Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003038

Physical Location & Seq

Genomic Coordinates Forward (+)

699358 .. 702927

Gene Structure 3570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGAGCTTTGGAACCTACTGGTTGGGGGATAATCCGGAAAGTGAGGCTTCTGCAATGGATGATGGTGTTCTGTCACCAGCTACCATGTTGGGAGCTCAACCTGATTCCGCTACGGATTTAGATTTCATGGACGAACTCTTCTTGGAGGGATGCTGGTTGGAAACCACATATGGACCTGAGTTTCCTAATCAGGGCCTTCCCAGTACCGCTGCCCCCTTGAACTCCTCGTTTTTTTGGCATACGTTGGAGACCAATGGCAATATGGCCATGAGCACGTCTCACAGCAGTAATCAAGAGGAGATGCAAAGACCATTCCTTAAACAACTCGTAGAAGGTCCTGTGAATCCTCAGTCTCCTAGGGAGAATCTGATAAAAGATGCTGTGGCGTACTCTGGTCAACCAGTGGATCCTACAATTGAAGGTCGTGAATTTAGCAGAAGGTGGTGGATTGGTCCCACTGGAAATGAAGGTTTTGCATCATCTGTGACGGAGAGATTAATGAGGGCTCTCGTGAACATTGGAGAGGTCATGAGAAACGAAGATGTTCTTGTACAAGTATGGGTGCCAGTGAATAGAGGGGGTAGACATGTTTTAACAATGAATGAACTTTTCTATCTTGATTCTAGCTGTTCCAGGCTTGCTAAATATCGAGACATCTCTGCTAAATACCAGTTCGCAACTGGGGAGGATTCAACAGAAATGGTTATGGGGTTGCCTGGCCGGGTTTTCTCAGGTAAGATTCCTGAGTGGACTCCTGATGTTCGATACTTTAGACATGATGAATATCCACGGGTTAGCCATGCTCAACAGTATAATGGGTGTGACAATCCCTTTCACGCTGCGTTACCCGAGATCCAAGAGGTCTTGAGATCTGCATGTGAGACGCACAAGTTGCCCTTGGCACAAACCTGGATGTCATGCGTCCAACAAGGTAAAGATGGGTGCCGGCATTCTGATGACAACTACGTCCACTGTGTTTCAACTGTGGAGCATGCTTGTCATGTGGCTGATCCTAGTATCCAGAGTTTTCATGAAGCGTGCTCTGAGCATCACTTGCTAAGAGGCCAAGGCATCGTTGGGAAAGCTTTTATGACCAATCAGCCATGCTTCTCAATTGACATAACTTCCTTTGTCAAGACAGAGTATCCTCTATCTCACCATGCCAGGATGTTTGATTTGCATGCAGCTGTTGCAATACGTCTGCGGAGCATTGACACTGGTTCAACTGATTTTGTCCTGGAGTTCTTCTTGCCAGTGGAGTGCAGGGATCCTGAAGAACAGGAAAAGATGCTTACATCACTGTCCTTGGTTATGCAACAGACATGCCGGAGCTTACGGGTTGTCACAGACAAGGAAGTTGAGGAGGAAACTAATTTTCATGTCAGTGAGGTGATAGCTCGGTCAGAGCCCGGACCAAGTAATATTGCTTGTTTCACAGAGGTCCAACAGAATGGTAAGGATGTTTCAATGTTCCCAAACCAAAAACCACGCAAGGTGCTGAGTGTGAAATTGTCGAAGTTAAGGCAGCATCAAGAAGATTCAAACCTAAAAGGTGGTGTTGAGTGTGGACAAGAGTTTTCTGCTCTAGGTGAGGGTAGCTTTTCAAGTGTTGGTGTGAGCAAGACAAGAGAGAAAAGACGTACCAAGGCAGAAAAAGATATCAACTTGCAAGTTCTTCGCAAATATTTTTCCGGTAGTCTAAAAGATGCTGCAAAGAGTATTGGAGTTGAAGGCGCATCTGGTGCTTTCCAGATCAACTCTTTCTATACGAACTTCCCAGAGCTAACATCTCCAAATTTATCGGGGACCAGCCCATTTTCAAGTTCAAAGCTGAGTGATCAACCAAATCAGACAAACTTGTCACCCAAAGGTGGTGTTTTGAGCCCCCAAGCTACCGCATCAAAATCTCCTCCATCTTCATGCTGTCAGAGTTCCAGTTCAAGCCAATGCTGTTCCAGCAGGACACAGCAACTTCCCTTCTCATGTAACATTGCTGGTAACGATGATCCAGTTGTTGGAGATAACTCAAGAGATGATGTGCTAAAGAGGGTCAGAAGTGAGGCAGTATTGCATGCTTTTGGCCAAGATCGAGCAGAGCTACTGCCAAGATCCCAAAGCCAGAAACTTCTCTGCGAGCAACAAAATCTGCAGTCCATTCCACATTCACTGAAAAATAATGGCCGGGTAGCTCAAGAAGGCAAGGTCCAAAGAGTAAAAGTTGCATATGGGGATGAGAAAACCCGCTTCCGCATGCAGAGTAATTGGAGACATGAAGATTTGGTGCAAGAAATCGCAAAGCGATTTAGCATACAAGACATGAGTACGTATGATATAAAATACTTGGATGATGACTCGGAGTGGGTCTTGTTAACATGTGATGATGATTTAGAGGAGTGTGTTGATGTGTGCCGATCTTCAGAGAGCCGCACAATTAAGCTTTCTCTCCAGATATCTCGTCATCACTTGAAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

825

Amino Acids

92.0

Weight (kDa)

5.52

Isoelectric Point (pI)

56.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	274 - 446	9.2e-84	NLP protein GAF domain
PB1	PF00564	737 - 816	3.2e-20	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20640 AT1G20640 AT1G20640 AT1G76350 AT1G76350 AT1G76350 AT1G76350
fragaria_vesca	FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270
malus_domestica	MD06G1009200.v1.1 MD16G1285500.v1.1
prunus_persica	Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1
pyrus_communis	pycom06g00770 pycom16g25880
rosa_chinensis	RchiOBHm_Chr7g0215411
rosa_laevigata	RLG00000002660 RLG00000002663
rosa_multiflora	Rmu_co8448299.1_g000001 Rmu_sc0000355.1_g000001 Rmu_sc0005928.1_g000011
rosa_roxburghii	Rroxscaffold_3G00244210
rosa_rugosa	Rorug07G0153300 Rorug07G0153400
rosa_samantha	Rh7AG289800 Rh7BG281700 Rh7CG309400 Rh7DG293400
rosa_wichuraiana	Rw7G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	965, 1858
AccB1I	GGYRCC	2 cut(s)	562, 942
AccB7I	CCANNNNNTGG	1 cut(s)	2015
AccI	GTMKAC	1 cut(s)	583
AccIII	TCCGGA	1 cut(s)	34
AciI	CCGC	7 cut(s)	108, 207, 1204, 1896, 2242, 2248, 2425
AclWI	GGATC	8 cut(s)	401, 414, 847, 1004, 1262, 1275, 2000, 2103
AcoI	YGGCCR	4 cut(s)	264, 718, 2080, 2179
AcsI	RAATTY	2 cut(s)	428, 1795
AcuI	CTGAAG	2 cut(s)	1293, 2400
AfaI	GTAC	5 cut(s)	205, 389, 552, 1642, 2323
AfiI	CCNNNNNNNGG	3 cut(s)	191, 1871, 2015
AflIII	ACRYGT	2 cut(s)	586, 2372
AjiI	CACGTC	1 cut(s)	276
AjnI	CCWGG	5 cut(s)	632, 715, 908, 1163, 1236
Alw21I	GWGCWC	3 cut(s)	97, 275, 1043
Alw26I	GTCTC	6 cut(s)	242, 282, 357, 645, 875, 2260
AlwI	GGATC	8 cut(s)	401, 414, 847, 1004, 1262, 1275, 2000, 2103
Ama87I	CYCGRG	1 cut(s)	848
Aor13HI	TCCGGA	1 cut(s)	34
AoxI	GGCC	6 cut(s)	193, 264, 718, 1063, 2080, 2179
ApeKI	GCWGC	5 cut(s)	209, 839, 1184, 1525, 1709
ApoI	RAATTY	2 cut(s)	428, 1795
AseI	ATTAAT	1 cut(s)	497
Asp700I	GAANNNNTTC	1 cut(s)	543
AspA2I	CCTAGG	1 cut(s)	356
AspLEI	GCGC	1 cut(s)	1736
AspS9I	GGNCC	8 cut(s)	173, 193, 335, 452, 1412, 1441, 1806, 2203
AsuC2I	CCSGG	3 cut(s)	722, 1410, 2183
AsuHPI	GGTGA	5 cut(s)	66, 1148, 1402, 1601, 1854
AvaI	CYCGRG	1 cut(s)	848
AvaII	GGWCC	7 cut(s)	173, 335, 452, 1412, 1441, 1806, 2203
AvrII	CCTAGG	1 cut(s)	356
BalI	TGGCCA	2 cut(s)	266, 2082
BamHI	GGATCC	2 cut(s)	406, 1267
BanI	GGYRCC	2 cut(s)	562, 942
BanII	GRGCYC	4 cut(s)	97, 508, 1410, 1886
BauI	CACGAG	1 cut(s)	509
Bbv12I	GWGCWC	3 cut(s)	97, 275, 1043
BbvI	GCAGC	5 cut(s)	196, 826, 1196, 1537, 1696
BccI	CCATC	3 cut(s)	56, 932, 1921
BcgI	CGANNNNNNTGC	2 cut(s)	1658, 1692
BciT130I	CCWGG	5 cut(s)	634, 717, 910, 1165, 1238
BciVI	GTATCC	2 cut(s)	1028, 1155
BclI	TGATCA	1 cut(s)	1837
BcnI	CCSGG	3 cut(s)	722, 1410, 2183
BcoDI	GTCTC	6 cut(s)	242, 282, 357, 645, 875, 2260
BfaI	CTAG	4 cut(s)	357, 624, 1014, 1586
BfmI	CTRYAG	1 cut(s)	2147
BfuI	GTATCC	2 cut(s)	1028, 1155
BglII	AGATCT	1 cut(s)	869
BisI	GCNGC	6 cut(s)	210, 840, 1185, 1526, 1710, 2425
BlnI	CCTAGG	1 cut(s)	356
BlsI	GCNGC	6 cut(s)	211, 841, 1186, 1527, 1711, 2426
Bme1390I	CCNGG	8 cut(s)	634, 717, 722, 910, 1165, 1238, 1410, 2183
Bme18I	GGWCC	7 cut(s)	173, 335, 452, 1412, 1441, 1806, 2203
BmeT110I	CYCGRG	1 cut(s)	848
BmgBI	CACGTC	1 cut(s)	276
BmgT120I	GGNCC	8 cut(s)	173, 193, 335, 452, 1412, 1441, 1806, 2203
BmiI	GGNNCC	7 cut(s)	13, 408, 454, 564, 944, 1269, 1807
BmrFI	CCNGG	8 cut(s)	634, 717, 722, 910, 1165, 1238, 1410, 2183
BmrI	ACTGGG	2 cut(s)	195, 690
BmuI	ACTGGG	2 cut(s)	195, 690
BplI	GAGNNNNNCTC	2 cut(s)	262, 294
BpmI	CTGGAG	2 cut(s)	1259, 2429
BpuEI	CTTGAG	3 cut(s)	886, 2011, 2175
BpuMI	CCSGG	3 cut(s)	722, 1410, 2183
BsaAI	YACGTR	1 cut(s)	2325
BsaBI	GATNNNNATC	1 cut(s)	783
BsaI	GGTCTC	1 cut(s)	242
BsaJI	CCNNGG	6 cut(s)	356, 788, 897, 1066, 1305, 1644
BsaWI	WCCGGW	2 cut(s)	34, 1691
Bsc4I	CCNNNNNNNGG	3 cut(s)	191, 1871, 2015
Bse118I	RCCGGY	1 cut(s)	945
Bse3DI	GCAATG	2 cut(s)	60, 1989
Bse8I	GATNNNNATC	1 cut(s)	783
BseAI	TCCGGA	1 cut(s)	34
BseBI	CCWGG	5 cut(s)	634, 717, 910, 1165, 1238
BseDI	CCNNGG	6 cut(s)	356, 788, 897, 1066, 1305, 1644
BseGI	GGATG	7 cut(s)	64, 155, 918, 1173, 1465, 2236, 2350
BseJI	GATNNNNATC	1 cut(s)	783
BseLI	CCNNNNNNNGG	3 cut(s)	191, 1871, 2015
BseMI	GCAATG	2 cut(s)	60, 1989
BseMII	CTCAG	7 cut(s)	168, 362, 735, 744, 1035, 1490, 1823
BseRI	GAGGAG	5 cut(s)	214, 311, 1376, 1899, 2405
BseXI	GCAGC	5 cut(s)	196, 826, 1196, 1537, 1696
BsgI	GTGCAG	1 cut(s)	1282
BshFI	GGCC	6 cut(s)	195, 266, 720, 1065, 2082, 2181
BshNI	GGYRCC	2 cut(s)	562, 942
BsiHKAI	GWGCWC	3 cut(s)	97, 275, 1043
BsiHKCI	CYCGRG	1 cut(s)	848
BsiSI	CCGG	7 cut(s)	35, 721, 946, 1327, 1410, 1692, 2182
BslFI	GGGAC	2 cut(s)	438, 1819
BslI	CCNNNNNNNGG	3 cut(s)	191, 1871, 2015
BsmAI	GTCTC	6 cut(s)	242, 282, 357, 645, 875, 2260
BsmBI	CGTCTC	2 cut(s)	282, 875
BsmFI	GGGAC	2 cut(s)	438, 1819
BsmI	GAATGC	1 cut(s)	949
BsnI	GGCC	6 cut(s)	195, 266, 720, 1065, 2082, 2181
Bso31I	GGTCTC	1 cut(s)	242
BsoBI	CYCGRG	1 cut(s)	848
Bsp1286I	GDGCHC	6 cut(s)	97, 275, 508, 1043, 1410, 1886
Bsp13I	TCCGGA	1 cut(s)	34
Bsp1407I	TGTACA	1 cut(s)	550
BspACI	CCGC	7 cut(s)	108, 207, 1204, 1896, 2242, 2248, 2425
BspANI	GGCC	6 cut(s)	195, 266, 720, 1065, 2082, 2181
BspCNI	CTCAG	7 cut(s)	169, 361, 736, 743, 1036, 1491, 1824
BspEI	TCCGGA	1 cut(s)	34
BspHI	TCATGA	2 cut(s)	528, 1030
BspLI	GGNNCC	7 cut(s)	13, 408, 454, 564, 944, 1269, 1807
BspMAI	CTGCAG	1 cut(s)	2151
BspPI	GGATC	8 cut(s)	401, 414, 847, 1004, 1262, 1275, 2000, 2103
BspT107I	GGYRCC	2 cut(s)	562, 942
BspTNI	GGTCTC	1 cut(s)	242
BsrDI	GCAATG	2 cut(s)	60, 1989
BsrFI	RCCGGY	1 cut(s)	945
BsrGI	TGTACA	1 cut(s)	550
BssAI	RCCGGY	1 cut(s)	945
BssECI	CCNNGG	6 cut(s)	356, 788, 897, 1066, 1305, 1644
BssSI	CACGAG	1 cut(s)	509
BssT1I	CCWWGG	5 cut(s)	356, 897, 1066, 1305, 1644
Bst2BI	CACGAG	1 cut(s)	509
Bst2UI	CCWGG	5 cut(s)	634, 717, 910, 1165, 1238
Bst4CI	ACNGT	4 cut(s)	810, 974, 985, 1302
Bst6I	CTCTTC	1 cut(s)	143
BstAPI	GCANNNNNTGC	4 cut(s)	892, 1054, 1190, 1742
BstAUI	TGTACA	1 cut(s)	550
BstBAI	YACGTR	1 cut(s)	2325
BstC8I	GCNNGC	8 cut(s)	639, 947, 993, 1039, 1182, 2073, 2135, 2252
BstDEI	CTNAG	8 cut(s)	177, 348, 730, 744, 1044, 1058, 1499, 1832
BstDSI	CCRYGG	1 cut(s)	788
BstF5I	GGATG	7 cut(s)	64, 155, 918, 1173, 1465, 2236, 2350
BstHHI	GCGC	1 cut(s)	1736
BstMAI	GTCTC	6 cut(s)	242, 282, 357, 645, 875, 2260
BstMWI	GCNNNNNNNGC	5 cut(s)	892, 1054, 1190, 1742, 1956
BstNI	CCWGG	5 cut(s)	634, 717, 910, 1165, 1238
BstNSI	RCATGY	8 cut(s)	590, 879, 995, 1184, 1326, 2075, 2254, 2376
BstSCI	CCNGG	8 cut(s)	632, 715, 720, 908, 1163, 1236, 1408, 2181
BstSFI	CTRYAG	1 cut(s)	2147
BstSNI	TACGTA	1 cut(s)	2325
BstV1I	GCAGC	5 cut(s)	196, 826, 1196, 1537, 1696
BstX2I	RGATCY	5 cut(s)	406, 852, 869, 1267, 2108
BstXI	CCANNNNNNTGG	1 cut(s)	1451
BstYI	RGATCY	5 cut(s)	406, 852, 869, 1267, 2108
BsuI	GTATCC	2 cut(s)	1028, 1155
BsuRI	GGCC	6 cut(s)	195, 266, 720, 1065, 2082, 2181
BtgI	CCRYGG	1 cut(s)	788
BtrI	CACGTC	1 cut(s)	276
BtsCI	GGATG	7 cut(s)	64, 155, 918, 1173, 1465, 2236, 2350
BtsIMutI	CAGTG	9 cut(s)	408, 456, 573, 970, 1215, 1260, 1298, 1390, 2165
Cac8I	GCNNGC	8 cut(s)	639, 947, 993, 1039, 1182, 2073, 2135, 2252
CciI	TCATGA	2 cut(s)	528, 1030
CfoI	GCGC	1 cut(s)	1736
Cfr10I	RCCGGY	1 cut(s)	945
Cfr13I	GGNCC	8 cut(s)	173, 193, 335, 452, 1412, 1441, 1806, 2203
CseI	GACGC	2 cut(s)	892, 910
Csp6I	GTAC	5 cut(s)	204, 388, 551, 1641, 2322
CviQI	GTAC	5 cut(s)	204, 388, 551, 1641, 2322
DdeI	CTNAG	8 cut(s)	177, 348, 730, 744, 1044, 1058, 1499, 1832
DrdI	GACNNNNNNGTC	2 cut(s)	965, 1858
DseDI	GACNNNNNNGTC	2 cut(s)	965, 1858
EaeI	YGGCCR	4 cut(s)	264, 718, 2080, 2179
Eam1104I	CTCTTC	1 cut(s)	143
EarI	CTCTTC	1 cut(s)	143
Ecl136II	GAGCTC	1 cut(s)	95
Eco105I	TACGTA	1 cut(s)	2325
Eco130I	CCWWGG	5 cut(s)	356, 897, 1066, 1305, 1644
Eco24I	GRGCYC	4 cut(s)	97, 508, 1410, 1886
Eco31I	GGTCTC	1 cut(s)	242
Eco32I	GATATC	2 cut(s)	1660, 2451
Eco47I	GGWCC	7 cut(s)	173, 335, 452, 1412, 1441, 1806, 2203
Eco53kI	GAGCTC	1 cut(s)	95
Eco57I	CTGAAG	2 cut(s)	1293, 2400
Eco88I	CYCGRG	1 cut(s)	848
EcoICRI	GAGCTC	1 cut(s)	95
EcoO109I	RGGNCCY	2 cut(s)	193, 335
EcoRII	CCWGG	5 cut(s)	632, 715, 908, 1163, 1236
EcoRV	GATATC	2 cut(s)	1660, 2451
EcoT14I	CCWWGG	5 cut(s)	356, 897, 1066, 1305, 1644
EcoT38I	GRGCYC	4 cut(s)	97, 508, 1410, 1886
ErhI	CCWWGG	5 cut(s)	356, 897, 1066, 1305, 1644
Esp3I	CGTCTC	2 cut(s)	282, 875
FalI	AAGNNNNNCTT	6 cut(s)	31, 63, 531, 563, 881, 913
FaqI	GGGAC	2 cut(s)	438, 1819
FauI	CCCGC	1 cut(s)	2249
FauNDI	CATATG	2 cut(s)	169, 2224
FbaI	TGATCA	1 cut(s)	1837
FblI	GTMKAC	1 cut(s)	583
Fnu4HI	GCNGC	6 cut(s)	210, 840, 1185, 1526, 1710, 2425
FokI	GGATG	7 cut(s)	71, 162, 925, 1180, 1472, 2243, 2357
FriOI	GRGCYC	4 cut(s)	97, 508, 1410, 1886
Fsp4HI	GCNGC	6 cut(s)	210, 840, 1185, 1526, 1710, 2425
FspBI	CTAG	4 cut(s)	357, 624, 1014, 1586
GlaI	GCGC	1 cut(s)	1735
GluI	GCNGC	6 cut(s)	210, 840, 1185, 1526, 1710, 2425
GsuI	CTGGAG	2 cut(s)	1259, 2429
HaeIII	GGCC	6 cut(s)	195, 266, 720, 1065, 2082, 2181
HapII	CCGG	7 cut(s)	35, 721, 946, 1327, 1410, 1692, 2182
HgaI	GACGC	2 cut(s)	892, 910
HhaI	GCGC	1 cut(s)	1736
Hin6I	GCGC	1 cut(s)	1734
HinP1I	GCGC	1 cut(s)	1734
HincII	GTYRAC	2 cut(s)	398, 2370
HindII	GTYRAC	2 cut(s)	398, 2370
HindIII	AAGCTT	2 cut(s)	1083, 2435
HinfI	GANTC	9 cut(s)	104, 343, 364, 620, 689, 739, 751, 1538, 2351
HpaI	GTTAAC	1 cut(s)	2370
HpaII	CCGG	7 cut(s)	35, 721, 946, 1327, 1410, 1692, 2182
HphI	GGTGA	5 cut(s)	66, 1148, 1402, 1601, 1854
Hpy166II	GTNNAC	7 cut(s)	398, 514, 584, 750, 970, 1568, 2370
Hpy188I	TCNGA	9 cut(s)	369, 955, 1045, 1405, 1851, 1929, 2054, 2356, 2419
Hpy8I	GTNNAC	7 cut(s)	398, 514, 584, 750, 970, 1568, 2370
HpyAV	CCTTC	8 cut(s)	206, 326, 413, 432, 461, 1724, 1987, 2189
HpyCH4III	ACNGT	4 cut(s)	810, 974, 985, 1302
HpyCH4IV	ACGT	6 cut(s)	242, 275, 966, 1198, 1639, 2324
HpyF10VI	GCNNNNNNNGC	5 cut(s)	892, 1054, 1190, 1742, 1956
HpyF3I	CTNAG	8 cut(s)	177, 348, 730, 744, 1044, 1058, 1499, 1832
HpySE526I	ACGT	6 cut(s)	242, 275, 966, 1198, 1639, 2324
HspAI	GCGC	1 cut(s)	1734
Kpn2I	TCCGGA	1 cut(s)	34
KroI	GCCGGC	1 cut(s)	945
KroNI	GCCGGC	1 cut(s)	947
Ksp22I	TGATCA	1 cut(s)	1837
KspAI	GTTAAC	1 cut(s)	2370
LmnI	GCTCC	4 cut(s)	92, 988, 1206, 1329
Lsp1109I	GCAGC	5 cut(s)	196, 826, 1196, 1537, 1696
MaeI	CTAG	4 cut(s)	357, 624, 1014, 1586
MaeII	ACGT	6 cut(s)	242, 275, 966, 1198, 1639, 2324
MaeIII	GTNAC	8 cut(s)	72, 484, 821, 843, 1342, 1860, 1985, 1997
MboII	GAAGA	9 cut(s)	130, 551, 1237, 1286, 1547, 1667, 1908, 2285, 2406
MfeI	CAATTG	2 cut(s)	414, 1113
MflI	RGATCY	5 cut(s)	406, 852, 869, 1267, 2108
MhlI	GDGCHC	6 cut(s)	97, 275, 508, 1043, 1410, 1886
MlsI	TGGCCA	2 cut(s)	266, 2082
MluCI	AATT	8 cut(s)	414, 428, 1113, 1372, 1508, 1795, 2260, 2430
MluNI	TGGCCA	2 cut(s)	266, 2082
MlyI	GAGTC	2 cut(s)	745, 2345
MmeI	TCCRAC	5 cut(s)	138, 225, 949, 1468, 1996
Mox20I	TGGCCA	2 cut(s)	266, 2082
MroI	TCCGGA	1 cut(s)	34
MroNI	GCCGGC	1 cut(s)	945
MroXI	GAANNNNTTC	1 cut(s)	543
MscI	TGGCCA	2 cut(s)	266, 2082
MseI	TTAA	6 cut(s)	318, 497, 593, 1520, 2369, 2433
MslI	CAYNNNNRTG	3 cut(s)	954, 1383, 1918
Msp20I	TGGCCA	2 cut(s)	266, 2082
MspA1I	CMGCKG	2 cut(s)	209, 1187
MspI	CCGG	7 cut(s)	35, 721, 946, 1327, 1410, 1692, 2182
MspR9I	CCNGG	8 cut(s)	634, 717, 722, 910, 1165, 1238, 1410, 2183
MunI	CAATTG	2 cut(s)	414, 1113
Mva1269I	GAATGC	1 cut(s)	949
MvaI	CCWGG	5 cut(s)	634, 717, 910, 1165, 1238
MwoI	GCNNNNNNNGC	5 cut(s)	892, 1054, 1190, 1742, 1956
NaeI	GCCGGC	1 cut(s)	947
NciI	CCSGG	3 cut(s)	722, 1410, 2183
NdeI	CATATG	2 cut(s)	169, 2224
NgoMIV	GCCGGC	1 cut(s)	945
NlaIV	GGNNCC	7 cut(s)	13, 408, 454, 564, 944, 1269, 1807
NmuCI	GTSAC	5 cut(s)	72, 484, 821, 1342, 1860
NspI	RCATGY	8 cut(s)	590, 879, 995, 1184, 1326, 2075, 2254, 2376
PaeI	GCATGC	4 cut(s)	995, 1184, 2075, 2254
PagI	TCATGA	2 cut(s)	528, 1030
PciI	ACATGT	2 cut(s)	586, 2372
PctI	GAATGC	1 cut(s)	949
PdiI	GCCGGC	1 cut(s)	947
PdmI	GAANNNNTTC	1 cut(s)	543
PfeI	GAWTC	7 cut(s)	104, 343, 364, 620, 689, 739, 1538
PflMI	CCANNNNNTGG	1 cut(s)	2015
PfoI	TCCNGGA	1 cut(s)	1236
PkrI	GCNGC	6 cut(s)	211, 841, 1186, 1527, 1711, 2426
PleI	GAGTC	2 cut(s)	745, 2345
PpsI	GAGTC	2 cut(s)	745, 2345
Ppu21I	YACGTR	1 cut(s)	2325
PpuMI	RGGWCCY	1 cut(s)	335
PscI	ACATGT	2 cut(s)	586, 2372
PshBI	ATTAAT	1 cut(s)	497
Psp124BI	GAGCTC	1 cut(s)	97
Psp5II	RGGWCCY	1 cut(s)	335
Psp6I	CCWGG	5 cut(s)	632, 715, 908, 1163, 1236
PspGI	CCWGG	5 cut(s)	632, 715, 908, 1163, 1236
PspN4I	GGNNCC	7 cut(s)	13, 408, 454, 564, 944, 1269, 1807
PspPI	GGNCC	8 cut(s)	173, 193, 335, 452, 1412, 1441, 1806, 2203
PspPPI	RGGWCCY	1 cut(s)	335
PstI	CTGCAG	1 cut(s)	2151
PsuI	RGATCY	5 cut(s)	406, 852, 869, 1267, 2108
PvuII	CAGCTG	1 cut(s)	1187
RsaI	GTAC	5 cut(s)	205, 389, 552, 1642, 2323
RsaNI	GTAC	5 cut(s)	204, 388, 551, 1641, 2322
RseI	CAYNNNNRTG	3 cut(s)	954, 1383, 1918
SacI	GAGCTC	1 cut(s)	97
SaqAI	TTAA	6 cut(s)	318, 497, 593, 1520, 2369, 2433
SatI	GCNGC	6 cut(s)	210, 840, 1185, 1526, 1710, 2425
Sau96I	GGNCC	8 cut(s)	173, 193, 335, 452, 1412, 1441, 1806, 2203
SchI	GAGTC	2 cut(s)	745, 2345
ScrFI	CCNGG	8 cut(s)	634, 717, 722, 910, 1165, 1238, 1410, 2183
SduI	GDGCHC	6 cut(s)	97, 275, 508, 1043, 1410, 1886
SfcI	CTRYAG	1 cut(s)	2147
SinI	GGWCC	7 cut(s)	173, 335, 452, 1412, 1441, 1806, 2203
SmiMI	CAYNNNNRTG	3 cut(s)	954, 1383, 1918
SmlI	CTYRAG	3 cut(s)	865, 2026, 2190
SmoI	CTYRAG	3 cut(s)	865, 2026, 2190
SnaBI	TACGTA	1 cut(s)	2325
SphI	GCATGC	4 cut(s)	995, 1184, 2075, 2254
Sse9I	AATT	8 cut(s)	414, 428, 1113, 1372, 1508, 1795, 2260, 2430
SsiI	CCGC	7 cut(s)	108, 207, 1204, 1896, 2242, 2248, 2425
SspI	AATATT	2 cut(s)	1423, 1685
SspMI	CTAG	4 cut(s)	357, 624, 1014, 1586
SstI	GAGCTC	1 cut(s)	97
StyD4I	CCNGG	8 cut(s)	632, 715, 720, 908, 1163, 1236, 1408, 2181
StyI	CCWWGG	5 cut(s)	356, 897, 1066, 1305, 1644
TaaI	ACNGT	4 cut(s)	810, 974, 985, 1302
TaiI	ACGT	6 cut(s)	245, 278, 969, 1201, 1642, 2327
TaqI	TCGA	4 cut(s)	649, 763, 1514, 2089
TaqII	GACCGA	1 cut(s)	1389
TasI	AATT	8 cut(s)	414, 428, 1113, 1372, 1508, 1795, 2260, 2430
TatI	WGTACW	1 cut(s)	550
TauI	GCSGC	1 cut(s)	2427
TfiI	GAWTC	7 cut(s)	104, 343, 364, 620, 689, 739, 1538
Tru1I	TTAA	6 cut(s)	318, 497, 593, 1520, 2369, 2433
Tru9I	TTAA	6 cut(s)	318, 497, 593, 1520, 2369, 2433
TscAI	CASTG	9 cut(s)	408, 463, 573, 977, 1222, 1260, 1305, 1390, 2172
TseFI	GTSAC	5 cut(s)	72, 484, 821, 1342, 1860
TseI	GCWGC	5 cut(s)	209, 839, 1184, 1525, 1709
Tsp45I	GTSAC	5 cut(s)	72, 484, 821, 1342, 1860
TspGWI	ACGGA	2 cut(s)	128, 503
TspRI	CASTG	9 cut(s)	408, 463, 573, 977, 1222, 1260, 1305, 1390, 2172
Van91I	CCANNNNNTGG	1 cut(s)	2015
VpaK11BI	GGWCC	7 cut(s)	173, 335, 452, 1412, 1441, 1806, 2203
VspI	ATTAAT	1 cut(s)	497
XapI	RAATTY	2 cut(s)	428, 1795
XceI	RCATGY	8 cut(s)	590, 879, 995, 1184, 1326, 2075, 2254, 2376
XcmI	CCANNNNNNNNNTGG	3 cut(s)	259, 677, 1073
XmaJI	CCTAGG	1 cut(s)	356
XmiI	GTMKAC	1 cut(s)	583
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	4 cut(s)	357, 624, 1014, 1586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.