Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003038

Physical Location & Seq

Genomic Coordinates Reverse (-)

37719288 .. 37723506

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002663

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGGAAGATGGTGTTTCATCACCAGCTACCATGCTGGGAGTTCCAACTGATTCCGCAATGGATTTAGACTTCATGGATGAATTGTTCTTAGATGGATGCTGGTTGGAAACAATAGATGGAGCTGGATTTCCTAATCAGAGTCCCCTCAGTTCTGGTGCCATTTTGGACTCCCCGTTTTTCTGGCCTACTTTGGGGACCAATGGAAACTTCAGCACGAACCCATTTCAGACCAGTAATCAAGAAGAGACACAGACACCACTGTTCAATGAACTCCAGGAAGAACCTCCAACCAACATGCAGTCTCCTAGCCAGAATATGACAGATGTTGTCAGGTACTCTGGTCAATCAGGAAATCATATTATTGAAGGTCATGATTTCAGTAGAGGTATCTGGATTGGTCCCATAGAGAATCAAGTTTCTGCACCATCTGTGATGGAGAGATTAAAGAGGGCACTTGTGTACATGAAAGATGTCATGAGAGACAAAAATGTTCTTCTACAGGTATGGCTGCCTGTAAATAGAGGGGGTAGACGTGTTTTAACAACTAATGATCTACTTTCCTCACTTGATTCTAGCTGTCCAAGGCTTGCCAAGTATCACGACATCTCTGTGAATTATCAGTTCTCAACTGGAGAAGATTCTAACGAGTTTGTCAAGGGGTTGCCTGGTCGTGTTTTCTCAGGTAAGGTTCCTGAGTGGACTCCTGATGTTCGATTGTTTAGAAGTGACGAGTACCCACGGGTTGATGATGCTCAACGGTATGATGTACGTGGAACTCTTGCCCTTCCGATCTTTGAACAAGGTAGTAGAACTTGCTTGGGTGTAATTGAGGTTGTTATGACCACCCAGAAGATGCAGTATCAACCTGAGCTTGAAAGTGTTTGCAAGGCACTCGAGGCTGTTGATCTTCGGACTTCAAAAAATTTGAATACTCATAATTTAAAGGCGAGTGACAAGCCCTACAGAGCTGCATTACCTGAGATCCGAGAGGTCTTGAGATCTGCATGTGAGACGCACAACTTGCCCTTGGCACAAACTTGGGTGTTATGCATCCAACAAGGCAAAGATGGATGCCGACATTCTGATGACAACTACGTTCACTGTGTTTCAACTATGGATGATGCTTGCCATGTGACTTATCCTTATATCAAGGGTTTTCATGAAGCTTGCTCAGAGCATCACTTGTTAAAAGGCCAAGGCATTGTTGGGAGAGCTTTTATGACTAATCAACCATGCTTCTCAAATGATATAACTTCCTTAGCCAAAACAGAGTATCCTTTATCTCACCATGCCAGGATGTTTAGATTGCATGCAGCTGTTGCAATACGTCTACGGAGCATCCACACTGGTTCAACTGATTTTGTCCTGGAGTTCTTCTTGCCAGTGGACTGCAGGGATCCTGAACAACACAAGAAGATGCTAACTTCACTGTCTTTAATCATACAAAATATCTGCCGGAGCTTACGGGTTGTCACAGACAAGGAATTAAAGGAAGAAACAGATTTGCCAGTTAGTGAAGTGATAGTCCCTTCAGATACCAGGCCTAGTGGTATTTCCTCTTTTGCAGAGGTGCAACAGACTGATAATGATGTCTCAATATTCCCAAAGGAAAAGGCAAGGAAGATGCCTAGTGCGAAATCCTCAAAGTTGAGGCCACAAGACTTGAACAAAAAAGAAGGTGTTGATTGTGTTGAAGAGTTTTCTATATTCGGTGAGGGTAGCTTCTCAATTGTTGGTGCGAGTAAGACCGGAGAGAAACGACGTACCAAGGCAGAGAAAGCTATCACCTTGGAAGTTCTTCGAAAATATTTTTCTGGTAGCCTGAAAGATGCTGCAAAGAGTCTTGGAGTTTGCTCCACAACCTTGAAAAGGATATGCCGACAACATGGGATTAAACGTTGGCCATCTCGAAAAATCAAGAAGGTTGGTCATTCCTTAGAGAAACTCCAACGGGTAATTGATTCAGTCCAAGGTGCGTCCGGTGCTTTCCAAATCAATTCTTTCTATACAAGCTATCCAGAGCTGGCCTCTCCAAATTTGTCTGGGACCAGCCCATTTTCAACTTCAAAGCTGATTGATCGGCCAAGGCCATCAGACGTGCCACCTGAAGGTGGTGTTTTGAGTCCCCAAGCTACTGCATCAAAATCCCCCTCATCCTCATGTAGTCAGTGTTCCAGTTCAAGCCAGTGCTGTTCCAGCAAGACAGAGCAGCATCTTCCCACATGGAGCATCGCAGATAATGACGATCCAATTGCTGGAGATAATAGAGTGCTGAAGAGGGTCAGAAGTGAAGCAGAGTTGAATGTCCTTCGTCAAGGTGGAGTGGATGAGCTAATGCAAAGAACCCAGAGCCATAAATATCTCAGTGAGCAACAAAACTTGCAGTCTTTTCAACCTCCACTGAAATATGATGGCCAGATAGCTCAAGAAGGGGATGCTCGAAGAGTAAAAGTCGCATATGGGGATGAGAAAACTCGATTTCGCATTCAAAATAACTGGAGATATGAAGATTTGGGGCAAGAAATCGCAAAGCGATTTGGTATAGAGGACATGAGTAGATTTGATATGAAGTACTTGGATGATGATTCAGAGTGGATCTTGTTAACATGTGATGCAGATTTAGATGAGTGCCTTGATGTATGTCGCTCTTCACGATGCAGTACAATTAAGCTCACCCTCCAGCTTTCTCGTCGTCATTTAGAAAGGTTCTCAGGTAGTAGTGGCCCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

911

Amino Acids

101.86

Weight (kDa)

6.21

Isoelectric Point (pI)

53.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	317 - 489	6e-83	NLP protein GAF domain
RWP-RK	PF02042	595 - 642	1.4e-23	RWP-RK domain
PB1	PF00564	814 - 894	1.1e-19	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20640 AT1G20640 AT1G20640 AT1G76350 AT1G76350 AT1G76350 AT1G76350
fragaria_vesca	FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270
malus_domestica	MD06G1009200.v1.1 MD16G1285500.v1.1
prunus_persica	Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1
pyrus_communis	pycom06g00770 pycom16g25880
rosa_chinensis	RchiOBHm_Chr7g0215411
rosa_laevigata	RLG00000002660 RLG00000002663
rosa_multiflora	Rmu_co8448299.1_g000001 Rmu_sc0000355.1_g000001 Rmu_sc0005928.1_g000011
rosa_roxburghii	Rroxscaffold_3G00244210
rosa_rugosa	Rorug07G0153300 Rorug07G0153400
rosa_samantha	Rh7AG289800 Rh7BG281700 Rh7CG309400 Rh7DG293400
rosa_wichuraiana	Rw7G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	155
AccB7I	CCANNNNNTGG	1 cut(s)	2255
AccI	GTMKAC	2 cut(s)	529, 1330
AciI	CCGC	1 cut(s)	54
AclI	AACGTT	1 cut(s)	1897
AclWI	GGATC	5 cut(s)	976, 1391, 1404, 2240, 2603
AcoI	YGGCCR	3 cut(s)	1901, 2081, 2413
AcsI	RAATTY	2 cut(s)	922, 2035
AcuI	CTGAAG	4 cut(s)	193, 1515, 2127, 2294
AfaI	GTAC	7 cut(s)	335, 461, 734, 768, 1765, 2573, 2662
AfiI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
AflIII	ACRYGT	2 cut(s)	532, 2606
AjiI	CACGTC	2 cut(s)	533, 2098
AjnI	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
AjuI	GAANNNNNNNTTGG	2 cut(s)	191, 223
AloI	GAACNNNNNNTCC	2 cut(s)	68, 100
Alw26I	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
AlwI	GGATC	5 cut(s)	976, 1391, 1404, 2240, 2603
Ama87I	CYCGRG	1 cut(s)	893
ApeKI	GCWGC	5 cut(s)	508, 968, 1313, 1832, 2209
ApoI	RAATTY	2 cut(s)	922, 2035
Asp700I	GAANNNNTTC	1 cut(s)	1797
AspS9I	GGNCC	4 cut(s)	195, 398, 2046, 2723
AsuHPI	GGTGA	5 cut(s)	12, 1277, 1724, 1777, 2665
AsuII	TTCGAA	1 cut(s)	1801
AvaI	CYCGRG	1 cut(s)	893
AvaII	GGWCC	3 cut(s)	195, 398, 2046
BaeGI	GKGCMC	1 cut(s)	454
BaeI	ACNNNNGTAYC	2 cut(s)	325, 358
BalI	TGGCCA	2 cut(s)	1903, 2415
BamHI	GGATCC	1 cut(s)	1396
BanI	GGYRCC	1 cut(s)	155
BarI	GAAGNNNNNNTAC	1 cut(s)	2710
BbvI	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BccI	CCATC	9 cut(s)	2, 86, 110, 427, 433, 1061, 1912, 2098, 2405
BcgI	CGANNNNNNTGC	4 cut(s)	874, 908, 2234, 2268
BciT130I	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BciVI	GTATCC	1 cut(s)	1284
BcoDI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BfaI	CTAG	4 cut(s)	306, 573, 1545, 1629
BfmI	CTRYAG	3 cut(s)	497, 961, 1390
BfuI	GTATCC	1 cut(s)	1284
BglII	AGATCT	1 cut(s)	998
BisI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
BlsI	GCNGC	5 cut(s)	510, 970, 1315, 1834, 2211
BmcAI	AGTACT	1 cut(s)	2573
Bme1390I	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
Bme18I	GGWCC	3 cut(s)	195, 398, 2046
BmeT110I	CYCGRG	1 cut(s)	893
BmgBI	CACGTC	2 cut(s)	533, 2098
BmgT120I	GGNCC	4 cut(s)	195, 398, 2046, 2723
BmiI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
BmrFI	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
BplI	GAGNNNNNCTC	2 cut(s)	2012, 2044
BpmI	CTGGAG	6 cut(s)	257, 651, 1388, 2277, 2518, 2663
Bpu10I	CCTNAGC	2 cut(s)	867, 1258
Bpu14I	TTCGAA	1 cut(s)	1801
BpuEI	CTTGAG	2 cut(s)	1015, 2409
BsaAI	YACGTR	1 cut(s)	770
BsaJI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BsaWI	WCCGGW	2 cut(s)	1748, 1979
Bsc4I	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
Bse1I	ACTGG	8 cut(s)	231, 634, 1351, 1382, 1508, 2175, 2185, 2501
Bse3DI	GCAATG	1 cut(s)	63
BseBI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BseDI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BseLI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
BseMI	GCAATG	1 cut(s)	63
BseMII	CTCAG	8 cut(s)	160, 684, 693, 858, 969, 1185, 2377, 2724
BseNI	ACTGG	8 cut(s)	231, 634, 1351, 1382, 1508, 2175, 2185, 2501
BseSI	GKGCMC	1 cut(s)	454
BseXI	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	1 cut(s)	405
BshNI	GGYRCC	1 cut(s)	155
BsiHKCI	CYCGRG	1 cut(s)	893
BsiSI	CCGG	3 cut(s)	1456, 1749, 1980
BslFI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
BslI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
BsmAI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BsmBI	CGTCTC	1 cut(s)	1004
BsmFI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
BsmI	GAATGC	1 cut(s)	2484
BsoBI	CYCGRG	1 cut(s)	893
Bsp119I	TTCGAA	1 cut(s)	1801
Bsp1286I	GDGCHC	1 cut(s)	454
Bsp1407I	TGTACA	1 cut(s)	459
Bsp143I	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
BspACI	CCGC	1 cut(s)	54
BspCNI	CTCAG	8 cut(s)	159, 685, 692, 859, 970, 1184, 2376, 2723
BspHI	TCATGA	4 cut(s)	370, 474, 1159, 2729
BspLI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
BspMAI	CTGCAG	1 cut(s)	1394
BspPI	GGATC	5 cut(s)	976, 1391, 1404, 2240, 2603
BspQI	GCTCTTC	1 cut(s)	2653
BspT104I	TTCGAA	1 cut(s)	1801
BspT107I	GGYRCC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	63
BsrGI	TGTACA	1 cut(s)	459
BsrI	ACTGG	8 cut(s)	231, 634, 1351, 1382, 1508, 2175, 2185, 2501
BssECI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BssMI	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
BssT1I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Bst2UI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
Bst4CI	ACNGT	4 cut(s)	261, 759, 1103, 1431
Bst6I	CTCTTC	5 cut(s)	237, 1689, 2270, 2437, 2653
BstAPI	GCANNNNNTGC	2 cut(s)	1021, 1319
BstAUI	TGTACA	1 cut(s)	459
BstBAI	YACGTR	1 cut(s)	770
BstBI	TTCGAA	1 cut(s)	1801
BstC8I	GCNNGC	5 cut(s)	588, 1126, 1168, 1311, 2025
BstDSI	CCRYGG	1 cut(s)	737
BstENI	CCTNNNNNAGG	1 cut(s)	1867
BstKTI	GATC	9 cut(s)	553, 792, 907, 984, 1001, 1399, 2080, 2248, 2598
BstMAI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BstMBI	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
BstMWI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
BstNI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BstNSI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
BstSCI	CCNGG	5 cut(s)	273, 664, 1292, 1365, 1538
BstSFI	CTRYAG	3 cut(s)	497, 961, 1390
BstSLI	GKGCMC	1 cut(s)	454
BstV1I	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BstX2I	RGATCY	4 cut(s)	981, 998, 1396, 2595
BstYI	RGATCY	4 cut(s)	981, 998, 1396, 2595
BsuI	GTATCC	1 cut(s)	1284
BtgI	CCRYGG	1 cut(s)	737
BtgZI	GCGATG	1 cut(s)	2215
BtrI	CACGTC	2 cut(s)	533, 2098
BtsIMutI	CAGTG	9 cut(s)	257, 1099, 1344, 1389, 1427, 2174, 2192, 2371, 2399
Cac8I	GCNNGC	5 cut(s)	588, 1126, 1168, 1311, 2025
CciI	TCATGA	4 cut(s)	370, 474, 1159, 2729
Cfr13I	GGNCC	4 cut(s)	195, 398, 2046, 2723
CseI	GACGC	2 cut(s)	1021, 1965
Csp6I	GTAC	7 cut(s)	334, 460, 733, 767, 1764, 2572, 2661
CspCI	CAANNNNNGTGG	2 cut(s)	1644, 1679
CviQI	GTAC	7 cut(s)	334, 460, 733, 767, 1764, 2572, 2661
DpnI	GATC	9 cut(s)	552, 791, 906, 983, 1000, 1398, 2079, 2247, 2597
DpnII	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
DraI	TTTAAA	1 cut(s)	942
EaeI	YGGCCR	3 cut(s)	1901, 2081, 2413
Eam1104I	CTCTTC	5 cut(s)	237, 1689, 2270, 2437, 2653
EarI	CTCTTC	5 cut(s)	237, 1689, 2270, 2437, 2653
Eco130I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Eco147I	AGGCCT	1 cut(s)	1543
Eco47I	GGWCC	3 cut(s)	195, 398, 2046
Eco57I	CTGAAG	4 cut(s)	193, 1515, 2127, 2294
Eco88I	CYCGRG	1 cut(s)	893
EcoNI	CCTNNNNNAGG	1 cut(s)	1867
EcoRII	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
EcoT14I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
EcoT22I	ATGCAT	1 cut(s)	1052
ErhI	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Esp3I	CGTCTC	1 cut(s)	1004
FaqI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
FauNDI	CATATG	1 cut(s)	2458
FblI	GTMKAC	2 cut(s)	529, 1330
Fnu4HI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
Fsp4HI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
FspBI	CTAG	4 cut(s)	306, 573, 1545, 1629
GluI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	6 cut(s)	257, 651, 1388, 2277, 2518, 2663
HapII	CCGG	3 cut(s)	1456, 1749, 1980
HgaI	GACGC	2 cut(s)	1021, 1965
HincII	GTYRAC	1 cut(s)	2604
HindII	GTYRAC	1 cut(s)	2604
HindIII	AAGCTT	1 cut(s)	1164
HpaI	GTTAAC	1 cut(s)	2604
HpaII	CCGG	3 cut(s)	1456, 1749, 1980
HphI	GGTGA	5 cut(s)	12, 1277, 1724, 1777, 2665
Hpy166II	GTNNAC	7 cut(s)	460, 530, 699, 1099, 1331, 1387, 2604
Hpy8I	GTNNAC	7 cut(s)	460, 530, 699, 1099, 1331, 1387, 2604
Hpy99I	CGWCG	2 cut(s)	1764, 2694
HpyAV	CCTTC	8 cut(s)	359, 794, 1539, 1670, 1915, 2102, 2318, 2423
HpyCH4III	ACNGT	4 cut(s)	261, 759, 1103, 1431
HpyCH4IV	ACGT	7 cut(s)	532, 769, 1095, 1327, 1762, 1897, 2097
HpyF10VI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
HpySE526I	ACGT	7 cut(s)	532, 769, 1095, 1327, 1762, 1897, 2097
KspAI	GTTAAC	1 cut(s)	2604
Kzo9I	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
LguI	GCTCTTC	1 cut(s)	2653
LmnI	GCTCC	5 cut(s)	119, 1335, 1458, 1859, 2226
Lsp1109I	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
MaeI	CTAG	4 cut(s)	306, 573, 1545, 1629
MaeII	ACGT	7 cut(s)	532, 769, 1095, 1327, 1762, 1897, 2097
MaeIII	GTNAC	4 cut(s)	725, 950, 1132, 1471
MalI	GATC	9 cut(s)	552, 791, 906, 983, 1000, 1398, 2079, 2247, 2597
MboI	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
MfeI	CAATTG	2 cut(s)	1728, 2250
MflI	RGATCY	4 cut(s)	981, 998, 1396, 2595
MhlI	GDGCHC	1 cut(s)	454
MlsI	TGGCCA	2 cut(s)	1903, 2415
MluNI	TGGCCA	2 cut(s)	1903, 2415
MlyI	GAGTC	5 cut(s)	148, 161, 694, 1849, 2131
MmeI	TCCRAC	5 cut(s)	68, 84, 311, 1078, 1972
Mox20I	TGGCCA	2 cut(s)	1903, 2415
Mph1103I	ATGCAT	1 cut(s)	1052
MroXI	GAANNNNTTC	1 cut(s)	1797
MscI	TGGCCA	2 cut(s)	1903, 2415
MseI	TTAA	9 cut(s)	443, 539, 941, 1187, 1436, 1487, 1893, 2603, 2667
MslI	CAYNNNNRTG	3 cut(s)	608, 1083, 2158
Msp20I	TGGCCA	2 cut(s)	1903, 2415
MspA1I	CMGCKG	1 cut(s)	1316
MspI	CCGG	3 cut(s)	1456, 1749, 1980
MspR9I	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
MunI	CAATTG	2 cut(s)	1728, 2250
Mva1269I	GAATGC	1 cut(s)	2484
MvaI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
MwoI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
NdeI	CATATG	1 cut(s)	2458
NdeII	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
NlaIV	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
NmuCI	GTSAC	4 cut(s)	725, 950, 1132, 1471
NsiI	ATGCAT	1 cut(s)	1052
NspI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
NspV	TTCGAA	1 cut(s)	1801
PaeI	GCATGC	1 cut(s)	1313
PaeR7I	CTCGAG	1 cut(s)	893
PagI	TCATGA	4 cut(s)	370, 474, 1159, 2729
PceI	AGGCCT	1 cut(s)	1543
PciI	ACATGT	1 cut(s)	2606
PciSI	GCTCTTC	1 cut(s)	2653
PcsI	WCGNNNNNNNCGW	1 cut(s)	2650
PctI	GAATGC	1 cut(s)	2484
PdmI	GAANNNNTTC	1 cut(s)	1797
PfeI	GAWTC	6 cut(s)	50, 409, 569, 638, 1961, 2585
PflMI	CCANNNNNTGG	1 cut(s)	2255
PfoI	TCCNGGA	2 cut(s)	273, 1365
PkrI	GCNGC	5 cut(s)	510, 970, 1315, 1834, 2211
PleI	GAGTC	5 cut(s)	147, 161, 694, 1848, 2130
PpsI	GAGTC	5 cut(s)	147, 161, 694, 1848, 2130
Ppu21I	YACGTR	1 cut(s)	770
PscI	ACATGT	1 cut(s)	2606
Psp1406I	AACGTT	1 cut(s)	1897
Psp6I	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
PspN4I	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
PspPI	GGNCC	4 cut(s)	195, 398, 2046, 2723
PspXI	VCTCGAGB	1 cut(s)	893
PsrI	GAACNNNNNNTAC	2 cut(s)	2155, 2187
PstI	CTGCAG	1 cut(s)	1394
PsuI	RGATCY	4 cut(s)	981, 998, 1396, 2595
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	7 cut(s)	335, 461, 734, 768, 1765, 2573, 2662
RsaNI	GTAC	7 cut(s)	334, 460, 733, 767, 1764, 2572, 2661
RseI	CAYNNNNRTG	3 cut(s)	608, 1083, 2158
SapI	GCTCTTC	1 cut(s)	2653
SaqAI	TTAA	9 cut(s)	443, 539, 941, 1187, 1436, 1487, 1893, 2603, 2667
SatI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
Sau3AI	GATC	9 cut(s)	550, 789, 904, 981, 998, 1396, 2077, 2245, 2595
Sau96I	GGNCC	4 cut(s)	195, 398, 2046, 2723
ScaI	AGTACT	1 cut(s)	2573
SchI	GAGTC	5 cut(s)	148, 161, 694, 1849, 2131
ScrFI	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
SduI	GDGCHC	1 cut(s)	454
SfcI	CTRYAG	3 cut(s)	497, 961, 1390
Sfr274I	CTCGAG	1 cut(s)	893
SfuI	TTCGAA	1 cut(s)	1801
SinI	GGWCC	3 cut(s)	195, 398, 2046
SlaI	CTCGAG	1 cut(s)	893
SmiMI	CAYNNNNRTG	3 cut(s)	608, 1083, 2158
SmlI	CTYRAG	3 cut(s)	893, 994, 2424
SmoI	CTYRAG	3 cut(s)	893, 994, 2424
SphI	GCATGC	1 cut(s)	1313
SseBI	AGGCCT	1 cut(s)	1543
SsiI	CCGC	1 cut(s)	54
SspI	AATATT	2 cut(s)	1599, 1808
SspMI	CTAG	4 cut(s)	306, 573, 1545, 1629
StuI	AGGCCT	1 cut(s)	1543
StyD4I	CCNGG	5 cut(s)	273, 664, 1292, 1365, 1538
StyI	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
TaaI	ACNGT	4 cut(s)	261, 759, 1103, 1431
TaiI	ACGT	7 cut(s)	535, 772, 1098, 1330, 1765, 1900, 2100
TaqI	TCGA	6 cut(s)	712, 894, 1801, 1909, 2440, 2476
TatI	WGTACW	3 cut(s)	459, 2571, 2660
TfiI	GAWTC	6 cut(s)	50, 409, 569, 638, 1961, 2585
Tru1I	TTAA	9 cut(s)	443, 539, 941, 1187, 1436, 1487, 1893, 2603, 2667
Tru9I	TTAA	9 cut(s)	443, 539, 941, 1187, 1436, 1487, 1893, 2603, 2667
TscAI	CASTG	9 cut(s)	264, 1106, 1351, 1389, 1434, 2174, 2192, 2371, 2406
TseFI	GTSAC	4 cut(s)	725, 950, 1132, 1471
TseI	GCWGC	5 cut(s)	508, 968, 1313, 1832, 2209
Tsp45I	GTSAC	4 cut(s)	725, 950, 1132, 1471
TspGWI	ACGGA	1 cut(s)	1348
TspRI	CASTG	9 cut(s)	264, 1106, 1351, 1389, 1434, 2174, 2192, 2371, 2406
Van91I	CCANNNNNTGG	1 cut(s)	2255
VpaK11BI	GGWCC	3 cut(s)	195, 398, 2046
XagI	CCTNNNNNAGG	1 cut(s)	1867
XapI	RAATTY	2 cut(s)	922, 2035
XceI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1202
XhoI	CTCGAG	1 cut(s)	893
XmiI	GTMKAC	2 cut(s)	529, 1330
XmnI	GAANNNNTTC	1 cut(s)	1797
XspI	CTAG	4 cut(s)	306, 573, 1545, 1629
ZrmI	AGTACT	1 cut(s)	2573
Zsp2I	ATGCAT	1 cut(s)	1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.