Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003038

Physical Location & Seq

Genomic Coordinates Forward (+)

32674870 .. 32680233

Gene Structure 5364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG309400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

ATGGAAGATGGTGTTTCATCACCAGCTACCATGCTGGGAGCTCCAACTGATTCCGCAATGGATTTAGACTTCATGGATGAATTGTTCTTAGATGGATGCTGGTTGGAAACAATAGATGGAGCTGGATTTCCTAATCAGAGTCCCCTCAGTTCTGGTGCCATTTTGGACTCCTCGTTTTTCTGGCCTACTTTGGGGACCAATGGAAATTTCAGCACGAACCCATTTCAGACCAGTAATCAAGAAGAGACACATACACCACTGTTCAATGAACTCCAGGAAGAAGCTCCAGCCAACATGCAGTCTCCTAGCCAGAATATGACAGATGTTGTCAGGTACTCTGGTCAATCAGGAAATCATATTATTGAAGGTCATGATTTCAGTAGAGGTATCTGGATTGGTCCCATAGAGAATCAAGTTTCTGCACCATCTGTGATGGAGAGATTAAAGAGGGCACTTGTGTACATGAAAGATGTCATGAGAGACAAAAATGTTCTTGTACAGGTATGGCTGCCTGTAAATAGAGGGGGTAGACGTGTTTTAACAACTAATGATCTACTTTCCTCACTTGATTCTAGCTGTCCAAGGCTTGCCAAGTATCATGACATCTCTGTGAATTATCAGTTCTCAACTGGAGAAGATTCTAAGGAGTTTGTCAAGGGGTTGCCTGGTCGTGTTTTCTCAGGTAAGGTTCCTGAGTGGACTCCTGATGTTCGATTATTTAGAAGTGACGAGTACCCACGGGTTGATGATGCTCAACGGTATGATGTACGAGGAACTCTTGCCCTTCCGATCTTTGAACAAGGTAGTAGAACTTGCTTGGGTGTAATTGAGGTTGTTATGACCACCCAGAAGATGCAGTATCAACCTGAGCTTGAAAGTGTTTGCAAGGCACTCGAGGCTGTTGATCTTCGGAGTTCAAAAAATTTGAATACTCATAATTTAAAGCAGGCGAGTGACAAGCCCTACAAAGCTGCATTACCTGAGATCCGAGAGGTCTTGAGATCTGCATGTGAGACGCACAACTTGCCCTTGGCACAAACTTGGGTGTTATGCATCCAACAAGGCAAAGATGGATGCCGACATTCTGATGACAACTACGTTCACTGTGTTTCAACTGTGGATGATGCTTGCCATGTGACTTATCCTTATATCAAGGGTTTTCATGAAGCTTGCTCTGAGCATCACTTGTTAAAAGGCCAAGGCATCGTTGGGAGAGCTTTTATGACTAATCAACCATGCTTCTCAAATGATATAACTTCCTTAACCAAAACAGAGTATCCTTTATCTCACCATGCCAGGATGTTTGGATTGCATGCAGCGGTTGCAATACGTCTACGGAGCATCCACACTGGTTCAACTGATTTTGTCCTGGAGTTCTTCTTGCCAGTGGATTGCAGGGATCCTGAACAACACAAGAAGATTCTAACTTCACTGTCTTTAATCATACAAAATATCTGCCGGAGCTTACGGGTTGTCACAGACAAGGAATTAAAGGAAGAAACAGATTTGCCAGTCAGTGAAGTGATAGTCCCTTCAGATCCCAGGCCTAGTGGTATTTCCTCTTTTGCAGAGGTGCAACAGACTGATAACGATGTCTCAATATTCCCAAAGGAAAAGGCAAGGAAGATGCCGAGTGCGAAATCCTCAAAGTTGAGGCCACAAGACTTGAACAAAAAAGAAGGTGTTGACTGTGTTGGAGAGTTTTCTACATTCGGTGAGGGTAGCTTCTCAAGTGTTGGTGCGAGTAAGACCGGAGAGAAAAGGCGTACCAAGGCGGAGAAAGCTATCACCTTGGAAGTTCTTCGAAAATATTTTTCTGGCAGCCTGAAAGATGCTGCAAAGAGTCTTGGAGTTTGCTCCACAACCTTGAAAAGGATATGCCGACAACATGGGATTAAACGTTGGCCATCTCGAAAAATCAAGAAGGTTGGACACTCCTTAGAGAAACTCCAACGTGTAATTGATTCAGTCCAAGGTGCGTCCAGTGCTTTCCAAATCAATTCTTTCTATACAAGCTATCCAGAGTTAGCCTCTCCAAATTTGTCTGGGACCAGCCCATTTTTAACTTCAAAGCTGATTGATCGGCCAAGGCCATCAGACGTGCCACCTGAAGGTGGTGTTTTGAGTCCCCAAGCTACTGCATCAAAATCTCCCTCGTCCTCATGTAGTCAGTGTTCCAGTTCAAGCCAGTGCTGTTCCAGCAAGACAGAGCAGCATCTTCCCACATGGAGCATCGCAGATAATGACGATCCAATTGCTGGAGATAATAGAGTGCTGAAGAGGGTCAGAAGTGAAGCAGAGTTGAATGCCCTTCGTCAAGGTGGAGTGGATGAGCTAATGCAAAGATCCCAGAGCCATAAATATCTCAGTGAGCAACAAAACTTGCAGTCTTTTCGACCTCCACTGAAATATGATGGCCAGATAGCTGAAGAAGGGGATGCTCGAAGAGTAAAAGTCGCATATGGGGATGAGAAAACTCGATTTCGCATTCAAAATAACTGGAGATATGAAGATTTGGGGCAGGAAATTGCAAAGCGATTTGGTATAGAGGACATGAGTAGATTTGATATGAAGTACTTGGACGATGATTCAGAGTGGATCTTGTTAACATGTGATGCAGATTTAGATGAGTGCCTTGATGTATGTCGCTCTTCACGATGCAGTACAATTAAGCTCTCCCTCCAGCTTTCTCGTCGTCATTTAGAAAGGTTCTCAGGTAGCAGTGGCCCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

911

Amino Acids

101.66

Weight (kDa)

6.3

Isoelectric Point (pI)

54.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	317 - 490	2.8e-83	NLP protein GAF domain
RWP-RK	PF02042	596 - 643	1.4e-23	RWP-RK domain
PB1	PF00564	815 - 895	1.4e-19	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20640 AT1G20640 AT1G20640 AT1G76350 AT1G76350 AT1G76350 AT1G76350
fragaria_vesca	FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270
malus_domestica	MD06G1009200.v1.1 MD16G1285500.v1.1
prunus_persica	Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1
pyrus_communis	pycom06g00770 pycom16g25880
rosa_chinensis	RchiOBHm_Chr7g0215411
rosa_laevigata	RLG00000002660 RLG00000002663
rosa_multiflora	Rmu_co8448299.1_g000001 Rmu_sc0000355.1_g000001 Rmu_sc0005928.1_g000011
rosa_roxburghii	Rroxscaffold_3G00244210
rosa_rugosa	Rorug07G0153300 Rorug07G0153400
rosa_samantha	Rh7AG289800 Rh7BG281700 Rh7CG309400 Rh7DG293400
rosa_wichuraiana	Rw7G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	155
AccB7I	CCANNNNNTGG	1 cut(s)	2258
AccI	GTMKAC	2 cut(s)	529, 1333
AciI	CCGC	3 cut(s)	54, 1319, 1775
AclI	AACGTT	1 cut(s)	1900
AclWI	GGATC	7 cut(s)	979, 1394, 1407, 1532, 2243, 2340, 2606
AcoI	YGGCCR	3 cut(s)	1904, 2084, 2416
AcsI	RAATTY	3 cut(s)	205, 922, 2038
AcuI	CTGAAG	4 cut(s)	1518, 2130, 2297, 2448
AfaI	GTAC	8 cut(s)	335, 461, 498, 734, 768, 1768, 2576, 2665
AfiI	CCNNNNNNNGG	5 cut(s)	191, 1872, 2111, 2114, 2258
AflIII	ACRYGT	3 cut(s)	532, 1954, 2609
AjiI	CACGTC	2 cut(s)	533, 2101
AjnI	CCWGG	5 cut(s)	273, 664, 1295, 1368, 1541
AjuI	GAANNNNNNNTTGG	2 cut(s)	191, 223
AloI	GAACNNNNNNTCC	2 cut(s)	68, 100
Alw21I	GWGCWC	1 cut(s)	43
Alw26I	GTCTC	5 cut(s)	239, 306, 474, 1007, 1600
AlwI	GGATC	7 cut(s)	979, 1394, 1407, 1532, 2243, 2340, 2606
Ama87I	CYCGRG	1 cut(s)	893
AoxI	GGCC	9 cut(s)	182, 1195, 1544, 1655, 1904, 2084, 2090, 2416, 2725
ApeKI	GCWGC	6 cut(s)	508, 971, 1316, 1821, 1835, 2212
ApoI	RAATTY	3 cut(s)	205, 922, 2038
Asp700I	GAANNNNTTC	1 cut(s)	1800
AspS9I	GGNCC	4 cut(s)	195, 398, 2049, 2726
AsuHPI	GGTGA	4 cut(s)	12, 1280, 1727, 1780
AsuII	TTCGAA	1 cut(s)	1804
AvaI	CYCGRG	1 cut(s)	893
AvaII	GGWCC	3 cut(s)	195, 398, 2049
BaeGI	GKGCMC	1 cut(s)	454
BaeI	ACNNNNGTAYC	2 cut(s)	325, 358
BalI	TGGCCA	2 cut(s)	1906, 2418
BamHI	GGATCC	1 cut(s)	1399
BanI	GGYRCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	43
Bbv12I	GWGCWC	1 cut(s)	43
BbvI	GCAGC	6 cut(s)	495, 958, 1328, 1822, 1833, 2224
BccI	CCATC	9 cut(s)	2, 86, 110, 427, 433, 1064, 1915, 2101, 2408
BcgI	CGANNNNNNTGC	6 cut(s)	874, 908, 2237, 2271, 2375, 2409
BciT130I	CCWGG	5 cut(s)	275, 666, 1297, 1370, 1543
BciVI	GTATCC	1 cut(s)	1287
BcoDI	GTCTC	5 cut(s)	239, 306, 474, 1007, 1600
BfaI	CTAG	3 cut(s)	306, 573, 1548
BfuI	GTATCC	1 cut(s)	1287
BglII	AGATCT	1 cut(s)	1001
BisI	GCNGC	6 cut(s)	509, 972, 1317, 1822, 1836, 2213
BlsI	GCNGC	6 cut(s)	510, 973, 1318, 1823, 1837, 2214
BmcAI	AGTACT	1 cut(s)	2576
Bme1390I	CCNGG	5 cut(s)	275, 666, 1297, 1370, 1543
Bme18I	GGWCC	3 cut(s)	195, 398, 2049
BmeT110I	CYCGRG	1 cut(s)	893
BmgBI	CACGTC	2 cut(s)	533, 2101
BmgT120I	GGNCC	4 cut(s)	195, 398, 2049, 2726
BmiI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1401, 2050
BmrFI	CCNGG	5 cut(s)	275, 666, 1297, 1370, 1543
BplI	GAGNNNNNCTC	2 cut(s)	2015, 2047
BpmI	CTGGAG	7 cut(s)	257, 270, 651, 1391, 2280, 2521, 2666
Bpu10I	CCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	1804
BpuEI	CTTGAG	2 cut(s)	1018, 1714
BsaJI	CCNNGG	9 cut(s)	581, 737, 1029, 1198, 1541, 1770, 1791, 1972, 2087
BsaWI	WCCGGW	1 cut(s)	1751
Bsc4I	CCNNNNNNNGG	5 cut(s)	191, 1872, 2111, 2114, 2258
Bse1I	ACTGG	9 cut(s)	231, 634, 1354, 1385, 1511, 1983, 2178, 2188, 2504
Bse3DI	GCAATG	1 cut(s)	63
BseBI	CCWGG	5 cut(s)	275, 666, 1297, 1370, 1543
BseDI	CCNNGG	9 cut(s)	581, 737, 1029, 1198, 1541, 1770, 1791, 1972, 2087
BseLI	CCNNNNNNNGG	5 cut(s)	191, 1872, 2111, 2114, 2258
BseMI	GCAATG	1 cut(s)	63
BseMII	CTCAG	8 cut(s)	160, 684, 693, 858, 972, 1167, 2380, 2727
BseNI	ACTGG	9 cut(s)	231, 634, 1354, 1385, 1511, 1983, 2178, 2188, 2504
BseRI	GAGGAG	1 cut(s)	160
BseSI	GKGCMC	1 cut(s)	454
BseXI	GCAGC	6 cut(s)	495, 958, 1328, 1822, 1833, 2224
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	1 cut(s)	405
BshFI	GGCC	9 cut(s)	184, 1197, 1546, 1657, 1906, 2086, 2092, 2418, 2727
BshNI	GGYRCC	1 cut(s)	155
BsiHKAI	GWGCWC	1 cut(s)	43
BsiHKCI	CYCGRG	1 cut(s)	893
BsiSI	CCGG	2 cut(s)	1459, 1752
BslFI	GGGAC	6 cut(s)	126, 208, 384, 1514, 2062, 2112
BslI	CCNNNNNNNGG	5 cut(s)	191, 1872, 2111, 2114, 2258
BsmAI	GTCTC	5 cut(s)	239, 306, 474, 1007, 1600
BsmBI	CGTCTC	1 cut(s)	1007
BsmFI	GGGAC	6 cut(s)	126, 208, 384, 1514, 2062, 2112
BsmI	GAATGC	2 cut(s)	2311, 2487
BsnI	GGCC	9 cut(s)	184, 1197, 1546, 1657, 1906, 2086, 2092, 2418, 2727
BsoBI	CYCGRG	1 cut(s)	893
Bsp119I	TTCGAA	1 cut(s)	1804
Bsp1286I	GDGCHC	2 cut(s)	43, 454
Bsp1407I	TGTACA	2 cut(s)	459, 496
BspACI	CCGC	3 cut(s)	54, 1319, 1775
BspANI	GGCC	9 cut(s)	184, 1197, 1546, 1657, 1906, 2086, 2092, 2418, 2727
BspCNI	CTCAG	8 cut(s)	159, 685, 692, 859, 973, 1168, 2379, 2726
BspHI	TCATGA	5 cut(s)	370, 474, 598, 1162, 2732
BspLI	GGNNCC	6 cut(s)	157, 196, 400, 690, 1401, 2050
BspPI	GGATC	7 cut(s)	979, 1394, 1407, 1532, 2243, 2340, 2606
BspQI	GCTCTTC	1 cut(s)	2656
BspT104I	TTCGAA	1 cut(s)	1804
BspT107I	GGYRCC	1 cut(s)	155
BsrDI	GCAATG	1 cut(s)	63
BsrGI	TGTACA	2 cut(s)	459, 496
BsrI	ACTGG	9 cut(s)	231, 634, 1354, 1385, 1511, 1983, 2178, 2188, 2504
BssECI	CCNNGG	9 cut(s)	581, 737, 1029, 1198, 1541, 1770, 1791, 1972, 2087
BssT1I	CCWWGG	7 cut(s)	581, 1029, 1198, 1770, 1791, 1972, 2087
Bst2UI	CCWGG	5 cut(s)	275, 666, 1297, 1370, 1543
Bst4CI	ACNGT	6 cut(s)	261, 759, 1106, 1117, 1434, 1691
Bst6I	CTCTTC	4 cut(s)	237, 2273, 2440, 2656
BstAPI	GCANNNNNTGC	2 cut(s)	1024, 1322
BstAUI	TGTACA	2 cut(s)	459, 496
BstBI	TTCGAA	1 cut(s)	1804
BstC8I	GCNNGC	5 cut(s)	588, 948, 1129, 1171, 1314
BstDSI	CCRYGG	1 cut(s)	737
BstENI	CCTNNNNNAGG	1 cut(s)	1870
BstMAI	GTCTC	5 cut(s)	239, 306, 474, 1007, 1600
BstMWI	GCNNNNNNNGC	6 cut(s)	896, 1024, 1322, 1781, 1985, 2199
BstNI	CCWGG	5 cut(s)	275, 666, 1297, 1370, 1543
BstNSI	RCATGY	4 cut(s)	298, 1011, 1316, 2613
BstSCI	CCNGG	5 cut(s)	273, 664, 1295, 1368, 1541
BstSLI	GKGCMC	1 cut(s)	454
BstV1I	GCAGC	6 cut(s)	495, 958, 1328, 1822, 1833, 2224
BstX2I	RGATCY	6 cut(s)	984, 1001, 1399, 1537, 2345, 2598
BstYI	RGATCY	6 cut(s)	984, 1001, 1399, 1537, 2345, 2598
BsuI	GTATCC	1 cut(s)	1287
BsuRI	GGCC	9 cut(s)	184, 1197, 1546, 1657, 1906, 2086, 2092, 2418, 2727
BtgI	CCRYGG	1 cut(s)	737
BtgZI	GCGATG	1 cut(s)	2218
BtrI	CACGTC	2 cut(s)	533, 2101
BtsI	GCAGTG	1 cut(s)	2728
Cac8I	GCNNGC	5 cut(s)	588, 948, 1129, 1171, 1314
CciI	TCATGA	5 cut(s)	370, 474, 598, 1162, 2732
Cfr13I	GGNCC	4 cut(s)	195, 398, 2049, 2726
CseI	GACGC	2 cut(s)	1024, 1968
Csp6I	GTAC	8 cut(s)	334, 460, 497, 733, 767, 1767, 2575, 2664
CspCI	CAANNNNNGTGG	2 cut(s)	1647, 1682
CviQI	GTAC	8 cut(s)	334, 460, 497, 733, 767, 1767, 2575, 2664
DraI	TTTAAA	1 cut(s)	942
EaeI	YGGCCR	3 cut(s)	1904, 2084, 2416
Eam1104I	CTCTTC	4 cut(s)	237, 2273, 2440, 2656
EarI	CTCTTC	4 cut(s)	237, 2273, 2440, 2656
EciI	GGCGGA	1 cut(s)	1790
Ecl136II	GAGCTC	1 cut(s)	41
Eco130I	CCWWGG	7 cut(s)	581, 1029, 1198, 1770, 1791, 1972, 2087
Eco147I	AGGCCT	1 cut(s)	1546
Eco24I	GRGCYC	1 cut(s)	43
Eco47I	GGWCC	3 cut(s)	195, 398, 2049
Eco53kI	GAGCTC	1 cut(s)	41
Eco57I	CTGAAG	4 cut(s)	1518, 2130, 2297, 2448
Eco88I	CYCGRG	1 cut(s)	893
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	1 cut(s)	1870
EcoRII	CCWGG	5 cut(s)	273, 664, 1295, 1368, 1541
EcoT14I	CCWWGG	7 cut(s)	581, 1029, 1198, 1770, 1791, 1972, 2087
EcoT22I	ATGCAT	1 cut(s)	1055
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	7 cut(s)	581, 1029, 1198, 1770, 1791, 1972, 2087
Esp3I	CGTCTC	1 cut(s)	1007
FaqI	GGGAC	6 cut(s)	126, 208, 384, 1514, 2062, 2112
FauNDI	CATATG	1 cut(s)	2461
FblI	GTMKAC	2 cut(s)	529, 1333
Fnu4HI	GCNGC	6 cut(s)	509, 972, 1317, 1822, 1836, 2213
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	6 cut(s)	509, 972, 1317, 1822, 1836, 2213
FspBI	CTAG	3 cut(s)	306, 573, 1548
GluI	GCNGC	6 cut(s)	509, 972, 1317, 1822, 1836, 2213
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	7 cut(s)	257, 270, 651, 1391, 2280, 2521, 2666
HaeIII	GGCC	9 cut(s)	184, 1197, 1546, 1657, 1906, 2086, 2092, 2418, 2727
HapII	CCGG	2 cut(s)	1459, 1752
HgaI	GACGC	2 cut(s)	1024, 1968
HincII	GTYRAC	2 cut(s)	1687, 2607
HindII	GTYRAC	2 cut(s)	1687, 2607
HindIII	AAGCTT	1 cut(s)	1167
HpaI	GTTAAC	1 cut(s)	2607
HpaII	CCGG	2 cut(s)	1459, 1752
HphI	GGTGA	4 cut(s)	12, 1280, 1727, 1780
Hpy166II	GTNNAC	7 cut(s)	460, 530, 699, 1102, 1334, 1687, 2607
Hpy8I	GTNNAC	7 cut(s)	460, 530, 699, 1102, 1334, 1687, 2607
Hpy99I	CGWCG	1 cut(s)	2697
HpyAV	CCTTC	8 cut(s)	359, 794, 1542, 1673, 1918, 2105, 2321, 2426
HpyCH4III	ACNGT	6 cut(s)	261, 759, 1106, 1117, 1434, 1691
HpyCH4IV	ACGT	6 cut(s)	532, 1098, 1330, 1900, 1954, 2100
HpyF10VI	GCNNNNNNNGC	6 cut(s)	896, 1024, 1322, 1781, 1985, 2199
HpySE526I	ACGT	6 cut(s)	532, 1098, 1330, 1900, 1954, 2100
KspAI	GTTAAC	1 cut(s)	2607
LguI	GCTCTTC	1 cut(s)	2656
LmnI	GCTCC	8 cut(s)	38, 46, 119, 289, 1338, 1461, 1862, 2229
Lsp1109I	GCAGC	6 cut(s)	495, 958, 1328, 1822, 1833, 2224
MaeI	CTAG	3 cut(s)	306, 573, 1548
MaeII	ACGT	6 cut(s)	532, 1098, 1330, 1900, 1954, 2100
MaeIII	GTNAC	4 cut(s)	725, 953, 1135, 1474
MfeI	CAATTG	1 cut(s)	2253
MflI	RGATCY	6 cut(s)	984, 1001, 1399, 1537, 2345, 2598
MhlI	GDGCHC	2 cut(s)	43, 454
MlsI	TGGCCA	2 cut(s)	1906, 2418
MluNI	TGGCCA	2 cut(s)	1906, 2418
MlyI	GAGTC	5 cut(s)	148, 161, 694, 1852, 2134
MmeI	TCCRAC	6 cut(s)	68, 84, 1081, 1675, 1909, 1975
Mox20I	TGGCCA	2 cut(s)	1906, 2418
Mph1103I	ATGCAT	1 cut(s)	1055
MroXI	GAANNNNTTC	1 cut(s)	1800
MscI	TGGCCA	2 cut(s)	1906, 2418
MslI	CAYNNNNRTG	2 cut(s)	608, 1086
Msp20I	TGGCCA	2 cut(s)	1906, 2418
MspA1I	CMGCKG	1 cut(s)	1319
MspI	CCGG	2 cut(s)	1459, 1752
MspR9I	CCNGG	5 cut(s)	275, 666, 1297, 1370, 1543
MunI	CAATTG	1 cut(s)	2253
Mva1269I	GAATGC	2 cut(s)	2311, 2487
MvaI	CCWGG	5 cut(s)	275, 666, 1297, 1370, 1543
MwoI	GCNNNNNNNGC	6 cut(s)	896, 1024, 1322, 1781, 1985, 2199
NdeI	CATATG	1 cut(s)	2461
NlaIV	GGNNCC	6 cut(s)	157, 196, 400, 690, 1401, 2050
NmeAIII	GCCGAG	1 cut(s)	1656
NmuCI	GTSAC	4 cut(s)	725, 953, 1135, 1474
NsiI	ATGCAT	1 cut(s)	1055
NspI	RCATGY	4 cut(s)	298, 1011, 1316, 2613
NspV	TTCGAA	1 cut(s)	1804
PaeI	GCATGC	1 cut(s)	1316
PaeR7I	CTCGAG	1 cut(s)	893
PagI	TCATGA	5 cut(s)	370, 474, 598, 1162, 2732
PceI	AGGCCT	1 cut(s)	1546
PciI	ACATGT	1 cut(s)	2609
PciSI	GCTCTTC	1 cut(s)	2656
PcsI	WCGNNNNNNNCGW	1 cut(s)	2653
PctI	GAATGC	2 cut(s)	2311, 2487
PdmI	GAANNNNTTC	1 cut(s)	1800
PfeI	GAWTC	7 cut(s)	50, 409, 569, 638, 1420, 1964, 2588
PflMI	CCANNNNNTGG	1 cut(s)	2258
PfoI	TCCNGGA	2 cut(s)	273, 1368
PkrI	GCNGC	6 cut(s)	510, 973, 1318, 1823, 1837, 2214
PleI	GAGTC	5 cut(s)	147, 161, 694, 1851, 2133
PpsI	GAGTC	5 cut(s)	147, 161, 694, 1851, 2133
PscI	ACATGT	1 cut(s)	2609
Psp124BI	GAGCTC	1 cut(s)	43
Psp1406I	AACGTT	1 cut(s)	1900
Psp6I	CCWGG	5 cut(s)	273, 664, 1295, 1368, 1541
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	5 cut(s)	273, 664, 1295, 1368, 1541
PspN4I	GGNNCC	6 cut(s)	157, 196, 400, 690, 1401, 2050
PspPI	GGNCC	4 cut(s)	195, 398, 2049, 2726
PspXI	VCTCGAGB	1 cut(s)	893
PsrI	GAACNNNNNNTAC	2 cut(s)	2158, 2190
PsuI	RGATCY	6 cut(s)	984, 1001, 1399, 1537, 2345, 2598
RsaI	GTAC	8 cut(s)	335, 461, 498, 734, 768, 1768, 2576, 2665
RsaNI	GTAC	8 cut(s)	334, 460, 497, 733, 767, 1767, 2575, 2664
RseI	CAYNNNNRTG	2 cut(s)	608, 1086
SacI	GAGCTC	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	2656
SatI	GCNGC	6 cut(s)	509, 972, 1317, 1822, 1836, 2213
Sau96I	GGNCC	4 cut(s)	195, 398, 2049, 2726
ScaI	AGTACT	1 cut(s)	2576
SchI	GAGTC	5 cut(s)	148, 161, 694, 1852, 2134
ScrFI	CCNGG	5 cut(s)	275, 666, 1297, 1370, 1543
SduI	GDGCHC	2 cut(s)	43, 454
Sfr274I	CTCGAG	1 cut(s)	893
SfuI	TTCGAA	1 cut(s)	1804
SinI	GGWCC	3 cut(s)	195, 398, 2049
SlaI	CTCGAG	1 cut(s)	893
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1086
SmlI	CTYRAG	3 cut(s)	893, 997, 1729
SmoI	CTYRAG	3 cut(s)	893, 997, 1729
SphI	GCATGC	1 cut(s)	1316
SseBI	AGGCCT	1 cut(s)	1546
SsiI	CCGC	3 cut(s)	54, 1319, 1775
SspI	AATATT	2 cut(s)	1602, 1811
SspMI	CTAG	3 cut(s)	306, 573, 1548
SstI	GAGCTC	1 cut(s)	43
StuI	AGGCCT	1 cut(s)	1546
StyD4I	CCNGG	5 cut(s)	273, 664, 1295, 1368, 1541
StyI	CCWWGG	7 cut(s)	581, 1029, 1198, 1770, 1791, 1972, 2087
TaaI	ACNGT	6 cut(s)	261, 759, 1106, 1117, 1434, 1691
TaiI	ACGT	6 cut(s)	535, 1101, 1333, 1903, 1957, 2103
TaqI	TCGA	7 cut(s)	712, 894, 1804, 1912, 2395, 2443, 2479
TatI	WGTACW	4 cut(s)	459, 496, 2574, 2663
TfiI	GAWTC	7 cut(s)	50, 409, 569, 638, 1420, 1964, 2588
TseFI	GTSAC	4 cut(s)	725, 953, 1135, 1474
TseI	GCWGC	6 cut(s)	508, 971, 1316, 1821, 1835, 2212
Tsp45I	GTSAC	4 cut(s)	725, 953, 1135, 1474
TspGWI	ACGGA	1 cut(s)	1351
Van91I	CCANNNNNTGG	1 cut(s)	2258
VpaK11BI	GGWCC	3 cut(s)	195, 398, 2049
XagI	CCTNNNNNAGG	1 cut(s)	1870
XapI	RAATTY	3 cut(s)	205, 922, 2038
XceI	RCATGY	4 cut(s)	298, 1011, 1316, 2613
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1205
XhoI	CTCGAG	1 cut(s)	893
XmiI	GTMKAC	2 cut(s)	529, 1333
XmnI	GAANNNNTTC	1 cut(s)	1800
XspI	CTAG	3 cut(s)	306, 573, 1548
ZrmI	AGTACT	1 cut(s)	2576
Zsp2I	ATGCAT	1 cut(s)	1055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.