RLG00000031776

Putative serine esterase (DUF676)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0004186
Physical Location & Seq
Forward (+)
8159791 .. 8163032
3242 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031776

Sequence Viewer

Length: 1338 bp
ATGGCCTCCGCTCCTCTAATCCACGCGCGCTGCGGTTACTCGCCCAGATTCAGTAGCAGCAGTAATCGACGGAATGGAGGAGGAGGAGCTCTAGGTTCGTCGCCGTCGCCGTCGTCGTCTTCGTCTTCGTCTTCGTGTTGCTCTTCTTCGTATTTGGCCTTCTCTTCTGGGGTGTATAATAGTTGGAGGAACCAAGGACTCAGAGCTCACGCTATGACCAGTCAGGGGAATTTTGCTTCTTCCTCCAGAGGTGTTGCGAGTGCGGAGAAGAAGCCTGATCATCTTCTCGTACTTGTTCATGGTATATTGGCTAGCCCAAGTGATTGGACATACGTGGAAGCAGAATTACGGAAGCGTCTAGGCAGAAGCTTCTTAATCTATGCAAGTTCATGCAACACGTACACAAAAACTTTTGCCGGGATTGATGGAGCCGGAAAGAGACTGGCAAATGAAGTCATGCAAGTTGTGCAAAAGACTGATAGCCTGAAGAAAATCTCATTCTTAGCCCATTCTCTAGGGGGCTTGTTTGCAAGATATGCAATATCTGTTCTTTACAGACCCAATGATATTCCCAATTCACCTCTTGTAAATTCAAAAGCAGCACACTCTTTGAGACGAGGAAAGATTGCTGGTTTGGAGCCAATCAATTTTGTAACATTGGCAACCCCACATCTTGGGGTGAGGGGTAAAAAGCAGCTTCCATTTCTTTTAGGCGTACCTTTATTAGAAAAGCTGGCTGCGCCAATTGCTCCTATTGTTGTTGGTCGAACTGGTAGTCAGCTGTTCCTCACTGATGGTAAACCTGAAAAACCACCACTTCTTTTGAGAATGGCATCTGATTGTGAAGATGGAAATTTTGTATCTGCATTGGGATCGTTTAGATCTCGGATTCTTTATGCTAATGTATCTTATGATCATATGGTTGGTTGGCGTACATCATCCATAAGGAGAGAGACAGAAATTTTTAAGCCTCCTCGCCGGTCTTTGGTTGGCTACAAGCATGTTGTAGATGTAGAGTATTGTCCCCCAGTTTCCTCTGATGGTCCCCATTTTCCTCCTGAAGCAGCTAAGGCGAAGGAGGCGGCCCAAAGTAAACCCAACCAACAGAACACCTTGGAATATCATGAGATTGTTGAAGATGAAATGATACGAGGCTTACAACAGTTGGGATGGAAAAAAGTTGATGTCAGCTTTCATTCTGCACCTTGGCCATTCTTCGCCCACAACAACATTCATGTAAAAAATGAATGGCTTCACAATGCTGGTGCTGGAGTGGTTGCACACGTTGCTGACACTCTAAAGCAACAAGAATCCTCCACGCTGACTGCCAGCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF676

Protein Analysis

446

Amino Acids

48.31

Weight (kDa)

9.63

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF676 PF05057 90 - 312 3.8e-66 Putative serine esterase (DUF676)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 674
AccBSI CCGCTC 1 cut(s) 11
AccII CGCG 2 cut(s) 26, 28
AciI CCGC 4 cut(s) 9, 33, 263, 1082
AclWI GGATC 1 cut(s) 880
AcoI YGGCCR 1 cut(s) 1208
AcsI RAATTY 4 cut(s) 229, 589, 853, 960
AcuI CTGAAG 2 cut(s) 506, 1080
AfaI GTAC 4 cut(s) 291, 401, 717, 934
AfiI CCNNNNNNNGG 3 cut(s) 225, 674, 985
AflIII ACRYGT 2 cut(s) 396, 1282
AgsI TTSAA 2 cut(s) 594, 1136
AluBI AGCT 9 cut(s) 89, 206, 369, 697, 733, 781, 1067, 1191, 1332
AluI AGCT 9 cut(s) 89, 206, 369, 697, 733, 781, 1067, 1191, 1332
Alw21I GWGCWC 2 cut(s) 91, 208
Alw26I GTCTC 3 cut(s) 433, 607, 947
AlwI GGATC 1 cut(s) 880
AoxI GGCC 4 cut(s) 3, 156, 1083, 1208
ApeKI GCWGC 6 cut(s) 30, 57, 599, 694, 737, 1064
ApoI RAATTY 4 cut(s) 229, 589, 853, 960
ArsI GACNNNNNNTTYG 2 cut(s) 760, 792
Asp700I GAANNNNTTC 1 cut(s) 1251
AspLEI GCGC 3 cut(s) 28, 30, 742
AspS9I GGNCC 2 cut(s) 1043, 1084
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 2 cut(s) 570, 691
AsuNHI GCTAGC 1 cut(s) 311
AvaII GGWCC 1 cut(s) 1043
BalI TGGCCA 1 cut(s) 1210
BanII GRGCYC 2 cut(s) 91, 208
BarI GAAGNNNNNNTAC 4 cut(s) 143, 175, 330, 362
BbsI GAAGAC 3 cut(s) 111, 117, 123
Bbv12I GWGCWC 2 cut(s) 91, 208
BbvI GCAGC 6 cut(s) 17, 69, 611, 706, 724, 1076
BccI CCATC 5 cut(s) 419, 788, 842, 1034, 1164
BceAI ACGGC 2 cut(s) 88, 94
BcgI CGANNNNNNTGC 2 cut(s) 855, 889
BclI TGATCA 2 cut(s) 277, 913
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 433, 607, 947
BfaI CTAG 4 cut(s) 92, 312, 359, 515
BglII AGATCT 1 cut(s) 881
BisI GCNGC 7 cut(s) 31, 58, 600, 695, 738, 1065, 1083
BlsI GCNGC 7 cut(s) 32, 59, 601, 696, 739, 1066, 1084
Bme1390I CCNGG 1 cut(s) 418
Bme18I GGWCC 1 cut(s) 1043
BmgT120I GGNCC 2 cut(s) 1043, 1084
BmiI GGNNCC 4 cut(s) 191, 430, 639, 1045
BmrFI CCNGG 1 cut(s) 418
BmrI ACTGGG 1 cut(s) 1022
BmsI GCATC 1 cut(s) 842
BmtI GCTAGC 1 cut(s) 315
BmuI ACTGGG 1 cut(s) 1022
BpiI GAAGAC 3 cut(s) 111, 117, 123
BpmI CTGGAG 2 cut(s) 229, 1290
Bpu10I CCTNAGC 1 cut(s) 1068
BpuMI CCSGG 1 cut(s) 418
BsaAI YACGTR 2 cut(s) 334, 399
BsaJI CCNNGG 3 cut(s) 193, 1113, 1205
Bsc4I CCNNNNNNNGG 3 cut(s) 225, 674, 985
Bse118I RCCGGY 1 cut(s) 978
Bse1I ACTGG 4 cut(s) 219, 447, 775, 1028
BseDI CCNNGG 3 cut(s) 193, 1113, 1205
BseGI GGATG 2 cut(s) 938, 1175
BseLI CCNNNNNNNGG 3 cut(s) 225, 674, 985
BseMII CTCAG 1 cut(s) 214
BseNI ACTGG 4 cut(s) 219, 447, 775, 1028
BsePI GCGCGC 1 cut(s) 26
BseRI GAGGAG 4 cut(s) 93, 96, 99, 963
BseXI GCAGC 6 cut(s) 17, 69, 611, 706, 724, 1076
BsgI GTGCAG 1 cut(s) 1185
Bsh1236I CGCG 2 cut(s) 26, 28
BshFI GGCC 4 cut(s) 5, 158, 1085, 1210
BsiHKAI GWGCWC 2 cut(s) 91, 208
BsiSI CCGG 3 cut(s) 417, 432, 979
BslFI GGGAC 2 cut(s) 1008, 1029
BslI CCNNNNNNNGG 3 cut(s) 225, 674, 985
BsmAI GTCTC 3 cut(s) 433, 607, 947
BsmBI CGTCTC 1 cut(s) 607
BsmFI GGGAC 2 cut(s) 1008, 1029
BsnI GGCC 4 cut(s) 5, 158, 1085, 1210
Bsp1286I GDGCHC 2 cut(s) 91, 208
Bsp143I GATC 4 cut(s) 277, 872, 881, 913
BspACI CCGC 4 cut(s) 9, 33, 263, 1082
BspANI GGCC 4 cut(s) 5, 158, 1085, 1210
BspCNI CTCAG 1 cut(s) 213
BspFNI CGCG 2 cut(s) 26, 28
BspHI TCATGA 1 cut(s) 1123
BspLI GGNNCC 4 cut(s) 191, 430, 639, 1045
BspOI GCTAGC 1 cut(s) 315
BspPI GGATC 1 cut(s) 880
BspQI GCTCTTC 1 cut(s) 148
BsrBI CCGCTC 1 cut(s) 11
BsrFI RCCGGY 1 cut(s) 978
BsrI ACTGG 4 cut(s) 219, 447, 775, 1028
BssAI RCCGGY 1 cut(s) 978
BssECI CCNNGG 3 cut(s) 193, 1113, 1205
BssHII GCGCGC 1 cut(s) 26
BssMI GATC 4 cut(s) 277, 872, 881, 913
BssT1I CCWWGG 3 cut(s) 193, 1113, 1205
Bst4CI ACNGT 1 cut(s) 1164
Bst6I CTCTTC 2 cut(s) 148, 169
BstAPI GCANNNNNTGC 3 cut(s) 466, 536, 1286
BstBAI YACGTR 2 cut(s) 334, 399
BstC8I GCNNGC 4 cut(s) 28, 313, 735, 1330
BstDEI CTNAG 3 cut(s) 200, 502, 1068
BstF5I GGATG 2 cut(s) 938, 1175
BstFNI CGCG 2 cut(s) 26, 28
BstHHI GCGC 3 cut(s) 28, 30, 742
BstKTI GATC 4 cut(s) 280, 875, 884, 916
BstMAI GTCTC 3 cut(s) 433, 607, 947
BstMBI GATC 4 cut(s) 277, 872, 881, 913
BstMWI GCNNNNNNNGC 7 cut(s) 466, 536, 739, 746, 1070, 1079, 1286
BstNSI RCATGY 1 cut(s) 1004
BstSCI CCNGG 1 cut(s) 416
BstUI CGCG 2 cut(s) 26, 28
BstV1I GCAGC 6 cut(s) 17, 69, 611, 706, 724, 1076
BstV2I GAAGAC 3 cut(s) 111, 117, 123
BstX2I RGATCY 1 cut(s) 881
BstXI CCANNNNNNTGG 1 cut(s) 324
BstYI RGATCY 1 cut(s) 881
BsuRI GGCC 4 cut(s) 5, 158, 1085, 1210
BtsCI GGATG 2 cut(s) 938, 1175
BtsIMutI CAGTG 1 cut(s) 789
Cac8I GCNNGC 4 cut(s) 28, 313, 735, 1330
CciI TCATGA 1 cut(s) 1123
CfoI GCGC 3 cut(s) 28, 30, 742
Cfr10I RCCGGY 1 cut(s) 978
Cfr13I GGNCC 2 cut(s) 1043, 1084
CseI GACGC 1 cut(s) 344
Csp6I GTAC 4 cut(s) 290, 400, 716, 933
CspCI CAANNNNNGTGG 2 cut(s) 804, 839
CviAII CATG 6 cut(s) 299, 390, 457, 1001, 1124, 1235
CviQI GTAC 4 cut(s) 290, 400, 716, 933
DdeI CTNAG 3 cut(s) 200, 502, 1068
DpnI GATC 4 cut(s) 279, 874, 883, 915
DpnII GATC 4 cut(s) 277, 872, 881, 913
EaeI YGGCCR 1 cut(s) 1208
Eam1104I CTCTTC 2 cut(s) 148, 169
EarI CTCTTC 2 cut(s) 148, 169
Ecl136II GAGCTC 2 cut(s) 89, 206
Eco130I CCWWGG 3 cut(s) 193, 1113, 1205
Eco24I GRGCYC 2 cut(s) 91, 208
Eco47I GGWCC 1 cut(s) 1043
Eco53kI GAGCTC 2 cut(s) 89, 206
Eco57I CTGAAG 2 cut(s) 506, 1080
EcoICRI GAGCTC 2 cut(s) 89, 206
EcoT14I CCWWGG 3 cut(s) 193, 1113, 1205
EcoT38I GRGCYC 2 cut(s) 91, 208
ErhI CCWWGG 3 cut(s) 193, 1113, 1205
Esp3I CGTCTC 1 cut(s) 607
FaeI CATG 6 cut(s) 302, 393, 460, 1004, 1127, 1238
FaqI GGGAC 2 cut(s) 1008, 1029
FatI CATG 6 cut(s) 298, 389, 456, 1000, 1123, 1234
FauNDI CATATG 1 cut(s) 918
FbaI TGATCA 2 cut(s) 277, 913
Fnu4HI GCNGC 7 cut(s) 31, 58, 600, 695, 738, 1065, 1083
FokI GGATG 2 cut(s) 925, 1182
FriOI GRGCYC 2 cut(s) 91, 208
Fsp4HI GCNGC 7 cut(s) 31, 58, 600, 695, 738, 1065, 1083
FspBI CTAG 4 cut(s) 92, 312, 359, 515
GlaI GCGC 3 cut(s) 27, 29, 741
GluI GCNGC 7 cut(s) 31, 58, 600, 695, 738, 1065, 1083
GsuI CTGGAG 2 cut(s) 229, 1290
HaeIII GGCC 4 cut(s) 5, 158, 1085, 1210
HapII CCGG 3 cut(s) 417, 432, 979
HgaI GACGC 1 cut(s) 344
HhaI GCGC 3 cut(s) 28, 30, 742
Hin1II CATG 6 cut(s) 302, 393, 460, 1004, 1127, 1238
Hin6I GCGC 3 cut(s) 26, 28, 740
HinP1I GCGC 3 cut(s) 26, 28, 740
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 4 cut(s) 48, 198, 889, 1310
HpaII CCGG 3 cut(s) 417, 432, 979
HphI GGTGA 2 cut(s) 570, 691
Hpy166II GTNNAC 3 cut(s) 402, 800, 1094
Hpy188I TCNGA 4 cut(s) 203, 838, 888, 1039
Hpy188III TCNNGA 3 cut(s) 246, 1058, 1124
Hpy8I GTNNAC 3 cut(s) 402, 800, 1094
Hpy99I CGWCG 5 cut(s) 72, 103, 109, 115, 118
HpyAV CCTTC 2 cut(s) 169, 1069
HpyCH4III ACNGT 1 cut(s) 1164
HpyCH4IV ACGT 3 cut(s) 333, 398, 1284
HpyCH4V TGCA 9 cut(s) 383, 393, 460, 469, 530, 539, 866, 1202, 1280
HpyF10VI GCNNNNNNNGC 7 cut(s) 466, 536, 739, 746, 1070, 1079, 1286
HpyF3I CTNAG 3 cut(s) 200, 502, 1068
HpySE526I ACGT 3 cut(s) 333, 398, 1284
Hsp92II CATG 6 cut(s) 302, 393, 460, 1004, 1127, 1238
HspAI GCGC 3 cut(s) 26, 28, 740
Ksp22I TGATCA 2 cut(s) 277, 913
Kzo9I GATC 4 cut(s) 277, 872, 881, 913
LguI GCTCTTC 1 cut(s) 148
LmnI GCTCC 5 cut(s) 16, 86, 428, 637, 754
Lsp1109I GCAGC 6 cut(s) 17, 69, 611, 706, 724, 1076
LweI GCATC 1 cut(s) 842
MaeI CTAG 4 cut(s) 92, 312, 359, 515
MaeII ACGT 3 cut(s) 333, 398, 1284
MaeIII GTNAC 2 cut(s) 35, 652
MalI GATC 4 cut(s) 279, 874, 883, 915
MbiI CCGCTC 1 cut(s) 11
MboI GATC 4 cut(s) 277, 872, 881, 913
MfeI CAATTG 1 cut(s) 744
MflI RGATCY 1 cut(s) 881
MhlI GDGCHC 2 cut(s) 91, 208
MlsI TGGCCA 1 cut(s) 1210
MluCI AATT 8 cut(s) 229, 344, 574, 589, 646, 744, 853, 960
MluNI TGGCCA 1 cut(s) 1210
MlyI GAGTC 1 cut(s) 192
MmeI TCCRAC 1 cut(s) 164
Mox20I TGGCCA 1 cut(s) 1210
MroXI GAANNNNTTC 1 cut(s) 1251
MscI TGGCCA 1 cut(s) 1210
MseI TTAA 2 cut(s) 374, 966
Msp20I TGGCCA 1 cut(s) 1210
MspA1I CMGCKG 1 cut(s) 781
MspI CCGG 3 cut(s) 417, 432, 979
MspR9I CCNGG 1 cut(s) 418
MunI CAATTG 1 cut(s) 744
MvnI CGCG 2 cut(s) 26, 28
MwoI GCNNNNNNNGC 7 cut(s) 466, 536, 739, 746, 1070, 1079, 1286
NciI CCSGG 1 cut(s) 418
NdeI CATATG 1 cut(s) 918
NdeII GATC 4 cut(s) 277, 872, 881, 913
NheI GCTAGC 1 cut(s) 311
NlaIII CATG 6 cut(s) 302, 393, 460, 1004, 1127, 1238
NlaIV GGNNCC 4 cut(s) 191, 430, 639, 1045
NspI RCATGY 1 cut(s) 1004
PagI TCATGA 1 cut(s) 1123
PauI GCGCGC 1 cut(s) 26
PciSI GCTCTTC 1 cut(s) 148
PcsI WCGNNNNNNNCGW 3 cut(s) 107, 113, 119
PdmI GAANNNNTTC 1 cut(s) 1251
PfeI GAWTC 3 cut(s) 48, 889, 1310
PflMI CCANNNNNTGG 1 cut(s) 674
PkrI GCNGC 7 cut(s) 32, 59, 601, 696, 739, 1066, 1084
PleI GAGTC 1 cut(s) 192
PpsI GAGTC 1 cut(s) 192
Ppu21I YACGTR 2 cut(s) 334, 399
Psp124BI GAGCTC 2 cut(s) 91, 208
PspN4I GGNNCC 4 cut(s) 191, 430, 639, 1045
PspPI GGNCC 2 cut(s) 1043, 1084
PsuI RGATCY 1 cut(s) 881
PteI GCGCGC 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 781
RsaI GTAC 4 cut(s) 291, 401, 717, 934
RsaNI GTAC 4 cut(s) 290, 400, 716, 933
SacI GAGCTC 2 cut(s) 91, 208
SapI GCTCTTC 1 cut(s) 148
SaqAI TTAA 2 cut(s) 374, 966
SatI GCNGC 7 cut(s) 31, 58, 600, 695, 738, 1065, 1083
Sau3AI GATC 4 cut(s) 277, 872, 881, 913
Sau96I GGNCC 2 cut(s) 1043, 1084
SchI GAGTC 1 cut(s) 192
ScrFI CCNGG 1 cut(s) 418
SduI GDGCHC 2 cut(s) 91, 208
SfaNI GCATC 1 cut(s) 842
SinI GGWCC 1 cut(s) 1043
Sse9I AATT 8 cut(s) 229, 344, 574, 589, 646, 744, 853, 960
SsiI CCGC 4 cut(s) 9, 33, 263, 1082
SspMI CTAG 4 cut(s) 92, 312, 359, 515
SstI GAGCTC 2 cut(s) 91, 208
StyD4I CCNGG 1 cut(s) 416
StyI CCWWGG 3 cut(s) 193, 1113, 1205
TaaI ACNGT 1 cut(s) 1164
TaiI ACGT 3 cut(s) 336, 401, 1287
TaqI TCGA 2 cut(s) 67, 766
TasI AATT 8 cut(s) 229, 344, 574, 589, 646, 744, 853, 960
TauI GCSGC 1 cut(s) 1085
TfiI GAWTC 3 cut(s) 48, 889, 1310
Tru1I TTAA 2 cut(s) 374, 966
Tru9I TTAA 2 cut(s) 374, 966
TscAI CASTG 1 cut(s) 796
TseI GCWGC 6 cut(s) 30, 57, 599, 694, 737, 1064
TspDTI ATGAA 7 cut(s) 287, 378, 465, 1155, 1184, 1223, 1260
TspGWI ACGGA 2 cut(s) 85, 364
TspRI CASTG 1 cut(s) 796
Van91I CCANNNNNTGG 1 cut(s) 674
VpaK11BI GGWCC 1 cut(s) 1043
XapI RAATTY 4 cut(s) 229, 589, 853, 960
XceI RCATGY 1 cut(s) 1004
XmnI GAANNNNTTC 1 cut(s) 1251
XspI CTAG 4 cut(s) 92, 312, 359, 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.