Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0009992

Physical Location & Seq

Genomic Coordinates Reverse (-)

30998425 .. 31004100

Gene Structure 5676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g31160.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

ATGGACTCGGAAAGGCTCACACTTTCCCGAGAGAACCCTAGAATCGCTTTTTCCCCGCACGCCTCCGCCGACGGAAAGGCCATGCCCGGTACTGAGTTAGCTCAGAAGCCCCAGCCTCCGACTCCGATAGTCGACCGATTCAGGGCTCTGCTCAAGCAGCGGGAGGAGGACCTGAGGGTTTCGCCCGACGACGAGGTGTCGCCGCCCAGCACTGAGGAAATCGTCCACCTTTACGAGATGGTGTTGTCGGAACTTATCTTTAATTCGAAGCCCATCATTACCGATCTCACCATCATCGCCGGCGAGCAGAGAGACCATGGAAAGGGCATTGCTGACGCCATCTGCGCCCGGATTCTCGAGGTCCCGGTCGAGCATAAACTGCCTTCACTGTATCTTTTAGACAGTATTGTCAAGAATATTGGCCGAGAATATGCAAAGTTTTTCTCTTCCCGTCTTCCTGAGGTCTTTTGCGAGGCATACAGGCAAGTACACCCTAATCAGCATCCTGCCATGCGGCACCTCTTTGGCACCTGGTCAGCAGTGTTTCCACCCTCAGTCCTTCGCAGGATTGAAGAGCAACTGCAATTTTCTCCGCAAGTAAACCAACAAGCATCAGGATTAGCACCTTTGAGGACTTCTGAATCTCCTCGACCAACTCATGGCATCCATGTCAATCCAAAATATTTACGTCAGTTGGACAGCTCAACTGTGGATGGTGTTGGACCCCAAAGATTAAACTCAACAGGAAGTGTGAGCCATTCACCTTTTGCCATGGGGTCCAATCAGTTGCACCCACCTTCAACTGCTAGGCTTGCAAGATCATCTTCGCCTTCAAATATTGGGCTTGATGGGTCTTTGCCATCAGCAGTTGATGAATATGAAGCAGAACAGTCTCCAACAAGGTTTGTTGAGAGGTCTTCTCCATCTCATTCTGTGTTTGATTATAGACTTGGCGGAGCAGTGGGTAAAGATGAGGAGTCGAATGAATGGCGGAGAAATCGCTATCTTGATGGCAGTCAGAAGCGGTATGAGACTTCTGCTGCATATAATGGAGTTGAGCATCAGAACCCAAGAGCTTTAATTGACGCATATGGGAAAGACAGTGCGGATAGAAGTTTAAACAATAAGCCTCTGCTAGTTGGGCGGCTGGGCCTGAACGGTATAGATCGTAAGGCAACTCCAATGTCATGGCAGAATACTGAAGAGGAAGAGTTTGATTGGGAAGATGTGGCCCCAAATTTAGCAGACCATGGTAGGGGTAACGATTTCTTGGCCTCAACTGTATCGCCTTCTAGAAGCTACAGGGCAAGCCTTGGAACACAAAATGCAAGCTCCTTGGAGCCAGATGTTAGGAGTACTTGGTCTAGTCAGGCACATCCACCATCAGCTGAACAGTCCTCTATTATAGCTGAAGATCCAGTTCCCCCACTTGGTTTCGGTCGTGGATCATCGGGTGCTATGTCTCGATTTCAGTCTGAGACAAATCATAATCTGGGTTCTCGCTACCCTCAAGACACCTGGAATATGCCTTTTCATATTTCGCAGCCTTTGCAGAATCCCCTTAATGCCAAAGGAAGAGGAGGGAATATTCAGACGCCCTTTGTGACAGGCGGTATATATTCAGGTGGTGGGAAAATGTCTGCCTTTAGTGACAAGCTTCGAGATATTGATACACAACTTCATGGGCCCATTGCATCAAGAATGGGTTCCTCTAGTGTTGACTCTGTTACTGCTGACTCGAGATCTGGGATGCCAGTGTCAATGGGTTTAAGGCCTCCAGTAAACGTGCATAATTCTCACCCTCCTCCTGTGCACTCAGTTTTTGCAATGCAGAACCAGAGGAATCCGTATGGTTCAATAAATTATAGCAATACTGTAAAAAATCAAGGCCCATTTAATCCCTTATACATGCCGGAGCAGCAGTTAGATGGCTATGAAAACAAGGAGTCGAGGTCAACAAAGTCAACTCAGATGCCACAATATCGTCCCTTACAACCACAGTATCGTCCACGTCAGGAGGCACAGGAGAATATTTTTCCGTCTGCAGAAACTCAGGTGCCACCTTATTTAGGGGTACCACCCTTAAATCACGGATACGCTTTGCGAGGTCCCGTACCTCGTCAACATTTGGGCATACCAACCCCCTATAACCCAAATGGCACTTCGCAGTTCCCCTTGCCACCTCTACCACCAGGCCCCCCTCCTCCCTCGCAAGGCATACTTTCTGTCCAAAACCCTGGTTCAGTTGTCTCTGGCAACCAGTCCGGGAATGCATATTCTGGTTTGATTAGTTCTCTCATGGCTCAAGGTTTGATCTCATTGACAAATCAAAGCCCTGTCCAGGATTCTGTAGGAGTCGAGTTTAATGCCGACCTTCTCAAGGTGCGTCATGAATCTGTAATAAGTGCCCTATATGGTGATCTCCCTAGACAATGCACAACCTGTGGCCTTAGGTTCAAGTGCCAAGAAGAGCACAGTAGTCATATGGATTGGCATGTGACAAAGAATCGTATGTCTAAAAACCGCAAGCAGAAGCCCTCTCGCAAATGGTTTGTAAATACAAGCATGTGGCTCACTGGTGCGGAGGCATTGGGTACCGAGGCAGTCCCTGGATTTTTGCCTGCTGAGACTGTAGTAGAAAAGAAGAGTGAAGAAGAAATGGCTGTTCCTGCCGATGAGGATCAGAATTCGTGTGCATTATGTGGAGAGACTTTTGATGAATTTTATAGTGACGAGACAGAGGAATGGATGTATAAAGATGCTGTGTACTTGAATGCACCTGACGGAGCAACAGGAGGCATGGATAGGTCACAGTTAGGTCCTATTGTGCATGCTAAATGCAGATCCGAAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

952

Amino Acids

104.63

Weight (kDa)

5.99

Isoelectric Point (pI)

59.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04885
fragaria_vesca	FvH4_3g02510 FvH4_3g02510 FvH4_3g02510 FvH4_3g02510
malus_domestica	MD05G1342300.v1.1 MD10G1315900.v1.1
prunus_persica	Prupe.4G024700_v2.0.a1
pyrus_communis	pycom05g31160 pycom10g26810
rosa_chinensis	RchiOBHm_Chr5g0003821
rosa_laevigata	RLG00000031178
rosa_multiflora	Rmu_sc0004212.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072170
rosa_rugosa	Rorug04G0406900 Rorug04G0407000
rosa_samantha	Rh5AG034400 Rh5BG032700 Rh5CG036800 Rh5DG033100
rosa_wichuraiana	Rw5G003150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	407
Acc65I	GGTACC	2 cut(s)	2074, 2594
AccB1I	GGYRCC	5 cut(s)	516, 527, 2056, 2074, 2594
AccB7I	CCANNNNNTGG	1 cut(s)	659
AccI	GTMKAC	1 cut(s)	132
AclWI	GGATC	4 cut(s)	1409, 1453, 2688, 2838
AcoI	YGGCCR	1 cut(s)	421
AcsI	RAATTY	3 cut(s)	1237, 2686, 2720
AcuI	CTGAAG	2 cut(s)	1221, 1431
AcyI	GRCGYC	2 cut(s)	336, 1595
AfaI	GTAC	7 cut(s)	91, 489, 1357, 2076, 2115, 2596, 2768
AfiI	CCNNNNNNNGG	9 cut(s)	142, 322, 659, 1255, 1430, 2069, 2213, 2341, 2380
AgsI	TTSAA	6 cut(s)	572, 801, 834, 1857, 2458, 2773
AhdI	GACNNNNNGTC	1 cut(s)	196
AjiI	CACGTC	1 cut(s)	2012
AjnI	CCWGG	6 cut(s)	530, 1517, 2191, 2236, 2340, 2608
AjuI	GAANNNNNNNTTGG	2 cut(s)	2146, 2178
AluBI	AGCT	8 cut(s)	101, 702, 1076, 1299, 1332, 1388, 1409, 1657
AluI	AGCT	8 cut(s)	101, 702, 1076, 1299, 1332, 1388, 1409, 1657
Alw21I	GWGCWC	2 cut(s)	1815, 2475
Alw26I	GTCTC	9 cut(s)	306, 897, 1025, 1467, 1472, 2254, 2621, 2702, 2729
Alw44I	GTGCAC	1 cut(s)	1811
AlwI	GGATC	4 cut(s)	1409, 1453, 2688, 2838
AlwNI	CAGNNNCTG	1 cut(s)	2609
Ama87I	CYCGRG	3 cut(s)	27, 356, 1738
ApaI	GGGCCC	1 cut(s)	1689
ApaLI	GTGCAC	1 cut(s)	1811
ApeKI	GCWGC	4 cut(s)	157, 1040, 1543, 1918
ApoI	RAATTY	3 cut(s)	1237, 2686, 2720
Asp700I	GAANNNNTTC	1 cut(s)	1705
Asp718I	GGTACC	2 cut(s)	2074, 2594
AspLEI	GCGC	1 cut(s)	347
AsuC2I	CCSGG	4 cut(s)	87, 349, 365, 2266
AsuHPI	GGTGA	4 cut(s)	280, 753, 1790, 2429
AsuII	TTCGAA	1 cut(s)	266
AvaI	CYCGRG	3 cut(s)	27, 356, 1738
AvaII	GGWCC	6 cut(s)	169, 361, 722, 777, 2108, 2819
AxyI	CCTNAGG	3 cut(s)	173, 459, 2450
BaeGI	GKGCMC	3 cut(s)	1689, 1815, 2410
BaeI	ACNNNNGTAYC	2 cut(s)	1985, 2018
BanI	GGYRCC	5 cut(s)	516, 527, 2056, 2074, 2594
BanII	GRGCYC	2 cut(s)	148, 1689
BbsI	GAAGAC	2 cut(s)	446, 909
Bbv12I	GWGCWC	2 cut(s)	1815, 2475
BbvI	GCAGC	4 cut(s)	169, 1027, 1555, 1930
BcgI	CGANNNNNNTGC	2 cut(s)	2348, 2382
BciT130I	CCWGG	6 cut(s)	532, 1519, 2193, 2238, 2342, 2610
BciVI	GTATCC	1 cut(s)	2087
BcnI	CCSGG	4 cut(s)	87, 349, 365, 2266
BcoDI	GTCTC	9 cut(s)	306, 897, 1025, 1467, 1472, 2254, 2621, 2702, 2729
BfaI	CTAG	7 cut(s)	39, 807, 1136, 1293, 1365, 1713, 2427
BfmI	CTRYAG	4 cut(s)	1300, 2043, 2349, 2631
BfuI	GTATCC	1 cut(s)	2087
BglII	AGATCT	1 cut(s)	1742
BisI	GCNGC	7 cut(s)	158, 203, 515, 1041, 1145, 1544, 1919
BlsI	GCNGC	7 cut(s)	159, 204, 516, 1042, 1146, 1545, 1920
BmcAI	AGTACT	1 cut(s)	1357
Bme18I	GGWCC	6 cut(s)	169, 361, 722, 777, 2108, 2819
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	3 cut(s)	27, 356, 1738
BmgBI	CACGTC	1 cut(s)	2012
BmsI	GCATC	8 cut(s)	511, 620, 672, 1069, 1703, 1740, 1962, 2749
BpiI	GAAGAC	2 cut(s)	446, 909
BplI	GAGNNNNNCTC	2 cut(s)	904, 936
BpmI	CTGGAG	1 cut(s)	1761
Bpu14I	TTCGAA	1 cut(s)	266
BpuEI	CTTGAG	4 cut(s)	137, 1494, 2289, 2363
BpuMI	CCSGG	4 cut(s)	87, 349, 365, 2266
BsaBI	GATNNNNATC	1 cut(s)	2679
BsaHI	GRCGYC	2 cut(s)	336, 1595
BsaI	GGTCTC	1 cut(s)	306
BsaJI	CCNNGG	8 cut(s)	316, 771, 1249, 1312, 1335, 2236, 2598, 2608
BsaXI	ACNNNNNCTCC	4 cut(s)	1907, 1937, 1937, 1967
Bsc4I	CCNNNNNNNGG	9 cut(s)	142, 322, 659, 1255, 1430, 2069, 2213, 2341, 2380
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	5 cut(s)	1418, 1754, 1778, 2260, 2581
Bse21I	CCTNAGG	3 cut(s)	173, 459, 2450
Bse3DI	GCAATG	3 cut(s)	327, 1689, 1833
Bse8I	GATNNNNATC	1 cut(s)	2679
BseBI	CCWGG	6 cut(s)	532, 1519, 2193, 2238, 2342, 2610
BseDI	CCNNGG	8 cut(s)	316, 771, 1249, 1312, 1335, 2236, 2598, 2608
BseGI	GGATG	6 cut(s)	502, 663, 718, 1375, 1755, 2754
BseJI	GATNNNNATC	1 cut(s)	2679
BseLI	CCNNNNNNNGG	9 cut(s)	142, 322, 659, 1255, 1430, 2069, 2213, 2341, 2380
BseMI	GCAATG	3 cut(s)	327, 1689, 1833
BseNI	ACTGG	5 cut(s)	1418, 1754, 1778, 2260, 2581
BseRI	GAGGAG	6 cut(s)	179, 636, 989, 1593, 1794, 2193
BseSI	GKGCMC	3 cut(s)	1689, 1815, 2410
BseXI	GCAGC	4 cut(s)	169, 1027, 1555, 1930
BseYI	CCCAGC	3 cut(s)	111, 206, 1147
Bsh1285I	CGRYCG	3 cut(s)	136, 369, 1441
BshNI	GGYRCC	5 cut(s)	516, 527, 2056, 2074, 2594
BsiEI	CGRYCG	3 cut(s)	136, 369, 1441
BsiHKAI	GWGCWC	2 cut(s)	1815, 2475
BsiHKCI	CYCGRG	3 cut(s)	27, 356, 1738
BsiSI	CCGG	6 cut(s)	87, 300, 349, 365, 1913, 2265
BslFI	GGGAC	4 cut(s)	347, 1971, 2094, 2591
BslI	CCNNNNNNNGG	9 cut(s)	142, 322, 659, 1255, 1430, 2069, 2213, 2341, 2380
BsmAI	GTCTC	9 cut(s)	306, 897, 1025, 1467, 1472, 2254, 2621, 2702, 2729
BsmFI	GGGAC	4 cut(s)	347, 1971, 2094, 2591
BsmI	GAATGC	2 cut(s)	2275, 2779
Bso31I	GGTCTC	1 cut(s)	306
BsoBI	CYCGRG	3 cut(s)	27, 356, 1738
Bsp119I	TTCGAA	1 cut(s)	266
Bsp120I	GGGCCC	1 cut(s)	1685
Bsp1286I	GDGCHC	5 cut(s)	148, 1689, 1815, 2410, 2475
Bsp19I	CCATGG	3 cut(s)	316, 771, 1249
BspHI	TCATGA	1 cut(s)	2389
BspMAI	CTGCAG	1 cut(s)	2047
BspPI	GGATC	4 cut(s)	1409, 1453, 2688, 2838
BspQI	GCTCTTC	2 cut(s)	567, 2463
BspT104I	TTCGAA	1 cut(s)	266
BspT107I	GGYRCC	5 cut(s)	516, 527, 2056, 2074, 2594
BspTNI	GGTCTC	1 cut(s)	306
BsrDI	GCAATG	3 cut(s)	327, 1689, 1833
BsrFI	RCCGGY	1 cut(s)	299
BsrI	ACTGG	5 cut(s)	1418, 1754, 1778, 2260, 2581
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	8 cut(s)	316, 771, 1249, 1312, 1335, 2236, 2598, 2608
BssNI	GRCGYC	2 cut(s)	336, 1595
BssT1I	CCWWGG	5 cut(s)	316, 771, 1249, 1312, 1335
Bst2UI	CCWGG	6 cut(s)	532, 1519, 2193, 2238, 2342, 2610
Bst6I	CTCTTC	7 cut(s)	451, 567, 1197, 1203, 1570, 2463, 2639
BstACI	GRCGYC	2 cut(s)	336, 1595
BstAPI	GCANNNNNTGC	2 cut(s)	379, 1549
BstBI	TTCGAA	1 cut(s)	266
BstC8I	GCNNGC	9 cut(s)	60, 301, 305, 813, 1309, 1330, 2528, 2622, 2832
BstDSI	CCRYGG	3 cut(s)	316, 771, 1249
BstENI	CCTNNNNNAGG	2 cut(s)	2067, 2378
BstF5I	GGATG	6 cut(s)	502, 663, 718, 1375, 1755, 2754
BstHHI	GCGC	1 cut(s)	347
BstMAI	GTCTC	9 cut(s)	306, 897, 1025, 1467, 1472, 2254, 2621, 2702, 2729
BstMCI	CGRYCG	3 cut(s)	136, 369, 1441
BstMWI	GCNNNNNNNGC	8 cut(s)	157, 344, 379, 812, 1141, 1549, 1918, 2669
BstNI	CCWGG	6 cut(s)	532, 1519, 2193, 2238, 2342, 2610
BstNSI	RCATGY	4 cut(s)	1912, 2498, 2569, 2834
BstSFI	CTRYAG	4 cut(s)	1300, 2043, 2349, 2631
BstSLI	GKGCMC	3 cut(s)	1689, 1815, 2410
BstV1I	GCAGC	4 cut(s)	169, 1027, 1555, 1930
BstV2I	GAAGAC	2 cut(s)	446, 909
BstX2I	RGATCY	3 cut(s)	1414, 1742, 2843
BstXI	CCANNNNNNTGG	2 cut(s)	1188, 2237
BstYI	RGATCY	3 cut(s)	1414, 1742, 2843
Bsu36I	CCTNAGG	3 cut(s)	173, 459, 2450
BsuI	GTATCC	1 cut(s)	2087
BtgI	CCRYGG	3 cut(s)	316, 771, 1249
BtgZI	GCGATG	1 cut(s)	280
BtrI	CACGTC	1 cut(s)	2012
BtsCI	GGATG	6 cut(s)	502, 663, 718, 1375, 1755, 2754
BtsI	GCAGTG	2 cut(s)	546, 966
BtsIMutI	CAGTG	7 cut(s)	210, 386, 546, 966, 1108, 1761, 2574
Cac8I	GCNNGC	9 cut(s)	60, 301, 305, 813, 1309, 1330, 2528, 2622, 2832
CaiI	CAGNNNCTG	1 cut(s)	2609
CciI	TCATGA	1 cut(s)	2389
CfoI	GCGC	1 cut(s)	347
Cfr10I	RCCGGY	1 cut(s)	299
CseI	GACGC	4 cut(s)	344, 1094, 1603, 2375
CsiI	ACCWGGT	1 cut(s)	530
Csp6I	GTAC	7 cut(s)	90, 488, 1356, 2075, 2114, 2595, 2767
CviQI	GTAC	7 cut(s)	90, 488, 1356, 2075, 2114, 2595, 2767
DraI	TTTAAA	1 cut(s)	1119
DrdI	GACNNNNNNGTC	1 cut(s)	407
DriI	GACNNNNNGTC	1 cut(s)	196
DseDI	GACNNNNNNGTC	1 cut(s)	407
EaeI	YGGCCR	1 cut(s)	421
Eam1104I	CTCTTC	7 cut(s)	451, 567, 1197, 1203, 1570, 2463, 2639
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	7 cut(s)	451, 567, 1197, 1203, 1570, 2463, 2639
EciI	GGCGGA	3 cut(s)	55, 969, 1006
Eco130I	CCWWGG	5 cut(s)	316, 771, 1249, 1312, 1335
Eco147I	AGGCCT	1 cut(s)	1774
Eco24I	GRGCYC	2 cut(s)	148, 1689
Eco31I	GGTCTC	1 cut(s)	306
Eco47I	GGWCC	6 cut(s)	169, 361, 722, 777, 2108, 2819
Eco57I	CTGAAG	2 cut(s)	1221, 1431
Eco81I	CCTNAGG	3 cut(s)	173, 459, 2450
Eco88I	CYCGRG	3 cut(s)	27, 356, 1738
EcoNI	CCTNNNNNAGG	2 cut(s)	2067, 2378
EcoO109I	RGGNCCY	5 cut(s)	169, 361, 2108, 2195, 2819
EcoRI	GAATTC	1 cut(s)	2686
EcoRII	CCWGG	6 cut(s)	530, 1517, 2191, 2236, 2340, 2608
EcoT14I	CCWWGG	5 cut(s)	316, 771, 1249, 1312, 1335
EcoT22I	ATGCAT	1 cut(s)	2275
EcoT38I	GRGCYC	2 cut(s)	148, 1689
ErhI	CCWWGG	5 cut(s)	316, 771, 1249, 1312, 1335
FalI	AAGNNNNNCTT	4 cut(s)	808, 840, 2205, 2237
FaqI	GGGAC	4 cut(s)	347, 1971, 2094, 2591
FauI	CCCGC	2 cut(s)	63, 153
FauNDI	CATATG	2 cut(s)	1090, 2484
FblI	GTMKAC	1 cut(s)	132
Fnu4HI	GCNGC	7 cut(s)	158, 203, 515, 1041, 1145, 1544, 1919
FokI	GGATG	6 cut(s)	489, 650, 725, 1362, 1762, 2761
FriOI	GRGCYC	2 cut(s)	148, 1689
Fsp4HI	GCNGC	7 cut(s)	158, 203, 515, 1041, 1145, 1544, 1919
FspBI	CTAG	7 cut(s)	39, 807, 1136, 1293, 1365, 1713, 2427
GlaI	GCGC	1 cut(s)	346
GluI	GCNGC	7 cut(s)	158, 203, 515, 1041, 1145, 1544, 1919
GsaI	CCCAGC	3 cut(s)	115, 210, 1151
GsuI	CTGGAG	1 cut(s)	1761
HapII	CCGG	6 cut(s)	87, 300, 349, 365, 1913, 2265
HgaI	GACGC	4 cut(s)	344, 1094, 1603, 2375
HhaI	GCGC	1 cut(s)	347
Hin1I	GRCGYC	2 cut(s)	336, 1595
Hin6I	GCGC	1 cut(s)	345
HinP1I	GCGC	1 cut(s)	345
HincII	GTYRAC	5 cut(s)	133, 1720, 1956, 1965, 2123
HindII	GTYRAC	5 cut(s)	133, 1720, 1956, 1965, 2123
HindIII	AAGCTT	1 cut(s)	1655
HpaII	CCGG	6 cut(s)	87, 300, 349, 365, 1913, 2265
HphI	GGTGA	4 cut(s)	280, 753, 1790, 2429
Hpy99I	CGWCG	3 cut(s)	74, 191, 194
HpyAV	CCTTC	7 cut(s)	393, 569, 807, 840, 1299, 2384, 2843
HpyCH4IV	ACGT	3 cut(s)	688, 1785, 2011
HpyF10VI	GCNNNNNNNGC	8 cut(s)	157, 344, 379, 812, 1141, 1549, 1918, 2669
HpySE526I	ACGT	3 cut(s)	688, 1785, 2011
Hsp92I	GRCGYC	2 cut(s)	336, 1595
HspAI	GCGC	1 cut(s)	345
KpnI	GGTACC	2 cut(s)	2078, 2598
KroI	GCCGGC	1 cut(s)	299
KroNI	GCCGGC	1 cut(s)	301
LguI	GCTCTTC	2 cut(s)	567, 2463
LmnI	GCTCC	5 cut(s)	956, 1337, 1339, 1915, 2786
Lsp1109I	GCAGC	4 cut(s)	169, 1027, 1555, 1930
LweI	GCATC	8 cut(s)	511, 620, 672, 1069, 1703, 1740, 1962, 2749
MabI	ACCWGGT	1 cut(s)	530
MaeI	CTAG	7 cut(s)	39, 807, 1136, 1293, 1365, 1713, 2427
MaeII	ACGT	3 cut(s)	688, 1785, 2011
MaeIII	GTNAC	7 cut(s)	1259, 1603, 1649, 1726, 2497, 2729, 2808
MflI	RGATCY	3 cut(s)	1414, 1742, 2843
MhlI	GDGCHC	5 cut(s)	148, 1689, 1815, 2410, 2475
MluCI	AATT	8 cut(s)	262, 584, 1080, 1237, 1792, 1861, 2686, 2720
MlyI	GAGTC	6 cut(s)	115, 986, 1715, 1730, 1955, 2364
MmeI	TCCRAC	5 cut(s)	143, 228, 675, 700, 920
Mph1103I	ATGCAT	1 cut(s)	2275
MreI	CGCCGGCG	1 cut(s)	299
MroNI	GCCGGC	1 cut(s)	299
MroXI	GAANNNNTTC	1 cut(s)	1705
MseI	TTAA	9 cut(s)	261, 734, 1079, 1118, 1563, 1769, 1896, 2084, 2364
MspA1I	CMGCKG	2 cut(s)	160, 1388
MspI	CCGG	6 cut(s)	87, 300, 349, 365, 1913, 2265
MssI	GTTTAAAC	1 cut(s)	1119
Mva1269I	GAATGC	2 cut(s)	2275, 2779
MvaI	CCWGG	6 cut(s)	532, 1519, 2193, 2238, 2342, 2610
MwoI	GCNNNNNNNGC	8 cut(s)	157, 344, 379, 812, 1141, 1549, 1918, 2669
NaeI	GCCGGC	1 cut(s)	301
NciI	CCSGG	4 cut(s)	87, 349, 365, 2266
NcoI	CCATGG	3 cut(s)	316, 771, 1249
NdeI	CATATG	2 cut(s)	1090, 2484
NgoMIV	GCCGGC	1 cut(s)	299
NmeAIII	GCCGAG	1 cut(s)	449
NmuCI	GTSAC	5 cut(s)	1603, 1649, 2497, 2729, 2808
NsiI	ATGCAT	1 cut(s)	2275
NspI	RCATGY	4 cut(s)	1912, 2498, 2569, 2834
NspV	TTCGAA	1 cut(s)	266
PaeI	GCATGC	1 cut(s)	2834
PaeR7I	CTCGAG	2 cut(s)	356, 1738
PagI	TCATGA	1 cut(s)	2389
PceI	AGGCCT	1 cut(s)	1774
PciSI	GCTCTTC	2 cut(s)	567, 2463
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PctI	GAATGC	2 cut(s)	2275, 2779
PdiI	GCCGGC	1 cut(s)	301
PdmI	GAANNNNTTC	1 cut(s)	1705
PfeI	GAWTC	9 cut(s)	42, 138, 352, 641, 1555, 1843, 2345, 2393, 2506
PflMI	CCANNNNNTGG	1 cut(s)	659
PfoI	TCCNGGA	2 cut(s)	2264, 2340
PkrI	GCNGC	7 cut(s)	159, 204, 516, 1042, 1146, 1545, 1920
PleI	GAGTC	6 cut(s)	115, 985, 1715, 1730, 1954, 2363
PmeI	GTTTAAAC	1 cut(s)	1119
PpsI	GAGTC	6 cut(s)	115, 985, 1715, 1730, 1954, 2363
PpuMI	RGGWCCY	4 cut(s)	169, 361, 2108, 2819
Psp5II	RGGWCCY	4 cut(s)	169, 361, 2108, 2819
Psp6I	CCWGG	6 cut(s)	530, 1517, 2191, 2236, 2340, 2608
PspFI	CCCAGC	3 cut(s)	111, 206, 1147
PspGI	CCWGG	6 cut(s)	530, 1517, 2191, 2236, 2340, 2608
PspOMI	GGGCCC	1 cut(s)	1685
PspPPI	RGGWCCY	4 cut(s)	169, 361, 2108, 2819
PstI	CTGCAG	1 cut(s)	2047
PstNI	CAGNNNCTG	1 cut(s)	2609
PsuI	RGATCY	3 cut(s)	1414, 1742, 2843
PvuII	CAGCTG	1 cut(s)	1388
RsaI	GTAC	7 cut(s)	91, 489, 1357, 2076, 2115, 2596, 2768
RsaNI	GTAC	7 cut(s)	90, 488, 1356, 2075, 2114, 2595, 2767
SalI	GTCGAC	1 cut(s)	131
SapI	GCTCTTC	2 cut(s)	567, 2463
SaqAI	TTAA	9 cut(s)	261, 734, 1079, 1118, 1563, 1769, 1896, 2084, 2364
SatI	GCNGC	7 cut(s)	158, 203, 515, 1041, 1145, 1544, 1919
ScaI	AGTACT	1 cut(s)	1357
SchI	GAGTC	6 cut(s)	115, 986, 1715, 1730, 1955, 2364
SduI	GDGCHC	5 cut(s)	148, 1689, 1815, 2410, 2475
SexAI	ACCWGGT	1 cut(s)	530
SfaNI	GCATC	8 cut(s)	511, 620, 672, 1069, 1703, 1740, 1962, 2749
SfcI	CTRYAG	4 cut(s)	1300, 2043, 2349, 2631
Sfr274I	CTCGAG	2 cut(s)	356, 1738
SfuI	TTCGAA	1 cut(s)	266
SgrAI	CRCCGGYG	1 cut(s)	299
SinI	GGWCC	6 cut(s)	169, 361, 722, 777, 2108, 2819
SlaI	CTCGAG	2 cut(s)	356, 1738
SmlI	CTYRAG	6 cut(s)	152, 356, 1509, 1738, 2304, 2378
SmoI	CTYRAG	6 cut(s)	152, 356, 1509, 1738, 2304, 2378
SphI	GCATGC	1 cut(s)	2834
Sse9I	AATT	8 cut(s)	262, 584, 1080, 1237, 1792, 1861, 2686, 2720
SseBI	AGGCCT	1 cut(s)	1774
SspI	AATATT	5 cut(s)	418, 683, 838, 1588, 2032
SspMI	CTAG	7 cut(s)	39, 807, 1136, 1293, 1365, 1713, 2427
StuI	AGGCCT	1 cut(s)	1774
StyI	CCWWGG	5 cut(s)	316, 771, 1249, 1312, 1335
TaiI	ACGT	3 cut(s)	691, 1788, 2014
TaqII	GACCGA	2 cut(s)	150, 1427
TasI	AATT	8 cut(s)	262, 584, 1080, 1237, 1792, 1861, 2686, 2720
TatI	WGTACW	3 cut(s)	487, 1355, 2766
TauI	GCSGC	3 cut(s)	205, 517, 1147
TfiI	GAWTC	9 cut(s)	42, 138, 352, 641, 1555, 1843, 2345, 2393, 2506
Tru1I	TTAA	9 cut(s)	261, 734, 1079, 1118, 1563, 1769, 1896, 2084, 2364
Tru9I	TTAA	9 cut(s)	261, 734, 1079, 1118, 1563, 1769, 1896, 2084, 2364
TscAI	CASTG	7 cut(s)	217, 393, 546, 966, 1108, 1761, 2581
TseFI	GTSAC	5 cut(s)	1603, 1649, 2497, 2729, 2808
TseI	GCWGC	4 cut(s)	157, 1040, 1543, 1918
Tsp45I	GTSAC	5 cut(s)	1603, 1649, 2497, 2729, 2808
TspDTI	ATGAA	8 cut(s)	888, 894, 999, 1523, 1670, 1950, 2406, 2733
TspGWI	ACGGA	5 cut(s)	87, 1836, 2028, 2106, 2799
TspRI	CASTG	7 cut(s)	217, 393, 546, 966, 1108, 1761, 2581
Van91I	CCANNNNNTGG	1 cut(s)	659
VneI	GTGCAC	1 cut(s)	1811
VpaK11BI	GGWCC	6 cut(s)	169, 361, 722, 777, 2108, 2819
XagI	CCTNNNNNAGG	2 cut(s)	2067, 2378
XapI	RAATTY	3 cut(s)	1237, 2686, 2720
XbaI	TCTAGA	1 cut(s)	1292
XceI	RCATGY	4 cut(s)	1912, 2498, 2569, 2834
XhoI	CTCGAG	2 cut(s)	356, 1738
XmiI	GTMKAC	1 cut(s)	132
XmnI	GAANNNNTTC	1 cut(s)	1705
XspI	CTAG	7 cut(s)	39, 807, 1136, 1293, 1365, 1713, 2427
ZrmI	AGTACT	1 cut(s)	1357
Zsp2I	ATGCAT	1 cut(s)	2275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.