Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003038

Physical Location & Seq

Genomic Coordinates Forward (+)

28077862 .. 28081790

Gene Structure 3929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g25880.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGGATGATGGTGTTCTGTCACCAGCTACCATGCTGGGAGCTCAACCTGATTCCGCTATGGATTTGGATTTCATGGATGAACTCTTCTTAGAGGGATGCTGGTTGGAAGCAAGAGATGGACCTGAGTTTCCTAATCAGAACCCCTCCTTTATTTGGCATACGTTGGAGACCAATGGCAATATGTCCATGAACCCGTCTCAAAACAGTAATCAAGAGGAGATGCAAACCCCATTCTTTAAACAACTTGAGGAAGGTCCTGTGAATCCTCAGTCTCCTTGCCAGAATATGATAGAAGATGTTGTGGCGTACTCTGGTCAATCAGAGGATCCTACAATAGGTCGTGAATTGAGCACAAGGTGGTGGATTGGTCCCACTGGAAATGATGGGTCTGCATCATCTGTGACGCAGAGATTAATGACGGCACTCACGTACATCAGAGAGGTCATGAGAAACAAAGATGTCCTAGTACAAGTATGGGTGCCAGTGAATAGAGGGGGTAGAGATGTTTTAACAACGAATGAACTTTTCTGTCTTGATCCTAGCTGTTCCAGGCTTGCTAAATATCGAGATATCTCTGTTAATTACCAGTTCTCAACTGGGGAGGATTCAACAGAGATGGTCAAGGGGTTGCCTGGCCGGGTTTTCTCGGGGAAGGTTCCTGAGTGGACTCCTGATGCTCGATACTTTACAAGTGATGAATATCCACGGGTTGGCCATGCTCAACAGTATGATGTAAGTGGAACTCTAGCCCTTCCAATCTTTGAACAAGGTAGTAGGACTTGCTTGGGTGTTATTGAGGTTGTTACGACCGACCAGAAGATAAGGTATCAACCTGACATTGATGGCATTTGCAAGGCACTTGAGGCTGTTGATCTTCGAAGTTCTAGAAATTTGAGTACTGAAAATGTAAAGGGGTGTGACAAGCCCTATCACGCTGCGTTACCCGAGATCCAAGAGATCTTGAGATCTGCATGTGAGACGCACAAATTGCCCTTGGCACAAACCTGGGTGTCATGCATCGAACAGGGTAAAGATGGGTGTCGACATTCTGATGACAACTACATCCACTGTGTTTCAACTGTGGATCATGCTTGTCATGTGGCTGATCCTTATATCCAGGGTTTTCATGAAGCGTGTTCTGAGCATCACTTGCTAAGAGGCCAAGGCATCGTTGGAAGAGCTTTTATGACCAATCAGCCATGCTTCTCAGATGACATGACTTCCTTTTTCAAGACAGAGTATCCTCTATCTCACCATGCCAGGATGTTCAACTTGCATGCAGCTGTTGCAATACGTCTACGGAGCACCGACACTGGTTCAACTGATTTTGTCCTGGAGTTCTTCTTGCCATTGGAGTGCAGGGATCCTAAAGAACAGAAAAAGATGCTTAATTCACTGTCCTTGATTATACAACAGACATGCCGGAGCTTACGGGTTGTCACAGACAAGGAAGTTGAGGAGGAAACTAAATTTCATGTCAGTGAGGTGATAGTCCCGTCAGATCCTGGACCAAGTAATGTTGCCTGTTTCACAGAGGTCCAACAGAATGGTAATGCTGTCTCAATGTTCCCAAACAAAAAACAACGCAAGGTGCTGAGTGTGAAATTGTCGAAATTAAGGCAGAATCAAGAAGATTCAAACCTAAAAAGTGTTAAGTGTGGAGAAGAGTTTTCTGTTTTGGGTGAGGGTGAGGGTAGCTTTTCAACTGTTGGTGCGAGTAAGACAAGAGAGAAAAGACGTGCCAAGGCAGAAAAAGATATCAACTTGCAAGTTCTTCGAAAATATTTTTCTGGTAGTCTGAAAGATGCTGCAAAGAGTATTGGAGTTTGCTCAACAACCTTGAAAAGGATATGCAGACAACATGGGATTAAACGTTGGCCATCTCGAAAACTAAAGAAGGTTGGTCACTCTTTACAGAAACTCCAACTTGTAATCGACTCAGTTGAAGGTGCATCTGGTGCTTTCCAAATCAACTCTTTCTATACGAACTTCCCAGAGCTAACGTCTCCAAATTTATCGGGGACCAGCCCATTTTCAAATTCAAAGCTGAGTGACCAACCAAACCAGACAAACTTGTCACCTGAAGGTGGTGTTTTTAGCCCCCAAGCTACCGCATCAAAATCTCCCCCATCTTCATGCAGTCAGAATTCCAGTTCAAGCCAATGCTGTTCCAGTAAGACACAGCAACATCCCTTCTCATGTAATGTTGCTGGTAATGATGATCCAGTTGGAGATAACTCAAGAGATGGTGTGCTAAAGAGGGTTAGAAGTGAGGCAGGATTGCATGATTTTGGCCAAGATCGAACGGAGCTACTGCCAAGATCCCAGAGCCAGAAAATTCTCTGTGAGCAACAAAATCTGCAGTCGATTCCACCTTCACTGAAAAATAATGGCCGGGTAACTCAAGTAGAGGTTCAAAGAGTAAAAGTTGCATATGCGGATGAGAAAACCCGGTTCCGCATGCAAAGTAATTGGAGATATGAAGATTTGGTGCAAGAAATCGCAAAGCGATTTAGCATACAAGACATGAGTAATTTCGATATAAAATACTTGGATGATGACTCAGAATGGGTGTTGTTAACATGTGATGATGATTTAGAGGAGTGTGTGGATGTATGCCGATCTTCACAGAGCCACACAATTAAGCTCTCTCTCCAGATTTCTCGTCACCATTTGAAAGGTTTGATAGGTAGACCGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

901

Amino Acids

100.62

Weight (kDa)

5.88

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003038)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20640 AT1G20640 AT1G20640 AT1G76350 AT1G76350 AT1G76350 AT1G76350
fragaria_vesca	FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270 FvH4_5g25270
malus_domestica	MD06G1009200.v1.1 MD16G1285500.v1.1
prunus_persica	Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1 Prupe.5G011200_v2.0.a1
pyrus_communis	pycom06g00770 pycom16g25880
rosa_chinensis	RchiOBHm_Chr7g0215411
rosa_laevigata	RLG00000002660 RLG00000002663
rosa_multiflora	Rmu_co8448299.1_g000001 Rmu_sc0000355.1_g000001 Rmu_sc0005928.1_g000011
rosa_roxburghii	Rroxscaffold_3G00244210
rosa_rugosa	Rorug07G0153300 Rorug07G0153400
rosa_samantha	Rh7AG289800 Rh7BG281700 Rh7CG309400 Rh7DG293400
rosa_wichuraiana	Rw7G024760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2074
AccB1I	GGYRCC	1 cut(s)	478
AccB7I	CCANNNNNTGG	1 cut(s)	710
AccI	GTMKAC	3 cut(s)	1042, 1297, 2692
AciI	CCGC	4 cut(s)	54, 2112, 2438, 2458
AclI	AACGTT	1 cut(s)	1873
AcoI	YGGCCR	5 cut(s)	634, 712, 1877, 2293, 2392
AcsI	RAATTY	6 cut(s)	889, 1469, 2011, 2038, 2146, 2337
AcuI	CTGAAG	1 cut(s)	2103
AdeI	CACNNNGTG	1 cut(s)	357
AfaI	GTAC	4 cut(s)	308, 431, 468, 898
AfiI	CCNNNNNNNGG	5 cut(s)	153, 335, 710, 1845, 2087
AflIII	ACRYGT	1 cut(s)	2582
AjiI	CACGTC	1 cut(s)	1739
AjnI	CCWGG	7 cut(s)	548, 631, 1004, 1116, 1259, 1332, 1504
Alw21I	GWGCWC	3 cut(s)	43, 353, 1307
Alw26I	GTCTC	6 cut(s)	161, 201, 276, 971, 1564, 2010
AlwNI	CAGNNNCTG	1 cut(s)	1505
Ama87I	CYCGRG	2 cut(s)	646, 944
AoxI	GGCC	6 cut(s)	634, 712, 1159, 1877, 2293, 2392
ApeKI	GCWGC	3 cut(s)	935, 1280, 1808
ApoI	RAATTY	6 cut(s)	889, 1469, 2011, 2038, 2146, 2337
AseI	ATTAAT	1 cut(s)	413
AspS9I	GGNCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
AsuC2I	CCSGG	3 cut(s)	638, 2396, 2452
AsuHPI	GGTGA	7 cut(s)	12, 1244, 1498, 1694, 1700, 2070, 2660
AsuII	TTCGAA	2 cut(s)	877, 1777
AvaI	CYCGRG	2 cut(s)	646, 944
AvaII	GGWCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
BalI	TGGCCA	3 cut(s)	714, 1879, 2295
BamHI	GGATCC	2 cut(s)	325, 1363
BanI	GGYRCC	1 cut(s)	478
BanII	GRGCYC	1 cut(s)	43
Bbv12I	GWGCWC	3 cut(s)	43, 353, 1307
BbvI	GCAGC	3 cut(s)	922, 1292, 1795
BccI	CCATC	9 cut(s)	2, 110, 377, 610, 836, 1028, 1888, 2137, 2240
BceAI	ACGGC	1 cut(s)	435
BcgI	CGANNNNNNTGC	2 cut(s)	1757, 1791
BciT130I	CCWGG	7 cut(s)	550, 633, 1006, 1118, 1261, 1334, 1506
BciVI	GTATCC	1 cut(s)	1251
BcnI	CCSGG	3 cut(s)	638, 2396, 2452
BcoDI	GTCTC	6 cut(s)	161, 201, 276, 971, 1564, 2010
BfaI	CTAG	4 cut(s)	464, 540, 746, 885
BfmI	CTRYAG	1 cut(s)	2360
BfuI	GTATCC	1 cut(s)	1251
BglII	AGATCT	2 cut(s)	957, 965
BisI	GCNGC	3 cut(s)	936, 1281, 1809
BlsI	GCNGC	3 cut(s)	937, 1282, 1810
BmcAI	AGTACT	1 cut(s)	898
Bme18I	GGWCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
BmeT110I	CYCGRG	2 cut(s)	646, 944
BmgBI	CACGTC	1 cut(s)	1739
BmgT120I	GGNCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
BmiI	GGNNCC	7 cut(s)	327, 370, 480, 657, 1365, 2023, 2456
BmrI	ACTGGG	1 cut(s)	606
BmuI	ACTGGG	1 cut(s)	606
BpmI	CTGGAG	2 cut(s)	1355, 2639
Bpu14I	TTCGAA	2 cut(s)	877, 1777
BpuEI	CTTGAG	5 cut(s)	266, 881, 982, 2224, 2388
BpuMI	CCSGG	3 cut(s)	638, 2396, 2452
BsaAI	YACGTR	1 cut(s)	429
BsaBI	GATNNNNATC	1 cut(s)	699
BsaI	GGTCTC	1 cut(s)	161
BsaJI	CCNNGG	6 cut(s)	704, 993, 1005, 1117, 1162, 1743
BsaXI	ACNNNNNCTCC	2 cut(s)	1905, 1935
Bsc4I	CCNNNNNNNGG	5 cut(s)	153, 335, 710, 1845, 2087
Bse1I	ACTGG	8 cut(s)	379, 482, 586, 601, 1318, 2151, 2172, 2225
Bse8I	GATNNNNATC	1 cut(s)	699
BseBI	CCWGG	7 cut(s)	550, 633, 1006, 1118, 1261, 1334, 1506
BseDI	CCNNGG	6 cut(s)	704, 993, 1005, 1117, 1162, 1743
BseGI	GGATG	9 cut(s)	10, 82, 101, 1062, 1269, 2188, 2446, 2560, 2617
BseJI	GATNNNNATC	1 cut(s)	699
BseLI	CCNNNNNNNGG	5 cut(s)	153, 335, 710, 1845, 2087
BseMII	CTCAG	9 cut(s)	114, 281, 651, 1131, 1221, 1586, 1953, 2039, 2577
BseNI	ACTGG	8 cut(s)	379, 482, 586, 601, 1318, 2151, 2172, 2225
BseRI	GAGGAG	3 cut(s)	230, 1472, 2615
BseXI	GCAGC	3 cut(s)	922, 1292, 1795
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	1 cut(s)	1378
Bsh1285I	CGRYCG	1 cut(s)	810
BshFI	GGCC	6 cut(s)	636, 714, 1161, 1879, 2295, 2394
BshNI	GGYRCC	1 cut(s)	478
BsiEI	CGRYCG	1 cut(s)	810
BsiHKAI	GWGCWC	3 cut(s)	43, 353, 1307
BsiHKCI	CYCGRG	2 cut(s)	646, 944
BsiSI	CCGG	4 cut(s)	637, 1423, 2395, 2452
BslFI	GGGAC	3 cut(s)	354, 1478, 2035
BslI	CCNNNNNNNGG	5 cut(s)	153, 335, 710, 1845, 2087
BsmAI	GTCTC	6 cut(s)	161, 201, 276, 971, 1564, 2010
BsmBI	CGTCTC	3 cut(s)	201, 971, 2010
BsmFI	GGGAC	3 cut(s)	354, 1478, 2035
BsnI	GGCC	6 cut(s)	636, 714, 1161, 1879, 2295, 2394
Bso31I	GGTCTC	1 cut(s)	161
BsoBI	CYCGRG	2 cut(s)	646, 944
Bsp119I	TTCGAA	2 cut(s)	877, 1777
Bsp1286I	GDGCHC	3 cut(s)	43, 353, 1307
BspACI	CCGC	4 cut(s)	54, 2112, 2438, 2458
BspANI	GGCC	6 cut(s)	636, 714, 1161, 1879, 2295, 2394
BspCNI	CTCAG	9 cut(s)	115, 280, 652, 1132, 1220, 1587, 1952, 2040, 2576
BspHI	TCATGA	2 cut(s)	444, 1126
BspLI	GGNNCC	7 cut(s)	327, 370, 480, 657, 1365, 2023, 2456
BspMAI	CTGCAG	1 cut(s)	2364
BspQI	GCTCTTC	1 cut(s)	1171
BspT104I	TTCGAA	2 cut(s)	877, 1777
BspT107I	GGYRCC	1 cut(s)	478
BspTNI	GGTCTC	1 cut(s)	161
BsrI	ACTGG	8 cut(s)	379, 482, 586, 601, 1318, 2151, 2172, 2225
BssECI	CCNNGG	6 cut(s)	704, 993, 1005, 1117, 1162, 1743
BssT1I	CCWWGG	3 cut(s)	993, 1162, 1743
Bst2UI	CCWGG	7 cut(s)	550, 633, 1006, 1118, 1261, 1334, 1506
Bst4CI	ACNGT	7 cut(s)	206, 726, 1070, 1081, 1398, 1708, 2697
Bst6I	CTCTTC	3 cut(s)	89, 1171, 1659
BstAPI	GCANNNNNTGC	4 cut(s)	988, 1150, 1286, 1958
BstBAI	YACGTR	1 cut(s)	429
BstBI	TTCGAA	2 cut(s)	877, 1777
BstC8I	GCNNGC	3 cut(s)	555, 1278, 2462
BstDSI	CCRYGG	1 cut(s)	704
BstENI	CCTNNNNNAGG	2 cut(s)	333, 1843
BstF5I	GGATG	9 cut(s)	10, 82, 101, 1062, 1269, 2188, 2446, 2560, 2617
BstMAI	GTCTC	6 cut(s)	161, 201, 276, 971, 1564, 2010
BstMCI	CGRYCG	1 cut(s)	810
BstMWI	GCNNNNNNNGC	5 cut(s)	863, 988, 1150, 1286, 1958
BstNI	CCWGG	7 cut(s)	550, 633, 1006, 1118, 1261, 1334, 1506
BstNSI	RCATGY	5 cut(s)	975, 1280, 1422, 2464, 2586
BstSFI	CTRYAG	1 cut(s)	2360
BstV1I	GCAGC	3 cut(s)	922, 1292, 1795
BstX2I	RGATCY	7 cut(s)	325, 948, 957, 965, 1363, 1501, 2321
BstXI	CCANNNNNNTGG	1 cut(s)	1547
BstYI	RGATCY	7 cut(s)	325, 948, 957, 965, 1363, 1501, 2321
BsuI	GTATCC	1 cut(s)	1251
BsuRI	GGCC	6 cut(s)	636, 714, 1161, 1879, 2295, 2394
BtgI	CCRYGG	1 cut(s)	704
BtrI	CACGTC	1 cut(s)	1739
BtsCI	GGATG	9 cut(s)	10, 82, 101, 1062, 1269, 2188, 2446, 2560, 2617
BtsIMutI	CAGTG	7 cut(s)	372, 489, 1066, 1311, 1394, 1486, 2378
Cac8I	GCNNGC	3 cut(s)	555, 1278, 2462
CaiI	CAGNNNCTG	1 cut(s)	1505
CciI	TCATGA	2 cut(s)	444, 1126
Cfr13I	GGNCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
CseI	GACGC	2 cut(s)	412, 988
Csp6I	GTAC	4 cut(s)	307, 430, 467, 897
CviQI	GTAC	4 cut(s)	307, 430, 467, 897
DraI	TTTAAA	1 cut(s)	238
DraIII	CACNNNGTG	1 cut(s)	357
DrdI	GACNNNNNNGTC	1 cut(s)	2074
DseDI	GACNNNNNNGTC	1 cut(s)	2074
EaeI	YGGCCR	5 cut(s)	634, 712, 1877, 2293, 2392
Eam1104I	CTCTTC	3 cut(s)	89, 1171, 1659
EarI	CTCTTC	3 cut(s)	89, 1171, 1659
Ecl136II	GAGCTC	1 cut(s)	41
Eco130I	CCWWGG	3 cut(s)	993, 1162, 1743
Eco24I	GRGCYC	1 cut(s)	43
Eco31I	GGTCTC	1 cut(s)	161
Eco32I	GATATC	2 cut(s)	571, 1759
Eco47I	GGWCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
Eco53kI	GAGCTC	1 cut(s)	41
Eco57I	CTGAAG	1 cut(s)	2103
Eco88I	CYCGRG	2 cut(s)	646, 944
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	2 cut(s)	333, 1843
EcoO109I	RGGNCCY	1 cut(s)	254
EcoRI	GAATTC	1 cut(s)	2146
EcoRII	CCWGG	7 cut(s)	548, 631, 1004, 1116, 1259, 1332, 1504
EcoRV	GATATC	2 cut(s)	571, 1759
EcoT14I	CCWWGG	3 cut(s)	993, 1162, 1743
EcoT22I	ATGCAT	1 cut(s)	1019
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	3 cut(s)	993, 1162, 1743
Esp3I	CGTCTC	3 cut(s)	201, 971, 2010
FaqI	GGGAC	3 cut(s)	354, 1478, 2035
FauNDI	CATATG	1 cut(s)	2434
FblI	GTMKAC	3 cut(s)	1042, 1297, 2692
Fnu4HI	GCNGC	3 cut(s)	936, 1281, 1809
FokI	GGATG	9 cut(s)	17, 89, 108, 1049, 1276, 2175, 2453, 2567, 2624
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	3 cut(s)	936, 1281, 1809
FspBI	CTAG	4 cut(s)	464, 540, 746, 885
GluI	GCNGC	3 cut(s)	936, 1281, 1809
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	2 cut(s)	1355, 2639
HaeIII	GGCC	6 cut(s)	636, 714, 1161, 1879, 2295, 2394
HapII	CCGG	4 cut(s)	637, 1423, 2395, 2452
HgaI	GACGC	2 cut(s)	412, 988
HincII	GTYRAC	2 cut(s)	1043, 2580
HindII	GTYRAC	2 cut(s)	1043, 2580
HinfI	GANTC	9 cut(s)	50, 262, 605, 667, 1624, 1634, 1937, 2368, 2561
HpaI	GTTAAC	1 cut(s)	2580
HpaII	CCGG	4 cut(s)	637, 1423, 2395, 2452
HphI	GGTGA	7 cut(s)	12, 1244, 1498, 1694, 1700, 2070, 2660
Hpy166II	GTNNAC	5 cut(s)	666, 1043, 1298, 2580, 2693
Hpy8I	GTNNAC	5 cut(s)	666, 1043, 1298, 2580, 2693
Hpy99I	CGWCG	1 cut(s)	2701
HpyAV	CCTTC	8 cut(s)	245, 646, 761, 1891, 1940, 2078, 2203, 2385
HpyCH4III	ACNGT	7 cut(s)	206, 726, 1070, 1081, 1398, 1708, 2697
HpyCH4IV	ACGT	6 cut(s)	161, 428, 1294, 1738, 1873, 2003
HpyF10VI	GCNNNNNNNGC	5 cut(s)	863, 988, 1150, 1286, 1958
HpySE526I	ACGT	6 cut(s)	161, 428, 1294, 1738, 1873, 2003
KspAI	GTTAAC	1 cut(s)	2580
LguI	GCTCTTC	1 cut(s)	1171
LmnI	GCTCC	4 cut(s)	38, 1302, 1425, 2308
Lsp1109I	GCAGC	3 cut(s)	922, 1292, 1795
MaeI	CTAG	4 cut(s)	464, 540, 746, 885
MaeII	ACGT	6 cut(s)	161, 428, 1294, 1738, 1873, 2003
MflI	RGATCY	7 cut(s)	325, 948, 957, 965, 1363, 1501, 2321
MhlI	GDGCHC	3 cut(s)	43, 353, 1307
MlsI	TGGCCA	3 cut(s)	714, 1879, 2295
MluNI	TGGCCA	3 cut(s)	714, 1879, 2295
MlyI	GAGTC	3 cut(s)	661, 1931, 2555
MmeI	TCCRAC	6 cut(s)	84, 144, 1153, 1564, 1948, 2209
Mox20I	TGGCCA	3 cut(s)	714, 1879, 2295
Mph1103I	ATGCAT	1 cut(s)	1019
MscI	TGGCCA	3 cut(s)	714, 1879, 2295
MslI	CAYNNNNRTG	4 cut(s)	1050, 1354, 1479, 2134
Msp20I	TGGCCA	3 cut(s)	714, 1879, 2295
MspA1I	CMGCKG	1 cut(s)	1283
MspI	CCGG	4 cut(s)	637, 1423, 2395, 2452
MvaI	CCWGG	7 cut(s)	550, 633, 1006, 1118, 1261, 1334, 1506
MwoI	GCNNNNNNNGC	5 cut(s)	863, 988, 1150, 1286, 1958
NciI	CCSGG	3 cut(s)	638, 2396, 2452
NdeI	CATATG	1 cut(s)	2434
NlaIV	GGNNCC	7 cut(s)	327, 370, 480, 657, 1365, 2023, 2456
NmuCI	GTSAC	8 cut(s)	18, 400, 917, 1438, 1904, 2051, 2076, 2666
NsiI	ATGCAT	1 cut(s)	1019
NspI	RCATGY	5 cut(s)	975, 1280, 1422, 2464, 2586
NspV	TTCGAA	2 cut(s)	877, 1777
PaeI	GCATGC	2 cut(s)	1280, 2464
PagI	TCATGA	2 cut(s)	444, 1126
PciI	ACATGT	1 cut(s)	2582
PciSI	GCTCTTC	1 cut(s)	1171
PcsI	WCGNNNNNNNCGW	1 cut(s)	425
PfeI	GAWTC	6 cut(s)	50, 262, 605, 1624, 1634, 2368
PflMI	CCANNNNNTGG	1 cut(s)	710
PfoI	TCCNGGA	2 cut(s)	1332, 1504
PkrI	GCNGC	3 cut(s)	937, 1282, 1810
PleI	GAGTC	3 cut(s)	661, 1931, 2555
PpsI	GAGTC	3 cut(s)	661, 1931, 2555
Ppu21I	YACGTR	1 cut(s)	429
PpuMI	RGGWCCY	1 cut(s)	254
PscI	ACATGT	1 cut(s)	2582
PshBI	ATTAAT	1 cut(s)	413
Psp124BI	GAGCTC	1 cut(s)	43
Psp1406I	AACGTT	1 cut(s)	1873
Psp5II	RGGWCCY	1 cut(s)	254
Psp6I	CCWGG	7 cut(s)	548, 631, 1004, 1116, 1259, 1332, 1504
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	7 cut(s)	548, 631, 1004, 1116, 1259, 1332, 1504
PspN4I	GGNNCC	7 cut(s)	327, 370, 480, 657, 1365, 2023, 2456
PspPI	GGNCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
PspPPI	RGGWCCY	1 cut(s)	254
PstI	CTGCAG	1 cut(s)	2364
PstNI	CAGNNNCTG	1 cut(s)	1505
PsuI	RGATCY	7 cut(s)	325, 948, 957, 965, 1363, 1501, 2321
PvuII	CAGCTG	1 cut(s)	1283
RsaI	GTAC	4 cut(s)	308, 431, 468, 898
RsaNI	GTAC	4 cut(s)	307, 430, 467, 897
RseI	CAYNNNNRTG	4 cut(s)	1050, 1354, 1479, 2134
SacI	GAGCTC	1 cut(s)	43
SalI	GTCGAC	1 cut(s)	1041
SapI	GCTCTTC	1 cut(s)	1171
SatI	GCNGC	3 cut(s)	936, 1281, 1809
Sau96I	GGNCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
ScaI	AGTACT	1 cut(s)	898
SchI	GAGTC	3 cut(s)	661, 1931, 2555
SduI	GDGCHC	3 cut(s)	43, 353, 1307
SfcI	CTRYAG	1 cut(s)	2360
SfuI	TTCGAA	2 cut(s)	877, 1777
SinI	GGWCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
SmiMI	CAYNNNNRTG	4 cut(s)	1050, 1354, 1479, 2134
SmlI	CTYRAG	5 cut(s)	245, 860, 961, 2239, 2403
SmoI	CTYRAG	5 cut(s)	245, 860, 961, 2239, 2403
SphI	GCATGC	2 cut(s)	1280, 2464
SsiI	CCGC	4 cut(s)	54, 2112, 2438, 2458
SspI	AATATT	1 cut(s)	1784
SspMI	CTAG	4 cut(s)	464, 540, 746, 885
SstI	GAGCTC	1 cut(s)	43
StyI	CCWWGG	3 cut(s)	993, 1162, 1743
TaaI	ACNGT	7 cut(s)	206, 726, 1070, 1081, 1398, 1708, 2697
TaiI	ACGT	6 cut(s)	164, 431, 1297, 1741, 1876, 2006
TaqII	GACCGA	1 cut(s)	824
TatI	WGTACW	2 cut(s)	466, 896
TfiI	GAWTC	6 cut(s)	50, 262, 605, 1624, 1634, 2368
TscAI	CASTG	7 cut(s)	379, 489, 1073, 1318, 1401, 1486, 2385
TseFI	GTSAC	8 cut(s)	18, 400, 917, 1438, 1904, 2051, 2076, 2666
TseI	GCWGC	3 cut(s)	935, 1280, 1808
Tsp45I	GTSAC	8 cut(s)	18, 400, 917, 1438, 1904, 2051, 2076, 2666
TspGWI	ACGGA	2 cut(s)	1315, 2321
TspRI	CASTG	7 cut(s)	379, 489, 1073, 1318, 1401, 1486, 2385
Van91I	CCANNNNNTGG	1 cut(s)	710
VpaK11BI	GGWCC	6 cut(s)	119, 254, 368, 1508, 1537, 2022
VspI	ATTAAT	1 cut(s)	413
XagI	CCTNNNNNAGG	2 cut(s)	333, 1843
XapI	RAATTY	6 cut(s)	889, 1469, 2011, 2038, 2146, 2337
XbaI	TCTAGA	1 cut(s)	884
XceI	RCATGY	5 cut(s)	975, 1280, 1422, 2464, 2586
XcmI	CCANNNNNNNNNTGG	2 cut(s)	593, 1169
XmiI	GTMKAC	3 cut(s)	1042, 1297, 2692
XspI	CTAG	4 cut(s)	464, 540, 746, 885
ZrmI	AGTACT	1 cut(s)	898
Zsp2I	ATGCAT	1 cut(s)	1019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.