pycom16g22770

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
23100574 .. 23101043
470 bp
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UTR
Exon/CDS
Intron
pycom16g22770.1

Sequence Viewer

Length: 351 bp
ATGGAGATAGAAAAAGACAAGAGTGATCAGGAGCATAGTTACCAAACATTGAAGAGAGTCTTACAAGATAATGTGGATAAAGTTAGAAAGGTCTTCATACTGATCAAGCATTACTTCCACTTTAGCTTGGTAGTTTGGGACATTAAAGATGAAAAAAAGACACACTATAATTCCAAATTACCAAGGATACATGGTAGTACAGACCAATACTTTGATCATGTTGTGCAAGTGAGAGACAAAATAGAAGCAATCTACAAAGATTTCAAAGGTGATAGCAAAAACATAAATATATGGAAACATTTTTCCAGCATCCATTGCAGTTACAAAAACATAAAGAGTGCCATAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

117

Amino Acids

13.97

Weight (kDa)

9.23

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 199
AgsI TTSAA 2 cut(s) 52, 265
AluBI AGCT 1 cut(s) 126
AluI AGCT 1 cut(s) 126
Alw26I GTCTC 1 cut(s) 228
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AsuHPI GGTGA 1 cut(s) 281
BbsI GAAGAC 1 cut(s) 85
BciVI GTATCC 1 cut(s) 180
BclI TGATCA 3 cut(s) 25, 102, 214
BcoDI GTCTC 1 cut(s) 228
BfaI CTAG 1 cut(s) 349
BfuI GTATCC 1 cut(s) 180
BmsI GCATC 1 cut(s) 318
BpiI GAAGAC 1 cut(s) 85
BsaJI CCNNGG 1 cut(s) 182
Bse3DI GCAATG 1 cut(s) 313
BseDI CCNNGG 1 cut(s) 182
BseGI GGATG 1 cut(s) 309
BseMI GCAATG 1 cut(s) 313
BslFI GGGAC 1 cut(s) 152
BsmAI GTCTC 1 cut(s) 228
BsmFI GGGAC 1 cut(s) 152
Bsp143I GATC 3 cut(s) 25, 102, 214
BsrDI GCAATG 1 cut(s) 313
BssECI CCNNGG 1 cut(s) 182
BssMI GATC 3 cut(s) 25, 102, 214
BssT1I CCWWGG 1 cut(s) 182
Bst6I CTCTTC 1 cut(s) 47
BstAPI GCANNNNNTGC 1 cut(s) 315
BstF5I GGATG 1 cut(s) 309
BstKTI GATC 3 cut(s) 28, 105, 217
BstMAI GTCTC 1 cut(s) 228
BstMBI GATC 3 cut(s) 25, 102, 214
BstMWI GCNNNNNNNGC 1 cut(s) 315
BstV2I GAAGAC 1 cut(s) 85
BsuI GTATCC 1 cut(s) 180
BtsCI GGATG 1 cut(s) 309
Csp6I GTAC 1 cut(s) 198
CviAII CATG 2 cut(s) 191, 218
CviJI RGCY 1 cut(s) 126
CviKI_1 RGCY 1 cut(s) 126
CviQI GTAC 1 cut(s) 198
DpnI GATC 3 cut(s) 27, 104, 216
DpnII GATC 3 cut(s) 25, 102, 214
Eam1104I CTCTTC 1 cut(s) 47
EarI CTCTTC 1 cut(s) 47
Eco130I CCWWGG 1 cut(s) 182
EcoT14I CCWWGG 1 cut(s) 182
ErhI CCWWGG 1 cut(s) 182
FaeI CATG 2 cut(s) 194, 221
FalI AAGNNNNNCTT 4 cut(s) 44, 76, 98, 130
FaqI GGGAC 1 cut(s) 152
FatI CATG 2 cut(s) 190, 217
FbaI TGATCA 3 cut(s) 25, 102, 214
FokI GGATG 1 cut(s) 296
FspBI CTAG 1 cut(s) 349
Hin1II CATG 2 cut(s) 194, 221
HinfI GANTC 1 cut(s) 57
HphI GGTGA 1 cut(s) 281
Hpy188III TCNNGA 1 cut(s) 29
HpyCH4V TGCA 2 cut(s) 226, 318
HpyF10VI GCNNNNNNNGC 1 cut(s) 315
Hsp92II CATG 2 cut(s) 194, 221
Ksp22I TGATCA 3 cut(s) 25, 102, 214
Kzo9I GATC 3 cut(s) 25, 102, 214
LmnI GCTCC 1 cut(s) 31
LpnPI CCDG 2 cut(s) 14, 319
LweI GCATC 1 cut(s) 318
MaeI CTAG 1 cut(s) 349
MaeIII GTNAC 2 cut(s) 38, 320
MalI GATC 3 cut(s) 27, 104, 216
MboI GATC 3 cut(s) 25, 102, 214
MboII GAAGA 2 cut(s) 64, 85
MluCI AATT 2 cut(s) 169, 176
MlyI GAGTC 1 cut(s) 66
MseI TTAA 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 315
NdeII GATC 3 cut(s) 25, 102, 214
NlaIII CATG 2 cut(s) 194, 221
PleI GAGTC 1 cut(s) 65
PpsI GAGTC 1 cut(s) 65
RsaI GTAC 1 cut(s) 199
RsaNI GTAC 1 cut(s) 198
SaqAI TTAA 1 cut(s) 144
Sau3AI GATC 3 cut(s) 25, 102, 214
SchI GAGTC 1 cut(s) 66
SetI ASST 3 cut(s) 93, 128, 271
SfaNI GCATC 1 cut(s) 318
Sse9I AATT 2 cut(s) 169, 176
SspMI CTAG 1 cut(s) 349
StyI CCWWGG 1 cut(s) 182
TasI AATT 2 cut(s) 169, 176
TatI WGTACW 1 cut(s) 197
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TspDTI ATGAA 2 cut(s) 85, 165
XspI CTAG 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.