Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001216

Physical Location & Seq

Genomic Coordinates Reverse (-)

11538011 .. 11542928

Gene Structure 4918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g07090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGGTTGCCTTTGGGAAAAAGCTGAAGGAAAGACAAGTTCAAGAATGGCAGGGGTATTACATCAATTATAAACTTATGAAGAAAAAAGTAAAACACTATTCTCAACAAATTAAAGTTGGAGCAATAGACCGGAGGCATGTCCTAAAGGACTTTTCAAGGATGCTGGATAATCAGATTGAGACTATTGTCCTTTTCCTGTTGGAACAACAAGGACTACTTGCAAGCAGGATAGCCAAACTTGGAGAAAAACATGATGCTCTTCAGCAGCAACCTGATATATCCAAAATATCTGAACTACGAGAAGCTTATAGACAAGTGGGCCGTGATCTTCTGAAGCTTCTCTTTTTTGTTGAGGTGAATGCCATTGGTCTGCGTAAGATATTGAAGAAGTTCGATAAACGCTTTGGATATAGATTCACCGACTACTATGTCAAAACTCGTGCGAATCATCCTTACTCACAGCTCCAGCAAGTATTTAAGCATGTGGGCATAGGGGCTGTTGTAGGAGCTGTATCTCGCAATCTTCATGAACTTCAGGACCGACAAGGAAGCTACTTATCAATATATGATCAGCCTGCTCTTCCCCTCCAGGATCCTGTTATTGATTCAGTAAAAGCAGCTGTGGACAGGTTAACCAATTCAACAAACTTTCTGAACTTTTTGGGACAACATGCACTTATTCTGCAAGAAGATATGCTGCCTGCTCCCATGGAGGAACAAGTTGATGATCAGAGATACCACTTGATGTCACTTGTCTTGAACTTAGTGAACACATTCCTTTACATGGTCAATACATATATTATTGTTCCTACAGCAGATGACTACTCCATGAGCCTTGGTGCTGCAGCGACAGTTTGTGGTGTTGTGATTGGAGCAATGGCTGTTGCGCAGGTGTTTTCTTCAGTGTATTTTAGTGCATGGTCAAATCGTTCATACTTCAAGCCTCTTGTATTTAGCAGTATTGTTCTTTTTGTGGGAAACACCCTGTATGCTCTGGCTTATGATCTTAATTCGATATGGGTACTGTTGATTGGTCGTCTTTTCTGTGGGCTGGGTTCTGCAAGAGCTGTTAACAGGCGTTATATTAGTGATTGTGTACCTCTGAAAATCCGCATGCAGGCGTCAGCGGCTTTTGTTAGTGCTAGTGCCCTTGGAATGGCATGTGGTCCTGCTCTTGCTGGCTTACTTCAAACTAATTTCAAGATTTACAAGCTTACATTCAATCAAGACACTTTGCCTGGTTGGGTTATGGCTATAGCCTGGCTTCTATACTTAATATGGCTGTGGATCTCATTTAGAGAACCTGCTCGTGAAGATGAAGTGAGTTCTGTACAAGAAGGATCCAATAGCGGAACAGCAGTAAGCGATGCACTCGAGAAAGGTCTTAATCAACCTTTGCTCATTAGTGCTGAAGACAGGAGAGAAGATGAAGATGGTGACCAAGATATTGATGAAAGTGAAGAAGCTCCTGAGGAATCTCGTCGACCAGCCACTTCAATTCAATCTGCATATCGACTACTTACACCCTCTGTAAAGGTTCAATTGTTGATATATTTCATGCTCAAGTATGCTATGGAGATTTTACTTTCAGAATCTAGTGTTGTTACGACATACTACTTTAGCTGGAATACTAGCGAAGTCGCAATTTTTCTGGCGTGTCTTGGATTAACCGTTCTTCCAGTAAATGTTCTTGTTGGGAGCTACATTAGCAACATGTTTGAAGACAGGCTAATTTTATTAGTATCTGAAATAGTGGTTTGCATAGGCATAGTTATGAGCTTCCATATGTTCAATCCGTACTCTGTGATACAATACGTCAGCTCAGGGCTCATCATGTTTGTTTCGGCTGAAGTACTTGAAGGTGTCAACTTGTCACTTCTCTCGAGGGTTATGTCATCGAGGCTTTCCCGTGGAACATACAATGGTGGATTACTTTCAACAGAAGCTGGGACGCTCGCTCGAGTAGTTGCAGATGCCACCATAACTCTGGCCGGATACTTGGGAGAAAGTAGGCTCTTGAACATCACCTTGCTTCCGTCCCTCCTGATTTGCGTTACTTCCATTATTGCCACCTGCTACACATACAACTCTCTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0009705 GO:0015698 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 SPX

Protein Analysis

700

Amino Acids

78.35

Weight (kDa)

6.54

Isoelectric Point (pI)

39.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	4 - 37	5.9e-06	SPX domain
SPX	PF03105	98 - 146	4.4e-07	SPX domain
MFS_1	PF07690	256 - 642	6.1e-25	Major Facilitator Superfamily
Sugar_tr	PF00083	261 - 422	1.8e-06	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT4G11810 AT4G11810 AT4G11810 AT4G22990 AT4G22990 AT4G22990
fragaria_vesca	FvH4_5g01390 FvH4_7g12920 FvH4_7g12920 FvH4_7g12920
malus_domestica	MD02G1195400.v1.1 MD04G1068900.v1.1 MD06G1069900.v1.1
prunus_persica	Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1
pyrus_communis	pycom02g15930 pycom04g06270 pycom06g07090
rosa_chinensis	RchiOBHm_Chr1g0352001 RchiOBHm_Chr7g0199491
rosa_laevigata	RLG00000003789 RLG00000028368
rosa_multiflora	Rmu_sc0003549.1_g000001 Rmu_sc0004009.1_g000006 Rmu_sc0007728.1_g000012
rosa_roxburghii	Rroxscaffold_3G00256680 Rroxscaffold_4G00303360
rosa_rugosa	Rorug01G0223300 Rorug01G0223400 Rorug07G0054600 Rorug07G0054700 Rorug07G0054800 Rorug07G0054900
rosa_samantha	Rh1AG237400 Rh1BG207600 Rh1CG221800 Rh1DG234600 Rh7AG179600 Rh7BG182900 Rh7CG188200 Rh7DG182300
rosa_wichuraiana	Rw1G020650 Rw7G015770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	69
AarI	CACCTGC	2 cut(s)	880, 2081
AasI	GACNNNNNNGTC	1 cut(s)	428
Acc16I	TGCGCA	1 cut(s)	888
Acc36I	ACCTGC	3 cut(s)	880, 1312, 2081
AccI	GTMKAC	1 cut(s)	1483
AciI	CCGC	3 cut(s)	1111, 1127, 1350
AclWI	GGATC	5 cut(s)	587, 600, 1295, 1335, 1348
AcoI	YGGCCR	1 cut(s)	1989
AcuI	CTGAAG	7 cut(s)	44, 245, 353, 518, 885, 1431, 1869
AcyI	GRCGYC	1 cut(s)	1121
AfaI	GTAC	5 cut(s)	1023, 1098, 1332, 1799, 1854
AfiI	CCNNNNNNNGG	3 cut(s)	784, 1117, 1156
AflIII	ACRYGT	1 cut(s)	1713
AjnI	CCWGG	3 cut(s)	588, 1237, 1259
AloI	GAACNNNNNNTCC	2 cut(s)	1656, 1688
Alw26I	GTCTC	1 cut(s)	173
AlwI	GGATC	5 cut(s)	587, 600, 1295, 1335, 1348
AlwNI	CAGNNNCTG	1 cut(s)	1946
Ama87I	CYCGRG	3 cut(s)	1373, 1882, 1959
AoxI	GGCC	2 cut(s)	319, 1989
ApeKI	GCWGC	5 cut(s)	265, 617, 697, 842, 845
Asp700I	GAANNNNTTC	2 cut(s)	389, 773
AspLEI	GCGC	1 cut(s)	889
AspS9I	GGNCC	3 cut(s)	319, 538, 1166
AsuHPI	GGTGA	4 cut(s)	367, 409, 1448, 2017
AvaI	CYCGRG	3 cut(s)	1373, 1882, 1959
AvaII	GGWCC	2 cut(s)	538, 1166
AxyI	CCTNAGG	1 cut(s)	1470
BaeGI	GKGCMC	1 cut(s)	1150
BamHI	GGATCC	2 cut(s)	592, 1340
BanII	GRGCYC	1 cut(s)	1830
BauI	CACGAG	2 cut(s)	438, 1308
BbsI	GAAGAC	2 cut(s)	1419, 1728
BbvI	GCAGC	5 cut(s)	277, 629, 684, 829, 857
BccI	CCATC	1 cut(s)	1427
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	3 cut(s)	590, 1239, 1261
BciVI	GTATCC	1 cut(s)	1988
BclI	TGATCA	2 cut(s)	568, 727
BcoDI	GTCTC	1 cut(s)	173
BfaI	CTAG	3 cut(s)	1143, 1596, 1632
BfmI	CTRYAG	3 cut(s)	810, 843, 1254
BfuAI	ACCTGC	3 cut(s)	880, 1312, 2081
BfuI	GTATCC	1 cut(s)	1988
BisI	GCNGC	6 cut(s)	266, 618, 698, 843, 846, 1128
BlsI	GCNGC	6 cut(s)	267, 619, 699, 844, 847, 1129
BmcAI	AGTACT	1 cut(s)	1854
Bme1390I	CCNGG	3 cut(s)	590, 1239, 1261
Bme18I	GGWCC	2 cut(s)	538, 1166
BmeT110I	CYCGRG	3 cut(s)	1373, 1882, 1959
BmgT120I	GGNCC	3 cut(s)	319, 538, 1166
BmiI	GGNNCC	2 cut(s)	594, 1342
BmrFI	CCNGG	3 cut(s)	590, 1239, 1261
BmsI	GCATC	4 cut(s)	150, 244, 1357, 1963
BoxI	GACNNNNGTC	1 cut(s)	185
BpiI	GAAGAC	2 cut(s)	1419, 1728
BpmI	CTGGAG	2 cut(s)	449, 572
Bpu10I	CCTNAGC	1 cut(s)	1822
BpuEI	CTTGAG	1 cut(s)	1547
BsaHI	GRCGYC	1 cut(s)	1121
BsaJI	CCNNGG	4 cut(s)	708, 835, 1150, 1909
BsaWI	WCCGGW	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	3 cut(s)	784, 1117, 1156
Bse1I	ACTGG	1 cut(s)	1679
Bse21I	CCTNAGG	1 cut(s)	1470
Bse3DI	GCAATG	1 cut(s)	882
BseBI	CCWGG	3 cut(s)	590, 1239, 1261
BseDI	CCNNGG	4 cut(s)	708, 835, 1150, 1909
BseGI	GGATG	2 cut(s)	165, 448
BseLI	CCNNNNNNNGG	3 cut(s)	784, 1117, 1156
BseMI	GCAATG	1 cut(s)	882
BseMII	CTCAG	2 cut(s)	1461, 1836
BseNI	ACTGG	1 cut(s)	1679
BseSI	GKGCMC	1 cut(s)	1150
BseXI	GCAGC	5 cut(s)	277, 629, 684, 829, 857
BseYI	CCCAGC	2 cut(s)	1051, 1946
BshFI	GGCC	2 cut(s)	321, 1991
BsiHKCI	CYCGRG	3 cut(s)	1373, 1882, 1959
BsiSI	CCGG	2 cut(s)	130, 1992
BslFI	GGGAC	3 cut(s)	678, 1963, 2023
BslI	CCNNNNNNNGG	3 cut(s)	784, 1117, 1156
BsmAI	GTCTC	1 cut(s)	173
BsmFI	GGGAC	3 cut(s)	678, 1963, 2023
BsmI	GAATGC	1 cut(s)	364
BsnI	GGCC	2 cut(s)	321, 1991
BsoBI	CYCGRG	3 cut(s)	1373, 1882, 1959
Bsp1286I	GDGCHC	2 cut(s)	1150, 1830
Bsp1407I	TGTACA	1 cut(s)	1330
Bsp143I	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
Bsp19I	CCATGG	1 cut(s)	708
BspACI	CCGC	3 cut(s)	1111, 1127, 1350
BspANI	GGCC	2 cut(s)	321, 1991
BspCNI	CTCAG	2 cut(s)	1462, 1835
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	2 cut(s)	594, 1342
BspMAI	CTGCAG	1 cut(s)	847
BspMI	ACCTGC	3 cut(s)	880, 1312, 2081
BspPI	GGATC	5 cut(s)	587, 600, 1295, 1335, 1348
BspQI	GCTCTTC	2 cut(s)	264, 585
BsrDI	GCAATG	1 cut(s)	882
BsrGI	TGTACA	1 cut(s)	1330
BsrI	ACTGG	1 cut(s)	1679
BssECI	CCNNGG	4 cut(s)	708, 835, 1150, 1909
BssMI	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
BssNI	GRCGYC	1 cut(s)	1121
BssSI	CACGAG	2 cut(s)	438, 1308
BssT1I	CCWWGG	3 cut(s)	708, 835, 1150
Bst2BI	CACGAG	2 cut(s)	438, 1308
Bst2UI	CCWGG	3 cut(s)	590, 1239, 1261
Bst4CI	ACNGT	3 cut(s)	853, 1026, 1672
Bst6I	CTCTTC	2 cut(s)	264, 585
BstACI	GRCGYC	1 cut(s)	1121
BstAUI	TGTACA	1 cut(s)	1330
BstC8I	GCNNGC	7 cut(s)	223, 576, 702, 1115, 1119, 1180, 1956
BstDEI	CTNAG	3 cut(s)	763, 1470, 1822
BstDSI	CCRYGG	2 cut(s)	708, 1909
BstEII	GGTNACC	1 cut(s)	1436
BstF5I	GGATG	2 cut(s)	165, 448
BstHHI	GCGC	1 cut(s)	889
BstKTI	GATC	7 cut(s)	328, 571, 595, 730, 1006, 1290, 1343
BstMAI	GTCTC	1 cut(s)	173
BstMBI	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
BstMWI	GCNNNNNNNGC	2 cut(s)	1127, 1707
BstNI	CCWGG	3 cut(s)	590, 1239, 1261
BstNSI	RCATGY	6 cut(s)	140, 485, 674, 1117, 1164, 1717
BstPAI	GACNNNNGTC	1 cut(s)	185
BstPI	GGTNACC	1 cut(s)	1436
BstSCI	CCNGG	3 cut(s)	588, 1237, 1259
BstSFI	CTRYAG	3 cut(s)	810, 843, 1254
BstSLI	GKGCMC	1 cut(s)	1150
BstV1I	GCAGC	5 cut(s)	277, 629, 684, 829, 857
BstV2I	GAAGAC	2 cut(s)	1419, 1728
BstX2I	RGATCY	3 cut(s)	592, 1287, 1340
BstXI	CCANNNNNNTGG	1 cut(s)	1987
BstYI	RGATCY	3 cut(s)	592, 1287, 1340
Bsu36I	CCTNAGG	1 cut(s)	1470
BsuI	GTATCC	1 cut(s)	1988
BsuRI	GGCC	2 cut(s)	321, 1991
BtgI	CCRYGG	2 cut(s)	708, 1909
BtgZI	GCGATG	1 cut(s)	1380
BtsCI	GGATG	2 cut(s)	165, 448
BtsIMutI	CAGTG	1 cut(s)	909
BveI	ACCTGC	3 cut(s)	880, 1312, 2081
Cac8I	GCNNGC	7 cut(s)	223, 576, 702, 1115, 1119, 1180, 1956
CaiI	CAGNNNCTG	1 cut(s)	1946
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	1 cut(s)	889
Cfr13I	GGNCC	3 cut(s)	319, 538, 1166
CseI	GACGC	2 cut(s)	1110, 1960
Csp6I	GTAC	5 cut(s)	1022, 1097, 1331, 1798, 1853
CviQI	GTAC	5 cut(s)	1022, 1097, 1331, 1798, 1853
DdeI	CTNAG	3 cut(s)	763, 1470, 1822
DpnI	GATC	7 cut(s)	327, 570, 594, 729, 1005, 1289, 1342
DpnII	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
DrdI	GACNNNNNNGTC	1 cut(s)	428
DseDI	GACNNNNNNGTC	1 cut(s)	428
EaeI	YGGCCR	1 cut(s)	1989
Eam1104I	CTCTTC	2 cut(s)	264, 585
EarI	CTCTTC	2 cut(s)	264, 585
Eco130I	CCWWGG	3 cut(s)	708, 835, 1150
Eco24I	GRGCYC	1 cut(s)	1830
Eco47I	GGWCC	2 cut(s)	538, 1166
Eco57I	CTGAAG	7 cut(s)	44, 245, 353, 518, 885, 1431, 1869
Eco81I	CCTNAGG	1 cut(s)	1470
Eco88I	CYCGRG	3 cut(s)	1373, 1882, 1959
Eco91I	GGTNACC	1 cut(s)	1436
EcoO65I	GGTNACC	1 cut(s)	1436
EcoRII	CCWGG	3 cut(s)	588, 1237, 1259
EcoT14I	CCWWGG	3 cut(s)	708, 835, 1150
EcoT38I	GRGCYC	1 cut(s)	1830
ErhI	CCWWGG	3 cut(s)	708, 835, 1150
FalI	AAGNNNNNCTT	4 cut(s)	201, 233, 326, 358
FaqI	GGGAC	3 cut(s)	678, 1963, 2023
FauNDI	CATATG	1 cut(s)	1785
FbaI	TGATCA	2 cut(s)	568, 727
FblI	GTMKAC	1 cut(s)	1483
Fnu4HI	GCNGC	6 cut(s)	266, 618, 698, 843, 846, 1128
FokI	GGATG	2 cut(s)	172, 435
FriOI	GRGCYC	1 cut(s)	1830
Fsp4HI	GCNGC	6 cut(s)	266, 618, 698, 843, 846, 1128
FspBI	CTAG	3 cut(s)	1143, 1596, 1632
FspI	TGCGCA	1 cut(s)	888
GlaI	GCGC	1 cut(s)	888
GluI	GCNGC	6 cut(s)	266, 618, 698, 843, 846, 1128
GsaI	CCCAGC	2 cut(s)	1055, 1950
GsuI	CTGGAG	2 cut(s)	449, 572
HaeIII	GGCC	2 cut(s)	321, 1991
HapII	CCGG	2 cut(s)	130, 1992
HgaI	GACGC	2 cut(s)	1110, 1960
HhaI	GCGC	1 cut(s)	889
Hin1I	GRCGYC	1 cut(s)	1121
Hin6I	GCGC	1 cut(s)	887
HinP1I	GCGC	1 cut(s)	887
HincII	GTYRAC	4 cut(s)	633, 1072, 1484, 1867
HindII	GTYRAC	4 cut(s)	633, 1072, 1484, 1867
HindIII	AAGCTT	3 cut(s)	303, 335, 1211
HinfI	GANTC	5 cut(s)	414, 445, 605, 1475, 1592
HpaI	GTTAAC	2 cut(s)	633, 1072
HpaII	CCGG	2 cut(s)	130, 1992
HphI	GGTGA	4 cut(s)	367, 409, 1448, 2017
Hpy166II	GTNNAC	7 cut(s)	625, 633, 769, 1072, 1097, 1484, 1867
Hpy188I	TCNGA	8 cut(s)	174, 292, 333, 654, 732, 1104, 1591, 1747
Hpy8I	GTNNAC	7 cut(s)	625, 633, 769, 1072, 1097, 1484, 1867
Hpy99I	CGWCG	1 cut(s)	1485
HpyAV	CCTTC	3 cut(s)	19, 1331, 1853
HpyCH4III	ACNGT	3 cut(s)	853, 1026, 1672
HpyCH4IV	ACGT	1 cut(s)	1815
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1127, 1707
HpyF3I	CTNAG	3 cut(s)	763, 1470, 1822
HpySE526I	ACGT	1 cut(s)	1815
Hsp92I	GRCGYC	1 cut(s)	1121
HspAI	GCGC	1 cut(s)	887
Ksp22I	TGATCA	2 cut(s)	568, 727
KspAI	GTTAAC	2 cut(s)	633, 1072
Kzo9I	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
LguI	GCTCTTC	2 cut(s)	264, 585
LmnI	GCTCC	7 cut(s)	119, 468, 506, 709, 872, 1471, 1698
Lsp1109I	GCAGC	5 cut(s)	277, 629, 684, 829, 857
LweI	GCATC	4 cut(s)	150, 244, 1357, 1963
MaeI	CTAG	3 cut(s)	1143, 1596, 1632
MaeII	ACGT	1 cut(s)	1815
MaeIII	GTNAC	5 cut(s)	747, 1436, 1603, 1872, 2053
MalI	GATC	7 cut(s)	327, 570, 594, 729, 1005, 1289, 1342
MboI	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
MfeI	CAATTG	1 cut(s)	1541
MflI	RGATCY	3 cut(s)	592, 1287, 1340
MhlI	GDGCHC	2 cut(s)	1150, 1830
MluCI	AATT	9 cut(s)	64, 108, 637, 1009, 1195, 1497, 1541, 1644, 1731
MmeI	TCCRAC	2 cut(s)	97, 180
MroXI	GAANNNNTTC	2 cut(s)	389, 773
MseI	TTAA	8 cut(s)	111, 477, 632, 1008, 1071, 1274, 1386, 1667
MslI	CAYNNNNRTG	1 cut(s)	1772
MspA1I	CMGCKG	2 cut(s)	620, 1127
MspI	CCGG	2 cut(s)	130, 1992
MspR9I	CCNGG	3 cut(s)	590, 1239, 1261
MunI	CAATTG	1 cut(s)	1541
Mva1269I	GAATGC	1 cut(s)	364
MvaI	CCWGG	3 cut(s)	590, 1239, 1261
MwoI	GCNNNNNNNGC	2 cut(s)	1127, 1707
NcoI	CCATGG	1 cut(s)	708
NdeI	CATATG	1 cut(s)	1785
NdeII	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
NlaIV	GGNNCC	2 cut(s)	594, 1342
NmuCI	GTSAC	3 cut(s)	747, 1436, 1872
NsbI	TGCGCA	1 cut(s)	888
NspI	RCATGY	6 cut(s)	140, 485, 674, 1117, 1164, 1717
PaeI	GCATGC	1 cut(s)	1117
PaeR7I	CTCGAG	3 cut(s)	1373, 1882, 1959
PagI	TCATGA	1 cut(s)	526
PaqCI	CACCTGC	2 cut(s)	880, 2081
PciI	ACATGT	1 cut(s)	1713
PciSI	GCTCTTC	2 cut(s)	264, 585
PctI	GAATGC	1 cut(s)	364
PdmI	GAANNNNTTC	2 cut(s)	389, 773
PfeI	GAWTC	5 cut(s)	414, 445, 605, 1475, 1592
PfoI	TCCNGGA	1 cut(s)	588
PkrI	GCNGC	6 cut(s)	267, 619, 699, 844, 847, 1129
PscI	ACATGT	1 cut(s)	1713
PshAI	GACNNNNGTC	1 cut(s)	185
PsiI	TTATAA	1 cut(s)	69
Psp6I	CCWGG	3 cut(s)	588, 1237, 1259
PspEI	GGTNACC	1 cut(s)	1436
PspFI	CCCAGC	2 cut(s)	1051, 1946
PspGI	CCWGG	3 cut(s)	588, 1237, 1259
PspN4I	GGNNCC	2 cut(s)	594, 1342
PspPI	GGNCC	3 cut(s)	319, 538, 1166
PspXI	VCTCGAGB	1 cut(s)	1959
PstI	CTGCAG	1 cut(s)	847
PstNI	CAGNNNCTG	1 cut(s)	1946
PsuI	RGATCY	3 cut(s)	592, 1287, 1340
PvuII	CAGCTG	1 cut(s)	620
RsaI	GTAC	5 cut(s)	1023, 1098, 1332, 1799, 1854
RsaNI	GTAC	5 cut(s)	1022, 1097, 1331, 1798, 1853
RseI	CAYNNNNRTG	1 cut(s)	1772
SalI	GTCGAC	1 cut(s)	1482
SapI	GCTCTTC	2 cut(s)	264, 585
SaqAI	TTAA	8 cut(s)	111, 477, 632, 1008, 1071, 1274, 1386, 1667
SatI	GCNGC	6 cut(s)	266, 618, 698, 843, 846, 1128
Sau3AI	GATC	7 cut(s)	325, 568, 592, 727, 1003, 1287, 1340
Sau96I	GGNCC	3 cut(s)	319, 538, 1166
ScaI	AGTACT	1 cut(s)	1854
ScrFI	CCNGG	3 cut(s)	590, 1239, 1261
SduI	GDGCHC	2 cut(s)	1150, 1830
SfaNI	GCATC	4 cut(s)	150, 244, 1357, 1963
SfcI	CTRYAG	3 cut(s)	810, 843, 1254
Sfr274I	CTCGAG	3 cut(s)	1373, 1882, 1959
SinI	GGWCC	2 cut(s)	538, 1166
SlaI	CTCGAG	3 cut(s)	1373, 1882, 1959
SmiMI	CAYNNNNRTG	1 cut(s)	1772
SmlI	CTYRAG	4 cut(s)	1373, 1562, 1882, 1959
SmoI	CTYRAG	4 cut(s)	1373, 1562, 1882, 1959
SphI	GCATGC	1 cut(s)	1117
Sse9I	AATT	9 cut(s)	64, 108, 637, 1009, 1195, 1497, 1541, 1644, 1731
SsiI	CCGC	3 cut(s)	1111, 1127, 1350
SspMI	CTAG	3 cut(s)	1143, 1596, 1632
StyD4I	CCNGG	3 cut(s)	588, 1237, 1259
StyI	CCWWGG	3 cut(s)	708, 835, 1150
TaaI	ACNGT	3 cut(s)	853, 1026, 1672
TaiI	ACGT	1 cut(s)	1818
TaqI	TCGA	8 cut(s)	393, 1013, 1374, 1483, 1513, 1883, 1898, 1960
TaqII	GACCGA	1 cut(s)	555
TasI	AATT	9 cut(s)	64, 108, 637, 1009, 1195, 1497, 1541, 1644, 1731
TatI	WGTACW	2 cut(s)	1330, 1852
TauI	GCSGC	1 cut(s)	1130
TfiI	GAWTC	5 cut(s)	414, 445, 605, 1475, 1592
Tru1I	TTAA	8 cut(s)	111, 477, 632, 1008, 1071, 1274, 1386, 1667
Tru9I	TTAA	8 cut(s)	111, 477, 632, 1008, 1071, 1274, 1386, 1667
TscAI	CASTG	1 cut(s)	909
TseFI	GTSAC	3 cut(s)	747, 1436, 1872
TseI	GCWGC	5 cut(s)	265, 617, 697, 842, 845
Tsp45I	GTSAC	3 cut(s)	747, 1436, 1872
TspDTI	ATGAA	8 cut(s)	92, 515, 543, 921, 1332, 1443, 1467, 1546
TspGWI	ACGGA	2 cut(s)	1785, 2025
TspRI	CASTG	1 cut(s)	909
VpaK11BI	GGWCC	2 cut(s)	538, 1166
XceI	RCATGY	6 cut(s)	140, 485, 674, 1117, 1164, 1717
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1984
XhoI	CTCGAG	3 cut(s)	1373, 1882, 1959
XmiI	GTMKAC	1 cut(s)	1483
XmnI	GAANNNNTTC	2 cut(s)	389, 773
XspI	CTAG	3 cut(s)	1143, 1596, 1632
ZrmI	AGTACT	1 cut(s)	1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.