pycom05g27930

Putative serine esterase (DUF676)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
28786285 .. 28789759
3475 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g27930.11

Sequence Viewer

Length: 1323 bp
ATGGCGTCCGCTTCTCTGATTCACGCGCGCTTTGGGTACTTACCGAGTTTCAGCGGCAATCGGCGGAACGACTCCCAGGGACCTCTCGGCTCTTCGTCCTCCTCGTCCTCCAGTTCGTCCTCCTCCTCTTCGTCTTTCAGCTTCGGTTCCGGCATATATAGTAGTTGGAGAAATCAAGGTCTTAGAGCTCAAGCTATGACTAGTCAGGGAAATTTCGGACCCTCGAGGGGTGTTGCAAATGCGGAGGAGAAACCCGATCATCTTCTCGTCCTTGTTCATGGCATCATGGCAAGCCCAAGTGACTGGACATACGTGGAAGCGGAGTTAAAAAGGCGTCTAGGAAGAAATTTCTTAATCTATGCAAGTTCATGTAACACGTACACCAAAACTTTTTCTGGTATTGGTGGAGCTGGGAAACGATTAGCAGATGAAGTTATGCAACTTGTACAAAAGACAGAGAGCCTGAAGAAGATCTCATTTTTAGCCCATTCTCTTGGGGGCTTATTTGCAAGATACGCAATTTCTGTCCTTTACACACCCAATGATAGTGCCAGGTCAACTACTGCAAATACACGAACGGCAAACTCTTTGAGACAAGGAAAGATAGCTGGGTTAGAGCCTATCAATTTTGTAACATTGGCAACTCCACATCTTGGGGTGCGAGGGAAAAAGCAGCTTCCATTTTTATTGGGAGTACCTTTTTTAGAAAAGCTGGCTGCTCCAATTGCTCCTATTATTGTTGGTCGAACTGGTAGTCAGCTGTTTCTCACTGATGGTAAGCCCGAAAGACCACCACTTCTTTTGAGAATGGCATCTGATTGCGAAGATGGAAAGTTTATATCTTCTTTGGGCTCCTTCAAATCTCGGATTATTTATGCCAATGTGTCTTATGATCATATGGTTGGCTGGCGTACATCATCCATTAGGAGGGAGACGGAAATATTTAAGCCTCCTCGCAGGTCTTTGGACGGGTACAAACATGTTGTAGACGTGGAGTATTGTCCTCCAGTTTCCTCTGATGGTCCCCATTTTCCTCCCAAAGCAGCTAAAGCAAAAGAAGCAGCACAAAGCGAACCTAACATACAGAACACATTAGAATATCACGAAATTGTTGAAGATGAAATGATACGGGGATTACAGCAGCTAGGATGGAGAAAAGTTGATGTCAGCTTTCACTCGGCGTTTTGGCCCTTCTTTGCCCACAATAACATCCATGTGAAGAATGAATGGCTTCACAATGCCGGCGTCGGGGTGGTTGCTCACGTTGCCGACAGCCTGAAGCAACAAGAATCCACCTCCTCATTCATCACTGCCAGCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

441

Amino Acids

48.11

Weight (kDa)

9.53

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 223
Acc36I ACCTGC 1 cut(s) 948
AccB7I CCANNNNNTGG 1 cut(s) 653
AccI GTMKAC 1 cut(s) 987
AccII CGCG 2 cut(s) 26, 28
AciI CCGC 5 cut(s) 9, 54, 64, 242, 320
AcsI RAATTY 2 cut(s) 211, 346
AcuI CTGAAG 2 cut(s) 485, 1298
AcyI GRCGYC 3 cut(s) 5, 334, 1245
AfaI GTAC 6 cut(s) 38, 380, 447, 696, 913, 974
AfiI CCNNNNNNNGG 4 cut(s) 227, 653, 927, 1248
AflIII ACRYGT 2 cut(s) 375, 979
AgsI TTSAA 2 cut(s) 859, 1115
AhlI ACTAGT 1 cut(s) 200
AjiI CACGTC 1 cut(s) 991
AjnI CCWGG 2 cut(s) 75, 551
Alw21I GWGCWC 1 cut(s) 190
Alw26I GTCTC 2 cut(s) 586, 926
Ama87I CYCGRG 1 cut(s) 223
AoxI GGCC 1 cut(s) 1187
ApeKI GCWGC 5 cut(s) 673, 716, 1043, 1061, 1141
ApoI RAATTY 2 cut(s) 211, 346
ArsI GACNNNNNNTTYG 2 cut(s) 739, 771
Asp700I GAANNNNTTC 1 cut(s) 1230
AspLEI GCGC 2 cut(s) 28, 30
AspS9I GGNCC 4 cut(s) 80, 218, 1022, 1188
AvaI CYCGRG 1 cut(s) 223
AvaII GGWCC 3 cut(s) 80, 218, 1022
BanII GRGCYC 2 cut(s) 190, 854
Bbv12I GWGCWC 1 cut(s) 190
BbvI GCAGC 5 cut(s) 685, 703, 1055, 1073, 1153
BccI CCATC 4 cut(s) 767, 821, 1013, 1143
BceAI ACGGC 1 cut(s) 594
BciT130I CCWGG 2 cut(s) 77, 553
BclI TGATCA 1 cut(s) 892
BcoDI GTCTC 2 cut(s) 586, 926
BcuI ACTAGT 1 cut(s) 200
BfaI CTAG 3 cut(s) 201, 338, 1145
BfuAI ACCTGC 1 cut(s) 948
BglII AGATCT 1 cut(s) 471
BisI GCNGC 6 cut(s) 55, 674, 717, 1044, 1062, 1142
BlsI GCNGC 6 cut(s) 56, 675, 718, 1045, 1063, 1143
Bme1390I CCNGG 2 cut(s) 77, 553
Bme18I GGWCC 3 cut(s) 80, 218, 1022
BmeT110I CYCGRG 1 cut(s) 223
BmgBI CACGTC 1 cut(s) 991
BmgT120I GGNCC 4 cut(s) 80, 218, 1022, 1188
BmiI GGNNCC 5 cut(s) 81, 148, 220, 853, 1024
BmrFI CCNGG 2 cut(s) 77, 553
BmsI GCATC 2 cut(s) 291, 821
BpmI CTGGAG 2 cut(s) 94, 990
BpuEI CTTGAG 1 cut(s) 174
BsaAI YACGTR 2 cut(s) 313, 378
BsaHI GRCGYC 3 cut(s) 5, 334, 1245
BsaJI CCNNGG 2 cut(s) 75, 76
Bsc4I CCNNNNNNNGG 4 cut(s) 227, 653, 927, 1248
Bse118I RCCGGY 1 cut(s) 1241
Bse1I ACTGG 4 cut(s) 111, 308, 754, 1007
BseBI CCWGG 2 cut(s) 77, 553
BseDI CCNNGG 2 cut(s) 75, 76
BseGI GGATG 3 cut(s) 917, 1154, 1209
BseLI CCNNNNNNNGG 4 cut(s) 227, 653, 927, 1248
BseNI ACTGG 4 cut(s) 111, 308, 754, 1007
BsePI GCGCGC 1 cut(s) 26
BseRI GAGGAG 6 cut(s) 91, 112, 115, 260, 942, 1288
BseXI GCAGC 5 cut(s) 685, 703, 1055, 1073, 1153
BseYI CCCAGC 2 cut(s) 410, 608
Bsh1236I CGCG 2 cut(s) 26, 28
BshFI GGCC 1 cut(s) 1189
BsiHKAI GWGCWC 1 cut(s) 190
BsiHKCI CYCGRG 1 cut(s) 223
BsiSI CCGG 2 cut(s) 150, 1242
BslFI GGGAC 2 cut(s) 93, 1008
BslI CCNNNNNNNGG 4 cut(s) 227, 653, 927, 1248
BsmAI GTCTC 2 cut(s) 586, 926
BsmBI CGTCTC 1 cut(s) 926
BsmFI GGGAC 2 cut(s) 93, 1008
BsnI GGCC 1 cut(s) 1189
BsoBI CYCGRG 1 cut(s) 223
Bsp1286I GDGCHC 2 cut(s) 190, 854
Bsp1407I TGTACA 1 cut(s) 445
Bsp143I GATC 3 cut(s) 256, 471, 892
BspACI CCGC 5 cut(s) 9, 54, 64, 242, 320
BspANI GGCC 1 cut(s) 1189
BspFNI CGCG 2 cut(s) 26, 28
BspLI GGNNCC 5 cut(s) 81, 148, 220, 853, 1024
BspMI ACCTGC 1 cut(s) 948
BspQI GCTCTTC 1 cut(s) 97
BsrFI RCCGGY 1 cut(s) 1241
BsrGI TGTACA 1 cut(s) 445
BsrI ACTGG 4 cut(s) 111, 308, 754, 1007
BssAI RCCGGY 1 cut(s) 1241
BssECI CCNNGG 2 cut(s) 75, 76
BssHII GCGCGC 1 cut(s) 26
BssMI GATC 3 cut(s) 256, 471, 892
BssNI GRCGYC 3 cut(s) 5, 334, 1245
Bst2UI CCWGG 2 cut(s) 77, 553
Bst6I CTCTTC 2 cut(s) 97, 133
BstACI GRCGYC 3 cut(s) 5, 334, 1245
BstAUI TGTACA 1 cut(s) 445
BstBAI YACGTR 2 cut(s) 313, 378
BstC8I GCNNGC 6 cut(s) 28, 292, 714, 908, 1243, 1315
BstDEI CTNAG 1 cut(s) 182
BstF5I GGATG 3 cut(s) 917, 1154, 1209
BstFNI CGCG 2 cut(s) 26, 28
BstHHI GCGC 2 cut(s) 28, 30
BstKTI GATC 3 cut(s) 259, 474, 895
BstMAI GTCTC 2 cut(s) 586, 926
BstMBI GATC 3 cut(s) 256, 471, 892
BstMWI GCNNNNNNNGC 5 cut(s) 515, 725, 1049, 1058, 1265
BstNI CCWGG 2 cut(s) 77, 553
BstNSI RCATGY 1 cut(s) 983
BstSCI CCNGG 2 cut(s) 75, 551
BstUI CGCG 2 cut(s) 26, 28
BstV1I GCAGC 5 cut(s) 685, 703, 1055, 1073, 1153
BstX2I RGATCY 1 cut(s) 471
BstXI CCANNNNNNTGG 2 cut(s) 303, 494
BstYI RGATCY 1 cut(s) 471
BsuRI GGCC 1 cut(s) 1189
BtrI CACGTC 1 cut(s) 991
BtsCI GGATG 3 cut(s) 917, 1154, 1209
BtsI GCAGTG 1 cut(s) 1308
BtsIMutI CAGTG 2 cut(s) 768, 1308
BveI ACCTGC 1 cut(s) 948
Cac8I GCNNGC 6 cut(s) 28, 292, 714, 908, 1243, 1315
CfoI GCGC 2 cut(s) 28, 30
Cfr10I RCCGGY 1 cut(s) 1241
Cfr13I GGNCC 4 cut(s) 80, 218, 1022, 1188
CseI GACGC 2 cut(s) 323, 1234
Csp6I GTAC 6 cut(s) 37, 379, 446, 695, 912, 973
CspCI CAANNNNNGTGG 2 cut(s) 783, 818
CviAII CATG 5 cut(s) 278, 286, 369, 980, 1214
CviQI GTAC 6 cut(s) 37, 379, 446, 695, 912, 973
DdeI CTNAG 1 cut(s) 182
DpnI GATC 3 cut(s) 258, 473, 894
DpnII GATC 3 cut(s) 256, 471, 892
Eam1104I CTCTTC 2 cut(s) 97, 133
EarI CTCTTC 2 cut(s) 97, 133
EciI GGCGGA 1 cut(s) 79
Ecl136II GAGCTC 1 cut(s) 188
Eco24I GRGCYC 2 cut(s) 190, 854
Eco47I GGWCC 3 cut(s) 80, 218, 1022
Eco53kI GAGCTC 1 cut(s) 188
Eco57I CTGAAG 2 cut(s) 485, 1298
Eco88I CYCGRG 1 cut(s) 223
EcoICRI GAGCTC 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 80
EcoRII CCWGG 2 cut(s) 75, 551
EcoT38I GRGCYC 2 cut(s) 190, 854
Esp3I CGTCTC 1 cut(s) 926
FaeI CATG 5 cut(s) 281, 289, 372, 983, 1217
FaqI GGGAC 2 cut(s) 93, 1008
FatI CATG 5 cut(s) 277, 285, 368, 979, 1213
FauNDI CATATG 1 cut(s) 897
FbaI TGATCA 1 cut(s) 892
FblI GTMKAC 1 cut(s) 987
Fnu4HI GCNGC 6 cut(s) 55, 674, 717, 1044, 1062, 1142
FokI GGATG 3 cut(s) 904, 1161, 1196
FriOI GRGCYC 2 cut(s) 190, 854
Fsp4HI GCNGC 6 cut(s) 55, 674, 717, 1044, 1062, 1142
FspBI CTAG 3 cut(s) 201, 338, 1145
GlaI GCGC 2 cut(s) 27, 29
GluI GCNGC 6 cut(s) 55, 674, 717, 1044, 1062, 1142
GsaI CCCAGC 2 cut(s) 414, 612
GsuI CTGGAG 2 cut(s) 94, 990
HaeIII GGCC 1 cut(s) 1189
HapII CCGG 2 cut(s) 150, 1242
HgaI GACGC 2 cut(s) 323, 1234
HhaI GCGC 2 cut(s) 28, 30
Hin1I GRCGYC 3 cut(s) 5, 334, 1245
Hin1II CATG 5 cut(s) 281, 289, 372, 983, 1217
Hin6I GCGC 2 cut(s) 26, 28
HinP1I GCGC 2 cut(s) 26, 28
HincII GTYRAC 1 cut(s) 558
HindII GTYRAC 1 cut(s) 558
HinfI GANTC 3 cut(s) 19, 71, 1289
HpaII CCGG 2 cut(s) 150, 1242
Hpy166II GTNNAC 3 cut(s) 381, 558, 988
Hpy188I TCNGA 5 cut(s) 18, 218, 817, 867, 1018
Hpy188III TCNNGA 1 cut(s) 1103
Hpy8I GTNNAC 3 cut(s) 381, 558, 988
Hpy99I CGWCG 1 cut(s) 1250
HpyAV CCTTC 2 cut(s) 865, 1201
HpyCH4IV ACGT 4 cut(s) 312, 377, 990, 1263
HpyCH4V TGCA 5 cut(s) 236, 362, 439, 509, 566
HpyF10VI GCNNNNNNNGC 5 cut(s) 515, 725, 1049, 1058, 1265
HpyF3I CTNAG 1 cut(s) 182
HpySE526I ACGT 4 cut(s) 312, 377, 990, 1263
Hsp92I GRCGYC 3 cut(s) 5, 334, 1245
Hsp92II CATG 5 cut(s) 281, 289, 372, 983, 1217
HspAI GCGC 2 cut(s) 26, 28
KroI GCCGGC 1 cut(s) 1241
KroNI GCCGGC 1 cut(s) 1243
Ksp22I TGATCA 1 cut(s) 892
Kzo9I GATC 3 cut(s) 256, 471, 892
LguI GCTCTTC 1 cut(s) 97
LmnI GCTCC 4 cut(s) 407, 724, 733, 857
Lsp1109I GCAGC 5 cut(s) 685, 703, 1055, 1073, 1153
LweI GCATC 2 cut(s) 291, 821
MaeI CTAG 3 cut(s) 201, 338, 1145
MaeII ACGT 4 cut(s) 312, 377, 990, 1263
MaeIII GTNAC 3 cut(s) 299, 371, 631
MalI GATC 3 cut(s) 258, 473, 894
MboI GATC 3 cut(s) 256, 471, 892
MfeI CAATTG 1 cut(s) 723
MflI RGATCY 1 cut(s) 471
MhlI GDGCHC 2 cut(s) 190, 854
MluCI AATT 6 cut(s) 211, 346, 519, 625, 723, 1107
MlyI GAGTC 1 cut(s) 65
MmeI TCCRAC 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 1241
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 3 cut(s) 326, 353, 945
MslI CAYNNNNRTG 1 cut(s) 1214
MspA1I CMGCKG 2 cut(s) 54, 760
MspI CCGG 2 cut(s) 150, 1242
MspR9I CCNGG 2 cut(s) 77, 553
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 2 cut(s) 77, 553
MvnI CGCG 2 cut(s) 26, 28
MwoI GCNNNNNNNGC 5 cut(s) 515, 725, 1049, 1058, 1265
NaeI GCCGGC 1 cut(s) 1243
NdeI CATATG 1 cut(s) 897
NdeII GATC 3 cut(s) 256, 471, 892
NgoMIV GCCGGC 1 cut(s) 1241
NlaIII CATG 5 cut(s) 281, 289, 372, 983, 1217
NlaIV GGNNCC 5 cut(s) 81, 148, 220, 853, 1024
NmeAIII GCCGAG 2 cut(s) 66, 1157
NmuCI GTSAC 1 cut(s) 299
NspI RCATGY 1 cut(s) 983
PaeR7I CTCGAG 1 cut(s) 223
PasI CCCWGGG 1 cut(s) 76
PauI GCGCGC 1 cut(s) 26
PciI ACATGT 1 cut(s) 979
PciSI GCTCTTC 1 cut(s) 97
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PdiI GCCGGC 1 cut(s) 1243
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 2 cut(s) 19, 1289
PflMI CCANNNNNTGG 1 cut(s) 653
PkrI GCNGC 6 cut(s) 56, 675, 718, 1045, 1063, 1143
PleI GAGTC 1 cut(s) 65
PpsI GAGTC 1 cut(s) 65
Ppu21I YACGTR 2 cut(s) 313, 378
PpuMI RGGWCCY 1 cut(s) 80
PscI ACATGT 1 cut(s) 979
Psp124BI GAGCTC 1 cut(s) 190
Psp5II RGGWCCY 1 cut(s) 80
Psp6I CCWGG 2 cut(s) 75, 551
PspFI CCCAGC 2 cut(s) 410, 608
PspGI CCWGG 2 cut(s) 75, 551
PspN4I GGNNCC 5 cut(s) 81, 148, 220, 853, 1024
PspPI GGNCC 4 cut(s) 80, 218, 1022, 1188
PspPPI RGGWCCY 1 cut(s) 80
PspXI VCTCGAGB 1 cut(s) 223
PsrI GAACNNNNNNTAC 2 cut(s) 1065, 1097
PsuI RGATCY 1 cut(s) 471
PteI GCGCGC 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 760
RsaI GTAC 6 cut(s) 38, 380, 447, 696, 913, 974
RsaNI GTAC 6 cut(s) 37, 379, 446, 695, 912, 973
RseI CAYNNNNRTG 1 cut(s) 1214
SacI GAGCTC 1 cut(s) 190
SapI GCTCTTC 1 cut(s) 97
SaqAI TTAA 3 cut(s) 326, 353, 945
SatI GCNGC 6 cut(s) 55, 674, 717, 1044, 1062, 1142
Sau3AI GATC 3 cut(s) 256, 471, 892
Sau96I GGNCC 4 cut(s) 80, 218, 1022, 1188
SchI GAGTC 1 cut(s) 65
ScrFI CCNGG 2 cut(s) 77, 553
SduI GDGCHC 2 cut(s) 190, 854
SfaNI GCATC 2 cut(s) 291, 821
Sfr274I CTCGAG 1 cut(s) 223
SinI GGWCC 3 cut(s) 80, 218, 1022
SlaI CTCGAG 1 cut(s) 223
SmiMI CAYNNNNRTG 1 cut(s) 1214
SmlI CTYRAG 2 cut(s) 189, 223
SmoI CTYRAG 2 cut(s) 189, 223
SpeI ACTAGT 1 cut(s) 200
Sse9I AATT 6 cut(s) 211, 346, 519, 625, 723, 1107
SsiI CCGC 5 cut(s) 9, 54, 64, 242, 320
SspI AATATT 1 cut(s) 942
SspMI CTAG 3 cut(s) 201, 338, 1145
SstI GAGCTC 1 cut(s) 190
StyD4I CCNGG 2 cut(s) 75, 551
TaiI ACGT 4 cut(s) 315, 380, 993, 1266
TaqI TCGA 2 cut(s) 224, 745
TasI AATT 6 cut(s) 211, 346, 519, 625, 723, 1107
TatI WGTACW 1 cut(s) 445
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 2 cut(s) 19, 1289
Tru1I TTAA 3 cut(s) 326, 353, 945
Tru9I TTAA 3 cut(s) 326, 353, 945
TscAI CASTG 2 cut(s) 775, 1315
TseFI GTSAC 1 cut(s) 299
TseI GCWGC 5 cut(s) 673, 716, 1043, 1061, 1141
Tsp45I GTSAC 1 cut(s) 299
TspDTI ATGAA 6 cut(s) 266, 357, 444, 1134, 1239, 1294
TspGWI ACGGA 1 cut(s) 950
TspRI CASTG 2 cut(s) 775, 1315
Van91I CCANNNNNTGG 1 cut(s) 653
VpaK11BI GGWCC 3 cut(s) 80, 218, 1022
XapI RAATTY 2 cut(s) 211, 346
XceI RCATGY 1 cut(s) 983
XhoI CTCGAG 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 987
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 3 cut(s) 201, 338, 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.