Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0009992

Physical Location & Seq

Genomic Coordinates Reverse (-)

28008209 .. 28013294

Gene Structure 5086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g26810.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2904 bp

ATGGACTCGGAAAGGCTCACACTTTCCCGAGAAAACCCTAGAGTCGCTTTTTCCCCGCACACCGCTGGAAAGGCCATGCCCGGTTCTGAGTTGGCTCAGAAGCCCCAGCCTCCGACTCCGATAGTGGACCGATTCAGGGCTCTGCTCAAGCAGCGGGAGGAGGACCTCAGGGTTTCGCCCGACGACGAGGTTTCGCCGCCCAGCACCGAAGAAATCGTCCATCTTTACGAGATTGTATTGTCGGAGCTCATCTTTAATTCGAAGCCCATCATTACCGATCTCACCATCATCGCCGGCGAACAGAGAGACCACGGAAAGGGCATCGCCAACGCCATCTGCGCCCGCATTCTCGAGGTCCCGGTTGAGCATAAACTGCCTTCACTGTATCTTTTAGACAGTATTGTCAAGAATATTGGCCGAGAATATGCCAAGTTTCTCTCTTCCCGTCTTCCTGAGGTCTTTTGCGAGGCATACAGGCAAGTACACCCTAATCAGCACCCTGCCATGCGCCACCTCTTTGGCACTTGGTCAGCAGTATTTCCACCTTCAGTCCTTCGCAGGATCGAAGAGCAACTGCAATTTTCTCCGCAAGCAAACCAACAATCATCAGGATTACCACCTTTGAGGACTTCTGAATCTCCTCGACCAGCTCATGGCATCCATGTCAATCCAAAATATTTGCGTCAGTTGGACAGTTCAGATGTAGATGGTGTTGTATCCCAAAGATTTAACTCAACAGGAAGTGTGAGTCATTCACCTTTTGCCCTGGGGTCCAATCAATTACACCCATCTTCAACTGCTAGGCTTGCAAGATCTTCGTCGCCTTCTAATATTGGGCTTGATAGGTCTTTGCCATCAGCAGTTGATGAATATGCAGCAGAACAGTCTCCAAGAAGGTTTGTTGAGAGGTCTTCTCCATCTAATTCCGTGTTTGATTATAGACTTGGTGGAGCAATGGGTAAAGATGAGGAGTCGAATGAATGGCGGAGAAAACGCTATCTTGATGGTAGTCAGAAGCGGTTTGATACTTCTGCTGCATATAATGGAGTTGACCATCCGAACCCAAGAGCTTTAATTGACGCATATGGGAAGGACAGTGCAGATAGAAGTTTAAATGATAAGCCTCTGCTGGTTGGGCGGCTGGGCCTGAACGGTCTAGATCATAAGGCAACTCCAATGTCATGGCAGAATACTGAGGAGGAAGAGTTTGACTGGGAAGATATGACCCCAAATTTAGCAGACCATGGTCAGGGTAACGATTTCATGGCTTCAACTGTACCGCCTTCTAGAAGCTACAAGGCAAGCCATGGAACACAGAATGCAAGCTCCTTGGAGCCAGATGTTAGGAGTACTTGGTCTAGTCAGGCACATCCACCTTCAGCCGAACAGTCCTCTATTATAGCTGAAGATTCAGTTCCCCCACTTGGTTTCGGTCATGGATCATCGGGTGCTGTGTCTCGATTTCAGTCTGAGAAAAATCATAATCTGGGTTCTCGCTACCCTCAAGAAGCCTGGAATATGCCTTTCCATCACTTGCAGCCTTTGCTGAATCCCCTTAATGCCAAAGGAAGAGGAGGGAATATTCAGACGCCCTTTGTGACAAGCGGTATATCTTCAGGTGGTGAGAAAATGTCTGCCTTTAATGACAAGCTTCTAGATGTTGATACACGACTTCATGGGCCCATTACATCAAGAATGGGTTCCTCTAGTGTTCACTCTGTTACTGCTGACTCTCGATCTGTGATGCCAGTGTCAATGGGTTTAAGGCCTCCAGTAAACGTGCATAATTCTCACCCTCCCCAAGTGCACTCAGTTTTTGCAATGCAGAACCAGAGGAATCTGTACGGTTCAATAAATTATAGCAATACTGTAAAAAATCAAGGCCCATATAATCCTTTATGCCTGCCGGAGCAGCAGTTAGATGGCTATGAAAACAAGGAGTCAAGATCGACAAAGTCAACTCAGGTGCCACAATATCGTCCCTTACAACCACAGTATCGTCCACCTCAGGAGGCACGGGAGAATATTTTTTCATCTGCAGAAACTCAGGTGCCATCTTATTTAGGGGTACCACCCTTAAATCACGGATACACTTTGCGAGGTCCCGTACCTCGTCAACACTTGGGCATACCAACCCCCTATAACCCAAATGGCAGTTCGCAGTTCTCCTTGCCACCTCTACCACCAGGTCCCCCTCCCTCGCAAGGCATACTTTCCGTCCAAAACCCTGGTTCAGTTGTCTCTAGCAATCAGCCCGGCAATGCCTATTCTGGTTTGATTAGTTCTCTCATGGCTCAAGGTTTGATCTCATTGACAAATCAAAGCCCTGTCCAGGATTCTGTAGGAGTCGAATTTAATGCCGACCTTCTCAAGGTGCGTCATGAATCTGTAATAAGTGCCCTATATGGTGATCTCCCTAGACAATGCACAACCTGTGGCCTTAGGTTCAAGTGCCAAGAAGAGCACAGTAGTCATATGGATTGGCATGTAACAAAGAATCGCATGTCTAAAAACCGCAAGCAGAAGCCCTCTCGCAAATGGTTTGTAAATACAAGTATGTGGCTCACTGGTGCAGAGGCATTGGGTACTGAGGCAGTCCCTGGATTTTTGCCTGCTGAGACCATAGTGGAAAAGAAGAGTGATGAAGAAATGGCTGTTCCTGCCGATGAGGATCAGAATTCGTGTGCATTATGTGGAGAGACTTTTGATGACTTTTATAGTGATGAGAATGAAGAGTGGATGTATAAAGATGCTGTGTACATGAATGCACCTGACGGAGCAACAGGAGGCATGGATAGGTCACAATTAGGTCCTATTGTGCATGCTAAATGCAGATCCGAGTCAAGTGTGGTCTCCCCTGAAGGTTTTGGACAAGATCAAGGGGTACATCTCCACTTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

968

Amino Acids

106.51

Weight (kDa)

6.11

Isoelectric Point (pI)

60.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04885
fragaria_vesca	FvH4_3g02510 FvH4_3g02510 FvH4_3g02510 FvH4_3g02510
malus_domestica	MD05G1342300.v1.1 MD10G1315900.v1.1
prunus_persica	Prupe.4G024700_v2.0.a1
pyrus_communis	pycom05g31160 pycom10g26810
rosa_chinensis	RchiOBHm_Chr5g0003821
rosa_laevigata	RLG00000031178
rosa_multiflora	Rmu_sc0004212.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072170
rosa_rugosa	Rorug04G0406900 Rorug04G0407000
rosa_samantha	Rh5AG034400 Rh5BG032700 Rh5CG036800 Rh5DG033100
rosa_wichuraiana	Rw5G003150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	401
Acc65I	GGTACC	1 cut(s)	2068
AccB1I	GGYRCC	3 cut(s)	1966, 2050, 2068
AccB7I	CCANNNNNTGG	1 cut(s)	653
AclWI	GGATC	4 cut(s)	569, 1447, 2679, 2829
AcoI	YGGCCR	1 cut(s)	415
AcsI	RAATTY	3 cut(s)	1231, 2351, 2677
AcuI	CTGAAG	5 cut(s)	531, 1362, 1425, 1599, 2880
AcyI	GRCGYC	1 cut(s)	1589
AfaI	GTAC	9 cut(s)	483, 1278, 1351, 1844, 2070, 2109, 2587, 2759, 2886
AfiI	CCNNNNNNNGG	8 cut(s)	136, 316, 653, 1249, 1424, 2204, 2332, 2371
AgsI	TTSAA	4 cut(s)	795, 1272, 1851, 2449
AjnI	CCWGG	6 cut(s)	765, 1511, 2185, 2227, 2331, 2599
AjuI	GAANNNNNNNTTGG	2 cut(s)	2140, 2172
AluBI	AGCT	7 cut(s)	247, 650, 1070, 1293, 1326, 1403, 1651
AluI	AGCT	7 cut(s)	247, 650, 1070, 1293, 1326, 1403, 1651
Alw21I	GWGCWC	3 cut(s)	249, 1809, 2466
Alw26I	GTCTC	7 cut(s)	300, 891, 1461, 2245, 2612, 2693, 2857
Alw44I	GTGCAC	1 cut(s)	1805
AlwI	GGATC	4 cut(s)	569, 1447, 2679, 2829
AlwNI	CAGNNNCTG	1 cut(s)	2600
Ama87I	CYCGRG	2 cut(s)	27, 350
AoxI	GGCC	7 cut(s)	72, 415, 1144, 1679, 1766, 1882, 2437
ApaI	GGGCCC	1 cut(s)	1683
ApaLI	GTGCAC	1 cut(s)	1805
ApeKI	GCWGC	5 cut(s)	151, 875, 1034, 1537, 1912
ApoI	RAATTY	3 cut(s)	1231, 2351, 2677
ArsI	GACNNNNNNTTYG	2 cut(s)	201, 233
Asp700I	GAANNNNTTC	1 cut(s)	1699
Asp718I	GGTACC	1 cut(s)	2068
AspLEI	GCGC	2 cut(s)	341, 510
AsuC2I	CCSGG	3 cut(s)	81, 359, 2256
AsuHPI	GGTGA	5 cut(s)	274, 747, 1634, 1784, 2420
AsuII	TTCGAA	1 cut(s)	260
AvaI	CYCGRG	2 cut(s)	27, 350
AvaII	GGWCC	7 cut(s)	127, 163, 355, 771, 2102, 2189, 2810
AxyI	CCTNAGG	4 cut(s)	167, 453, 2007, 2441
BaeGI	GKGCMC	3 cut(s)	1683, 1809, 2401
BaeI	ACNNNNGTAYC	2 cut(s)	1979, 2012
BanI	GGYRCC	3 cut(s)	1966, 2050, 2068
BanII	GRGCYC	3 cut(s)	142, 249, 1683
BbsI	GAAGAC	2 cut(s)	440, 903
Bbv12I	GWGCWC	3 cut(s)	249, 1809, 2466
BbvI	GCAGC	5 cut(s)	163, 887, 1021, 1549, 1924
BcgI	CGANNNNNNTGC	4 cut(s)	798, 832, 2339, 2373
BciT130I	CCWGG	6 cut(s)	767, 1513, 2187, 2229, 2333, 2601
BciVI	GTATCC	2 cut(s)	727, 2081
BcnI	CCSGG	3 cut(s)	81, 359, 2256
BcoDI	GTCTC	7 cut(s)	300, 891, 1461, 2245, 2612, 2693, 2857
BfaI	CTAG	9 cut(s)	39, 801, 1157, 1287, 1359, 1655, 1707, 2244, 2418
BfmI	CTRYAG	2 cut(s)	2037, 2340
BfuI	GTATCC	2 cut(s)	727, 2081
BglII	AGATCT	1 cut(s)	812
BisI	GCNGC	7 cut(s)	152, 197, 876, 1035, 1139, 1538, 1913
BlsI	GCNGC	7 cut(s)	153, 198, 877, 1036, 1140, 1539, 1914
BmcAI	AGTACT	1 cut(s)	1351
Bme1390I	CCNGG	9 cut(s)	81, 359, 767, 1513, 2187, 2229, 2256, 2333, 2601
Bme18I	GGWCC	7 cut(s)	127, 163, 355, 771, 2102, 2189, 2810
BmeT110I	CYCGRG	2 cut(s)	27, 350
BmrFI	CCNGG	9 cut(s)	81, 359, 767, 1513, 2187, 2229, 2256, 2333, 2601
BmrI	ACTGGG	1 cut(s)	1222
BmsI	GCATC	4 cut(s)	330, 666, 1734, 2740
BmuI	ACTGGG	1 cut(s)	1222
BoxI	GACNNNNGTC	1 cut(s)	1245
BpiI	GAAGAC	2 cut(s)	440, 903
BplI	GAGNNNNNCTC	2 cut(s)	898, 930
BpmI	CTGGAG	1 cut(s)	1755
Bpu14I	TTCGAA	1 cut(s)	260
BpuEI	CTTGAG	4 cut(s)	131, 1488, 2280, 2354
BpuMI	CCSGG	3 cut(s)	81, 359, 2256
BsaBI	GATNNNNATC	1 cut(s)	2670
BsaHI	GRCGYC	1 cut(s)	1589
BsaI	GGTCTC	3 cut(s)	300, 2612, 2857
BsaJI	CCNNGG	8 cut(s)	310, 765, 766, 1243, 1306, 1329, 2227, 2599
BsaXI	ACNNNNNCTCC	4 cut(s)	1190, 1220, 1901, 1931
Bsc4I	CCNNNNNNNGG	8 cut(s)	136, 316, 653, 1249, 1424, 2204, 2332, 2371
Bse118I	RCCGGY	1 cut(s)	293
Bse1I	ACTGG	4 cut(s)	1217, 1748, 1772, 2572
Bse21I	CCTNAGG	4 cut(s)	167, 453, 2007, 2441
Bse3DI	GCAATG	3 cut(s)	960, 1827, 2266
Bse8I	GATNNNNATC	1 cut(s)	2670
BseBI	CCWGG	6 cut(s)	767, 1513, 2187, 2229, 2333, 2601
BseDI	CCNNGG	8 cut(s)	310, 765, 766, 1243, 1306, 1329, 2227, 2599
BseGI	GGATG	4 cut(s)	657, 1054, 1369, 2745
BseJI	GATNNNNATC	1 cut(s)	2670
BseLI	CCNNNNNNNGG	8 cut(s)	136, 316, 653, 1249, 1424, 2204, 2332, 2371
BseMI	GCAATG	3 cut(s)	960, 1827, 2266
BseNI	ACTGG	4 cut(s)	1217, 1748, 1772, 2572
BseRI	GAGGAG	5 cut(s)	173, 630, 983, 1211, 1587
BseSI	GKGCMC	3 cut(s)	1683, 1809, 2401
BseXI	GCAGC	5 cut(s)	163, 887, 1021, 1549, 1924
BseYI	CCCAGC	3 cut(s)	105, 200, 1141
BsgI	GTGCAG	2 cut(s)	1119, 2592
BshFI	GGCC	7 cut(s)	74, 417, 1146, 1681, 1768, 1884, 2439
BshNI	GGYRCC	3 cut(s)	1966, 2050, 2068
BsiHKAI	GWGCWC	3 cut(s)	249, 1809, 2466
BsiHKCI	CYCGRG	2 cut(s)	27, 350
BsiSI	CCGG	5 cut(s)	81, 294, 359, 1907, 2256
BslFI	GGGAC	5 cut(s)	341, 1965, 2088, 2175, 2582
BslI	CCNNNNNNNGG	8 cut(s)	136, 316, 653, 1249, 1424, 2204, 2332, 2371
BsmAI	GTCTC	7 cut(s)	300, 891, 1461, 2245, 2612, 2693, 2857
BsmFI	GGGAC	5 cut(s)	341, 1965, 2088, 2175, 2582
BsmI	GAATGC	3 cut(s)	345, 1324, 2770
BsnI	GGCC	7 cut(s)	74, 417, 1146, 1681, 1768, 1884, 2439
Bso31I	GGTCTC	3 cut(s)	300, 2612, 2857
BsoBI	CYCGRG	2 cut(s)	27, 350
Bsp119I	TTCGAA	1 cut(s)	260
Bsp120I	GGGCCC	1 cut(s)	1679
Bsp1286I	GDGCHC	6 cut(s)	142, 249, 1683, 1809, 2401, 2466
Bsp1407I	TGTACA	1 cut(s)	2757
Bsp19I	CCATGG	2 cut(s)	1243, 1306
BspANI	GGCC	7 cut(s)	74, 417, 1146, 1681, 1768, 1884, 2439
BspHI	TCATGA	1 cut(s)	2380
BspMAI	CTGCAG	1 cut(s)	2041
BspPI	GGATC	4 cut(s)	569, 1447, 2679, 2829
BspQI	GCTCTTC	2 cut(s)	561, 2454
BspT104I	TTCGAA	1 cut(s)	260
BspT107I	GGYRCC	3 cut(s)	1966, 2050, 2068
BspTNI	GGTCTC	3 cut(s)	300, 2612, 2857
BsrDI	GCAATG	3 cut(s)	960, 1827, 2266
BsrFI	RCCGGY	1 cut(s)	293
BsrGI	TGTACA	1 cut(s)	2757
BsrI	ACTGG	4 cut(s)	1217, 1748, 1772, 2572
BssAI	RCCGGY	1 cut(s)	293
BssECI	CCNNGG	8 cut(s)	310, 765, 766, 1243, 1306, 1329, 2227, 2599
BssNI	GRCGYC	1 cut(s)	1589
BssT1I	CCWWGG	3 cut(s)	1243, 1306, 1329
Bst2UI	CCWGG	6 cut(s)	767, 1513, 2187, 2229, 2333, 2601
Bst6I	CTCTTC	7 cut(s)	445, 561, 1197, 1564, 2454, 2630, 2727
BstACI	GRCGYC	1 cut(s)	1589
BstAPI	GCANNNNNTGC	2 cut(s)	373, 1543
BstAUI	TGTACA	1 cut(s)	2757
BstBI	TTCGAA	1 cut(s)	260
BstDSI	CCRYGG	3 cut(s)	310, 1243, 1306
BstENI	CCTNNNNNAGG	1 cut(s)	2369
BstF5I	GGATG	4 cut(s)	657, 1054, 1369, 2745
BstHHI	GCGC	2 cut(s)	341, 510
BstMAI	GTCTC	7 cut(s)	300, 891, 1461, 2245, 2612, 2693, 2857
BstMWI	GCNNNNNNNGC	9 cut(s)	71, 151, 338, 373, 806, 1135, 1543, 1912, 2660
BstNI	CCWGG	6 cut(s)	767, 1513, 2187, 2229, 2333, 2601
BstNSI	RCATGY	3 cut(s)	2489, 2506, 2825
BstPAI	GACNNNNGTC	1 cut(s)	1245
BstSCI	CCNGG	9 cut(s)	79, 357, 765, 1511, 2185, 2227, 2254, 2331, 2599
BstSFI	CTRYAG	2 cut(s)	2037, 2340
BstSLI	GKGCMC	3 cut(s)	1683, 1809, 2401
BstV1I	GCAGC	5 cut(s)	163, 887, 1021, 1549, 1924
BstV2I	GAAGAC	2 cut(s)	440, 903
BstX2I	RGATCY	2 cut(s)	812, 2834
BstXI	CCANNNNNNTGG	3 cut(s)	518, 1182, 2228
BstYI	RGATCY	2 cut(s)	812, 2834
Bsu36I	CCTNAGG	4 cut(s)	167, 453, 2007, 2441
BsuI	GTATCC	2 cut(s)	727, 2081
BsuRI	GGCC	7 cut(s)	74, 417, 1146, 1681, 1768, 1884, 2439
BtgI	CCRYGG	3 cut(s)	310, 1243, 1306
BtgZI	GCGATG	2 cut(s)	274, 307
BtsCI	GGATG	4 cut(s)	657, 1054, 1369, 2745
BtsIMutI	CAGTG	4 cut(s)	380, 1102, 1755, 2565
CaiI	CAGNNNCTG	1 cut(s)	2600
CciI	TCATGA	1 cut(s)	2380
CfoI	GCGC	2 cut(s)	341, 510
Cfr10I	RCCGGY	1 cut(s)	293
CseI	GACGC	4 cut(s)	671, 1088, 1597, 2366
CsiI	ACCWGGT	1 cut(s)	2185
Csp6I	GTAC	9 cut(s)	482, 1277, 1350, 1843, 2069, 2108, 2586, 2758, 2885
CviQI	GTAC	9 cut(s)	482, 1277, 1350, 1843, 2069, 2108, 2586, 2758, 2885
DraI	TTTAAA	1 cut(s)	1113
DrdI	GACNNNNNNGTC	1 cut(s)	401
DseDI	GACNNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	1 cut(s)	415
Eam1104I	CTCTTC	7 cut(s)	445, 561, 1197, 1564, 2454, 2630, 2727
EarI	CTCTTC	7 cut(s)	445, 561, 1197, 1564, 2454, 2630, 2727
EciI	GGCGGA	1 cut(s)	1000
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	3 cut(s)	1243, 1306, 1329
Eco147I	AGGCCT	1 cut(s)	1768
Eco24I	GRGCYC	3 cut(s)	142, 249, 1683
Eco31I	GGTCTC	3 cut(s)	300, 2612, 2857
Eco47I	GGWCC	7 cut(s)	127, 163, 355, 771, 2102, 2189, 2810
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	5 cut(s)	531, 1362, 1425, 1599, 2880
Eco81I	CCTNAGG	4 cut(s)	167, 453, 2007, 2441
Eco88I	CYCGRG	2 cut(s)	27, 350
EcoICRI	GAGCTC	1 cut(s)	247
EcoNI	CCTNNNNNAGG	1 cut(s)	2369
EcoO109I	RGGNCCY	5 cut(s)	163, 355, 2102, 2189, 2810
EcoRI	GAATTC	1 cut(s)	2677
EcoRII	CCWGG	6 cut(s)	765, 1511, 2185, 2227, 2331, 2599
EcoT14I	CCWWGG	3 cut(s)	1243, 1306, 1329
EcoT38I	GRGCYC	3 cut(s)	142, 249, 1683
ErhI	CCWWGG	3 cut(s)	1243, 1306, 1329
FalI	AAGNNNNNCTT	2 cut(s)	2196, 2228
FaqI	GGGAC	5 cut(s)	341, 1965, 2088, 2175, 2582
FauI	CCCGC	3 cut(s)	63, 147, 350
FauNDI	CATATG	2 cut(s)	1084, 2475
Fnu4HI	GCNGC	7 cut(s)	152, 197, 876, 1035, 1139, 1538, 1913
FokI	GGATG	4 cut(s)	644, 1041, 1356, 2752
FriOI	GRGCYC	3 cut(s)	142, 249, 1683
Fsp4HI	GCNGC	7 cut(s)	152, 197, 876, 1035, 1139, 1538, 1913
FspBI	CTAG	9 cut(s)	39, 801, 1157, 1287, 1359, 1655, 1707, 2244, 2418
GlaI	GCGC	2 cut(s)	340, 509
GluI	GCNGC	7 cut(s)	152, 197, 876, 1035, 1139, 1538, 1913
GsaI	CCCAGC	3 cut(s)	109, 204, 1145
GsuI	CTGGAG	1 cut(s)	1755
HaeIII	GGCC	7 cut(s)	74, 417, 1146, 1681, 1768, 1884, 2439
HapII	CCGG	5 cut(s)	81, 294, 359, 1907, 2256
HgaI	GACGC	4 cut(s)	671, 1088, 1597, 2366
HhaI	GCGC	2 cut(s)	341, 510
Hin1I	GRCGYC	1 cut(s)	1589
Hin6I	GCGC	2 cut(s)	339, 508
HinP1I	GCGC	2 cut(s)	339, 508
HincII	GTYRAC	3 cut(s)	1051, 1959, 2117
HindII	GTYRAC	3 cut(s)	1051, 1959, 2117
HindIII	AAGCTT	1 cut(s)	1649
HpaII	CCGG	5 cut(s)	81, 294, 359, 1907, 2256
HphI	GGTGA	5 cut(s)	274, 747, 1634, 1784, 2420
Hpy99I	CGWCG	3 cut(s)	185, 188, 823
HpyCH4IV	ACGT	1 cut(s)	1779
HpyF10VI	GCNNNNNNNGC	9 cut(s)	71, 151, 338, 373, 806, 1135, 1543, 1912, 2660
HpySE526I	ACGT	1 cut(s)	1779
Hsp92I	GRCGYC	1 cut(s)	1589
HspAI	GCGC	2 cut(s)	339, 508
KpnI	GGTACC	1 cut(s)	2072
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
LguI	GCTCTTC	2 cut(s)	561, 2454
LmnI	GCTCC	6 cut(s)	244, 950, 1331, 1333, 1909, 2777
Lsp1109I	GCAGC	5 cut(s)	163, 887, 1021, 1549, 1924
LweI	GCATC	4 cut(s)	330, 666, 1734, 2740
MabI	ACCWGGT	1 cut(s)	2185
MaeI	CTAG	9 cut(s)	39, 801, 1157, 1287, 1359, 1655, 1707, 2244, 2418
MaeII	ACGT	1 cut(s)	1779
MaeIII	GTNAC	5 cut(s)	1253, 1597, 1720, 2488, 2799
MflI	RGATCY	2 cut(s)	812, 2834
MhlI	GDGCHC	6 cut(s)	142, 249, 1683, 1809, 2401, 2466
MlyI	GAGTC	8 cut(s)	51, 109, 757, 980, 1724, 1949, 2355, 2849
MmeI	TCCRAC	3 cut(s)	137, 222, 669
MreI	CGCCGGCG	1 cut(s)	293
MroNI	GCCGGC	1 cut(s)	293
MroXI	GAANNNNTTC	1 cut(s)	1699
MseI	TTAA	9 cut(s)	255, 729, 1073, 1112, 1557, 1641, 1763, 2078, 2355
MspA1I	CMGCKG	2 cut(s)	65, 154
MspI	CCGG	5 cut(s)	81, 294, 359, 1907, 2256
MspR9I	CCNGG	9 cut(s)	81, 359, 767, 1513, 2187, 2229, 2256, 2333, 2601
Mva1269I	GAATGC	3 cut(s)	345, 1324, 2770
MvaI	CCWGG	6 cut(s)	767, 1513, 2187, 2229, 2333, 2601
MwoI	GCNNNNNNNGC	9 cut(s)	71, 151, 338, 373, 806, 1135, 1543, 1912, 2660
NaeI	GCCGGC	1 cut(s)	295
NciI	CCSGG	3 cut(s)	81, 359, 2256
NcoI	CCATGG	2 cut(s)	1243, 1306
NdeI	CATATG	2 cut(s)	1084, 2475
NgoMIV	GCCGGC	1 cut(s)	293
NmeAIII	GCCGAG	1 cut(s)	443
NmuCI	GTSAC	2 cut(s)	1597, 2799
NspI	RCATGY	3 cut(s)	2489, 2506, 2825
NspV	TTCGAA	1 cut(s)	260
PaeI	GCATGC	1 cut(s)	2825
PaeR7I	CTCGAG	1 cut(s)	350
PagI	TCATGA	1 cut(s)	2380
PasI	CCCWGGG	1 cut(s)	766
PceI	AGGCCT	1 cut(s)	1768
PciSI	GCTCTTC	2 cut(s)	561, 2454
PctI	GAATGC	3 cut(s)	345, 1324, 2770
PdiI	GCCGGC	1 cut(s)	295
PdmI	GAANNNNTTC	1 cut(s)	1699
PfeI	GAWTC	8 cut(s)	132, 635, 1409, 1549, 1837, 2336, 2384, 2497
PflFI	GACNNNGTC	1 cut(s)	1954
PflMI	CCANNNNNTGG	1 cut(s)	653
PfoI	TCCNGGA	1 cut(s)	2331
PkrI	GCNGC	7 cut(s)	153, 198, 877, 1036, 1140, 1539, 1914
PleI	GAGTC	8 cut(s)	50, 109, 756, 979, 1724, 1948, 2354, 2848
PpsI	GAGTC	8 cut(s)	50, 109, 756, 979, 1724, 1948, 2354, 2848
PpuMI	RGGWCCY	5 cut(s)	163, 355, 2102, 2189, 2810
PshAI	GACNNNNGTC	1 cut(s)	1245
Psp124BI	GAGCTC	1 cut(s)	249
Psp5II	RGGWCCY	5 cut(s)	163, 355, 2102, 2189, 2810
Psp6I	CCWGG	6 cut(s)	765, 1511, 2185, 2227, 2331, 2599
PspFI	CCCAGC	3 cut(s)	105, 200, 1141
PspGI	CCWGG	6 cut(s)	765, 1511, 2185, 2227, 2331, 2599
PspOMI	GGGCCC	1 cut(s)	1679
PspPPI	RGGWCCY	5 cut(s)	163, 355, 2102, 2189, 2810
PstI	CTGCAG	1 cut(s)	2041
PstNI	CAGNNNCTG	1 cut(s)	2600
PsuI	RGATCY	2 cut(s)	812, 2834
PsyI	GACNNNGTC	1 cut(s)	1954
RsaI	GTAC	9 cut(s)	483, 1278, 1351, 1844, 2070, 2109, 2587, 2759, 2886
RsaNI	GTAC	9 cut(s)	482, 1277, 1350, 1843, 2069, 2108, 2586, 2758, 2885
SacI	GAGCTC	1 cut(s)	249
SapI	GCTCTTC	2 cut(s)	561, 2454
SaqAI	TTAA	9 cut(s)	255, 729, 1073, 1112, 1557, 1641, 1763, 2078, 2355
SatI	GCNGC	7 cut(s)	152, 197, 876, 1035, 1139, 1538, 1913
ScaI	AGTACT	1 cut(s)	1351
SchI	GAGTC	8 cut(s)	51, 109, 757, 980, 1724, 1949, 2355, 2849
ScrFI	CCNGG	9 cut(s)	81, 359, 767, 1513, 2187, 2229, 2256, 2333, 2601
SduI	GDGCHC	6 cut(s)	142, 249, 1683, 1809, 2401, 2466
SexAI	ACCWGGT	1 cut(s)	2185
SfaNI	GCATC	4 cut(s)	330, 666, 1734, 2740
SfcI	CTRYAG	2 cut(s)	2037, 2340
Sfr274I	CTCGAG	1 cut(s)	350
SfuI	TTCGAA	1 cut(s)	260
SgrAI	CRCCGGYG	1 cut(s)	293
SinI	GGWCC	7 cut(s)	127, 163, 355, 771, 2102, 2189, 2810
SlaI	CTCGAG	1 cut(s)	350
SmlI	CTYRAG	5 cut(s)	146, 350, 1503, 2295, 2369
SmoI	CTYRAG	5 cut(s)	146, 350, 1503, 2295, 2369
SphI	GCATGC	1 cut(s)	2825
SseBI	AGGCCT	1 cut(s)	1768
SspI	AATATT	5 cut(s)	412, 677, 832, 1582, 2026
SspMI	CTAG	9 cut(s)	39, 801, 1157, 1287, 1359, 1655, 1707, 2244, 2418
SstI	GAGCTC	1 cut(s)	249
StuI	AGGCCT	1 cut(s)	1768
StyD4I	CCNGG	9 cut(s)	79, 357, 765, 1511, 2185, 2227, 2254, 2331, 2599
StyI	CCWWGG	3 cut(s)	1243, 1306, 1329
TaiI	ACGT	1 cut(s)	1782
TaqI	TCGA	9 cut(s)	260, 351, 564, 643, 974, 1459, 1735, 1949, 2349
TaqII	GACCGA	2 cut(s)	144, 1421
TatI	WGTACW	3 cut(s)	481, 1349, 2757
TauI	GCSGC	2 cut(s)	199, 1141
TfiI	GAWTC	8 cut(s)	132, 635, 1409, 1549, 1837, 2336, 2384, 2497
Tru1I	TTAA	9 cut(s)	255, 729, 1073, 1112, 1557, 1641, 1763, 2078, 2355
Tru9I	TTAA	9 cut(s)	255, 729, 1073, 1112, 1557, 1641, 1763, 2078, 2355
TscAI	CASTG	4 cut(s)	387, 1102, 1755, 2572
TseFI	GTSAC	2 cut(s)	1597, 2799
TseI	GCWGC	5 cut(s)	151, 875, 1034, 1537, 1912
Tsp45I	GTSAC	2 cut(s)	1597, 2799
TspGWI	ACGGA	5 cut(s)	327, 916, 2100, 2206, 2790
TspRI	CASTG	4 cut(s)	387, 1102, 1755, 2572
Tth111I	GACNNNGTC	1 cut(s)	1954
Van91I	CCANNNNNTGG	1 cut(s)	653
VneI	GTGCAC	1 cut(s)	1805
VpaK11BI	GGWCC	7 cut(s)	127, 163, 355, 771, 2102, 2189, 2810
XagI	CCTNNNNNAGG	1 cut(s)	2369
XapI	RAATTY	3 cut(s)	1231, 2351, 2677
XbaI	TCTAGA	3 cut(s)	1156, 1286, 1654
XceI	RCATGY	3 cut(s)	2489, 2506, 2825
XhoI	CTCGAG	1 cut(s)	350
XmnI	GAANNNNTTC	1 cut(s)	1699
XspI	CTAG	9 cut(s)	39, 801, 1157, 1287, 1359, 1655, 1707, 2244, 2418
ZrmI	AGTACT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.