Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001216

Physical Location & Seq

Genomic Coordinates Reverse (-)

51011714 .. 51019724

Gene Structure 8011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00256680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGTTGCCTTTGGGAAAAAGCTGAAGGACAGACAAATTGAAGAATGGCGGGGGTATTACATCAACTACAAACTTATGAAGAAAAAAGTGAAACGCTATGCTCAACAAATTAAAGAAGGAACACTAGATCGGCGCCATGTCCTAAAGGATTTTTCTATGATGCTAGATAACCAGATAGAGACGATCGTCCTTTTCCTATTGGAACAACAAGGGCTACTTGCGAGCAGGATAGCCAACCTTGGAAAACGACATGATGCTCTTCAACAGCAACCTGATTTTTCGCAGATATCTGAACTACGAGAAGCTTATAGACAAGTGGGGCAAGATCTTCTGAAGCTTCTATTTTTTGTTGAGATAAATGCTATTGGCCTGCGTAAGATACTGAAGAAGTTTGATAAACGCTTCGGCTATAGATTCACTGATTACTACGTTAAAACTCGTGCTAATCATCCTTACTCACAGCTGCAGCAAGTCTTTAAGCATGTGGGGTTAGGGGCTGTTGTGGGAGCTATCTCTCGAAATCTTCATGAACTTCAGGACCGACAAGGAAGCTACTTATCAATATATGATCAACCGTCTCTTCCTCTACAGGATCCTGTCGTTGATTCTATAAAAGCAGCTGTGGACAGGTTGACCCATTCAACAAACTTTCTCAGCTTTTTGGGACAACATGCACTCATTTTGCAAGAAGAGTTCCCTATTCCGGTTGAGGAACAAGCTGATGATCAGAGATACCATTTTAATTCTCTTCTCTTAAACTTAGCAAATACATTTCTTTATATGGTCAATACATATATCATTGTCCCAACAGCAGATGACTACTCCATAAGCCTTGGAGCTGCAGCAACAGTTTGTGGTGTTGTGATTGGAGCAATGGCTGTTGCACAGGTGTTTTCTTCAGTGTATTTTAGTGCATGGTCAAATAGATCATACTTCAAGCCTCTTATATTTAGCAGTATCGTTCTTTTTGCGGGAAATACCTTGTATGCACTGGCTTATGATCTTGATTCGATATGGGTACTTTTGATTGGTCGTCTACTTTGTGGATTGGGTTCTGCTAGAGCTGTAAACCGGCGTTATATCAGTGATTGTGTACCACTTAGAATTCGAATGCAGGCTTCAGCAGGTTTTGTTAGTGCAAGTGCCCTTGGAATGGCATGTGGTCCTGCCCTAGCTGGCTTGCTTCAAACTGATTTCAAGATTTACAAGCTTACATTCAATCAAGACACTCTGCCTGGCTGGGTTATGGCTATAGCTTGGCTTCTATACTTAGTATGGCTTTGCATTTCATTCAAAGAACCTGTACGTGAAGATGAAGAGGTTCCTGTGGAATCGACTGGAGGAAAAGCAGAAAGTGATTCACTCGAGAAAGGTCTTAAAAAACCATTACTCATCACTTCTGAAAACAATAAAGAAGATGATGATGATCCTGATATTGATGAAAGCGAAGAAGCTGTTGAGGAATCTCGCAGACCAGCTACTTCGATTGGATCAGCATATCGACTACTTACACCCTCGGTGAAGGTTCAATTATTGATATATTTCATGCTCAAGTACGCAATGGAGATTTTACTTTCAGAATCTAGTGTCATTACCACATACTATTTTAATTGGTCTACTACCTCAGTTGCAATTTTTCTTGCATCTCTTGGGCTTACCGTTCTTCCAGTTAATATATTGGTCGGAAGCTACATCAGCAACATCTTTGAAGACAGGCAAATTTTATTGGCATCTGAAATACTGGTTTTTTTAGGCATAGTTATAAGCTTCAATATAATAGTTCCATACACTGTGGCACAATATGTAGTTTCTGGACTCGTCATGTTTGTTTCGGCTGAAGTACTTGAAGGTGTGAATTTGTCACTTTTATCTAGGGTCATGTCATCGAGGCTTTCCCGTGGAACTTACAATGGTGGATTACTTTCAACAGAAGCTGGGACTCTCGCTCGAGTAATTGCAGATGGCACCATTACTCTGGCTGGGTACTTGGGGGACAGTAAACTCTTGAACGTTACATTAATTCCTTCCCTCGTCATTTGCGTTACATCCATTGTTGCTACCTGCTATACCTACAACTCTCTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0009705 GO:0015698 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 SPX

Protein Analysis

695

Amino Acids

77.71

Weight (kDa)

6.15

Isoelectric Point (pI)

39.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	99 - 146	8.6e-07	SPX domain
MFS_1	PF07690	256 - 638	3.1e-24	Major Facilitator Superfamily
Sugar_tr	PF00083	265 - 404	1.9e-06	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT4G11810 AT4G11810 AT4G11810 AT4G22990 AT4G22990 AT4G22990
fragaria_vesca	FvH4_5g01390 FvH4_7g12920 FvH4_7g12920 FvH4_7g12920
malus_domestica	MD02G1195400.v1.1 MD04G1068900.v1.1 MD06G1069900.v1.1
prunus_persica	Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1
pyrus_communis	pycom02g15930 pycom04g06270 pycom06g07090
rosa_chinensis	RchiOBHm_Chr1g0352001 RchiOBHm_Chr7g0199491
rosa_laevigata	RLG00000003789 RLG00000028368
rosa_multiflora	Rmu_sc0003549.1_g000001 Rmu_sc0004009.1_g000006 Rmu_sc0007728.1_g000012
rosa_roxburghii	Rroxscaffold_3G00256680 Rroxscaffold_4G00303360
rosa_rugosa	Rorug01G0223300 Rorug01G0223400 Rorug07G0054600 Rorug07G0054700 Rorug07G0054800 Rorug07G0054900
rosa_samantha	Rh1AG237400 Rh1BG207600 Rh1CG221800 Rh1DG234600 Rh7AG179600 Rh7BG182900 Rh7CG188200 Rh7DG182300
rosa_wichuraiana	Rw1G020650 Rw7G015770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1763
Acc36I	ACCTGC	2 cut(s)	1115, 2069
AccB1I	GGYRCC	2 cut(s)	132, 1964
AccI	GTMKAC	2 cut(s)	1036, 1616
AciI	CCGC	2 cut(s)	49, 971
AclI	AACGTT	1 cut(s)	2010
AclWI	GGATC	4 cut(s)	587, 600, 1421, 1498
AcsI	RAATTY	3 cut(s)	1104, 1719, 1855
AcuI	CTGAAG	7 cut(s)	44, 353, 404, 518, 882, 1104, 1857
AcyI	GRCGYC	1 cut(s)	133
AfaI	GTAC	6 cut(s)	1020, 1095, 1305, 1556, 1842, 1985
AfiI	CCNNNNNNNGG	2 cut(s)	703, 1153
AjnI	CCWGG	1 cut(s)	1234
Alw26I	GTCTC	2 cut(s)	173, 582
AlwI	GGATC	4 cut(s)	587, 600, 1421, 1498
AlwNI	CAGNNNCTG	1 cut(s)	1934
Ama87I	CYCGRG	2 cut(s)	1364, 1947
AoxI	GGCC	1 cut(s)	367
ApeKI	GCWGC	5 cut(s)	463, 466, 617, 839, 842
ApoI	RAATTY	3 cut(s)	1104, 1719, 1855
AseI	ATTAAT	1 cut(s)	2018
Asp700I	GAANNNNTTC	1 cut(s)	1320
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	2 cut(s)	538, 1163
AsuHPI	GGTGA	1 cut(s)	1531
AsuII	TTCGAA	1 cut(s)	1108
AvaI	CYCGRG	2 cut(s)	1364, 1947
AvaII	GGWCC	2 cut(s)	538, 1163
BaeGI	GKGCMC	1 cut(s)	1147
BamHI	GGATCC	1 cut(s)	592
BanI	GGYRCC	2 cut(s)	132, 1964
BauI	CACGAG	1 cut(s)	438
BbsI	GAAGAC	1 cut(s)	1716
BbvI	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BccI	CCATC	1 cut(s)	1955
BciT130I	CCWGG	1 cut(s)	1236
BclI	TGATCA	2 cut(s)	568, 724
BcoDI	GTCTC	2 cut(s)	173, 582
BfaI	CTAG	6 cut(s)	125, 164, 1059, 1172, 1584, 1872
BfmI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
BfoI	RGCGCY	1 cut(s)	136
BfuAI	ACCTGC	2 cut(s)	1115, 2069
BglII	AGATCT	1 cut(s)	325
BisI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
BlsI	GCNGC	5 cut(s)	465, 468, 619, 841, 844
BmcAI	AGTACT	1 cut(s)	1842
Bme1390I	CCNGG	1 cut(s)	1236
Bme18I	GGWCC	2 cut(s)	538, 1163
BmeT110I	CYCGRG	2 cut(s)	1364, 1947
BmgT120I	GGNCC	2 cut(s)	538, 1163
BmiI	GGNNCC	4 cut(s)	134, 594, 1323, 1966
BmrFI	CCNGG	1 cut(s)	1236
BmsI	GCATC	4 cut(s)	150, 244, 1652, 1739
BoxI	GACNNNNGTC	1 cut(s)	185
BpiI	GAAGAC	1 cut(s)	1716
BpmI	CTGGAG	1 cut(s)	1359
Bpu14I	TTCGAA	1 cut(s)	1108
BpuEI	CTTGAG	1 cut(s)	1535
BsaAI	YACGTR	1 cut(s)	1307
BsaBI	GATNNNNATC	1 cut(s)	1425
BsaHI	GRCGYC	1 cut(s)	133
BsaJI	CCNNGG	5 cut(s)	238, 832, 1147, 1515, 1897
BsaWI	WCCGGW	1 cut(s)	703
Bsc4I	CCNNNNNNNGG	2 cut(s)	703, 1153
Bse118I	RCCGGY	1 cut(s)	1071
Bse1I	ACTGG	4 cut(s)	996, 1342, 1667, 1746
Bse3DI	GCAATG	2 cut(s)	879, 1566
Bse8I	GATNNNNATC	1 cut(s)	1425
BseBI	CCWGG	1 cut(s)	1236
BseDI	CCNNGG	5 cut(s)	238, 832, 1147, 1515, 1897
BseGI	GGATG	2 cut(s)	448, 2045
BseJI	GATNNNNATC	1 cut(s)	1425
BseLI	CCNNNNNNNGG	2 cut(s)	703, 1153
BseMI	GCAATG	2 cut(s)	879, 1566
BseMII	CTCAG	2 cut(s)	667, 1638
BseNI	ACTGG	4 cut(s)	996, 1342, 1667, 1746
BseSI	GKGCMC	1 cut(s)	1147
BseXI	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BseYI	CCCAGC	3 cut(s)	1239, 1934, 1979
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	1 cut(s)	369
BshNI	GGYRCC	2 cut(s)	132, 1964
BsiEI	CGRYCG	1 cut(s)	186
BsiHKCI	CYCGRG	2 cut(s)	1364, 1947
BsiSI	CCGG	2 cut(s)	704, 1072
BslFI	GGGAC	4 cut(s)	678, 788, 1951, 2006
BslI	CCNNNNNNNGG	2 cut(s)	703, 1153
BsmAI	GTCTC	2 cut(s)	173, 582
BsmBI	CGTCTC	2 cut(s)	173, 582
BsmFI	GGGAC	4 cut(s)	678, 788, 1951, 2006
BsmI	GAATGC	1 cut(s)	1116
BsnI	GGCC	1 cut(s)	369
BsoBI	CYCGRG	2 cut(s)	1364, 1947
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp1286I	GDGCHC	1 cut(s)	1147
BspACI	CCGC	2 cut(s)	49, 971
BspANI	GGCC	1 cut(s)	369
BspCNI	CTCAG	2 cut(s)	666, 1637
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	4 cut(s)	134, 594, 1323, 1966
BspMAI	CTGCAG	2 cut(s)	468, 844
BspMI	ACCTGC	2 cut(s)	1115, 2069
BspPI	GGATC	4 cut(s)	587, 600, 1421, 1498
BspQI	GCTCTTC	1 cut(s)	264
BspT104I	TTCGAA	1 cut(s)	1108
BspT107I	GGYRCC	2 cut(s)	132, 1964
BsrDI	GCAATG	2 cut(s)	879, 1566
BsrFI	RCCGGY	1 cut(s)	1071
BsrI	ACTGG	4 cut(s)	996, 1342, 1667, 1746
BssAI	RCCGGY	1 cut(s)	1071
BssECI	CCNNGG	5 cut(s)	238, 832, 1147, 1515, 1897
BssNI	GRCGYC	1 cut(s)	133
BssSI	CACGAG	1 cut(s)	438
BssT1I	CCWWGG	3 cut(s)	238, 832, 1147
Bst2BI	CACGAG	1 cut(s)	438
Bst2UI	CCWGG	1 cut(s)	1236
Bst4CI	ACNGT	5 cut(s)	576, 850, 1660, 1792, 1997
Bst6I	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
BstACI	GRCGYC	1 cut(s)	133
BstBAI	YACGTR	1 cut(s)	1307
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	5 cut(s)	223, 371, 1116, 1177, 1181
BstDEI	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1624
BstDSI	CCRYGG	1 cut(s)	1897
BstF5I	GGATG	2 cut(s)	448, 2045
BstH2I	RGCGCY	1 cut(s)	136
BstHHI	GCGC	1 cut(s)	135
BstMAI	GTCTC	2 cut(s)	173, 582
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	1 cut(s)	1695
BstNI	CCWGG	1 cut(s)	1236
BstNSI	RCATGY	3 cut(s)	485, 674, 1161
BstPAI	GACNNNNGTC	1 cut(s)	185
BstSCI	CCNGG	1 cut(s)	1234
BstSFI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
BstSLI	GKGCMC	1 cut(s)	1147
BstV1I	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BstV2I	GAAGAC	1 cut(s)	1716
BstX2I	RGATCY	2 cut(s)	325, 592
BstXI	CCANNNNNNTGG	1 cut(s)	1975
BstYI	RGATCY	2 cut(s)	325, 592
BsuRI	GGCC	1 cut(s)	369
BtgI	CCRYGG	1 cut(s)	1897
BtsCI	GGATG	2 cut(s)	448, 2045
BtsIMutI	CAGTG	5 cut(s)	417, 906, 989, 1090, 1788
BveI	ACCTGC	2 cut(s)	1115, 2069
Cac8I	GCNNGC	5 cut(s)	223, 371, 1116, 1177, 1181
CaiI	CAGNNNCTG	1 cut(s)	1934
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	1 cut(s)	1071
Cfr13I	GGNCC	2 cut(s)	538, 1163
Csp6I	GTAC	6 cut(s)	1019, 1094, 1304, 1555, 1841, 1984
CviQI	GTAC	6 cut(s)	1019, 1094, 1304, 1555, 1841, 1984
DdeI	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1624
DinI	GGCGCC	1 cut(s)	134
Eam1104I	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
EarI	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
Eco130I	CCWWGG	3 cut(s)	238, 832, 1147
Eco32I	GATATC	1 cut(s)	288
Eco47I	GGWCC	2 cut(s)	538, 1163
Eco57I	CTGAAG	7 cut(s)	44, 353, 404, 518, 882, 1104, 1857
Eco88I	CYCGRG	2 cut(s)	1364, 1947
EcoRI	GAATTC	1 cut(s)	1104
EcoRII	CCWGG	1 cut(s)	1234
EcoRV	GATATC	1 cut(s)	288
EcoT14I	CCWWGG	3 cut(s)	238, 832, 1147
EgeI	GGCGCC	1 cut(s)	134
EheI	GGCGCC	1 cut(s)	134
ErhI	CCWWGG	3 cut(s)	238, 832, 1147
Esp3I	CGTCTC	2 cut(s)	173, 582
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FaqI	GGGAC	4 cut(s)	678, 788, 1951, 2006
FauI	CCCGC	2 cut(s)	42, 964
FbaI	TGATCA	2 cut(s)	568, 724
FblI	GTMKAC	2 cut(s)	1036, 1616
Fnu4HI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
FokI	GGATG	2 cut(s)	435, 2032
Fsp4HI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
FspBI	CTAG	6 cut(s)	125, 164, 1059, 1172, 1584, 1872
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
GsaI	CCCAGC	3 cut(s)	1243, 1938, 1983
GsuI	CTGGAG	1 cut(s)	1359
HaeII	RGCGCY	1 cut(s)	136
HaeIII	GGCC	1 cut(s)	369
HapII	CCGG	2 cut(s)	704, 1072
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	133
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	1 cut(s)	633
HindII	GTYRAC	1 cut(s)	633
HindIII	AAGCTT	4 cut(s)	303, 335, 1208, 1765
HinfI	GANTC	9 cut(s)	414, 605, 1007, 1331, 1358, 1463, 1580, 1815, 1939
HpaII	CCGG	2 cut(s)	704, 1072
HphI	GGTGA	1 cut(s)	1531
Hpy166II	GTNNAC	7 cut(s)	625, 633, 1037, 1069, 1094, 1617, 2000
Hpy188I	TCNGA	7 cut(s)	292, 333, 729, 1402, 1579, 1685, 1735
Hpy8I	GTNNAC	7 cut(s)	625, 633, 1037, 1069, 1094, 1617, 2000
HpyAV	CCTTC	5 cut(s)	19, 110, 1516, 1841, 2034
HpyCH4III	ACNGT	5 cut(s)	576, 850, 1660, 1792, 1997
HpyCH4IV	ACGT	3 cut(s)	429, 1306, 2010
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1695
HpyF3I	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1624
HpySE526I	ACGT	3 cut(s)	429, 1306, 2010
Hsp92I	GRCGYC	1 cut(s)	133
HspAI	GCGC	1 cut(s)	133
KasI	GGCGCC	1 cut(s)	132
Ksp22I	TGATCA	2 cut(s)	568, 724
LguI	GCTCTTC	1 cut(s)	264
LmnI	GCTCC	3 cut(s)	506, 836, 869
Lsp1109I	GCAGC	5 cut(s)	450, 478, 629, 826, 854
LweI	GCATC	4 cut(s)	150, 244, 1652, 1739
MaeI	CTAG	6 cut(s)	125, 164, 1059, 1172, 1584, 1872
MaeII	ACGT	3 cut(s)	429, 1306, 2010
MaeIII	GTNAC	3 cut(s)	1860, 2011, 2041
MflI	RGATCY	2 cut(s)	325, 592
MhlI	GDGCHC	1 cut(s)	1147
Mly113I	GGCGCC	1 cut(s)	133
MlyI	GAGTC	2 cut(s)	1809, 1933
MmeI	TCCRAC	1 cut(s)	1663
MroXI	GAANNNNTTC	1 cut(s)	1320
MseI	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1608, 1671, 2018
MspA1I	CMGCKG	2 cut(s)	463, 620
MspI	CCGG	2 cut(s)	704, 1072
MspR9I	CCNGG	1 cut(s)	1236
Mva1269I	GAATGC	1 cut(s)	1116
MvaI	CCWGG	1 cut(s)	1236
MwoI	GCNNNNNNNGC	1 cut(s)	1695
NarI	GGCGCC	1 cut(s)	133
NlaIV	GGNNCC	4 cut(s)	134, 594, 1323, 1966
NmuCI	GTSAC	1 cut(s)	1860
NspI	RCATGY	3 cut(s)	485, 674, 1161
NspV	TTCGAA	1 cut(s)	1108
PaeR7I	CTCGAG	2 cut(s)	1364, 1947
PagI	TCATGA	1 cut(s)	526
PciSI	GCTCTTC	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	1 cut(s)	2037
PctI	GAATGC	1 cut(s)	1116
PdmI	GAANNNNTTC	1 cut(s)	1320
PfeI	GAWTC	7 cut(s)	414, 605, 1007, 1331, 1358, 1463, 1580
PkrI	GCNGC	5 cut(s)	465, 468, 619, 841, 844
Ple19I	CGATCG	1 cut(s)	186
PleI	GAGTC	2 cut(s)	1809, 1933
PluTI	GGCGCC	1 cut(s)	136
PpsI	GAGTC	2 cut(s)	1809, 1933
Ppu21I	YACGTR	1 cut(s)	1307
PshAI	GACNNNNGTC	1 cut(s)	185
PshBI	ATTAAT	1 cut(s)	2018
PsiI	TTATAA	1 cut(s)	1763
Psp1406I	AACGTT	1 cut(s)	2010
Psp6I	CCWGG	1 cut(s)	1234
PspFI	CCCAGC	3 cut(s)	1239, 1934, 1979
PspGI	CCWGG	1 cut(s)	1234
PspN4I	GGNNCC	4 cut(s)	134, 594, 1323, 1966
PspPI	GGNCC	2 cut(s)	538, 1163
PspXI	VCTCGAGB	1 cut(s)	1947
PstI	CTGCAG	2 cut(s)	468, 844
PstNI	CAGNNNCTG	1 cut(s)	1934
PsuI	RGATCY	2 cut(s)	325, 592
PvuI	CGATCG	1 cut(s)	186
PvuII	CAGCTG	2 cut(s)	463, 620
RsaI	GTAC	6 cut(s)	1020, 1095, 1305, 1556, 1842, 1985
RsaNI	GTAC	6 cut(s)	1019, 1094, 1304, 1555, 1841, 1984
SapI	GCTCTTC	1 cut(s)	264
SaqAI	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1608, 1671, 2018
SatI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
Sau96I	GGNCC	2 cut(s)	538, 1163
ScaI	AGTACT	1 cut(s)	1842
SchI	GAGTC	2 cut(s)	1809, 1933
ScrFI	CCNGG	1 cut(s)	1236
SduI	GDGCHC	1 cut(s)	1147
SfaNI	GCATC	4 cut(s)	150, 244, 1652, 1739
SfcI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
SfoI	GGCGCC	1 cut(s)	134
Sfr274I	CTCGAG	2 cut(s)	1364, 1947
SfuI	TTCGAA	1 cut(s)	1108
SinI	GGWCC	2 cut(s)	538, 1163
SlaI	CTCGAG	2 cut(s)	1364, 1947
SmlI	CTYRAG	3 cut(s)	1364, 1550, 1947
SmoI	CTYRAG	3 cut(s)	1364, 1550, 1947
SsiI	CCGC	2 cut(s)	49, 971
SspDI	GGCGCC	1 cut(s)	132
SspMI	CTAG	6 cut(s)	125, 164, 1059, 1172, 1584, 1872
StyD4I	CCNGG	1 cut(s)	1234
StyI	CCWWGG	3 cut(s)	238, 832, 1147
TaaI	ACNGT	5 cut(s)	576, 850, 1660, 1792, 1997
TaiI	ACGT	3 cut(s)	432, 1309, 2013
TaqI	TCGA	9 cut(s)	517, 1010, 1108, 1334, 1365, 1484, 1501, 1886, 1948
TaqII	GACCGA	1 cut(s)	555
TatI	WGTACW	1 cut(s)	1840
TfiI	GAWTC	7 cut(s)	414, 605, 1007, 1331, 1358, 1463, 1580
Tru1I	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1608, 1671, 2018
Tru9I	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1608, 1671, 2018
TscAI	CASTG	5 cut(s)	424, 906, 996, 1090, 1795
TseFI	GTSAC	1 cut(s)	1860
TseI	GCWGC	5 cut(s)	463, 466, 617, 839, 842
Tsp45I	GTSAC	1 cut(s)	1860
TspDTI	ATGAA	7 cut(s)	92, 515, 543, 1278, 1329, 1455, 1534
TspRI	CASTG	5 cut(s)	424, 906, 996, 1090, 1795
VpaK11BI	GGWCC	2 cut(s)	538, 1163
VspI	ATTAAT	1 cut(s)	2018
XapI	RAATTY	3 cut(s)	1104, 1719, 1855
XceI	RCATGY	3 cut(s)	485, 674, 1161
XhoI	CTCGAG	2 cut(s)	1364, 1947
XmiI	GTMKAC	2 cut(s)	1036, 1616
XmnI	GAANNNNTTC	1 cut(s)	1320
XspI	CTAG	6 cut(s)	125, 164, 1059, 1172, 1584, 1872
ZrmI	AGTACT	1 cut(s)	1842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.