Rh5CG091800

Putative serine esterase (DUF676)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0004186
Physical Location & Seq
Forward (+)
7242024 .. 7244934
2911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG091800.1

Sequence Viewer

Length: 1125 bp
ATGACCAGTCAGGGGAATTTTGCTTCTTCCTCCAGAGGTGTTGCGAGTGCGGAGAAGAAGCCTGATCATCTTCTCGTACTTGTTCATGGCATATTGGCTAGCCCGAGTGATTGGACATACGTGGAAGCAGAATTACGGAAGCGTCTAGGCAGAAGCTTCTTAATCTATGCAAGTTCATGCAACACGTACACAAAAACTTTTGCCGGGATTGATGGAGCTGGAAAGAGACTGGCAGATGAAGTCATGCAAGTTGTGCAAAAGACTGATAGCCTGAAGAAAATCTCATTCTTAGCCCATTCTCTAGGGGGCTTGTTTGCAAGATACGCAATATCTGTTCTTTACAGACCCAATGATATTCCCAATTCACCTCTTGTAAATTCAAAAGCAACACACTCTTTGAGACGAGGAAAGATTGCCGGTTTGGAGCCAATCAATTTTGTAACATTGGCAACCCCACATCTTGGGGTAAGGGGGAAAAAGCAGCTTCCATTTCTTTTAGGTGTACCATTGTTAGAAAAGCTGGCTGCGCCAATTGCTCCTATTGTTGTTGGTCGAACTGGTAGTCAGCTGTTCCTCACTGATGGTAAACCTGAAAAACCACCGCTTCTTTTGAGAATGGCATCTGATTGTGAAGATGGAAATTTTGTATCTGCATTGGGATTGTTTAGATCTCGGATTCTTTATGCTAATGTATCTTATGATCATATGGTTGGTTGGCGTACATCATCCATAAGGAGAGAGACAGAAATTTTTAAGCCTCCTCGCCGGTCTTTGGTTGGCTACAAGCATGTTGTAGATGTAGAGTATTGTCCCCCAGTTTCCTCTGACGGCCCCCATTTTCCTCCTGAAGCAGCTAAGGCGAAGGAGGCAGCCCAAAGTAAACCCAACCAACAGAACACCTTGGAATATCATGAAATTGTTGAAGATGAAATGATACGAGGCTTACAACAGTTGGGATGGAAAAAAGTTGATGTCAGCTTTCATTCTGCACCTTGGCCATTCTTCGCCCACAACAACATTCATGTAAAAAATGAATGGCTTCACAATGCTGGTGCTGGAGTGGTTGCACACGTTGCTGACACTCTAAAGCAACAAGAATCCTCCACATTGACTGCCAGCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF676

Protein Analysis

374

Amino Acids

41.15

Weight (kDa)

9.4

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF676 PF05057 19 - 241 3.1e-66 Putative serine esterase (DUF676)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 461
AciI CCGC 2 cut(s) 50, 602
AcoI YGGCCR 1 cut(s) 995
AcsI RAATTY 4 cut(s) 16, 376, 640, 747
AcuI CTGAAG 2 cut(s) 293, 867
AfaI GTAC 4 cut(s) 78, 188, 504, 721
AfiI CCNNNNNNNGG 3 cut(s) 12, 461, 772
AflIII ACRYGT 2 cut(s) 183, 1069
AgsI TTSAA 2 cut(s) 381, 923
AluBI AGCT 8 cut(s) 156, 218, 484, 520, 568, 854, 978, 1119
AluI AGCT 8 cut(s) 156, 218, 484, 520, 568, 854, 978, 1119
Alw26I GTCTC 3 cut(s) 220, 394, 734
Ama87I CYCGRG 1 cut(s) 103
AoxI GGCC 2 cut(s) 829, 995
ApeKI GCWGC 4 cut(s) 481, 524, 851, 869
ApoI RAATTY 4 cut(s) 16, 376, 640, 747
ArsI GACNNNNNNTTYG 2 cut(s) 547, 579
Asp700I GAANNNNTTC 1 cut(s) 1038
AspLEI GCGC 1 cut(s) 529
AspS9I GGNCC 1 cut(s) 830
AsuC2I CCSGG 1 cut(s) 205
AsuHPI GGTGA 1 cut(s) 357
AsuNHI GCTAGC 1 cut(s) 98
AvaI CYCGRG 1 cut(s) 103
BalI TGGCCA 1 cut(s) 997
BarI GAAGNNNNNNTAC 2 cut(s) 117, 149
BbvI GCAGC 4 cut(s) 493, 511, 863, 881
BccI CCATC 4 cut(s) 206, 575, 629, 951
BceAI ACGGC 1 cut(s) 844
BclI TGATCA 2 cut(s) 64, 700
BcnI CCSGG 1 cut(s) 205
BcoDI GTCTC 3 cut(s) 220, 394, 734
BfaI CTAG 3 cut(s) 99, 146, 302
BglII AGATCT 1 cut(s) 668
BisI GCNGC 4 cut(s) 482, 525, 852, 870
BlsI GCNGC 4 cut(s) 483, 526, 853, 871
Bme1390I CCNGG 1 cut(s) 205
BmeT110I CYCGRG 1 cut(s) 103
BmgT120I GGNCC 1 cut(s) 830
BmiI GGNNCC 2 cut(s) 426, 832
BmrFI CCNGG 1 cut(s) 205
BmrI ACTGGG 1 cut(s) 809
BmsI GCATC 1 cut(s) 629
BmtI GCTAGC 1 cut(s) 102
BmuI ACTGGG 1 cut(s) 809
BpmI CTGGAG 2 cut(s) 16, 1077
Bpu10I CCTNAGC 1 cut(s) 855
BpuMI CCSGG 1 cut(s) 205
BsaAI YACGTR 2 cut(s) 121, 186
BsaJI CCNNGG 2 cut(s) 900, 992
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 461, 772
Bse118I RCCGGY 2 cut(s) 416, 765
Bse1I ACTGG 4 cut(s) 6, 234, 562, 815
BseDI CCNNGG 2 cut(s) 900, 992
BseGI GGATG 2 cut(s) 725, 962
BseLI CCNNNNNNNGG 3 cut(s) 12, 461, 772
BseNI ACTGG 4 cut(s) 6, 234, 562, 815
BseRI GAGGAG 1 cut(s) 750
BseXI GCAGC 4 cut(s) 493, 511, 863, 881
BsgI GTGCAG 1 cut(s) 972
BshFI GGCC 2 cut(s) 831, 997
BsiHKCI CYCGRG 1 cut(s) 103
BsiSI CCGG 3 cut(s) 204, 417, 766
BslFI GGGAC 1 cut(s) 795
BslI CCNNNNNNNGG 3 cut(s) 12, 461, 772
BsmAI GTCTC 3 cut(s) 220, 394, 734
BsmBI CGTCTC 1 cut(s) 394
BsmFI GGGAC 1 cut(s) 795
BsnI GGCC 2 cut(s) 831, 997
BsoBI CYCGRG 1 cut(s) 103
Bsp143I GATC 3 cut(s) 64, 668, 700
BspACI CCGC 2 cut(s) 50, 602
BspANI GGCC 2 cut(s) 831, 997
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 2 cut(s) 426, 832
BspOI GCTAGC 1 cut(s) 102
BsrFI RCCGGY 2 cut(s) 416, 765
BsrI ACTGG 4 cut(s) 6, 234, 562, 815
BssAI RCCGGY 2 cut(s) 416, 765
BssECI CCNNGG 2 cut(s) 900, 992
BssMI GATC 3 cut(s) 64, 668, 700
BssT1I CCWWGG 2 cut(s) 900, 992
Bst4CI ACNGT 1 cut(s) 951
BstAPI GCANNNNNTGC 2 cut(s) 253, 1073
BstBAI YACGTR 2 cut(s) 121, 186
BstC8I GCNNGC 3 cut(s) 100, 522, 1117
BstDEI CTNAG 2 cut(s) 289, 855
BstF5I GGATG 2 cut(s) 725, 962
BstHHI GCGC 1 cut(s) 529
BstKTI GATC 3 cut(s) 67, 671, 703
BstMAI GTCTC 3 cut(s) 220, 394, 734
BstMBI GATC 3 cut(s) 64, 668, 700
BstMWI GCNNNNNNNGC 7 cut(s) 253, 323, 526, 533, 857, 866, 1073
BstNSI RCATGY 1 cut(s) 791
BstSCI CCNGG 1 cut(s) 203
BstV1I GCAGC 4 cut(s) 493, 511, 863, 881
BstX2I RGATCY 1 cut(s) 668
BstYI RGATCY 1 cut(s) 668
BsuRI GGCC 2 cut(s) 831, 997
BtsCI GGATG 2 cut(s) 725, 962
BtsIMutI CAGTG 1 cut(s) 576
Cac8I GCNNGC 3 cut(s) 100, 522, 1117
CciI TCATGA 1 cut(s) 910
CfoI GCGC 1 cut(s) 529
Cfr10I RCCGGY 2 cut(s) 416, 765
Cfr13I GGNCC 1 cut(s) 830
CseI GACGC 1 cut(s) 131
Csp6I GTAC 4 cut(s) 77, 187, 503, 720
CviAII CATG 6 cut(s) 86, 177, 244, 788, 911, 1022
CviQI GTAC 4 cut(s) 77, 187, 503, 720
DdeI CTNAG 2 cut(s) 289, 855
DpnI GATC 3 cut(s) 66, 670, 702
DpnII GATC 3 cut(s) 64, 668, 700
EaeI YGGCCR 1 cut(s) 995
Eco130I CCWWGG 2 cut(s) 900, 992
Eco57I CTGAAG 2 cut(s) 293, 867
Eco88I CYCGRG 1 cut(s) 103
EcoT14I CCWWGG 2 cut(s) 900, 992
ErhI CCWWGG 2 cut(s) 900, 992
Esp3I CGTCTC 1 cut(s) 394
FaeI CATG 6 cut(s) 89, 180, 247, 791, 914, 1025
FaqI GGGAC 1 cut(s) 795
FatI CATG 6 cut(s) 85, 176, 243, 787, 910, 1021
FauNDI CATATG 1 cut(s) 705
FbaI TGATCA 2 cut(s) 64, 700
Fnu4HI GCNGC 4 cut(s) 482, 525, 852, 870
FokI GGATG 2 cut(s) 712, 969
Fsp4HI GCNGC 4 cut(s) 482, 525, 852, 870
FspBI CTAG 3 cut(s) 99, 146, 302
GlaI GCGC 1 cut(s) 528
GluI GCNGC 4 cut(s) 482, 525, 852, 870
GsuI CTGGAG 2 cut(s) 16, 1077
HaeIII GGCC 2 cut(s) 831, 997
HapII CCGG 3 cut(s) 204, 417, 766
HgaI GACGC 1 cut(s) 131
HhaI GCGC 1 cut(s) 529
Hin1II CATG 6 cut(s) 89, 180, 247, 791, 914, 1025
Hin6I GCGC 1 cut(s) 527
HinP1I GCGC 1 cut(s) 527
HindIII AAGCTT 1 cut(s) 154
HinfI GANTC 2 cut(s) 676, 1097
HpaII CCGG 3 cut(s) 204, 417, 766
HphI GGTGA 1 cut(s) 357
Hpy166II GTNNAC 4 cut(s) 189, 503, 587, 881
Hpy188I TCNGA 3 cut(s) 625, 675, 826
Hpy188III TCNNGA 3 cut(s) 33, 845, 911
Hpy8I GTNNAC 4 cut(s) 189, 503, 587, 881
HpyAV CCTTC 1 cut(s) 856
HpyCH4III ACNGT 1 cut(s) 951
HpyCH4IV ACGT 3 cut(s) 120, 185, 1071
HpyCH4V TGCA 8 cut(s) 170, 180, 247, 256, 317, 653, 989, 1067
HpyF10VI GCNNNNNNNGC 7 cut(s) 253, 323, 526, 533, 857, 866, 1073
HpyF3I CTNAG 2 cut(s) 289, 855
HpySE526I ACGT 3 cut(s) 120, 185, 1071
Hsp92II CATG 6 cut(s) 89, 180, 247, 791, 914, 1025
HspAI GCGC 1 cut(s) 527
Ksp22I TGATCA 2 cut(s) 64, 700
Kzo9I GATC 3 cut(s) 64, 668, 700
LmnI GCTCC 3 cut(s) 215, 424, 541
Lsp1109I GCAGC 4 cut(s) 493, 511, 863, 881
LweI GCATC 1 cut(s) 629
MaeI CTAG 3 cut(s) 99, 146, 302
MaeII ACGT 3 cut(s) 120, 185, 1071
MaeIII GTNAC 1 cut(s) 439
MalI GATC 3 cut(s) 66, 670, 702
MboI GATC 3 cut(s) 64, 668, 700
MboII GAAGA 7 cut(s) 18, 62, 67, 286, 644, 935, 994
MfeI CAATTG 1 cut(s) 531
MflI RGATCY 1 cut(s) 668
MlsI TGGCCA 1 cut(s) 997
MluCI AATT 9 cut(s) 16, 131, 361, 376, 433, 531, 640, 747, 915
MluNI TGGCCA 1 cut(s) 997
Mox20I TGGCCA 1 cut(s) 997
MroXI GAANNNNTTC 1 cut(s) 1038
MscI TGGCCA 1 cut(s) 997
MseI TTAA 2 cut(s) 161, 753
Msp20I TGGCCA 1 cut(s) 997
MspA1I CMGCKG 1 cut(s) 568
MspI CCGG 3 cut(s) 204, 417, 766
MspR9I CCNGG 1 cut(s) 205
MunI CAATTG 1 cut(s) 531
MwoI GCNNNNNNNGC 7 cut(s) 253, 323, 526, 533, 857, 866, 1073
NciI CCSGG 1 cut(s) 205
NdeI CATATG 1 cut(s) 705
NdeII GATC 3 cut(s) 64, 668, 700
NheI GCTAGC 1 cut(s) 98
NlaIII CATG 6 cut(s) 89, 180, 247, 791, 914, 1025
NlaIV GGNNCC 2 cut(s) 426, 832
NspI RCATGY 1 cut(s) 791
PagI TCATGA 1 cut(s) 910
PdmI GAANNNNTTC 1 cut(s) 1038
PfeI GAWTC 2 cut(s) 676, 1097
PflMI CCANNNNNTGG 1 cut(s) 461
PkrI GCNGC 4 cut(s) 483, 526, 853, 871
Ppu21I YACGTR 2 cut(s) 121, 186
PspN4I GGNNCC 2 cut(s) 426, 832
PspPI GGNCC 1 cut(s) 830
PsuI RGATCY 1 cut(s) 668
PvuII CAGCTG 1 cut(s) 568
RsaI GTAC 4 cut(s) 78, 188, 504, 721
RsaNI GTAC 4 cut(s) 77, 187, 503, 720
SaqAI TTAA 2 cut(s) 161, 753
SatI GCNGC 4 cut(s) 482, 525, 852, 870
Sau3AI GATC 3 cut(s) 64, 668, 700
Sau96I GGNCC 1 cut(s) 830
ScrFI CCNGG 1 cut(s) 205
SfaNI GCATC 1 cut(s) 629
Sse9I AATT 9 cut(s) 16, 131, 361, 376, 433, 531, 640, 747, 915
SsiI CCGC 2 cut(s) 50, 602
SspMI CTAG 3 cut(s) 99, 146, 302
StyD4I CCNGG 1 cut(s) 203
StyI CCWWGG 2 cut(s) 900, 992
TaaI ACNGT 1 cut(s) 951
TaiI ACGT 3 cut(s) 123, 188, 1074
TaqI TCGA 1 cut(s) 553
TasI AATT 9 cut(s) 16, 131, 361, 376, 433, 531, 640, 747, 915
TfiI GAWTC 2 cut(s) 676, 1097
Tru1I TTAA 2 cut(s) 161, 753
Tru9I TTAA 2 cut(s) 161, 753
TscAI CASTG 1 cut(s) 583
TseI GCWGC 4 cut(s) 481, 524, 851, 869
TspDTI ATGAA 8 cut(s) 74, 165, 252, 927, 942, 971, 1010, 1047
TspGWI ACGGA 1 cut(s) 151
TspRI CASTG 1 cut(s) 583
Van91I CCANNNNNTGG 1 cut(s) 461
XapI RAATTY 4 cut(s) 16, 376, 640, 747
XceI RCATGY 1 cut(s) 791
XmnI GAANNNNTTC 1 cut(s) 1038
XspI CTAG 3 cut(s) 99, 146, 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.