Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001216

Physical Location & Seq

Genomic Coordinates Forward (+)

16920484 .. 16929114

Gene Structure 8631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG182300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGTTGCCTTTGGGAAAAAGCTGAAGGACAGACAAATTGAAGAATGGCGGGGGTATTACATCAACTACAAACTTATGAAGAAAAAAGTGAAACGCTATGCTCAACAAATTAAAGAAGGAACACTAGATCGGCGCCACGTCCTAAAGGATTTTTCTATGATGCTAGATAACCAGATAGAGACGATCGTCCTTTTCCTATTGGAACAACAAGGGCTACTTGCGAGCAGGATAGCCAACTTTGGAAAACGACATGATGCTCTTCAACAGCAACCTGATATTTCCCAGATATCTGAACTACGAGAAGCTTATAGACAAGTGGGGCGAGATCTTCTGAAGCTTCTATTTTTTGTTGAGATAAATGCTATTGGCCTGCGTAAGATACTGAAGAAGTTTGATAAACGCTTCGGCTATAGATTCACTGATTACTACGTTAAAACTCGTGCTAATCATCCTTACTCACAGCTGCAGCAAGTCTTTAAGCATGTGGGGGTAGGGGCTGTTGTGGGAGCTATCTCTCGAAATCTTCATGAACTTCAGGACCGACAAGGAAGCTACTTATCAATATATGATCAACCGTCTCTTCCTCTGCAGGATCCTGTCGTTGATTCTATAAAAGCAGCTGTGGACAGGTTGACCCATTCAACGAACTTTCTCAGCTTTTTGGGACAACATGCACTCATTTTGCAAGAAGAGTTCCCTATTCCGGTTGAGGAACAAGCTGATGATCAGATATACCATTTTAATTCTCTTCTCTTAAACTTAGCAAATACATTTCTTTATATGGTCAATACATATATCATTGTCCCGACAGCAGATGACTACTCCATAAGCCTTGGAGCTGCAGCAACAGTTTGTGGTGTTGTGATTGGAGCAATGGCTGTTGCACAGGTGTTTTCTTCAGTGTATTTTAGTGCATGGTCAAATAGATCATACTTCAAGCCTCTTATATTTAGCAGTATCGTTCTTTTTGCGGGAAATACCTTGTATGCACTGGCTTATGATCTTGATTCGATATGGGTACTTTTGATTGGTCGTCTACTTTGTGGATTTGGTTCTGCTAGAGCTGTAAACCGGCGTTATATCAGTGATTGTGTACCACTTAGAATTCGAATGCAGGCTTCAGCAGGTTTTGTTAGTGCTAGTGCCCTTGGAATGGCATGCGGTCCTGCCCTAGCTGGCTTGCTTCAAACTGATTTCAAGATTTACAAGCTTACATTCAATCAAGACACTCTGCCTGGCTGGGTTATGGCTGTAGCTTGGCTTCTATACTTAGTATGGCTTTGCATTTCATTCAAAGAACCTGTACGTGAAGATGAAGAGGTTCCTGTGGAATCGACTGGAGGAAAAGCAGAAAGTGACGCACTCGAGAAAGGTCTTAAAAAACCATTACTCATCACTTCTGAAAACACTTCTGAAAACAATAAAGAAGATGAAGATGATGATCCTGATATTGATGAAAGCGAAGAAGCTGTTGAGGAATCTCGCAGACCAGCTACTTCGATTGGATCAGCATATCGACTACTTACACCCTCGGTGAAGGTTCAATTATTGATATATTTCATGCTCAAGTACGTAATGGAGATTCTACTTTCAGAATCTAGTGTTGTTACCACATACTATTTTAATTGGTCTACTAGCTCAGTTGCAATTTTTCTTGCATCTCTTGGGCTTACCGTTCTTCCAGTTAATATATTGGTCGGAAGCTACATCAGCAACATGTTTGAAGACAGGCAAATTTTATTGGCATCTGAAATACTGGTTTTTATAGGCATAGTTATAAGCTTCAATATAATAATTCCATACACTGTGGCACAGTATGTAGTTTCTGGACTCGTTGTGTTTGTTTCGGCTGAAGTACTTGAAGGTGTGAATTTGTCACTTTTATCTAGGGTCATGTCATCGAGGCTTTCCCGTGGAACTTACAATGGTGGATTACTTTCAACAGAAGCTGGGACTCTCGCTCGAGTAATTGCAGATGGCACCATTACTCTGGCTGGGTACTTGGGGGACAGTAAACTCTTGAACGTGACATTAATTCCTTCCCTCGTCATTTGCGTTACATCCATTGTTGCTACCTGCTATACCTACAACTCTCTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0009705 GO:0015698 GO:0016020 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1 SPX

Protein Analysis

700

Amino Acids

78.25

Weight (kDa)

5.9

Isoelectric Point (pI)

37.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	4 - 38	9.2e-06	SPX domain
SPX	PF03105	90 - 146	5.5e-08	SPX domain
MFS_1	PF07690	256 - 643	1.9e-24	Major Facilitator Superfamily
Sugar_tr	PF00083	265 - 403	3.3e-06	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT1G63010 AT4G11810 AT4G11810 AT4G11810 AT4G22990 AT4G22990 AT4G22990
fragaria_vesca	FvH4_5g01390 FvH4_7g12920 FvH4_7g12920 FvH4_7g12920
malus_domestica	MD02G1195400.v1.1 MD04G1068900.v1.1 MD06G1069900.v1.1
prunus_persica	Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.2G153100_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1 Prupe.5G089200_v2.0.a1
pyrus_communis	pycom02g15930 pycom04g06270 pycom06g07090
rosa_chinensis	RchiOBHm_Chr1g0352001 RchiOBHm_Chr7g0199491
rosa_laevigata	RLG00000003789 RLG00000028368
rosa_multiflora	Rmu_sc0003549.1_g000001 Rmu_sc0004009.1_g000006 Rmu_sc0007728.1_g000012
rosa_roxburghii	Rroxscaffold_3G00256680 Rroxscaffold_4G00303360
rosa_rugosa	Rorug01G0223300 Rorug01G0223400 Rorug07G0054600 Rorug07G0054700 Rorug07G0054800 Rorug07G0054900
rosa_samantha	Rh1AG237400 Rh1BG207600 Rh1CG221800 Rh1DG234600 Rh7AG179600 Rh7BG182900 Rh7CG188200 Rh7DG182300
rosa_wichuraiana	Rw1G020650 Rw7G015770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1778
Acc36I	ACCTGC	2 cut(s)	1115, 2084
AccB1I	GGYRCC	2 cut(s)	132, 1979
AccI	GTMKAC	2 cut(s)	1036, 1631
AciI	CCGC	3 cut(s)	49, 971, 1161
AclWI	GGATC	4 cut(s)	587, 600, 1436, 1513
AcsI	RAATTY	3 cut(s)	1104, 1734, 1870
AcuI	CTGAAG	7 cut(s)	44, 353, 404, 518, 882, 1104, 1872
AcyI	GRCGYC	1 cut(s)	133
AfaI	GTAC	6 cut(s)	1020, 1095, 1305, 1571, 1857, 2000
AfiI	CCNNNNNNNGG	2 cut(s)	703, 1153
AflIII	ACRYGT	1 cut(s)	1716
AjiI	CACGTC	1 cut(s)	139
AjnI	CCWGG	1 cut(s)	1234
Alw26I	GTCTC	2 cut(s)	173, 582
AlwI	GGATC	4 cut(s)	587, 600, 1436, 1513
AlwNI	CAGNNNCTG	1 cut(s)	1949
Ama87I	CYCGRG	2 cut(s)	1364, 1962
AoxI	GGCC	1 cut(s)	367
ApeKI	GCWGC	5 cut(s)	463, 466, 617, 839, 842
ApoI	RAATTY	3 cut(s)	1104, 1734, 1870
AseI	ATTAAT	1 cut(s)	2033
Asp700I	GAANNNNTTC	1 cut(s)	1320
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	2 cut(s)	538, 1163
AsuHPI	GGTGA	1 cut(s)	1546
AsuII	TTCGAA	1 cut(s)	1108
AvaI	CYCGRG	2 cut(s)	1364, 1962
AvaII	GGWCC	2 cut(s)	538, 1163
BaeGI	GKGCMC	1 cut(s)	1147
BamHI	GGATCC	1 cut(s)	592
BanI	GGYRCC	2 cut(s)	132, 1979
BarI	GAAGNNNNNNTAC	2 cut(s)	1245, 1277
BauI	CACGAG	1 cut(s)	438
BbsI	GAAGAC	1 cut(s)	1731
BbvI	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BccI	CCATC	1 cut(s)	1970
BciT130I	CCWGG	1 cut(s)	1236
BclI	TGATCA	2 cut(s)	568, 724
BcoDI	GTCTC	2 cut(s)	173, 582
BfaI	CTAG	8 cut(s)	125, 164, 1059, 1140, 1172, 1599, 1635, 1887
BfmI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
BfoI	RGCGCY	1 cut(s)	136
BfuAI	ACCTGC	2 cut(s)	1115, 2084
BglII	AGATCT	1 cut(s)	325
BisI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
BlsI	GCNGC	5 cut(s)	465, 468, 619, 841, 844
BmcAI	AGTACT	1 cut(s)	1857
Bme1390I	CCNGG	1 cut(s)	1236
Bme18I	GGWCC	2 cut(s)	538, 1163
BmeT110I	CYCGRG	2 cut(s)	1364, 1962
BmgBI	CACGTC	1 cut(s)	139
BmgT120I	GGNCC	2 cut(s)	538, 1163
BmiI	GGNNCC	4 cut(s)	134, 594, 1323, 1981
BmrFI	CCNGG	1 cut(s)	1236
BmsI	GCATC	4 cut(s)	150, 244, 1667, 1754
BoxI	GACNNNNGTC	1 cut(s)	185
BpiI	GAAGAC	1 cut(s)	1731
BpmI	CTGGAG	1 cut(s)	1359
Bpu14I	TTCGAA	1 cut(s)	1108
BpuEI	CTTGAG	1 cut(s)	1550
BsaAI	YACGTR	2 cut(s)	1307, 1573
BsaBI	GATNNNNATC	1 cut(s)	1440
BsaHI	GRCGYC	1 cut(s)	133
BsaJI	CCNNGG	4 cut(s)	832, 1147, 1530, 1912
BsaWI	WCCGGW	1 cut(s)	703
Bsc4I	CCNNNNNNNGG	2 cut(s)	703, 1153
Bse118I	RCCGGY	1 cut(s)	1071
Bse1I	ACTGG	4 cut(s)	996, 1342, 1682, 1761
Bse3DI	GCAATG	1 cut(s)	879
Bse8I	GATNNNNATC	1 cut(s)	1440
BseBI	CCWGG	1 cut(s)	1236
BseDI	CCNNGG	4 cut(s)	832, 1147, 1530, 1912
BseGI	GGATG	2 cut(s)	448, 2060
BseJI	GATNNNNATC	1 cut(s)	1440
BseLI	CCNNNNNNNGG	2 cut(s)	703, 1153
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	2 cut(s)	667, 1653
BseNI	ACTGG	4 cut(s)	996, 1342, 1682, 1761
BseSI	GKGCMC	1 cut(s)	1147
BseXI	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BseYI	CCCAGC	3 cut(s)	1239, 1949, 1994
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	1 cut(s)	369
BshNI	GGYRCC	2 cut(s)	132, 1979
BsiEI	CGRYCG	1 cut(s)	186
BsiHKCI	CYCGRG	2 cut(s)	1364, 1962
BsiSI	CCGG	2 cut(s)	704, 1072
BslFI	GGGAC	4 cut(s)	678, 788, 1966, 2021
BslI	CCNNNNNNNGG	2 cut(s)	703, 1153
BsmAI	GTCTC	2 cut(s)	173, 582
BsmBI	CGTCTC	2 cut(s)	173, 582
BsmFI	GGGAC	4 cut(s)	678, 788, 1966, 2021
BsmI	GAATGC	1 cut(s)	1116
BsnI	GGCC	1 cut(s)	369
BsoBI	CYCGRG	2 cut(s)	1364, 1962
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp1286I	GDGCHC	1 cut(s)	1147
BspACI	CCGC	3 cut(s)	49, 971, 1161
BspANI	GGCC	1 cut(s)	369
BspCNI	CTCAG	2 cut(s)	666, 1652
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	4 cut(s)	134, 594, 1323, 1981
BspMAI	CTGCAG	3 cut(s)	468, 591, 844
BspMI	ACCTGC	2 cut(s)	1115, 2084
BspPI	GGATC	4 cut(s)	587, 600, 1436, 1513
BspQI	GCTCTTC	1 cut(s)	264
BspT104I	TTCGAA	1 cut(s)	1108
BspT107I	GGYRCC	2 cut(s)	132, 1979
BsrDI	GCAATG	1 cut(s)	879
BsrFI	RCCGGY	1 cut(s)	1071
BsrI	ACTGG	4 cut(s)	996, 1342, 1682, 1761
BssAI	RCCGGY	1 cut(s)	1071
BssECI	CCNNGG	4 cut(s)	832, 1147, 1530, 1912
BssNI	GRCGYC	1 cut(s)	133
BssSI	CACGAG	1 cut(s)	438
BssT1I	CCWWGG	2 cut(s)	832, 1147
Bst2BI	CACGAG	1 cut(s)	438
Bst2UI	CCWGG	1 cut(s)	1236
Bst4CI	ACNGT	6 cut(s)	576, 850, 1675, 1807, 1815, 2012
Bst6I	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
BstACI	GRCGYC	1 cut(s)	133
BstBAI	YACGTR	2 cut(s)	1307, 1573
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	6 cut(s)	223, 371, 1116, 1159, 1177, 1181
BstDEI	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1639
BstDSI	CCRYGG	1 cut(s)	1912
BstF5I	GGATG	2 cut(s)	448, 2060
BstH2I	RGCGCY	1 cut(s)	136
BstHHI	GCGC	1 cut(s)	135
BstMAI	GTCTC	2 cut(s)	173, 582
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	1 cut(s)	1710
BstNI	CCWGG	1 cut(s)	1236
BstNSI	RCATGY	4 cut(s)	485, 674, 1161, 1720
BstPAI	GACNNNNGTC	1 cut(s)	185
BstSCI	CCNGG	1 cut(s)	1234
BstSFI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
BstSLI	GKGCMC	1 cut(s)	1147
BstSNI	TACGTA	1 cut(s)	1573
BstV1I	GCAGC	5 cut(s)	450, 478, 629, 826, 854
BstV2I	GAAGAC	1 cut(s)	1731
BstX2I	RGATCY	2 cut(s)	325, 592
BstXI	CCANNNNNNTGG	1 cut(s)	1990
BstYI	RGATCY	2 cut(s)	325, 592
BsuRI	GGCC	1 cut(s)	369
BtgI	CCRYGG	1 cut(s)	1912
BtrI	CACGTC	1 cut(s)	139
BtsCI	GGATG	2 cut(s)	448, 2060
BtsIMutI	CAGTG	5 cut(s)	417, 906, 989, 1090, 1803
BveI	ACCTGC	2 cut(s)	1115, 2084
Cac8I	GCNNGC	6 cut(s)	223, 371, 1116, 1159, 1177, 1181
CaiI	CAGNNNCTG	1 cut(s)	1949
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	1 cut(s)	1071
Cfr13I	GGNCC	2 cut(s)	538, 1163
CseI	GACGC	1 cut(s)	1367
Csp6I	GTAC	6 cut(s)	1019, 1094, 1304, 1570, 1856, 1999
CviAII	CATG	9 cut(s)	251, 482, 527, 671, 915, 1158, 1561, 1717, 1894
CviQI	GTAC	6 cut(s)	1019, 1094, 1304, 1570, 1856, 1999
DdeI	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1639
DinI	GGCGCC	1 cut(s)	134
Eam1104I	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
EarI	CTCTTC	5 cut(s)	264, 585, 684, 753, 1311
Eco105I	TACGTA	1 cut(s)	1573
Eco130I	CCWWGG	2 cut(s)	832, 1147
Eco32I	GATATC	1 cut(s)	288
Eco47I	GGWCC	2 cut(s)	538, 1163
Eco57I	CTGAAG	7 cut(s)	44, 353, 404, 518, 882, 1104, 1872
Eco88I	CYCGRG	2 cut(s)	1364, 1962
EcoRI	GAATTC	1 cut(s)	1104
EcoRII	CCWGG	1 cut(s)	1234
EcoRV	GATATC	1 cut(s)	288
EcoT14I	CCWWGG	2 cut(s)	832, 1147
EgeI	GGCGCC	1 cut(s)	134
EheI	GGCGCC	1 cut(s)	134
ErhI	CCWWGG	2 cut(s)	832, 1147
Esp3I	CGTCTC	2 cut(s)	173, 582
FaeI	CATG	9 cut(s)	254, 485, 530, 674, 918, 1161, 1564, 1720, 1897
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FaqI	GGGAC	4 cut(s)	678, 788, 1966, 2021
FatI	CATG	9 cut(s)	250, 481, 526, 670, 914, 1157, 1560, 1716, 1893
FauI	CCCGC	2 cut(s)	42, 964
FbaI	TGATCA	2 cut(s)	568, 724
FblI	GTMKAC	2 cut(s)	1036, 1631
Fnu4HI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
FokI	GGATG	2 cut(s)	435, 2047
Fsp4HI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
FspBI	CTAG	8 cut(s)	125, 164, 1059, 1140, 1172, 1599, 1635, 1887
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
GsaI	CCCAGC	3 cut(s)	1243, 1953, 1998
GsuI	CTGGAG	1 cut(s)	1359
HaeII	RGCGCY	1 cut(s)	136
HaeIII	GGCC	1 cut(s)	369
HapII	CCGG	2 cut(s)	704, 1072
HgaI	GACGC	1 cut(s)	1367
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	133
Hin1II	CATG	9 cut(s)	254, 485, 530, 674, 918, 1161, 1564, 1720, 1897
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	1 cut(s)	633
HindII	GTYRAC	1 cut(s)	633
HindIII	AAGCTT	4 cut(s)	303, 335, 1208, 1780
HinfI	GANTC	9 cut(s)	414, 605, 1007, 1331, 1478, 1582, 1595, 1830, 1954
HpaII	CCGG	2 cut(s)	704, 1072
HphI	GGTGA	1 cut(s)	1546
Hpy166II	GTNNAC	7 cut(s)	625, 633, 1037, 1069, 1094, 1632, 2015
Hpy188I	TCNGA	8 cut(s)	292, 333, 729, 1402, 1414, 1594, 1700, 1750
Hpy8I	GTNNAC	7 cut(s)	625, 633, 1037, 1069, 1094, 1632, 2015
HpyAV	CCTTC	5 cut(s)	19, 110, 1531, 1856, 2049
HpyCH4III	ACNGT	6 cut(s)	576, 850, 1675, 1807, 1815, 2012
HpyCH4IV	ACGT	5 cut(s)	138, 429, 1306, 1572, 2025
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1710
HpyF3I	CTNAG	5 cut(s)	653, 760, 1100, 1270, 1639
HpySE526I	ACGT	5 cut(s)	138, 429, 1306, 1572, 2025
Hsp92I	GRCGYC	1 cut(s)	133
Hsp92II	CATG	9 cut(s)	254, 485, 530, 674, 918, 1161, 1564, 1720, 1897
HspAI	GCGC	1 cut(s)	133
KasI	GGCGCC	1 cut(s)	132
Ksp22I	TGATCA	2 cut(s)	568, 724
LguI	GCTCTTC	1 cut(s)	264
LmnI	GCTCC	3 cut(s)	506, 836, 869
Lsp1109I	GCAGC	5 cut(s)	450, 478, 629, 826, 854
LweI	GCATC	4 cut(s)	150, 244, 1667, 1754
MaeI	CTAG	8 cut(s)	125, 164, 1059, 1140, 1172, 1599, 1635, 1887
MaeII	ACGT	5 cut(s)	138, 429, 1306, 1572, 2025
MaeIII	GTNAC	5 cut(s)	1355, 1606, 1875, 2026, 2056
MflI	RGATCY	2 cut(s)	325, 592
MhlI	GDGCHC	1 cut(s)	1147
Mly113I	GGCGCC	1 cut(s)	133
MlyI	GAGTC	2 cut(s)	1824, 1948
MmeI	TCCRAC	1 cut(s)	1678
MnlI	CCTC	9 cut(s)	594, 703, 951, 1312, 1334, 1468, 1540, 1896, 2054
MroXI	GAANNNNTTC	1 cut(s)	1320
MseI	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1623, 1686, 2033
MspA1I	CMGCKG	2 cut(s)	463, 620
MspI	CCGG	2 cut(s)	704, 1072
MspR9I	CCNGG	1 cut(s)	1236
Mva1269I	GAATGC	1 cut(s)	1116
MvaI	CCWGG	1 cut(s)	1236
MwoI	GCNNNNNNNGC	1 cut(s)	1710
NarI	GGCGCC	1 cut(s)	133
NlaIII	CATG	9 cut(s)	254, 485, 530, 674, 918, 1161, 1564, 1720, 1897
NlaIV	GGNNCC	4 cut(s)	134, 594, 1323, 1981
NmuCI	GTSAC	3 cut(s)	1355, 1875, 2026
NspI	RCATGY	4 cut(s)	485, 674, 1161, 1720
NspV	TTCGAA	1 cut(s)	1108
PaeI	GCATGC	1 cut(s)	1161
PaeR7I	CTCGAG	2 cut(s)	1364, 1962
PagI	TCATGA	1 cut(s)	526
PciI	ACATGT	1 cut(s)	1716
PciSI	GCTCTTC	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	1 cut(s)	2052
PctI	GAATGC	1 cut(s)	1116
PdmI	GAANNNNTTC	1 cut(s)	1320
PfeI	GAWTC	7 cut(s)	414, 605, 1007, 1331, 1478, 1582, 1595
PkrI	GCNGC	5 cut(s)	465, 468, 619, 841, 844
Ple19I	CGATCG	1 cut(s)	186
PleI	GAGTC	2 cut(s)	1824, 1948
PluTI	GGCGCC	1 cut(s)	136
PpsI	GAGTC	2 cut(s)	1824, 1948
Ppu21I	YACGTR	2 cut(s)	1307, 1573
PscI	ACATGT	1 cut(s)	1716
PshAI	GACNNNNGTC	1 cut(s)	185
PshBI	ATTAAT	1 cut(s)	2033
PsiI	TTATAA	1 cut(s)	1778
Psp6I	CCWGG	1 cut(s)	1234
PspFI	CCCAGC	3 cut(s)	1239, 1949, 1994
PspGI	CCWGG	1 cut(s)	1234
PspN4I	GGNNCC	4 cut(s)	134, 594, 1323, 1981
PspPI	GGNCC	2 cut(s)	538, 1163
PspXI	VCTCGAGB	1 cut(s)	1962
PstI	CTGCAG	3 cut(s)	468, 591, 844
PstNI	CAGNNNCTG	1 cut(s)	1949
PsuI	RGATCY	2 cut(s)	325, 592
PvuI	CGATCG	1 cut(s)	186
PvuII	CAGCTG	2 cut(s)	463, 620
RsaI	GTAC	6 cut(s)	1020, 1095, 1305, 1571, 1857, 2000
RsaNI	GTAC	6 cut(s)	1019, 1094, 1304, 1570, 1856, 1999
SapI	GCTCTTC	1 cut(s)	264
SaqAI	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1623, 1686, 2033
SatI	GCNGC	5 cut(s)	464, 467, 618, 840, 843
Sau96I	GGNCC	2 cut(s)	538, 1163
ScaI	AGTACT	1 cut(s)	1857
SchI	GAGTC	2 cut(s)	1824, 1948
ScrFI	CCNGG	1 cut(s)	1236
SduI	GDGCHC	1 cut(s)	1147
SfaNI	GCATC	4 cut(s)	150, 244, 1667, 1754
SfcI	CTRYAG	5 cut(s)	409, 464, 587, 840, 1251
SfoI	GGCGCC	1 cut(s)	134
Sfr274I	CTCGAG	2 cut(s)	1364, 1962
SfuI	TTCGAA	1 cut(s)	1108
SinI	GGWCC	2 cut(s)	538, 1163
SlaI	CTCGAG	2 cut(s)	1364, 1962
SmlI	CTYRAG	3 cut(s)	1364, 1565, 1962
SmoI	CTYRAG	3 cut(s)	1364, 1565, 1962
SnaBI	TACGTA	1 cut(s)	1573
SphI	GCATGC	1 cut(s)	1161
SsiI	CCGC	3 cut(s)	49, 971, 1161
SspDI	GGCGCC	1 cut(s)	132
SspMI	CTAG	8 cut(s)	125, 164, 1059, 1140, 1172, 1599, 1635, 1887
StyD4I	CCNGG	1 cut(s)	1234
StyI	CCWWGG	2 cut(s)	832, 1147
TaaI	ACNGT	6 cut(s)	576, 850, 1675, 1807, 1815, 2012
TaiI	ACGT	5 cut(s)	141, 432, 1309, 1575, 2028
TaqI	TCGA	9 cut(s)	517, 1010, 1108, 1334, 1365, 1499, 1516, 1901, 1963
TaqII	GACCGA	1 cut(s)	555
TatI	WGTACW	1 cut(s)	1855
TfiI	GAWTC	7 cut(s)	414, 605, 1007, 1331, 1478, 1582, 1595
Tru1I	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1623, 1686, 2033
Tru9I	TTAA	9 cut(s)	111, 432, 477, 741, 755, 1377, 1623, 1686, 2033
TscAI	CASTG	5 cut(s)	424, 906, 996, 1090, 1810
TseFI	GTSAC	3 cut(s)	1355, 1875, 2026
TseI	GCWGC	5 cut(s)	463, 466, 617, 839, 842
Tsp45I	GTSAC	3 cut(s)	1355, 1875, 2026
TspDTI	ATGAA	8 cut(s)	92, 515, 543, 1278, 1329, 1446, 1470, 1549
TspRI	CASTG	5 cut(s)	424, 906, 996, 1090, 1810
VpaK11BI	GGWCC	2 cut(s)	538, 1163
VspI	ATTAAT	1 cut(s)	2033
XapI	RAATTY	3 cut(s)	1104, 1734, 1870
XceI	RCATGY	4 cut(s)	485, 674, 1161, 1720
XhoI	CTCGAG	2 cut(s)	1364, 1962
XmiI	GTMKAC	2 cut(s)	1036, 1631
XmnI	GAANNNNTTC	1 cut(s)	1320
XspI	CTAG	8 cut(s)	125, 164, 1059, 1140, 1172, 1599, 1635, 1887
ZrmI	AGTACT	1 cut(s)	1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.