Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009992

Physical Location & Seq

Genomic Coordinates Forward (+)

2328608 .. 2334853

Gene Structure 6246 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG036800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGAGTCATACAGATTTTCCTGTTGGGTCCAATCGTATACAGCCATCTTCAACTGTCAGACTTGCAAGATCTTCTTCACCTTCAAATATTGGCCTTGATGAATATGAAGTAGAAAATTCTCCTAAAAGGTTTGGTGACCGGGCTTCTCCATCTAATTCTGTGTATGATTATAGAGCAATCAGAGATGAGGAGCCAAATGAAAGGCGGAGAAAACATTATCTTGATGGTAGTCAGAACCGGTTAAATAATGGACTTGAACATCAAAGACCAAGAGCTTTGATTGATGCATATGGAAAAGACAGTGGAGATAGAAGTTTAAATGATAAGCCTTTGCATGTTGGGCGGCTTGGTGTAAATGGTCTAGATCACAAAGCAACTTCAATGTCATGGCAGAATACTGAGGAGGATGAGTTTGATTGGAAATCTGTCGGCCCACCTATAACTGAGCACACTAGGAGTAATGATTTCTTGCCTTCAAATATACCACCTTCTAGAAGCTACAGGGCCAGGCCTGGCCTCGGAACACTGAATGCAAGCTCCTTAGATTCTGATATTGGGAGTAGTTGGTCTACTCAGGCATACCTACCTTCCGAACAGTCCTCTGTAGTTGCTGAAGATCCAGTCCCCTCGCTTTCTTTTACTCGTGGATTTGCGGGTAGATTCCAGTCCGAGATAAATCATAATCAGGGTTCTCGCCACCCTCAAGAACCCTGGAATATGCCTTTCCATCCCTCTCAGCATTCACAGACTCTTCTTAATTCCAAAGAAATAGGTAGAAATTTCCATATGCCTGGTATGTCTCTAGGTGGTGAGAAAGTGTCTACTGATGCCGATGTGCGACTTCACGGGCCAACATCAAGAATGGGTTCTGGTGCTGACTTTGTTAATGCTGACTCTCGGTTAGTTATACCAATGTCAGTGGGTTTAAGGCCTCCAGTAAACGTGCACAATTCTCACCCGCCGCCTGTGCACCCAATTTTTCCATTGCAAAACCAGAGGAGTCAGTATGGTTTCATAAATTCTGTCGATACTGCTAAGAATCAAGGTCCATATAAGTCTATGTATATGCCTGAGCAGCAGTTGGACGGTTATGAAAACAAGGATTTGGGGTTGGCAAAGCTAAGTCAGTTGACTAGTCAGAATGCCAGACTCATACCTGTTAATCAGCGAAACCAGGCTCAGGTCAGTCCTTTCCAACCACAATTTCATCCACATCAGGAGCCACCTTATTCAGTGGTACCACGTGGATACAATTTGCAAGGGCAGGGTGGTACTGGTATTGCAAATCCTGTACCTCGTCTACAGTTGGGCTTACCAACTCACTATACCCCAAACGCTAATTTGCGTGGGGACTCCTTGCCACCTCTACCACCTGGCCCCCCTCCTCCCATGCAAGGTGTATTTCCTGGTCAAAAGGCTGGTCCGGTAGTCTCTAGCAACCAGCAAGGGAGTTCATATACTGGTTTGATTAGTTCTCTCATGGCTCAAGGTGTGATCTCATTGACAAATCCAAGTGGACTGCAGGATTCTGTAGGAGTTGAGTTTAATGCAGACCTTCTTAAGGTACGTCATGAATCTGCAATAACTGCTCTGTATTATGATCTCCCAAGACAATGCACAACCTGTGGTCTCCGGTTCAAGTGCCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTGACAAAGAACAGGATGTCTAAAAACCGTAAGCAGAAGCCCTCTCGTAAGTGGTTTGTAACTACAAGCATGTGGCTCAGTGGTGCAGAGGCTTTGGGAACTGATGCAGTTCCTGGCTTTTTACCTGCTGACACCATTGCGGAAAAGAAGAGTGATGAAGAATTGGCTGTTCCTGCTGATGAGGATCAAAATTCATGCGCGTTATGTGGAGAGCCTTTTGATGATTTTTATAGTGATGAGACAGAGGAGTGGATGTATAAAGGTGCTGTGTACTTGAATGCACCTCATGGTTCAACACCAGACATGGATAGGTCACAATTAGGTCCTATAGTGCATGCCAAATGCAGGCCGGAGTCCACTGATGTATCCCCTGGAGACTTTGGACAAGATGAAGGGGGAACTATTGAAGAGGGTAGTCAGAGAAAACGTTTGCGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

705

Amino Acids

77.75

Weight (kDa)

6.19

Isoelectric Point (pI)

61.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_PCFS4	PF23228	611 - 677	1.6e-29	PCFS4 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009992)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04885
fragaria_vesca	FvH4_3g02510 FvH4_3g02510 FvH4_3g02510 FvH4_3g02510
malus_domestica	MD05G1342300.v1.1 MD10G1315900.v1.1
prunus_persica	Prupe.4G024700_v2.0.a1
pyrus_communis	pycom05g31160 pycom10g26810
rosa_chinensis	RchiOBHm_Chr5g0003821
rosa_laevigata	RLG00000031178
rosa_multiflora	Rmu_sc0004212.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072170
rosa_rugosa	Rorug04G0406900 Rorug04G0407000
rosa_samantha	Rh5AG034400 Rh5BG032700 Rh5CG036800 Rh5DG033100
rosa_wichuraiana	Rw5G003150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1810
Acc65I	GGTACC	1 cut(s)	1237
AccB1I	GGYRCC	1 cut(s)	1237
AccI	GTMKAC	4 cut(s)	37, 569, 821, 1300
AccII	CGCG	1 cut(s)	1877
AciI	CCGC	7 cut(s)	205, 343, 653, 959, 962, 1817, 2110
AclI	AACGTT	1 cut(s)	2104
AclWI	GGATC	2 cut(s)	611, 1869
AcsI	RAATTY	4 cut(s)	115, 778, 1018, 1867
AcuI	CTGAAG	1 cut(s)	633
AcvI	CACGTG	1 cut(s)	1244
AfaI	GTAC	5 cut(s)	1239, 1273, 1293, 1566, 1949
AfiI	CCNNNNNNNGG	5 cut(s)	518, 1180, 1394, 1561, 2022
AflII	CTTAAG	1 cut(s)	1559
AgeI	ACCGGT	1 cut(s)	237
AgsI	TTSAA	9 cut(s)	51, 84, 257, 381, 477, 1639, 1954, 1971, 2084
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	9 cut(s)	506, 511, 710, 790, 1173, 1372, 1405, 1789, 2047
AjuI	GAANNNNNNNTTGG	2 cut(s)	1188, 1220
AluBI	AGCT	4 cut(s)	275, 498, 537, 1120
AluI	AGCT	4 cut(s)	275, 498, 537, 1120
Alw21I	GWGCWC	4 cut(s)	450, 948, 972, 1656
Alw26I	GTCTC	5 cut(s)	804, 1435, 1634, 1910, 2046
Alw44I	GTGCAC	2 cut(s)	944, 968
AlwI	GGATC	2 cut(s)	611, 1869
AlwNI	CAGNNNCTG	1 cut(s)	1790
AoxI	GGCC	9 cut(s)	91, 430, 504, 509, 514, 848, 929, 1375, 2024
ApaLI	GTGCAC	2 cut(s)	944, 968
ApeKI	GCWGC	1 cut(s)	1075
ApoI	RAATTY	4 cut(s)	115, 778, 1018, 1867
ArsI	GACNNNNNNTTYG	2 cut(s)	1405, 1437
AsiGI	ACCGGT	1 cut(s)	237
Asp700I	GAANNNNTTC	1 cut(s)	865
Asp718I	GGTACC	1 cut(s)	1237
AspLEI	GCGC	1 cut(s)	1877
AspS9I	GGNCC	8 cut(s)	27, 431, 504, 848, 1046, 1376, 1421, 2000
AsuC2I	CCSGG	1 cut(s)	140
AsuHPI	GGTGA	4 cut(s)	69, 146, 821, 947
AvaII	GGWCC	4 cut(s)	27, 1046, 1421, 2000
BaeGI	GKGCMC	2 cut(s)	948, 972
BaeI	ACNNNNGTAYC	2 cut(s)	2025, 2058
BanI	GGYRCC	1 cut(s)	1237
BauI	CACGAG	1 cut(s)	642
BbrPI	CACGTG	1 cut(s)	1244
Bbv12I	GWGCWC	4 cut(s)	450, 948, 972, 1656
BbvI	GCAGC	1 cut(s)	1087
BccI	CCATC	4 cut(s)	52, 157, 218, 735
BciT130I	CCWGG	9 cut(s)	508, 513, 712, 792, 1175, 1374, 1407, 1791, 2049
BciVI	GTATCC	2 cut(s)	1241, 2053
BcnI	CCSGG	1 cut(s)	140
BcoDI	GTCTC	5 cut(s)	804, 1435, 1634, 1910, 2046
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	6 cut(s)	362, 453, 492, 803, 1134, 1434
BfmI	CTRYAG	6 cut(s)	499, 603, 1301, 1520, 1530, 2004
BfrI	CTTAAG	1 cut(s)	1559
BfuAI	ACCTGC	1 cut(s)	1810
BfuI	GTATCC	2 cut(s)	1241, 2053
BglII	AGATCT	1 cut(s)	68
BisI	GCNGC	3 cut(s)	344, 962, 1076
BlsI	GCNGC	3 cut(s)	345, 963, 1077
Bme18I	GGWCC	4 cut(s)	27, 1046, 1421, 2000
BmgT120I	GGNCC	8 cut(s)	27, 431, 504, 848, 1046, 1376, 1421, 2000
BmiI	GGNNCC	5 cut(s)	28, 192, 1221, 1239, 1378
BmsI	GCATC	3 cut(s)	274, 817, 1771
BpmI	CTGGAG	2 cut(s)	918, 2070
Bpu10I	CCTNAGC	2 cut(s)	1071, 1179
BpuEI	CTTGAG	2 cut(s)	687, 1470
BpuMI	CCSGG	1 cut(s)	140
BsaAI	YACGTR	1 cut(s)	1244
BsaBI	GATNNNNATC	1 cut(s)	1860
BsaI	GGTCTC	1 cut(s)	1634
BsaJI	CCNNGG	3 cut(s)	517, 710, 2047
BsaWI	WCCGGW	3 cut(s)	237, 1423, 1632
BsaXI	ACNNNNNCTCC	4 cut(s)	395, 425, 1916, 1946
Bsc4I	CCNNNNNNNGG	5 cut(s)	518, 1180, 1394, 1561, 2022
Bse118I	RCCGGY	1 cut(s)	237
Bse1I	ACTGG	5 cut(s)	620, 664, 935, 1279, 1465
Bse3DI	GCAATG	2 cut(s)	983, 1812
Bse8I	GATNNNNATC	1 cut(s)	1860
BseBI	CCWGG	9 cut(s)	508, 513, 712, 792, 1175, 1374, 1407, 1791, 2049
BseDI	CCNNGG	3 cut(s)	517, 710, 2047
BseGI	GGATG	5 cut(s)	412, 727, 1207, 1698, 1935
BseJI	GATNNNNATC	1 cut(s)	1860
BseLI	CCNNNNNNNGG	5 cut(s)	518, 1180, 1394, 1561, 2022
BseMI	GCAATG	2 cut(s)	983, 1812
BseMII	CTCAG	7 cut(s)	390, 435, 587, 749, 1062, 1193, 1768
BseNI	ACTGG	5 cut(s)	620, 664, 935, 1279, 1465
BseRI	GAGGAG	6 cut(s)	203, 416, 1012, 1374, 1664, 1937
BseSI	GKGCMC	2 cut(s)	948, 972
BseXI	GCAGC	1 cut(s)	1087
BsgI	GTGCAG	1 cut(s)	1782
Bsh1236I	CGCG	1 cut(s)	1877
BshFI	GGCC	9 cut(s)	93, 432, 506, 511, 516, 850, 931, 1377, 2026
BshNI	GGYRCC	1 cut(s)	1237
BshTI	ACCGGT	1 cut(s)	237
BsiHKAI	GWGCWC	4 cut(s)	450, 948, 972, 1656
BsiSI	CCGG	5 cut(s)	139, 238, 1424, 1633, 2027
BslFI	GGGAC	2 cut(s)	608, 1364
BslI	CCNNNNNNNGG	5 cut(s)	518, 1180, 1394, 1561, 2022
BsmAI	GTCTC	5 cut(s)	804, 1435, 1634, 1910, 2046
BsmFI	GGGAC	2 cut(s)	608, 1364
BsmI	GAATGC	4 cut(s)	535, 739, 1147, 1960
BsnI	GGCC	9 cut(s)	93, 432, 506, 511, 516, 850, 931, 1377, 2026
Bso31I	GGTCTC	1 cut(s)	1634
Bsp1286I	GDGCHC	4 cut(s)	450, 948, 972, 1656
Bsp143I	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
BspACI	CCGC	7 cut(s)	205, 343, 653, 959, 962, 1817, 2110
BspANI	GGCC	9 cut(s)	93, 432, 506, 511, 516, 850, 931, 1377, 2026
BspCNI	CTCAG	7 cut(s)	391, 436, 586, 748, 1063, 1192, 1767
BspFNI	CGCG	1 cut(s)	1877
BspHI	TCATGA	1 cut(s)	1570
BspLI	GGNNCC	5 cut(s)	28, 192, 1221, 1239, 1378
BspMAI	CTGCAG	1 cut(s)	1524
BspMI	ACCTGC	1 cut(s)	1810
BspPI	GGATC	2 cut(s)	611, 1869
BspT107I	GGYRCC	1 cut(s)	1237
BspTI	CTTAAG	1 cut(s)	1559
BspTNI	GGTCTC	1 cut(s)	1634
BsrDI	GCAATG	2 cut(s)	983, 1812
BsrFI	RCCGGY	1 cut(s)	237
BsrI	ACTGG	5 cut(s)	620, 664, 935, 1279, 1465
BssAI	RCCGGY	1 cut(s)	237
BssECI	CCNNGG	3 cut(s)	517, 710, 2047
BssMI	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
BssNAI	GTATAC	1 cut(s)	38
BssSI	CACGAG	1 cut(s)	642
Bst1107I	GTATAC	1 cut(s)	38
Bst2BI	CACGAG	1 cut(s)	642
Bst2UI	CCWGG	9 cut(s)	508, 513, 712, 792, 1175, 1374, 1407, 1791, 2049
Bst4CI	ACNGT	7 cut(s)	55, 302, 597, 1088, 1305, 1658, 1706
Bst6I	CTCTTC	3 cut(s)	756, 1820, 2079
BstAFI	CTTAAG	1 cut(s)	1559
BstAPI	GCANNNNNTGC	1 cut(s)	1586
BstBAI	YACGTR	1 cut(s)	1244
BstC8I	GCNNGC	3 cut(s)	535, 2013, 2024
BstEII	GGTNACC	1 cut(s)	134
BstENI	CCTNNNNNAGG	1 cut(s)	1559
BstF5I	GGATG	5 cut(s)	412, 727, 1207, 1698, 1935
BstFNI	CGCG	1 cut(s)	1877
BstHHI	GCGC	1 cut(s)	1877
BstKTI	GATC	6 cut(s)	71, 367, 619, 1497, 1603, 1864
BstMAI	GTCTC	5 cut(s)	804, 1435, 1634, 1910, 2046
BstMBI	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
BstMWI	GCNNNNNNNGC	5 cut(s)	340, 967, 1075, 1586, 1850
BstNI	CCWGG	9 cut(s)	508, 513, 712, 792, 1175, 1374, 1407, 1791, 2049
BstNSI	RCATGY	4 cut(s)	338, 1679, 1750, 2015
BstPI	GGTNACC	1 cut(s)	134
BstSFI	CTRYAG	6 cut(s)	499, 603, 1301, 1520, 1530, 2004
BstSLI	GKGCMC	2 cut(s)	948, 972
BstUI	CGCG	1 cut(s)	1877
BstV1I	GCAGC	1 cut(s)	1087
BstX2I	RGATCY	2 cut(s)	68, 616
BstXI	CCANNNNNNTGG	1 cut(s)	791
BstYI	RGATCY	2 cut(s)	68, 616
BstZ17I	GTATAC	1 cut(s)	38
BsuI	GTATCC	2 cut(s)	1241, 2053
BsuRI	GGCC	9 cut(s)	93, 432, 506, 511, 516, 850, 931, 1377, 2026
BtsCI	GGATG	5 cut(s)	412, 727, 1207, 1698, 1935
BtsIMutI	CAGTG	6 cut(s)	307, 524, 924, 1239, 1762, 2034
BveI	ACCTGC	1 cut(s)	1810
Cac8I	GCNNGC	3 cut(s)	535, 2013, 2024
CaiI	CAGNNNCTG	1 cut(s)	1790
CciI	TCATGA	1 cut(s)	1570
CfoI	GCGC	1 cut(s)	1877
Cfr10I	RCCGGY	1 cut(s)	237
Cfr13I	GGNCC	8 cut(s)	27, 431, 504, 848, 1046, 1376, 1421, 2000
Csp6I	GTAC	5 cut(s)	1238, 1272, 1292, 1565, 1948
CspAI	ACCGGT	1 cut(s)	237
CspCI	CAANNNNNGTGG	2 cut(s)	900, 935
CviQI	GTAC	5 cut(s)	1238, 1272, 1292, 1565, 1948
DpnI	GATC	6 cut(s)	70, 366, 618, 1496, 1602, 1863
DpnII	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
DraI	TTTAAA	1 cut(s)	318
Eam1104I	CTCTTC	3 cut(s)	756, 1820, 2079
EarI	CTCTTC	3 cut(s)	756, 1820, 2079
EciI	GGCGGA	1 cut(s)	220
Eco147I	AGGCCT	2 cut(s)	511, 931
Eco31I	GGTCTC	1 cut(s)	1634
Eco47I	GGWCC	4 cut(s)	27, 1046, 1421, 2000
Eco57I	CTGAAG	1 cut(s)	633
Eco72I	CACGTG	1 cut(s)	1244
Eco91I	GGTNACC	1 cut(s)	134
EcoNI	CCTNNNNNAGG	1 cut(s)	1559
EcoO109I	RGGNCCY	1 cut(s)	2000
EcoO65I	GGTNACC	1 cut(s)	134
EcoRII	CCWGG	9 cut(s)	506, 511, 710, 790, 1173, 1372, 1405, 1789, 2047
EcoT22I	ATGCAT	1 cut(s)	289
FalI	AAGNNNNNCTT	2 cut(s)	58, 90
FaqI	GGGAC	2 cut(s)	608, 1364
FauI	CCCGC	2 cut(s)	646, 966
FauNDI	CATATG	3 cut(s)	289, 786, 1665
FblI	GTMKAC	4 cut(s)	37, 569, 821, 1300
Fnu4HI	GCNGC	3 cut(s)	344, 962, 1076
FokI	GGATG	5 cut(s)	419, 714, 1194, 1705, 1942
Fsp4HI	GCNGC	3 cut(s)	344, 962, 1076
FspBI	CTAG	6 cut(s)	362, 453, 492, 803, 1134, 1434
GlaI	GCGC	1 cut(s)	1876
GluI	GCNGC	3 cut(s)	344, 962, 1076
GsuI	CTGGAG	2 cut(s)	918, 2070
HaeIII	GGCC	9 cut(s)	93, 432, 506, 511, 516, 850, 931, 1377, 2026
HapII	CCGG	5 cut(s)	139, 238, 1424, 1633, 2027
HhaI	GCGC	1 cut(s)	1877
Hin6I	GCGC	1 cut(s)	1875
HinP1I	GCGC	1 cut(s)	1875
HincII	GTYRAC	1 cut(s)	1131
HindII	GTYRAC	1 cut(s)	1131
HpaII	CCGG	5 cut(s)	139, 238, 1424, 1633, 2027
HphI	GGTGA	4 cut(s)	69, 146, 821, 947
Hpy188I	TCNGA	9 cut(s)	59, 182, 234, 521, 550, 592, 670, 1140, 2097
Hpy188III	TCNNGA	7 cut(s)	221, 362, 492, 704, 858, 1217, 1571
HpyAV	CCTTC	6 cut(s)	90, 483, 498, 597, 1565, 2063
HpyCH4III	ACNGT	7 cut(s)	55, 302, 597, 1088, 1305, 1658, 1706
HpyCH4IV	ACGT	4 cut(s)	942, 1243, 1567, 2104
HpyF10VI	GCNNNNNNNGC	5 cut(s)	340, 967, 1075, 1586, 1850
HpySE526I	ACGT	4 cut(s)	942, 1243, 1567, 2104
HspAI	GCGC	1 cut(s)	1875
KpnI	GGTACC	1 cut(s)	1241
Kzo9I	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
LmnI	GCTCC	4 cut(s)	190, 542, 1219, 1651
Lsp1109I	GCAGC	1 cut(s)	1087
LweI	GCATC	3 cut(s)	274, 817, 1771
MaeI	CTAG	6 cut(s)	362, 453, 492, 803, 1134, 1434
MaeII	ACGT	4 cut(s)	942, 1243, 1567, 2104
MaeIII	GTNAC	4 cut(s)	134, 1678, 1735, 1989
MalI	GATC	6 cut(s)	70, 366, 618, 1496, 1602, 1863
MboI	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
MboII	GAAGA	8 cut(s)	39, 63, 66, 626, 743, 1837, 1847, 2096
MflI	RGATCY	2 cut(s)	68, 616
MhlI	GDGCHC	4 cut(s)	450, 948, 972, 1656
MlyI	GAGTC	7 cut(s)	13, 742, 887, 1009, 1143, 1346, 2039
MmeI	TCCRAC	2 cut(s)	1062, 1219
Mph1103I	ATGCAT	1 cut(s)	289
MroXI	GAANNNNTTC	1 cut(s)	865
MseI	TTAA	8 cut(s)	242, 317, 756, 885, 926, 1161, 1545, 1560
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	5 cut(s)	139, 238, 1424, 1633, 2027
Mva1269I	GAATGC	4 cut(s)	535, 739, 1147, 1960
MvaI	CCWGG	9 cut(s)	508, 513, 712, 792, 1175, 1374, 1407, 1791, 2049
MvnI	CGCG	1 cut(s)	1877
MwoI	GCNNNNNNNGC	5 cut(s)	340, 967, 1075, 1586, 1850
NciI	CCSGG	1 cut(s)	140
NdeI	CATATG	3 cut(s)	289, 786, 1665
NdeII	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
NlaIV	GGNNCC	5 cut(s)	28, 192, 1221, 1239, 1378
NmuCI	GTSAC	3 cut(s)	134, 1678, 1989
NsiI	ATGCAT	1 cut(s)	289
NspI	RCATGY	4 cut(s)	338, 1679, 1750, 2015
PaeI	GCATGC	1 cut(s)	2015
PagI	TCATGA	1 cut(s)	1570
PceI	AGGCCT	2 cut(s)	511, 931
PctI	GAATGC	4 cut(s)	535, 739, 1147, 1960
PdmI	GAANNNNTTC	1 cut(s)	865
PfeI	GAWTC	5 cut(s)	545, 660, 1039, 1526, 1574
PinAI	ACCGGT	1 cut(s)	237
PkrI	GCNGC	3 cut(s)	345, 963, 1077
PleI	GAGTC	7 cut(s)	12, 742, 887, 1008, 1143, 1346, 2038
PmaCI	CACGTG	1 cut(s)	1244
PmlI	CACGTG	1 cut(s)	1244
PpsI	GAGTC	7 cut(s)	12, 742, 887, 1008, 1143, 1346, 2038
Ppu21I	YACGTR	1 cut(s)	1244
PpuMI	RGGWCCY	1 cut(s)	2000
Psp1406I	AACGTT	1 cut(s)	2104
Psp5II	RGGWCCY	1 cut(s)	2000
Psp6I	CCWGG	9 cut(s)	506, 511, 710, 790, 1173, 1372, 1405, 1789, 2047
PspCI	CACGTG	1 cut(s)	1244
PspEI	GGTNACC	1 cut(s)	134
PspGI	CCWGG	9 cut(s)	506, 511, 710, 790, 1173, 1372, 1405, 1789, 2047
PspN4I	GGNNCC	5 cut(s)	28, 192, 1221, 1239, 1378
PspPI	GGNCC	8 cut(s)	27, 431, 504, 848, 1046, 1376, 1421, 2000
PspPPI	RGGWCCY	1 cut(s)	2000
PstI	CTGCAG	1 cut(s)	1524
PstNI	CAGNNNCTG	1 cut(s)	1790
PsuI	RGATCY	2 cut(s)	68, 616
RsaI	GTAC	5 cut(s)	1239, 1273, 1293, 1566, 1949
RsaNI	GTAC	5 cut(s)	1238, 1272, 1292, 1565, 1948
SaqAI	TTAA	8 cut(s)	242, 317, 756, 885, 926, 1161, 1545, 1560
SatI	GCNGC	3 cut(s)	344, 962, 1076
Sau3AI	GATC	6 cut(s)	68, 364, 616, 1494, 1600, 1861
Sau96I	GGNCC	8 cut(s)	27, 431, 504, 848, 1046, 1376, 1421, 2000
SchI	GAGTC	7 cut(s)	13, 742, 887, 1009, 1143, 1346, 2039
SduI	GDGCHC	4 cut(s)	450, 948, 972, 1656
SfaNI	GCATC	3 cut(s)	274, 817, 1771
SfcI	CTRYAG	6 cut(s)	499, 603, 1301, 1520, 1530, 2004
SinI	GGWCC	4 cut(s)	27, 1046, 1421, 2000
SmlI	CTYRAG	3 cut(s)	702, 1485, 1559
SmoI	CTYRAG	3 cut(s)	702, 1485, 1559
SpeI	ACTAGT	1 cut(s)	1133
SphI	GCATGC	1 cut(s)	2015
SseBI	AGGCCT	2 cut(s)	511, 931
SsiI	CCGC	7 cut(s)	205, 343, 653, 959, 962, 1817, 2110
SspI	AATATT	1 cut(s)	88
SspMI	CTAG	6 cut(s)	362, 453, 492, 803, 1134, 1434
StuI	AGGCCT	2 cut(s)	511, 931
TaaI	ACNGT	7 cut(s)	55, 302, 597, 1088, 1305, 1658, 1706
TaiI	ACGT	4 cut(s)	945, 1246, 1570, 2107
TaqI	TCGA	1 cut(s)	1026
TatI	WGTACW	1 cut(s)	1947
TauI	GCSGC	2 cut(s)	346, 964
TfiI	GAWTC	5 cut(s)	545, 660, 1039, 1526, 1574
Tru1I	TTAA	8 cut(s)	242, 317, 756, 885, 926, 1161, 1545, 1560
Tru9I	TTAA	8 cut(s)	242, 317, 756, 885, 926, 1161, 1545, 1560
TscAI	CASTG	6 cut(s)	307, 531, 924, 1239, 1762, 2041
TseFI	GTSAC	3 cut(s)	134, 1678, 1989
TseI	GCWGC	1 cut(s)	1075
Tsp45I	GTSAC	3 cut(s)	134, 1678, 1989
TspRI	CASTG	6 cut(s)	307, 531, 924, 1239, 1762, 2041
Vha464I	CTTAAG	1 cut(s)	1559
VneI	GTGCAC	2 cut(s)	944, 968
VpaK11BI	GGWCC	4 cut(s)	27, 1046, 1421, 2000
XagI	CCTNNNNNAGG	1 cut(s)	1559
XapI	RAATTY	4 cut(s)	115, 778, 1018, 1867
XbaI	TCTAGA	2 cut(s)	361, 491
XceI	RCATGY	4 cut(s)	338, 1679, 1750, 2015
XmiI	GTMKAC	4 cut(s)	37, 569, 821, 1300
XmnI	GAANNNNTTC	1 cut(s)	865
XspI	CTAG	6 cut(s)	362, 453, 492, 803, 1134, 1434
Zsp2I	ATGCAT	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.