Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003038

Physical Location & Seq

Genomic Coordinates Forward (+)

30740072 .. 30744232

Gene Structure 4161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G024760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGGAAGATGGTGTTTCATCACCAGCTACCATGCTGGGAGCTCCAACTGATTCCGCAATGGATTTAGACTTCATGGATGAATTGTTCTTAGATGGATGCTGGTTGGAAACAATAGATGGAGCTGGATTTCCTAATCAGAGTCCCCTCAGTTCTGGTGCCATTTTGGACTCCTCGTCTTTCTGGCCTACTTTGGGGACCAATGGAAATTTCAGCACGAACCCATTTCAGACCAGTAATCAAGAAGAGACACATACACCACTGTTCAATGAACTCCAGGAAGAAGCTCCAGCCAACATGCAGTCTCCTAGCCCGAATATGACAGATGTTGTCAGGTACTCTGGTCAATCAGGAAATCATATTATTGAAGGTCATGATTTCAGTAGAGGTATCTGGATTGGTCCCATAGAGAATCAAGTTTCTGCACCATCTGTGGTGGAGAGATTAAAGAGGGCACTTGTGGACATGAAAGATGTCATGAGAGACAAAAATGTTCTTGTACAGGTATGGCTGCCTGTAAATAGAGGGGGTAGACGTGTTTTAGCAACTAATGATCTACTTTCCTCACTTGATTCTAGCTGTCCAAGGCTTGCCAAGTATCACGACATCTCTGTGAATTATCAGTTCTCAACTGGAGAAGATTCTAAGGAGTTTGTCAAGGGGTTGCCTGGTCGTGTTTTCTCAGGTAAGGTTCCTGAGTGGACTCCTGATGTTCGATTATTTAGAAGTGATGAGTACCCACGGGTTGATGATGCTCAACGGTATGATGTACGAGGAACTCTTGCCCTTCCGATCTTTGAACAAGGTAGTAGAACTTGCTTGGGTGTAATTGAGGTTGTTACGACCACCCAGAAGATGCAGTATCAACCTGAGCTTGAAAGTGTTTGCAAGGCACTTGAGGCTGTTGATCTTCGGAGTTCAAAAAATTTGAATACTCATAATTTAAAGGCGAGTGACAAGCCCTACAGAGCTGCATTACCTGAGATCCGAGAGGTCTTGAGATCTGCATGTGAGACGCACAACTTGCCCTTGGCACAAACGTGGGTGTTGTGCATCCAACAAGGCAAAGATGGTTGCCGACATTCTGATGACAACTACATTCACTGTGTTTCAACTGTGGATGATGCTTGCCATGTGACTTATCCTTATATCAAGGGTTTTCATGAAGCTTGCTCTGAGCATCACTTGTTAAAAGGCCAAGGCATTGTTGGGAGAGCTTTTATGACTAATCAACCATGCTTCTCAAATGATATAACTTCCTTAGCCAAAACAGAGTATCCTTTATCTCACCATGCCAGGATGTTAGGATTGCATGCAGCTGTTGCAATACGTCTACGGAGCATCCACACTGGTTCAACTGATTTTGTCCTGGAGTTCTTCTTGCCAGTGGACTGCAGGGATCCTGAACAACACAAGAAGATGCTAACTTCACTGTCTTTAATCATACAAAATATCTGCCGGAGCTTACGGGTTGTCACAGACAAGGAATTAAAGGAAGAAACAGATTTGCCAGTCAGTGAAGTGATAGTCCCTTCAGATACCAGGCCTAGTGGTATTTCCTCTTTTGCAGAGGTGCAACAGACTGATAATGATGTCTCAATATTCCCAAAGGAAAAGGCAAGGAAGATGCCGAGTGCGAAATCCTCAAAGTTGAGGCCACAAGACTTGAACAAAAAAGAAGGTGTTGACTGTGTTGGAGAGTTTTCTACATTCGGTGGGGGTAGCTTCTCAAGTGTTGGTGCGAGTAAGACCGGAGAGAAAAGACGTACCAAGGCGGAGAAAGCTATCACCTTGGAAGTTCTTCGAAAATATTTTTCTGGTAGCCTGAAAGATGCTGCAAAGAGTCTTGGAGTTTGCTCCACAACCTTGAAAAGGATATGCCGACAACATGGGATTAAACGTTGGCCATCTCGAAAAATCAAGAAGGTTGGTCACTCCTTAGAGAAACTCCAACGTGTAATTGATTCAGTCCAAGGTGCGTCCAGTGCTTTCCAAATCAATTCTTTCTATACAAGCTATCCAGAGCTAGCCTCTCCAAATTTGTCTGGGACCAGCCCATTTTCAACTTCAAATCTGATTGATCGGCCAAGGCCATCAGACGTGCCACCTGTAGGTGGTGTTTTGAGTCCCCAAGCTACTGCATCAAAATCTCCCTCATCCTCATGTAGTCAGTGTTCCAGTTCAAGCCAGTGCTGTTCCAGCAAGACAGAGCAGCATCTTCCCACATGGAGCATCGCAGATAATGACGATCCAATTGCTGGAGATAATAGAGTGCTGAAAAGGGTCAGAAGTGAAGCAGAGTTGAATGCCCTTCGTCAAGGTGGAGTGGATGAGCTGATGCAAAGATCCCAGAGCCATAAATATCTCAGTGAGCAACAAAACTTGCAGTCTTTTCGACCTCCACTGAAATGTGATGGCCAGATAGCTCAAGAAGGGGATGCTCGAAGAGTAAAAGTGGCATATGGGGATGAGAAAACTCGATTTCGCATTCAAAATAACTGGAGATATGAAGATTTGGGGCAAGAAATCGCAAAGCGATTTGGTATAGAGGACATGAGTAGATTTGATATGAAGTACTTGGACGATGATTCAGAGTGGATCTTGTTAACATGTGATGCAGATTTAGATGAGTGCCTTGATGTATGTCGCTCTTCACGATGCAGTACAATTAAGCTCTCCCTCCAGCTTTCTCGTCGTCATTTAGAAAGGTTCTCAGGTAGCAGTGGCCCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

910

Amino Acids

101.09

Weight (kDa)

6.37

Isoelectric Point (pI)

54.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	317 - 489	7.3e-83	NLP protein GAF domain
RWP-RK	PF02042	595 - 642	1.4e-23	RWP-RK domain
PB1	PF00564	814 - 894	1.4e-19	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20640 AT1G20640 AT1G20640 AT1G76350 AT1G76350 AT1G76350 AT1G76350
fragaria_vesca	FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270
malus_domestica	MD06G1009200.v1.1 MD16G1285500.v1.1
prunus_persica	Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1
pyrus_communis	pycom06g00770 pycom16g25880
rosa_chinensis	RchiOBHm_Chr7g0215411
rosa_laevigata	RLG00000002660 RLG00000002663
rosa_multiflora	Rmu_co8448299.1_g000001 Rmu_sc0000355.1_g000001 Rmu_sc0005928.1_g000011
rosa_roxburghii	Rroxscaffold_3G00244210
rosa_rugosa	Rorug07G0153300 Rorug07G0153400
rosa_samantha	Rh7AG289800 Rh7BG281700 Rh7CG309400 Rh7DG293400
rosa_wichuraiana	Rw7G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	155
AccB7I	CCANNNNNTGG	1 cut(s)	2255
AccI	GTMKAC	2 cut(s)	529, 1330
AciI	CCGC	2 cut(s)	54, 1772
AclI	AACGTT	1 cut(s)	1897
AclWI	GGATC	6 cut(s)	976, 1391, 1404, 2240, 2337, 2603
AcoI	YGGCCR	3 cut(s)	1901, 2081, 2413
AcsI	RAATTY	3 cut(s)	205, 922, 2035
AcuI	CTGAAG	1 cut(s)	1515
AfaI	GTAC	7 cut(s)	335, 498, 734, 768, 1765, 2573, 2662
AfiI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
AflIII	ACRYGT	3 cut(s)	532, 1951, 2606
AhdI	GACNNNNNGTC	1 cut(s)	172
AjiI	CACGTC	2 cut(s)	533, 2098
AjnI	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
AjuI	GAANNNNNNNTTGG	2 cut(s)	191, 223
AleI	CACNNNNGTG	1 cut(s)	1036
AloI	GAACNNNNNNTCC	2 cut(s)	68, 100
Alw21I	GWGCWC	1 cut(s)	43
Alw26I	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
AlwI	GGATC	6 cut(s)	976, 1391, 1404, 2240, 2337, 2603
AoxI	GGCC	9 cut(s)	182, 1192, 1541, 1652, 1901, 2081, 2087, 2413, 2722
ApeKI	GCWGC	5 cut(s)	508, 968, 1313, 1832, 2209
ApoI	RAATTY	3 cut(s)	205, 922, 2035
Asp700I	GAANNNNTTC	1 cut(s)	1797
AspS9I	GGNCC	4 cut(s)	195, 398, 2046, 2723
AsuHPI	GGTGA	3 cut(s)	12, 1277, 1777
AsuII	TTCGAA	1 cut(s)	1801
AsuNHI	GCTAGC	1 cut(s)	2023
AvaII	GGWCC	3 cut(s)	195, 398, 2046
BaeGI	GKGCMC	1 cut(s)	454
BaeI	ACNNNNGTAYC	2 cut(s)	325, 358
BalI	TGGCCA	2 cut(s)	1903, 2415
BamHI	GGATCC	1 cut(s)	1396
BanI	GGYRCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	43
Bbv12I	GWGCWC	1 cut(s)	43
BbvI	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BccI	CCATC	8 cut(s)	2, 86, 110, 433, 1061, 1912, 2098, 2405
BcgI	CGANNNNNNTGC	4 cut(s)	2234, 2268, 2372, 2406
BciT130I	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BciVI	GTATCC	1 cut(s)	1284
BcoDI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BfaI	CTAG	4 cut(s)	306, 573, 1545, 2024
BfmI	CTRYAG	3 cut(s)	961, 1390, 2106
BfuI	GTATCC	1 cut(s)	1284
BglII	AGATCT	1 cut(s)	998
BisI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
BlsI	GCNGC	5 cut(s)	510, 970, 1315, 1834, 2211
BmcAI	AGTACT	1 cut(s)	2573
Bme1390I	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
Bme18I	GGWCC	3 cut(s)	195, 398, 2046
BmeRI	GACNNNNNGTC	1 cut(s)	172
BmgBI	CACGTC	2 cut(s)	533, 2098
BmgT120I	GGNCC	4 cut(s)	195, 398, 2046, 2723
BmiI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
BmrFI	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
BmtI	GCTAGC	1 cut(s)	2027
BplI	GAGNNNNNCTC	2 cut(s)	2012, 2044
BpmI	CTGGAG	7 cut(s)	257, 270, 651, 1388, 2277, 2518, 2663
Bpu10I	CCTNAGC	2 cut(s)	867, 1258
Bpu14I	TTCGAA	1 cut(s)	1801
BpuEI	CTTGAG	4 cut(s)	914, 1015, 1711, 2409
BsaJI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BsaWI	WCCGGW	1 cut(s)	1748
Bsc4I	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
Bse1I	ACTGG	9 cut(s)	231, 634, 1351, 1382, 1508, 1980, 2175, 2185, 2501
Bse3DI	GCAATG	1 cut(s)	63
BseBI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BseDI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BseLI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
BseMI	GCAATG	1 cut(s)	63
BseMII	CTCAG	8 cut(s)	160, 684, 693, 858, 969, 1164, 2377, 2724
BseNI	ACTGG	9 cut(s)	231, 634, 1351, 1382, 1508, 1980, 2175, 2185, 2501
BseRI	GAGGAG	1 cut(s)	160
BseSI	GKGCMC	1 cut(s)	454
BseXI	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	1 cut(s)	405
BshFI	GGCC	9 cut(s)	184, 1194, 1543, 1654, 1903, 2083, 2089, 2415, 2724
BshNI	GGYRCC	1 cut(s)	155
BsiHKAI	GWGCWC	1 cut(s)	43
BsiSI	CCGG	2 cut(s)	1456, 1749
BslFI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
BslI	CCNNNNNNNGG	5 cut(s)	191, 1869, 2108, 2111, 2255
BsmAI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BsmBI	CGTCTC	1 cut(s)	1004
BsmFI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
BsmI	GAATGC	2 cut(s)	2308, 2484
BsnI	GGCC	9 cut(s)	184, 1194, 1543, 1654, 1903, 2083, 2089, 2415, 2724
Bsp119I	TTCGAA	1 cut(s)	1801
Bsp1286I	GDGCHC	2 cut(s)	43, 454
Bsp1407I	TGTACA	1 cut(s)	496
BspACI	CCGC	2 cut(s)	54, 1772
BspANI	GGCC	9 cut(s)	184, 1194, 1543, 1654, 1903, 2083, 2089, 2415, 2724
BspCNI	CTCAG	8 cut(s)	159, 685, 692, 859, 970, 1165, 2376, 2723
BspHI	TCATGA	4 cut(s)	370, 474, 1159, 2729
BspLI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
BspMAI	CTGCAG	1 cut(s)	1394
BspOI	GCTAGC	1 cut(s)	2027
BspPI	GGATC	6 cut(s)	976, 1391, 1404, 2240, 2337, 2603
BspQI	GCTCTTC	1 cut(s)	2653
BspT104I	TTCGAA	1 cut(s)	1801
BspT107I	GGYRCC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	63
BsrGI	TGTACA	1 cut(s)	496
BsrI	ACTGG	9 cut(s)	231, 634, 1351, 1382, 1508, 1980, 2175, 2185, 2501
BssECI	CCNNGG	8 cut(s)	581, 737, 1026, 1195, 1767, 1788, 1969, 2084
BssT1I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Bst2UI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
Bst4CI	ACNGT	6 cut(s)	261, 759, 1103, 1114, 1431, 1688
Bst6I	CTCTTC	3 cut(s)	237, 2437, 2653
BstAPI	GCANNNNNTGC	2 cut(s)	1021, 1319
BstAUI	TGTACA	1 cut(s)	496
BstBI	TTCGAA	1 cut(s)	1801
BstC8I	GCNNGC	5 cut(s)	588, 1126, 1168, 1311, 2025
BstDSI	CCRYGG	1 cut(s)	737
BstENI	CCTNNNNNAGG	1 cut(s)	1867
BstMAI	GTCTC	5 cut(s)	239, 306, 474, 1004, 1597
BstMWI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
BstNI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
BstNSI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
BstSCI	CCNGG	5 cut(s)	273, 664, 1292, 1365, 1538
BstSFI	CTRYAG	3 cut(s)	961, 1390, 2106
BstSLI	GKGCMC	1 cut(s)	454
BstV1I	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
BstX2I	RGATCY	5 cut(s)	981, 998, 1396, 2342, 2595
BstYI	RGATCY	5 cut(s)	981, 998, 1396, 2342, 2595
BsuI	GTATCC	1 cut(s)	1284
BsuRI	GGCC	9 cut(s)	184, 1194, 1543, 1654, 1903, 2083, 2089, 2415, 2724
BtgI	CCRYGG	1 cut(s)	737
BtgZI	GCGATG	1 cut(s)	2215
BtrI	CACGTC	2 cut(s)	533, 2098
BtsI	GCAGTG	1 cut(s)	2725
Cac8I	GCNNGC	5 cut(s)	588, 1126, 1168, 1311, 2025
CciI	TCATGA	4 cut(s)	370, 474, 1159, 2729
Cfr13I	GGNCC	4 cut(s)	195, 398, 2046, 2723
CseI	GACGC	2 cut(s)	1021, 1965
Csp6I	GTAC	7 cut(s)	334, 497, 733, 767, 1764, 2572, 2661
CspCI	CAANNNNNGTGG	2 cut(s)	1644, 1679
CviQI	GTAC	7 cut(s)	334, 497, 733, 767, 1764, 2572, 2661
DraI	TTTAAA	1 cut(s)	942
DriI	GACNNNNNGTC	1 cut(s)	172
EaeI	YGGCCR	3 cut(s)	1901, 2081, 2413
Eam1104I	CTCTTC	3 cut(s)	237, 2437, 2653
Eam1105I	GACNNNNNGTC	1 cut(s)	172
EarI	CTCTTC	3 cut(s)	237, 2437, 2653
EciI	GGCGGA	1 cut(s)	1787
Ecl136II	GAGCTC	1 cut(s)	41
Eco130I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Eco147I	AGGCCT	1 cut(s)	1543
Eco24I	GRGCYC	1 cut(s)	43
Eco47I	GGWCC	3 cut(s)	195, 398, 2046
Eco53kI	GAGCTC	1 cut(s)	41
Eco57I	CTGAAG	1 cut(s)	1515
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	1 cut(s)	1867
EcoRII	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
EcoT14I	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
Esp3I	CGTCTC	1 cut(s)	1004
FaqI	GGGAC	6 cut(s)	126, 208, 384, 1511, 2059, 2109
FauNDI	CATATG	1 cut(s)	2458
FblI	GTMKAC	2 cut(s)	529, 1330
Fnu4HI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
FspBI	CTAG	4 cut(s)	306, 573, 1545, 2024
GluI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	7 cut(s)	257, 270, 651, 1388, 2277, 2518, 2663
HaeIII	GGCC	9 cut(s)	184, 1194, 1543, 1654, 1903, 2083, 2089, 2415, 2724
HapII	CCGG	2 cut(s)	1456, 1749
HgaI	GACGC	2 cut(s)	1021, 1965
HincII	GTYRAC	2 cut(s)	1684, 2604
HindII	GTYRAC	2 cut(s)	1684, 2604
HindIII	AAGCTT	1 cut(s)	1164
HpaI	GTTAAC	1 cut(s)	2604
HpaII	CCGG	2 cut(s)	1456, 1749
HphI	GGTGA	3 cut(s)	12, 1277, 1777
Hpy166II	GTNNAC	7 cut(s)	460, 530, 699, 1331, 1387, 1684, 2604
Hpy8I	GTNNAC	7 cut(s)	460, 530, 699, 1331, 1387, 1684, 2604
Hpy99I	CGWCG	1 cut(s)	2694
HpyAV	CCTTC	7 cut(s)	359, 794, 1539, 1670, 1915, 2318, 2423
HpyCH4III	ACNGT	6 cut(s)	261, 759, 1103, 1114, 1431, 1688
HpyCH4IV	ACGT	7 cut(s)	532, 1037, 1327, 1762, 1897, 1951, 2097
HpyF10VI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
HpySE526I	ACGT	7 cut(s)	532, 1037, 1327, 1762, 1897, 1951, 2097
KspAI	GTTAAC	1 cut(s)	2604
LguI	GCTCTTC	1 cut(s)	2653
LmnI	GCTCC	8 cut(s)	38, 46, 119, 289, 1335, 1458, 1859, 2226
Lsp1109I	GCAGC	5 cut(s)	495, 955, 1325, 1819, 2221
MaeI	CTAG	4 cut(s)	306, 573, 1545, 2024
MaeII	ACGT	7 cut(s)	532, 1037, 1327, 1762, 1897, 1951, 2097
MaeIII	GTNAC	5 cut(s)	835, 950, 1132, 1471, 1928
MfeI	CAATTG	1 cut(s)	2250
MflI	RGATCY	5 cut(s)	981, 998, 1396, 2342, 2595
MhlI	GDGCHC	2 cut(s)	43, 454
MlsI	TGGCCA	2 cut(s)	1903, 2415
MluNI	TGGCCA	2 cut(s)	1903, 2415
MlyI	GAGTC	5 cut(s)	148, 161, 694, 1849, 2131
MmeI	TCCRAC	5 cut(s)	68, 84, 1078, 1672, 1972
Mox20I	TGGCCA	2 cut(s)	1903, 2415
MroXI	GAANNNNTTC	1 cut(s)	1797
MscI	TGGCCA	2 cut(s)	1903, 2415
MseI	TTAA	8 cut(s)	443, 941, 1187, 1436, 1487, 1893, 2603, 2667
MslI	CAYNNNNRTG	5 cut(s)	608, 1036, 1083, 2158, 2404
Msp20I	TGGCCA	2 cut(s)	1903, 2415
MspA1I	CMGCKG	1 cut(s)	1316
MspI	CCGG	2 cut(s)	1456, 1749
MspR9I	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
MunI	CAATTG	1 cut(s)	2250
Mva1269I	GAATGC	2 cut(s)	2308, 2484
MvaI	CCWGG	5 cut(s)	275, 666, 1294, 1367, 1540
MwoI	GCNNNNNNNGC	6 cut(s)	896, 1021, 1319, 1778, 1982, 2196
NdeI	CATATG	1 cut(s)	2458
NheI	GCTAGC	1 cut(s)	2023
NlaIV	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
NmeAIII	GCCGAG	1 cut(s)	1653
NmuCI	GTSAC	4 cut(s)	950, 1132, 1471, 1928
NspI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
NspV	TTCGAA	1 cut(s)	1801
OliI	CACNNNNGTG	1 cut(s)	1036
PaeI	GCATGC	1 cut(s)	1313
PagI	TCATGA	4 cut(s)	370, 474, 1159, 2729
PceI	AGGCCT	1 cut(s)	1543
PciI	ACATGT	1 cut(s)	2606
PciSI	GCTCTTC	1 cut(s)	2653
PcsI	WCGNNNNNNNCGW	1 cut(s)	2650
PctI	GAATGC	2 cut(s)	2308, 2484
PdmI	GAANNNNTTC	1 cut(s)	1797
PfeI	GAWTC	6 cut(s)	50, 409, 569, 638, 1961, 2585
PflMI	CCANNNNNTGG	1 cut(s)	2255
PfoI	TCCNGGA	2 cut(s)	273, 1365
PkrI	GCNGC	5 cut(s)	510, 970, 1315, 1834, 2211
PleI	GAGTC	5 cut(s)	147, 161, 694, 1848, 2130
PpsI	GAGTC	5 cut(s)	147, 161, 694, 1848, 2130
PscI	ACATGT	1 cut(s)	2606
Psp124BI	GAGCTC	1 cut(s)	43
Psp1406I	AACGTT	1 cut(s)	1897
Psp6I	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	5 cut(s)	273, 664, 1292, 1365, 1538
PspN4I	GGNNCC	6 cut(s)	157, 196, 400, 690, 1398, 2047
PspPI	GGNCC	4 cut(s)	195, 398, 2046, 2723
PsrI	GAACNNNNNNTAC	2 cut(s)	2155, 2187
PstI	CTGCAG	1 cut(s)	1394
PsuI	RGATCY	5 cut(s)	981, 998, 1396, 2342, 2595
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	7 cut(s)	335, 498, 734, 768, 1765, 2573, 2662
RsaNI	GTAC	7 cut(s)	334, 497, 733, 767, 1764, 2572, 2661
RseI	CAYNNNNRTG	5 cut(s)	608, 1036, 1083, 2158, 2404
SacI	GAGCTC	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	2653
SaqAI	TTAA	8 cut(s)	443, 941, 1187, 1436, 1487, 1893, 2603, 2667
SatI	GCNGC	5 cut(s)	509, 969, 1314, 1833, 2210
Sau96I	GGNCC	4 cut(s)	195, 398, 2046, 2723
ScaI	AGTACT	1 cut(s)	2573
SchI	GAGTC	5 cut(s)	148, 161, 694, 1849, 2131
ScrFI	CCNGG	5 cut(s)	275, 666, 1294, 1367, 1540
SduI	GDGCHC	2 cut(s)	43, 454
SfcI	CTRYAG	3 cut(s)	961, 1390, 2106
SfuI	TTCGAA	1 cut(s)	1801
SinI	GGWCC	3 cut(s)	195, 398, 2046
SmiMI	CAYNNNNRTG	5 cut(s)	608, 1036, 1083, 2158, 2404
SmlI	CTYRAG	4 cut(s)	893, 994, 1726, 2424
SmoI	CTYRAG	4 cut(s)	893, 994, 1726, 2424
SphI	GCATGC	1 cut(s)	1313
SseBI	AGGCCT	1 cut(s)	1543
SsiI	CCGC	2 cut(s)	54, 1772
SspI	AATATT	2 cut(s)	1599, 1808
SspMI	CTAG	4 cut(s)	306, 573, 1545, 2024
SstI	GAGCTC	1 cut(s)	43
StuI	AGGCCT	1 cut(s)	1543
StyD4I	CCNGG	5 cut(s)	273, 664, 1292, 1365, 1538
StyI	CCWWGG	7 cut(s)	581, 1026, 1195, 1767, 1788, 1969, 2084
TaaI	ACNGT	6 cut(s)	261, 759, 1103, 1114, 1431, 1688
TaiI	ACGT	7 cut(s)	535, 1040, 1330, 1765, 1900, 1954, 2100
TaqI	TCGA	6 cut(s)	712, 1801, 1909, 2392, 2440, 2476
TatI	WGTACW	3 cut(s)	496, 2571, 2660
TfiI	GAWTC	6 cut(s)	50, 409, 569, 638, 1961, 2585
Tru1I	TTAA	8 cut(s)	443, 941, 1187, 1436, 1487, 1893, 2603, 2667
Tru9I	TTAA	8 cut(s)	443, 941, 1187, 1436, 1487, 1893, 2603, 2667
TseFI	GTSAC	4 cut(s)	950, 1132, 1471, 1928
TseI	GCWGC	5 cut(s)	508, 968, 1313, 1832, 2209
Tsp45I	GTSAC	4 cut(s)	950, 1132, 1471, 1928
TspGWI	ACGGA	1 cut(s)	1348
Van91I	CCANNNNNTGG	1 cut(s)	2255
VpaK11BI	GGWCC	3 cut(s)	195, 398, 2046
XagI	CCTNNNNNAGG	1 cut(s)	1867
XapI	RAATTY	3 cut(s)	205, 922, 2035
XceI	RCATGY	4 cut(s)	298, 1008, 1313, 2610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1202
XmiI	GTMKAC	2 cut(s)	529, 1330
XmnI	GAANNNNTTC	1 cut(s)	1797
XspI	CTAG	4 cut(s)	306, 573, 1545, 2024
ZrmI	AGTACT	1 cut(s)	2573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.