) 84, 645, 809, 1290
BpuMI CCSGG 1 cut(s) 43
BsaAI YACGTR 1 cut(s) 735
BsaHI GRCGYC 1 cut(s) 1871
BsaJI CCNNGG 6 cut(s) 42, 167, 369, 1793, 1950, 1965
BsaWI WCCGGW 2 cut(s) 389, 1927
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 1189, 1890
Bse1I ACTGG 6 cut(s) 39, 72, 800, 1022, 1174, 1488
Bse3DI GCAATG 2 cut(s) 422, 1616
BseBI CCWGG 3 cut(s) 647, 745, 1719
BseDI CCNNGG 6 cut(s) 42, 167, 369, 1793, 1950, 1965
BseGI GGATG 7 cut(s) 153, 358, 702, 781, 1063, 1174, 1390
BseLI CCNNNNNNNGG 3 cut(s) 78, 1189, 1890
BseMI GCAATG 2 cut(s) 422, 1616
BseMII CTCAG 1 cut(s) 1528
BseNI ACTGG 6 cut(s) 39, 72, 800, 1022, 1174, 1488
BseRI GAGGAG 5 cut(s) 87, 531, 648, 812, 879
BseXI GCAGC 3 cut(s) 875, 1649, 1930
BsgI GTGCAG 2 cut(s) 874, 1656
Bsh1236I CGCG 1 cut(s) 1859
BshFI GGCC 2 cut(s) 1820, 1895
BshNI GGYRCC 1 cut(s) 1449
BsiHKAI GWGCWC 2 cut(s) 697, 1063
BsiSI CCGG 4 cut(s) 42, 390, 968, 1928
BslFI GGGAC 3 cut(s) 95, 1004, 1162
BslI CCNNNNNNNGG 3 cut(s) 78, 1189, 1890
BsmAI GTCTC 1 cut(s) 25
BsmFI GGGAC 3 cut(s) 95, 1004, 1162
BsmI GAATGC 2 cut(s) 1597, 1732
BsnI GGCC 2 cut(s) 1820, 1895
Bsp119I TTCGAA 1 cut(s) 1082
Bsp1286I GDGCHC 2 cut(s) 697, 1063
Bsp1407I TGTACA 4 cut(s) 267, 345, 1326, 1735
Bsp143I GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
Bsp19I CCATGG 1 cut(s) 1793
BspACI CCGC 3 cut(s) 112, 678, 1859
BspANI GGCC 2 cut(s) 1820, 1895
BspCNI CTCAG 1 cut(s) 1527
BspFNI CGCG 1 cut(s) 1859
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 3 cut(s) 567, 1451, 1882
BspPI GGATC 1 cut(s) 98
BspT104I TTCGAA 1 cut(s) 1082
BspT107I GGYRCC 1 cut(s) 1449
BspTI CTTAAG 2 cut(s) 10, 1865
BsrDI GCAATG 2 cut(s) 422, 1616
BsrGI TGTACA 4 cut(s) 267, 345, 1326, 1735
BsrI ACTGG 6 cut(s) 39, 72, 800, 1022, 1174, 1488
BssECI CCNNGG 6 cut(s) 42, 167, 369, 1793, 1950, 1965
BssMI GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
BssNI GRCGYC 1 cut(s) 1871
BssT1I CCWWGG 1 cut(s) 1793
Bst2UI CCWGG 3 cut(s) 647, 745, 1719
Bst4CI ACNGT 6 cut(s) 324, 895, 943, 1314, 1326, 1634
Bst6I CTCTTC 2 cut(s) 1495, 1746
BstACI GRCGYC 1 cut(s) 1871
BstAFI CTTAAG 2 cut(s) 10, 1865
BstAPI GCANNNNNTGC 1 cut(s) 1601
BstAUI TGTACA 4 cut(s) 267, 345, 1326, 1735
BstBAI YACGTR 1 cut(s) 735
BstBI TTCGAA 1 cut(s) 1082
BstC8I GCNNGC 2 cut(s) 116, 594
BstDEI CTNAG 5 cut(s) 186, 1514, 1559, 1875, 1902
BstDSI CCRYGG 2 cut(s) 369, 1793
BstF5I GGATG 7 cut(s) 153, 358, 702, 781, 1063, 1174, 1390
BstFNI CGCG 1 cut(s) 1859
BstHHI GCGC 1 cut(s) 21
BstKTI GATC 8 cut(s) 106, 366, 411, 783, 1321, 1405, 1441, 1812
BstMAI GTCTC 1 cut(s) 25
BstMBI GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
BstMWI GCNNNNNNNGC 1 cut(s) 1601
BstNI CCWGG 3 cut(s) 647, 745, 1719
BstNSI RCATGY 2 cut(s) 118, 596
BstSCI CCNGG 4 cut(s) 41, 645, 743, 1717
BstUI CGCG 1 cut(s) 1859
BstV1I GCAGC 3 cut(s) 875, 1649, 1930
BstV2I GAAGAC 1 cut(s) 911
BstX2I RGATCY 2 cut(s) 103, 1402
BstYI RGATCY 2 cut(s) 103, 1402
BsuI GTATCC 2 cut(s) 979, 1948
BsuRI GGCC 2 cut(s) 1820, 1895
BtgI CCRYGG 2 cut(s) 369, 1793
BtsCI GGATG 7 cut(s) 153, 358, 702, 781, 1063, 1174, 1390
BtsIMutI CAGTG 2 cut(s) 1481, 1639
Cac8I GCNNGC 2 cut(s) 116, 594
CciI TCATGA 1 cut(s) 1035
CfoI GCGC 1 cut(s) 21
Cfr13I GGNCC 3 cut(s) 565, 649, 1893
CseI GACGC 1 cut(s) 1860
Csp6I GTAC 5 cut(s) 268, 346, 1327, 1450, 1736
CviQI GTAC 5 cut(s) 268, 346, 1327, 1450, 1736
DdeI CTNAG 5 cut(s) 186, 1514, 1559, 1875, 1902
DpnI GATC 8 cut(s) 105, 365, 410, 782, 1320, 1404, 1440, 1811
DpnII GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
Eam1104I CTCTTC 2 cut(s) 1495, 1746
EarI CTCTTC 2 cut(s) 1495, 1746
Eco130I CCWWGG 1 cut(s) 1793
Eco47I GGWCC 2 cut(s) 565, 649
Eco57I CTGAAG 2 cut(s) 1173, 1730
EcoO109I RGGNCCY 1 cut(s) 565
EcoRI GAATTC 1 cut(s) 1415
EcoRII CCWGG 3 cut(s) 645, 743, 1717
EcoT14I CCWWGG 1 cut(s) 1793
ErhI CCWWGG 1 cut(s) 1793
FalI AAGNNNNNCTT 6 cut(s) 40, 72, 1557, 1589, 1808, 1840
FaqI GGGAC 3 cut(s) 95, 1004, 1162
FauNDI CATATG 1 cut(s) 1477
FbaI TGATCA 2 cut(s) 1438, 1809
FblI GTMKAC 1 cut(s) 334
Fnu4HI GCNGC 3 cut(s) 889, 1638, 1944
FokI GGATG 7 cut(s) 160, 365, 689, 788, 1050, 1181, 1397
Fsp4HI GCNGC 3 cut(s) 889, 1638, 1944
FspBI CTAG 2 cut(s) 1428, 1770
GlaI GCGC 1 cut(s) 20
GluI GCNGC 3 cut(s) 889, 1638, 1944
GsuI CTGGAG 1 cut(s) 766
HaeIII GGCC 2 cut(s) 1820, 1895
HapII CCGG 4 cut(s) 42, 390, 968, 1928
HgaI GACGC 1 cut(s) 1860
HhaI GCGC 1 cut(s) 21
Hin1I GRCGYC 1 cut(s) 1871
Hin6I GCGC 1 cut(s) 19
HinP1I GCGC 1 cut(s) 19
HincII GTYRAC 1 cut(s) 1933
HindII GTYRAC 1 cut(s) 1933
HpaII CCGG 4 cut(s) 42, 390, 968, 1928
HphI GGTGA 2 cut(s) 16, 1811
Hpy166II GTNNAC 4 cut(s) 335, 546, 1738, 1933
Hpy188I TCNGA 8 cut(s) 495, 507, 947, 1365, 1443, 1849, 1951, 2017
Hpy188III TCNNGA 8 cut(s) 101, 293, 826, 1036, 1420, 1462, 1748, 1981
Hpy8I GTNNAC 4 cut(s) 335, 546, 1738, 1933
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 5 cut(s) 129, 205, 580, 1277, 1468
HpyCH4III ACNGT 6 cut(s) 324, 895, 943, 1314, 1326, 1634
HpyCH4IV ACGT 2 cut(s) 289, 734
HpyF10VI GCNNNNNNNGC 1 cut(s) 1601
HpyF3I CTNAG 5 cut(s) 186, 1514, 1559, 1875, 1902
HpySE526I ACGT 2 cut(s) 289, 734
Hsp92I GRCGYC 1 cut(s) 1871
HspAI GCGC 1 cut(s) 19
KpnI GGTACC 1 cut(s) 1453
Ksp22I TGATCA 2 cut(s) 1438, 1809
Kzo9I GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
LmnI GCTCC 7 cut(s) 100, 433, 523, 1431, 1570, 1861, 1880
Lsp1109I GCAGC 3 cut(s) 875, 1649, 1930
LweI GCATC 4 cut(s) 221, 244, 1296, 1342
MaeI CTAG 2 cut(s) 1428, 1770
MaeII ACGT 2 cut(s) 289, 734
MalI GATC 8 cut(s) 105, 365, 410, 782, 1320, 1404, 1440, 1811
MboI GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
MfeI CAATTG 2 cut(s) 263, 972
MflI RGATCY 2 cut(s) 103, 1402
MhlI GDGCHC 2 cut(s) 697, 1063
MlyI GAGTC 3 cut(s) 340, 1481, 1892
MmeI TCCRAC 2 cut(s) 753, 1674
MseI TTAA 9 cut(s) 11, 401, 444, 588, 755, 936, 1394, 1866, 2020
MslI CAYNNNNRTG 2 cut(s) 927, 1379
MspCI CTTAAG 2 cut(s) 10, 1865
MspI CCGG 4 cut(s) 42, 390, 968, 1928
MspR9I CCNGG 4 cut(s) 43, 647, 745, 1719
MunI CAATTG 2 cut(s) 263, 972
Mva1269I GAATGC 2 cut(s) 1597, 1732
MvaI CCWGG 3 cut(s) 647, 745, 1719
MvnI CGCG 1 cut(s) 1859
MwoI GCNNNNNNNGC 1 cut(s) 1601
NciI CCSGG 1 cut(s) 43
NcoI CCATGG 1 cut(s) 1793
NdeI CATATG 1 cut(s) 1477
NdeII GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
NlaIV GGNNCC 3 cut(s) 567, 1451, 1882
NmeAIII GCCGAG 1 cut(s) 1990
NspI RCATGY 2 cut(s) 118, 596
NspV TTCGAA 1 cut(s) 1082
PaeI GCATGC 2 cut(s) 118, 596
PagI TCATGA 1 cut(s) 1035
PctI GAATGC 2 cut(s) 1597, 1732
PfeI GAWTC 7 cut(s) 964, 1076, 1520, 1555, 1759, 1775, 1886
PflMI CCANNNNNTGG 1 cut(s) 78
PfoI TCCNGGA 1 cut(s) 645
PkrI GCNGC 3 cut(s) 890, 1639, 1945
PleI GAGTC 3 cut(s) 339, 1481, 1892
PpsI GAGTC 3 cut(s) 339, 1481, 1892
Ppu21I YACGTR 1 cut(s) 735
PpuMI RGGWCCY 1 cut(s) 565
Psp5II RGGWCCY 1 cut(s) 565
Psp6I CCWGG 3 cut(s) 645, 743, 1717
PspGI CCWGG 3 cut(s) 645, 743, 1717
PspN4I GGNNCC 3 cut(s) 567, 1451, 1882
PspPI GGNCC 3 cut(s) 565, 649, 1893
PspPPI RGGWCCY 1 cut(s) 565
PsuI RGATCY 2 cut(s) 103, 1402
RsaI GTAC 5 cut(s) 269, 347, 1328, 1451, 1737
RsaNI GTAC 5 cut(s) 268, 346, 1327, 1450, 1736
RseI CAYNNNNRTG 2 cut(s) 927, 1379
SaqAI TTAA 9 cut(s) 11, 401, 444, 588, 755, 936, 1394, 1866, 2020
SatI GCNGC 3 cut(s) 889, 1638, 1944
Sau3AI GATC 8 cut(s) 103, 363, 408, 780, 1318, 1402, 1438, 1809
Sau96I GGNCC 3 cut(s) 565, 649, 1893
SchI GAGTC 3 cut(s) 340, 1481, 1892
ScrFI CCNGG 4 cut(s) 43, 647, 745, 1719
SduI GDGCHC 2 cut(s) 697, 1063
SfaNI GCATC 4 cut(s) 221, 244, 1296, 1342
SfuI TTCGAA 1 cut(s) 1082
SinI GGWCC 2 cut(s) 565, 649
SmiMI CAYNNNNRTG 2 cut(s) 927, 1379
SmlI CTYRAG 6 cut(s) 10, 99, 660, 824, 1305, 1865
SmoI CTYRAG 6 cut(s) 10, 99, 660, 824, 1305, 1865
SphI GCATGC 2 cut(s) 118, 596
SsiI CCGC 3 cut(s) 112, 678, 1859
SspMI CTAG 2 cut(s) 1428, 1770
StyD4I CCNGG 4 cut(s) 41, 645, 743, 1717
StyI CCWWGG 1 cut(s) 1793
TaaI ACNGT 6 cut(s) 324, 895, 943, 1314, 1326, 1634
TaiI ACGT 2 cut(s) 292, 737
TaqI TCGA 3 cut(s) 1082, 1317, 1350
TatI WGTACW 4 cut(s) 267, 345, 1326, 1735
TfiI GAWTC 7 cut(s) 964, 1076, 1520, 1555, 1759, 1775, 1886
Tru1I TTAA 9 cut(s) 11, 401, 444, 588, 755, 936, 1394, 1866, 2020
Tru9I TTAA 9 cut(s) 11, 401, 444, 588, 755, 936, 1394, 1866, 2020
TscAI CASTG 2 cut(s) 1488, 1639
TseI GCWGC 3 cut(s) 888, 1637, 1943
TspGWI ACGGA 2 cut(s) 386, 551
TspRI CASTG 2 cut(s) 1488, 1639
Van91I CCANNNNNTGG 1 cut(s) 78
Vha464I CTTAAG 2 cut(s) 10, 1865
VpaK11BI GGWCC 2 cut(s) 565, 649
XapI RAATTY 4 cut(s) 440, 1228, 1415, 1713
XceI RCATGY 2 cut(s) 118, 596
XmiI GTMKAC 1 cut(s) 334
XspI CTAG 2 cut(s) 1428, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.