pycom05g22280
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
24681452 .. 24684680
3229 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g22280.5

Sequence Viewer

Length: 1287 bp
ATGAAAGCTTTGAGAGTTCTGAGAACCCTCTCTTCAAAACCCAGCAAAACCCCATTAAACCCAGTCTCCTTCTTCCACCGGTTTTACGCAGCTCAGCCGCAAGAGGACGATTCTGGCCACAACCCATCTTTCTCAGACTCCGAAAATGGTTCAGACTCGGTTTTCGACAGTACCCATTACGCCATACCATCCATTGGTTCGGATTCTAAGCCCGAAACCCCTAGGAAGCCGACTTGGGACAACAAGTACCGATCAAAAGCTGATAAATTGATTGGGGTGGACACCCAGAAGGAAAAATTGAGGCGTTTGGAGGAAGAGGAGGAGCAAAAGAGCAGAGTGCTCGCTAAGGCGCTTCTCGAGGCGGCTCTGGAGCGCGCAGATGATGAGGAATCAGGGGAGGAGGAGGAGGAAATGGTGAAGGAAGAGGACCAAAAGGCGCTGTCTGTTGGGATAATTGGTGCCCCGAATGCCGGAAAGTCTGCTCTGACTAATTACATGGTTGGCACAAAGGTTTCTGCTGTTTCACGGAAGACAAACACCACTACTCATGAAGTATTAGGAGTTATGACAAAAGGAGACACACAAATTTGTTTCTTTGATACTCCAGGTCTTACATTAAGCAACAAGGGATGTCCTTATAAGGATTTTAAGGTTCGAGTAGAAAGTGCTTGGAGCTCGGTTACTTTATACGATGTGCTCATAGTTATTTTCGACGTCCATAGGCATCTTACCAGGCCTGATGTAAGGGTTATAGGATTGATCAAGCGTATGGGAGCACTACCACACCCGGTACAAAAGAGAATTTTGTGTATGAACAAGGTTGATTTGGTTGAGAAGAAGAAAGACTTGTTAAAGGTTGCTGAGGAATTCAAAGATCTTCCTGGTTATGAAAGGCATTTCATGATTTCTGGTCTGAAGGGCTCCGGAGTGAAAGATCTTACTCAATATTTGATCGATCAGGCTGTTAAACGATCTTGGGATGAAGATCCATTGATCATGACTGAGGAAGTTATGAAGAATATATCATTAGAAGTTGTCCGAGAAAGATTGTTAGACCATGTGCATCAGGAAATCCCATACACTATTGAACACCGGTTGATGGACTGGAAGGAGTTGCGAGATGGCTCTCTTCGGATTGAACAGCATCTTATCACGAACAAATTAAGTCAACGCAAATCGATCCTTGTAGGAAAGAAGGGCAATAAAATAGGGAGAATTGGCATGGAAGCTAATGAGGAGCTACGGTCCATCTTCAAGAGGGATCTATCATCTCATTCTCCAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

48.51

Weight (kDa)

7.23

Isoelectric Point (pI)

46.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 639
AatII GACGTC 1 cut(s) 717
AccB1I GGYRCC 1 cut(s) 458
AccB7I CCANNNNNTGG 1 cut(s) 194
AccII CGCG 1 cut(s) 375
AccIII TCCGGA 1 cut(s) 923
AciI CCGC 2 cut(s) 98, 362
AclWI GGATC 3 cut(s) 980, 1174, 1269
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 3 cut(s) 585, 801, 866
AcuI CTGAAG 1 cut(s) 935
AcyI GRCGYC 1 cut(s) 714
AfaI GTAC 3 cut(s) 172, 248, 792
AfiI CCNNNNNNNGG 3 cut(s) 194, 470, 1099
AgeI ACCGGT 2 cut(s) 78, 1092
AgsI TTSAA 5 cut(s) 36, 871, 1088, 1139, 1255
AjnI CCWGG 4 cut(s) 604, 731, 880, 1279
AluBI AGCT 6 cut(s) 8, 92, 260, 675, 1229, 1240
AluI AGCT 6 cut(s) 8, 92, 260, 675, 1229, 1240
Alw21I GWGCWC 4 cut(s) 342, 677, 699, 778
Alw26I GTCTC 2 cut(s) 70, 570
AlwI GGATC 3 cut(s) 980, 1174, 1269
Ama87I CYCGRG 1 cut(s) 356
Aor13HI TCCGGA 1 cut(s) 923
AoxI GGCC 2 cut(s) 115, 734
ApeKI GCWGC 1 cut(s) 89
ApoI RAATTY 3 cut(s) 585, 801, 866
ArsI GACNNNNNNTTYG 2 cut(s) 146, 178
AsiGI ACCGGT 2 cut(s) 78, 1092
AspA2I CCTAGG 1 cut(s) 221
AspLEI GCGC 4 cut(s) 352, 375, 377, 439
AspS9I GGNCC 2 cut(s) 427, 1245
AsuC2I CCSGG 1 cut(s) 788
AsuHPI GGTGA 1 cut(s) 427
AvaI CYCGRG 1 cut(s) 356
AvaII GGWCC 2 cut(s) 427, 1245
AvrII CCTAGG 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 463
BalI TGGCCA 1 cut(s) 117
BanI GGYRCC 1 cut(s) 458
BanII GRGCYC 2 cut(s) 677, 923
BbsI GAAGAC 1 cut(s) 536
Bbv12I GWGCWC 4 cut(s) 342, 677, 699, 778
BbvCI CCTCAGC 1 cut(s) 861
BbvI GCAGC 1 cut(s) 101
BccI CCATC 5 cut(s) 133, 196, 1093, 1115, 1256
BcgI CGANNNNNNTGC 2 cut(s) 322, 356
BciT130I CCWGG 4 cut(s) 606, 733, 882, 1281
BclI TGATCA 2 cut(s) 759, 993
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 2 cut(s) 70, 570
BfaI CTAG 1 cut(s) 222
BfoI RGCGCY 2 cut(s) 353, 440
BglII AGATCT 2 cut(s) 874, 934
BisI GCNGC 3 cut(s) 90, 98, 363
BlnI CCTAGG 1 cut(s) 221
BlpI GCTNAGC 1 cut(s) 93
BlsI GCNGC 3 cut(s) 91, 99, 364
Bme1390I CCNGG 5 cut(s) 606, 733, 788, 882, 1281
Bme18I GGWCC 2 cut(s) 427, 1245
BmeT110I CYCGRG 1 cut(s) 356
BmgT120I GGNCC 2 cut(s) 427, 1245
BmiI GGNNCC 2 cut(s) 460, 922
BmrFI CCNGG 5 cut(s) 606, 733, 788, 882, 1281
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 3 cut(s) 733, 1072, 1153
BmuI ACTGGG 1 cut(s) 56
BpiI GAAGAC 1 cut(s) 536
BpmI CTGGAG 3 cut(s) 389, 588, 1263
Bpu10I CCTNAGC 2 cut(s) 345, 861
Bpu1102I GCTNAGC 1 cut(s) 93
BpuMI CCSGG 1 cut(s) 788
Bsa29I ATCGAT 2 cut(s) 954, 1178
BsaBI GATNNNNATC 1 cut(s) 984
BsaHI GRCGYC 1 cut(s) 714
BsaJI CCNNGG 1 cut(s) 221
BsaWI WCCGGW 3 cut(s) 78, 923, 1092
BsaXI ACNNNNNCTCC 4 cut(s) 50, 80, 1229, 1259
Bsc4I CCNNNNNNNGG 3 cut(s) 194, 470, 1099
Bse118I RCCGGY 2 cut(s) 78, 1092
Bse1I ACTGG 2 cut(s) 62, 1109
Bse8I GATNNNNATC 1 cut(s) 984
BseAI TCCGGA 1 cut(s) 923
BseBI CCWGG 4 cut(s) 606, 733, 882, 1281
BseCI ATCGAT 2 cut(s) 954, 1178
BseDI CCNNGG 1 cut(s) 221
BseGI GGATG 3 cut(s) 188, 635, 985
BseJI GATNNNNATC 1 cut(s) 984
BseLI CCNNNNNNNGG 3 cut(s) 194, 470, 1099
BseMII CTCAG 5 cut(s) 11, 107, 147, 852, 993
BseNI ACTGG 2 cut(s) 62, 1109
BsePI GCGCGC 1 cut(s) 373
BseRI GAGGAG 6 cut(s) 332, 335, 413, 416, 419, 1250
BseSI GKGCMC 1 cut(s) 463
BseXI GCAGC 1 cut(s) 101
BseYI CCCAGC 1 cut(s) 41
Bsh1236I CGCG 1 cut(s) 375
BshFI GGCC 2 cut(s) 117, 736
BshNI GGYRCC 1 cut(s) 458
BshTI ACCGGT 2 cut(s) 78, 1092
BshVI ATCGAT 2 cut(s) 954, 1178
BsiHKAI GWGCWC 4 cut(s) 342, 677, 699, 778
BsiHKCI CYCGRG 1 cut(s) 356
BsiSI CCGG 5 cut(s) 79, 471, 788, 924, 1093
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 3 cut(s) 194, 470, 1099
BsmAI GTCTC 2 cut(s) 70, 570
BsmFI GGGAC 1 cut(s) 251
BsmI GAATGC 1 cut(s) 472
BsnI GGCC 2 cut(s) 117, 736
BsoBI CYCGRG 1 cut(s) 356
Bsp1286I GDGCHC 6 cut(s) 342, 463, 677, 699, 778, 923
Bsp13I TCCGGA 1 cut(s) 923
Bsp1720I GCTNAGC 1 cut(s) 93
BspACI CCGC 2 cut(s) 98, 362
BspANI GGCC 2 cut(s) 117, 736
BspCNI CTCAG 5 cut(s) 12, 106, 146, 853, 994
BspDI ATCGAT 2 cut(s) 954, 1178
BspEI TCCGGA 1 cut(s) 923
BspFNI CGCG 1 cut(s) 375
BspHI TCATGA 3 cut(s) 547, 900, 996
BspLI GGNNCC 2 cut(s) 460, 922
BspPI GGATC 3 cut(s) 980, 1174, 1269
BspT107I GGYRCC 1 cut(s) 458
BsrFI RCCGGY 2 cut(s) 78, 1092
BsrI ACTGG 2 cut(s) 62, 1109
BssAI RCCGGY 2 cut(s) 78, 1092
BssECI CCNNGG 1 cut(s) 221
BssHII GCGCGC 1 cut(s) 373
BssNI GRCGYC 1 cut(s) 714
BssT1I CCWWGG 1 cut(s) 221
Bst2UI CCWGG 4 cut(s) 606, 733, 882, 1281
Bst4CI ACNGT 2 cut(s) 170, 1245
Bst6I CTCTTC 4 cut(s) 37, 309, 417, 1134
BstACI GRCGYC 1 cut(s) 714
BstC8I GCNNGC 2 cut(s) 342, 375
BstDEI CTNAG 7 cut(s) 20, 93, 133, 207, 345, 861, 1002
BstF5I GGATG 3 cut(s) 188, 635, 985
BstFNI CGCG 1 cut(s) 375
BstH2I RGCGCY 2 cut(s) 353, 440
BstHHI GCGC 4 cut(s) 352, 375, 377, 439
BstMAI GTCTC 2 cut(s) 70, 570
BstMWI GCNNNNNNNGC 1 cut(s) 467
BstNI CCWGG 4 cut(s) 606, 733, 882, 1281
BstSCI CCNGG 5 cut(s) 604, 731, 786, 880, 1279
BstSLI GKGCMC 1 cut(s) 463
BstUI CGCG 1 cut(s) 375
BstV1I GCAGC 1 cut(s) 101
BstV2I GAAGAC 1 cut(s) 536
BstX2I RGATCY 4 cut(s) 874, 934, 985, 1261
BstYI RGATCY 4 cut(s) 874, 934, 985, 1261
Bsu15I ATCGAT 2 cut(s) 954, 1178
BsuRI GGCC 2 cut(s) 117, 736
BsuTUI ATCGAT 2 cut(s) 954, 1178
BtsCI GGATG 3 cut(s) 188, 635, 985
Cac8I GCNNGC 2 cut(s) 342, 375
CciI TCATGA 3 cut(s) 547, 900, 996
CfoI GCGC 4 cut(s) 352, 375, 377, 439
Cfr10I RCCGGY 2 cut(s) 78, 1092
Cfr13I GGNCC 2 cut(s) 427, 1245
ClaI ATCGAT 2 cut(s) 954, 1178
Csp6I GTAC 3 cut(s) 171, 247, 791
CspAI ACCGGT 2 cut(s) 78, 1092
CviAII CATG 6 cut(s) 496, 548, 901, 997, 1058, 1222
CviQI GTAC 3 cut(s) 171, 247, 791
DdeI CTNAG 7 cut(s) 20, 93, 133, 207, 345, 861, 1002
EaeI YGGCCR 1 cut(s) 115
Eam1104I CTCTTC 4 cut(s) 37, 309, 417, 1134
EarI CTCTTC 4 cut(s) 37, 309, 417, 1134
Ecl136II GAGCTC 1 cut(s) 675
Eco130I CCWWGG 1 cut(s) 221
Eco147I AGGCCT 1 cut(s) 736
Eco24I GRGCYC 2 cut(s) 677, 923
Eco47I GGWCC 2 cut(s) 427, 1245
Eco53kI GAGCTC 1 cut(s) 675
Eco57I CTGAAG 1 cut(s) 935
Eco88I CYCGRG 1 cut(s) 356
EcoICRI GAGCTC 1 cut(s) 675
EcoRI GAATTC 1 cut(s) 866
EcoRII CCWGG 4 cut(s) 604, 731, 880, 1279
EcoT14I CCWWGG 1 cut(s) 221
EcoT38I GRGCYC 2 cut(s) 677, 923
ErhI CCWWGG 1 cut(s) 221
FaeI CATG 6 cut(s) 499, 551, 904, 1000, 1061, 1225
FalI AAGNNNNNCTT 2 cut(s) 830, 862
FaqI GGGAC 1 cut(s) 251
FatI CATG 6 cut(s) 495, 547, 900, 996, 1057, 1221
FbaI TGATCA 2 cut(s) 759, 993
Fnu4HI GCNGC 3 cut(s) 90, 98, 363
FokI GGATG 3 cut(s) 175, 642, 992
FriOI GRGCYC 2 cut(s) 677, 923
Fsp4HI GCNGC 3 cut(s) 90, 98, 363
FspBI CTAG 1 cut(s) 222
GlaI GCGC 4 cut(s) 351, 374, 376, 438
GluI GCNGC 3 cut(s) 90, 98, 363
GsaI CCCAGC 1 cut(s) 45
GsuI CTGGAG 3 cut(s) 389, 588, 1263
HaeII RGCGCY 2 cut(s) 353, 440
HaeIII GGCC 2 cut(s) 117, 736
HapII CCGG 5 cut(s) 79, 471, 788, 924, 1093
HhaI GCGC 4 cut(s) 352, 375, 377, 439
Hin1I GRCGYC 1 cut(s) 714
Hin1II CATG 6 cut(s) 499, 551, 904, 1000, 1061, 1225
Hin6I GCGC 4 cut(s) 350, 373, 375, 437
HinP1I GCGC 4 cut(s) 350, 373, 375, 437
HincII GTYRAC 1 cut(s) 1169
HindII GTYRAC 1 cut(s) 1169
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 5 cut(s) 110, 137, 155, 203, 389
HpaII CCGG 5 cut(s) 79, 471, 788, 924, 1093
HphI GGTGA 1 cut(s) 427
Hpy166II GTNNAC 2 cut(s) 280, 1169
Hpy188I TCNGA 9 cut(s) 21, 136, 142, 154, 202, 486, 915, 1040, 1134
Hpy188III TCNNGA 9 cut(s) 356, 368, 548, 901, 924, 997, 1067, 1153, 1255
Hpy8I GTNNAC 2 cut(s) 280, 1169
Hpy99I CGWCG 1 cut(s) 716
HpyAV CCTTC 6 cut(s) 79, 283, 412, 910, 1102, 1189
HpyCH4III ACNGT 2 cut(s) 170, 1245
HpyCH4IV ACGT 1 cut(s) 714
HpyCH4V TGCA 1 cut(s) 1063
HpyF10VI GCNNNNNNNGC 1 cut(s) 467
HpyF3I CTNAG 7 cut(s) 20, 93, 133, 207, 345, 861, 1002
HpySE526I ACGT 1 cut(s) 714
Hsp92I GRCGYC 1 cut(s) 714
Hsp92II CATG 6 cut(s) 499, 551, 904, 1000, 1061, 1225
HspAI GCGC 4 cut(s) 350, 373, 375, 437
Kpn2I TCCGGA 1 cut(s) 923
Ksp22I TGATCA 2 cut(s) 759, 993
LmnI GCTCC 6 cut(s) 322, 370, 672, 773, 926, 1237
Lsp1109I GCAGC 1 cut(s) 101
LweI GCATC 3 cut(s) 733, 1072, 1153
MaeI CTAG 1 cut(s) 222
MaeII ACGT 1 cut(s) 714
MaeIII GTNAC 1 cut(s) 679
MflI RGATCY 4 cut(s) 874, 934, 985, 1261
MhlI GDGCHC 6 cut(s) 342, 463, 677, 699, 778, 923
MlsI TGGCCA 1 cut(s) 117
MluCI AATT 9 cut(s) 266, 296, 453, 490, 585, 801, 866, 1160, 1215
MluNI TGGCCA 1 cut(s) 117
MlyI GAGTC 2 cut(s) 131, 149
Mox20I TGGCCA 1 cut(s) 117
MroI TCCGGA 1 cut(s) 923
MscI TGGCCA 1 cut(s) 117
MseI TTAA 6 cut(s) 56, 617, 648, 851, 966, 1163
Msp20I TGGCCA 1 cut(s) 117
MspI CCGG 5 cut(s) 79, 471, 788, 924, 1093
MspR9I CCNGG 5 cut(s) 606, 733, 788, 882, 1281
Mva1269I GAATGC 1 cut(s) 472
MvaI CCWGG 4 cut(s) 606, 733, 882, 1281
MvnI CGCG 1 cut(s) 375
MwoI GCNNNNNNNGC 1 cut(s) 467
NciI CCSGG 1 cut(s) 788
NlaIII CATG 6 cut(s) 499, 551, 904, 1000, 1061, 1225
NlaIV GGNNCC 2 cut(s) 460, 922
PaeR7I CTCGAG 1 cut(s) 356
PagI TCATGA 3 cut(s) 547, 900, 996
PauI GCGCGC 1 cut(s) 373
PceI AGGCCT 1 cut(s) 736
PctI GAATGC 1 cut(s) 472
PfeI GAWTC 3 cut(s) 110, 203, 389
PflMI CCANNNNNTGG 1 cut(s) 194
PinAI ACCGGT 2 cut(s) 78, 1092
PkrI GCNGC 3 cut(s) 91, 99, 364
PleI GAGTC 2 cut(s) 131, 149
PpsI GAGTC 2 cut(s) 131, 149
PsiI TTATAA 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 677
Psp6I CCWGG 4 cut(s) 604, 731, 880, 1279
PspFI CCCAGC 1 cut(s) 41
PspGI CCWGG 4 cut(s) 604, 731, 880, 1279
PspN4I GGNNCC 2 cut(s) 460, 922
PspPI GGNCC 2 cut(s) 427, 1245
PsuI RGATCY 4 cut(s) 874, 934, 985, 1261
PteI GCGCGC 1 cut(s) 373
RsaI GTAC 3 cut(s) 172, 248, 792
RsaNI GTAC 3 cut(s) 171, 247, 791
SacI GAGCTC 1 cut(s) 677
SaqAI TTAA 6 cut(s) 56, 617, 648, 851, 966, 1163
SatI GCNGC 3 cut(s) 90, 98, 363
Sau96I GGNCC 2 cut(s) 427, 1245
SchI GAGTC 2 cut(s) 131, 149
ScrFI CCNGG 5 cut(s) 606, 733, 788, 882, 1281
SduI GDGCHC 6 cut(s) 342, 463, 677, 699, 778, 923
SfaNI GCATC 3 cut(s) 733, 1072, 1153
Sfr274I CTCGAG 1 cut(s) 356
SinI GGWCC 2 cut(s) 427, 1245
SlaI CTCGAG 1 cut(s) 356
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 9 cut(s) 266, 296, 453, 490, 585, 801, 866, 1160, 1215
SseBI AGGCCT 1 cut(s) 736
SsiI CCGC 2 cut(s) 98, 362
SspI AATATT 1 cut(s) 947
SspMI CTAG 1 cut(s) 222
SstI GAGCTC 1 cut(s) 677
StuI AGGCCT 1 cut(s) 736
StyD4I CCNGG 5 cut(s) 604, 731, 786, 880, 1279
StyI CCWWGG 1 cut(s) 221
TaaI ACNGT 2 cut(s) 170, 1245
TaiI ACGT 1 cut(s) 717
TaqI TCGA 6 cut(s) 165, 357, 655, 711, 954, 1178
TasI AATT 9 cut(s) 266, 296, 453, 490, 585, 801, 866, 1160, 1215
TauI GCSGC 2 cut(s) 100, 365
TfiI GAWTC 3 cut(s) 110, 203, 389
Tru1I TTAA 6 cut(s) 56, 617, 648, 851, 966, 1163
Tru9I TTAA 6 cut(s) 56, 617, 648, 851, 966, 1163
TseI GCWGC 1 cut(s) 89
TspDTI ATGAA 7 cut(s) 17, 564, 827, 889, 903, 996, 1028
TspGWI ACGGA 1 cut(s) 541
Van91I CCANNNNNTGG 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 427, 1245
XapI RAATTY 3 cut(s) 585, 801, 866
XhoI CTCGAG 1 cut(s) 356
XmaJI CCTAGG 1 cut(s) 221
XspI CTAG 1 cut(s) 222
ZraI GACGTC 1 cut(s) 715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.