pycom06g15100

UBA-like domain (DUF1421)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0013667
Physical Location & Seq
Reverse (-)
19705245 .. 19708003
2759 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1890 bp
ATGATTTATGTATCTTTAGAATTCTCACAAAGAGAATCCGGATTCCATAACTTGTTTCACAATTCTCTTAAACTTTCGTTTGGGCTTTACCCACCCGCAATCCAACCCAAAAGAGAAAGGAAACATATCAAGAACAGTGGAGGAATCAGCCTCTGCGGCTCCGCTTCAAACGTCGGTCATTCCTCCGTAGGCATCTCCGTCGGGCCACTAAGCACTACACAATCAGCTGTTTGGATTCTCAGAAAACATGACGGAAAGCACCGGAAAATCTCGGAGAAAATTCCTAGCACGATGAAGACGACGGAGTTCATGGATAAGCAGATCATGGAACTCTCTCGGTCCCACTCCGAGGATTTCTCTCAACTTTCTTACCCTCAACAATTCGATAACGACGGCAAGGACGACTCCGACTCCGACTCCGTTTCCAGCTTTCAGTTCCGCCCCGCACGACGTGTCGCCTCGCAGGAGCCGCGCATTACCGCTCTCGAGAGTGGCAGTTCTATGGACTACCTTAACCTTGCAAAACCTGGAAGCAAGTATGCTGTCAGGGCTTGCGAGGATTCGCCATTGATTTCGGTGATTGAGGGAAAGATGAACCAGCATTTTGGCAGTCTATTGCATGCGGTTGAGGGTCTCAGTGCACGAATTTCCCAGCTGGAGACTCGATTACGCCGGCTGGAGAATTCTGTTGACGACTTCAAGGATTCTACTGAAATCAACCATGGGAAGGCTGATGGGAAACTGAGGCGGCTAGAGAATATGCTAAAAGAGGTTGACAGTGGTATGCAGAATTTGAGAGATAAACAAGAGATAGCAGAGGCTCGGTTGGAGCTTGCAAAGCTTCAAATGTTAAAGGGTCAGCAGCAATCGGAAAACCAAGCGAGCAATGTACAAAAAGTTTCATCTCCAGGAGTACGATCATCCGCTCCTCAGCAAAGCTACCAACTGCATTCAGCTCAGGCCCCCACCCTACAAGTTCCTTCTCTTCCTGCTAATGATCCCGGAACTCTACCTCATCAGAATTTTCCTCCAGCACCTACAGCACAGGTCCAGGTCCCCACGCAGTCACCTCAGAGTCAAATCCCATCTATTCAACATGCAGATTCTAACTACTCACCACCTGTGCCAAATCCGCAGCCCACACCTCAGATGTACTACAGCCCTCAAGTACAGCATTCGCAACCGCCACCCACTGCACCGTATCAACTTTTTCCATCAGCACCACATCCTTCACTAACCTCACAATCGCAGCAGCTGCCTCAACAACACCCACCCTTCAATGCTGCTGATCCCCAAGCCCAGTTTTCGTTGGTTCATAATCCTGGAGAAACCTCCATGCCATCTCAAAGATATCCTCCAAGCTTCCACAACACCTCTAATGCACCTGGCTTGGCTCTCCCACCCCAACAACAGCAGTATGCAGGTTCCATTCAATATACGCATGATCAAACCGCAAGCAATCACTACCTGGAGTTCCCCCCTGGGCATGTGCAACCAGTTCAAAATTCACGTTTTGATGATTTTCGTTCCCACGCTGGATCTTCATCTCACGACAGCGGTTCAAACATGAAACATTCGCAAGTCACGCCAGCCTCTTTAGACCGTTCTGGTGGAAGCAGCTTTTCGAAACTGCCAACTGCCAAGGTATTGCCACACGCAATACCCATGGCTGCGAGCGTGGATAAGGAATCGAGTTCCAGTGGGACTGGAAACAGAATACCGATTGATAATGTCATTGATAAGGTTGTCGCGATGGGATTCCGGAGGGACATGGTCCGAGCAACAGTGAGGAAAATGACCGAGAATGGGCAGTCGGTGGACGTTAATGTTGTGCTGGATAAGCTGATGAACAATGGAGAACAGCCTCAAAGTGGTGGATTTGGACGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1421

Protein Analysis

630

Amino Acids

68.99

Weight (kDa)

8.3

Isoelectric Point (pI)

62.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1421 PF07223 575 - 619 9.6e-20 UBA-like domain (DUF1421)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013667)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g05870 FvH4_5g05870
malus_domestica MD06G1169700.v1.1 MD14G1175200.v1.1
prunus_persica Prupe.5G168500_v2.0.a1
pyrus_communis pycom06g15100 pycom14g14620
rosa_chinensis RchiOBHm_Chr7g0192951
rosa_laevigata RLG00000004309
rosa_multiflora Rmu_sc0002040.1_g000061
rosa_roxburghii Rroxscaffold_3G00262510
rosa_rugosa Rorug07G0006400 Rorug07G0294800
rosa_samantha Rh7AG131600 Rh7BG132500 Rh7CG135700 Rh7DG133600
rosa_wichuraiana Rw7G011230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1412
AccBSI CCGCTC 2 cut(s) 482, 926
AccII CGCG 2 cut(s) 472, 1751
AccIII TCCGGA 2 cut(s) 38, 1761
AclWI GGATC 3 cut(s) 992, 1283, 1546
AcsI RAATTY 7 cut(s) 20, 279, 645, 682, 790, 1021, 1504
AdeI CACNNNGTG 1 cut(s) 452
AfaI GTAC 4 cut(s) 891, 915, 1154, 1170
AfiI CCNNNNNNNGG 4 cut(s) 349, 727, 1806, 1871
AflIII ACRYGT 1 cut(s) 451
AgsI TTSAA 8 cut(s) 168, 700, 845, 1094, 1279, 1433, 1502, 1563
AjiI CACGTC 1 cut(s) 452
AjnI CCWGG 7 cut(s) 526, 907, 1050, 1321, 1384, 1467, 1480
Alw21I GWGCWC 1 cut(s) 643
Alw26I GTCTC 2 cut(s) 638, 653
Alw44I GTGCAC 1 cut(s) 639
AlwI GGATC 3 cut(s) 992, 1283, 1546
AlwNI CAGNNNCTG 2 cut(s) 153, 1255
Ama87I CYCGRG 1 cut(s) 485
Aor13HI TCCGGA 2 cut(s) 38, 1761
AoxI GGCC 2 cut(s) 203, 960
ApaLI GTGCAC 1 cut(s) 639
ApeKI GCWGC 8 cut(s) 862, 1135, 1249, 1252, 1255, 1283, 1617, 1670
ApoI RAATTY 7 cut(s) 20, 279, 645, 682, 790, 1021, 1504
AspLEI GCGC 1 cut(s) 474
AspS9I GGNCC 6 cut(s) 203, 339, 961, 1048, 1054, 1774
AsuC2I CCSGG 1 cut(s) 1002
AsuHPI GGTGA 3 cut(s) 589, 1059, 1107
AsuII TTCGAA 1 cut(s) 1625
AvaI CYCGRG 1 cut(s) 485
AvaII GGWCC 4 cut(s) 339, 1048, 1054, 1774
BaeGI GKGCMC 1 cut(s) 643
BbsI GAAGAC 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 643
BbvCI CCTCAGC 1 cut(s) 930
BbvI GCAGC 8 cut(s) 874, 1147, 1242, 1261, 1264, 1270, 1629, 1657
BccI CCATC 5 cut(s) 728, 1093, 1222, 1348, 1747
BceAI ACGGC 1 cut(s) 409
BcgI CGANNNNNNTGC 2 cut(s) 181, 215
BciT130I CCWGG 7 cut(s) 528, 909, 1052, 1323, 1386, 1469, 1482
BclI TGATCA 1 cut(s) 1444
BcnI CCSGG 1 cut(s) 1002
BcoDI GTCTC 2 cut(s) 638, 653
BfaI CTAG 2 cut(s) 285, 752
BfmI CTRYAG 2 cut(s) 1038, 1156
BfuAI ACCTGC 1 cut(s) 1412
BglI GCCNNNNNGGC 1 cut(s) 156
Bme1390I CCNGG 8 cut(s) 528, 909, 1002, 1052, 1323, 1386, 1469, 1482
Bme18I GGWCC 4 cut(s) 339, 1048, 1054, 1774
BmeT110I CYCGRG 1 cut(s) 485
BmgBI CACGTC 1 cut(s) 452
BmgT120I GGNCC 6 cut(s) 203, 339, 961, 1048, 1054, 1774
BmiI GGNNCC 6 cut(s) 160, 341, 468, 963, 1056, 1426
BmrFI CCNGG 8 cut(s) 528, 909, 1002, 1052, 1323, 1386, 1469, 1482
BmrI ACTGGG 1 cut(s) 1294
BmsI GCATC 1 cut(s) 201
BmuI ACTGGG 1 cut(s) 1294
BpiI GAAGAC 1 cut(s) 302
BplI GAGNNNNNCTC 2 cut(s) 341, 373
BpmI CTGGAG 6 cut(s) 677, 698, 891, 1014, 1344, 1490
Bpu10I CCTNAGC 2 cut(s) 930, 957
Bpu14I TTCGAA 1 cut(s) 1625
BpuEI CTTGAG 1 cut(s) 1149
BpuMI CCSGG 1 cut(s) 1002
BsaBI GATNNNNATC 1 cut(s) 1543
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 6 cut(s) 348, 721, 1480, 1481, 1641, 1665
BsaWI WCCGGW 3 cut(s) 38, 261, 1761
BsaXI ACNNNNNCTCC 4 cut(s) 395, 401, 425, 431
Bsc4I CCNNNNNNNGG 4 cut(s) 349, 727, 1806, 1871
Bse118I RCCGGY 1 cut(s) 672
Bse1I ACTGG 4 cut(s) 1300, 1496, 1698, 1711
Bse3DI GCAATG 1 cut(s) 892
Bse8I GATNNNNATC 1 cut(s) 1543
BseAI TCCGGA 2 cut(s) 38, 1761
BseBI CCWGG 7 cut(s) 528, 909, 1052, 1323, 1386, 1469, 1482
BseDI CCNNGG 6 cut(s) 348, 721, 1480, 1481, 1641, 1665
BseGI GGATG 2 cut(s) 920, 1225
BseJI GATNNNNATC 1 cut(s) 1543
BseLI CCNNNNNNNGG 4 cut(s) 349, 727, 1806, 1871
BseMI GCAATG 1 cut(s) 892
BseMII CTCAG 7 cut(s) 253, 649, 734, 944, 971, 1085, 1160
BseNI ACTGG 4 cut(s) 1300, 1496, 1698, 1711
BseRI GAGGAG 1 cut(s) 918
BseSI GKGCMC 1 cut(s) 643
BseXI GCAGC 8 cut(s) 874, 1147, 1242, 1261, 1264, 1270, 1629, 1657
BseYI CCCAGC 1 cut(s) 651
BsgI GTGCAG 1 cut(s) 1179
Bsh1236I CGCG 2 cut(s) 472, 1751
BshFI GGCC 2 cut(s) 205, 962
BsiHKAI GWGCWC 1 cut(s) 643
BsiHKCI CYCGRG 1 cut(s) 485
BsiSI CCGG 5 cut(s) 39, 262, 673, 1002, 1762
BslFI GGGAC 4 cut(s) 325, 1040, 1717, 1781
BslI CCNNNNNNNGG 4 cut(s) 349, 727, 1806, 1871
BsmAI GTCTC 2 cut(s) 638, 653
BsmFI GGGAC 4 cut(s) 325, 1040, 1717, 1781
BsmI GAATGC 2 cut(s) 949, 1174
BsnI GGCC 2 cut(s) 205, 962
Bso31I GGTCTC 1 cut(s) 638
BsoBI CYCGRG 1 cut(s) 485
Bsp119I TTCGAA 1 cut(s) 1625
Bsp1286I GDGCHC 1 cut(s) 643
Bsp13I TCCGGA 2 cut(s) 38, 1761
Bsp1407I TGTACA 1 cut(s) 889
Bsp143I GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
Bsp19I CCATGG 2 cut(s) 721, 1665
Bsp68I TCGCGA 1 cut(s) 1751
BspANI GGCC 2 cut(s) 205, 962
BspCNI CTCAG 7 cut(s) 252, 648, 735, 943, 970, 1084, 1159
BspEI TCCGGA 2 cut(s) 38, 1761
BspFNI CGCG 2 cut(s) 472, 1751
BspLI GGNNCC 6 cut(s) 160, 341, 468, 963, 1056, 1426
BspMI ACCTGC 1 cut(s) 1412
BspPI GGATC 3 cut(s) 992, 1283, 1546
BspT104I TTCGAA 1 cut(s) 1625
BspTNI GGTCTC 1 cut(s) 638
BsrBI CCGCTC 2 cut(s) 482, 926
BsrDI GCAATG 1 cut(s) 892
BsrFI RCCGGY 1 cut(s) 672
BsrGI TGTACA 1 cut(s) 889
BsrI ACTGG 4 cut(s) 1300, 1496, 1698, 1711
BssAI RCCGGY 1 cut(s) 672
BssECI CCNNGG 6 cut(s) 348, 721, 1480, 1481, 1641, 1665
BssMI GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
BssT1I CCWWGG 3 cut(s) 721, 1641, 1665
Bst2UI CCWGG 7 cut(s) 528, 909, 1052, 1323, 1386, 1469, 1482
Bst4CI ACNGT 6 cut(s) 137, 779, 1200, 1604, 1786, 1887
Bst6I CTCTTC 1 cut(s) 990
BstAPI GCANNNNNTGC 1 cut(s) 1255
BstAUI TGTACA 1 cut(s) 889
BstBI TTCGAA 1 cut(s) 1625
BstC8I GCNNGC 8 cut(s) 553, 621, 674, 834, 883, 1456, 1590, 1675
BstDEI CTNAG 8 cut(s) 209, 239, 635, 743, 930, 957, 1071, 1146
BstDSI CCRYGG 2 cut(s) 721, 1665
BstF5I GGATG 2 cut(s) 920, 1225
BstFNI CGCG 2 cut(s) 472, 1751
BstHHI GCGC 1 cut(s) 474
BstKTI GATC 6 cut(s) 324, 920, 1000, 1291, 1447, 1541
BstMAI GTCTC 2 cut(s) 638, 653
BstMBI GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
BstMWI GCNNNNNNNGC 9 cut(s) 156, 469, 548, 838, 1040, 1132, 1255, 1585, 1840
BstNI CCWGG 7 cut(s) 528, 909, 1052, 1323, 1386, 1469, 1482
BstNSI RCATGY 3 cut(s) 623, 1100, 1490
BstSCI CCNGG 8 cut(s) 526, 907, 1000, 1050, 1321, 1384, 1467, 1480
BstSFI CTRYAG 2 cut(s) 1038, 1156
BstSLI GKGCMC 1 cut(s) 643
BstUI CGCG 2 cut(s) 472, 1751
BstV1I GCAGC 8 cut(s) 874, 1147, 1242, 1261, 1264, 1270, 1629, 1657
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 1 cut(s) 1538
BstXI CCANNNNNNTGG 1 cut(s) 605
BstYI RGATCY 1 cut(s) 1538
BsuRI GGCC 2 cut(s) 205, 962
BtgI CCRYGG 2 cut(s) 721, 1665
BtgZI GCGATG 1 cut(s) 1766
BtrI CACGTC 1 cut(s) 452
BtsCI GGATG 2 cut(s) 920, 1225
BtsI GCAGTG 1 cut(s) 1191
BtsIMutI CAGTG 6 cut(s) 142, 643, 784, 1191, 1705, 1791
BtuMI TCGCGA 1 cut(s) 1751
BveI ACCTGC 1 cut(s) 1412
Cac8I GCNNGC 8 cut(s) 553, 621, 674, 834, 883, 1456, 1590, 1675
CaiI CAGNNNCTG 2 cut(s) 153, 1255
CfoI GCGC 1 cut(s) 474
Cfr10I RCCGGY 1 cut(s) 672
Cfr13I GGNCC 6 cut(s) 203, 339, 961, 1048, 1054, 1774
Csp6I GTAC 4 cut(s) 890, 914, 1153, 1169
CspCI CAANNNNNGTGG 2 cut(s) 118, 153
CviQI GTAC 4 cut(s) 890, 914, 1153, 1169
DdeI CTNAG 8 cut(s) 209, 239, 635, 743, 930, 957, 1071, 1146
DpnI GATC 6 cut(s) 323, 919, 999, 1290, 1446, 1540
DpnII GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
DraIII CACNNNGTG 1 cut(s) 452
Eam1104I CTCTTC 1 cut(s) 990
EarI CTCTTC 1 cut(s) 990
EciI GGCGGA 1 cut(s) 428
Eco130I CCWWGG 3 cut(s) 721, 1641, 1665
Eco31I GGTCTC 1 cut(s) 638
Eco32I GATATC 1 cut(s) 1352
Eco47I GGWCC 4 cut(s) 339, 1048, 1054, 1774
Eco88I CYCGRG 1 cut(s) 485
EcoO109I RGGNCCY 2 cut(s) 961, 1054
EcoRI GAATTC 2 cut(s) 20, 682
EcoRII CCWGG 7 cut(s) 526, 907, 1050, 1321, 1384, 1467, 1480
EcoRV GATATC 1 cut(s) 1352
EcoT14I CCWWGG 3 cut(s) 721, 1641, 1665
ErhI CCWWGG 3 cut(s) 721, 1641, 1665
FaqI GGGAC 4 cut(s) 325, 1040, 1717, 1781
FauI CCCGC 2 cut(s) 103, 451
FbaI TGATCA 1 cut(s) 1444
FokI GGATG 2 cut(s) 907, 1212
FspBI CTAG 2 cut(s) 285, 752
GlaI GCGC 1 cut(s) 473
GsaI CCCAGC 1 cut(s) 655
GsuI CTGGAG 6 cut(s) 677, 698, 891, 1014, 1344, 1490
HaeIII GGCC 2 cut(s) 205, 962
HapII CCGG 5 cut(s) 39, 262, 673, 1002, 1762
HhaI GCGC 1 cut(s) 474
Hin6I GCGC 1 cut(s) 472
HinP1I GCGC 1 cut(s) 472
HincII GTYRAC 2 cut(s) 691, 775
HindII GTYRAC 2 cut(s) 691, 775
HindIII AAGCTT 2 cut(s) 839, 1360
HpaII CCGG 5 cut(s) 39, 262, 673, 1002, 1762
HphI GGTGA 3 cut(s) 589, 1059, 1107
Hpy166II GTNNAC 4 cut(s) 641, 691, 775, 1819
Hpy188III TCNNGA 7 cut(s) 39, 130, 485, 487, 1550, 1750, 1762
Hpy8I GTNNAC 4 cut(s) 641, 691, 775, 1819
Hpy99I CGWCG 5 cut(s) 176, 203, 304, 395, 453
HpyAV CCTTC 4 cut(s) 721, 990, 1239, 1285
HpyCH4III ACNGT 6 cut(s) 137, 779, 1200, 1604, 1786, 1887
HpyCH4IV ACGT 4 cut(s) 171, 451, 1510, 1821
HpyF10VI GCNNNNNNNGC 9 cut(s) 156, 469, 548, 838, 1040, 1132, 1255, 1585, 1840
HpyF3I CTNAG 8 cut(s) 209, 239, 635, 743, 930, 957, 1071, 1146
HpySE526I ACGT 4 cut(s) 171, 451, 1510, 1821
HspAI GCGC 1 cut(s) 472
Kpn2I TCCGGA 2 cut(s) 38, 1761
KroI GCCGGC 1 cut(s) 672
KroNI GCCGGC 1 cut(s) 674
Ksp22I TGATCA 1 cut(s) 1444
Kzo9I GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
LmnI GCTCC 4 cut(s) 164, 466, 829, 931
Lsp1109I GCAGC 8 cut(s) 874, 1147, 1242, 1261, 1264, 1270, 1629, 1657
LweI GCATC 1 cut(s) 201
MaeI CTAG 2 cut(s) 285, 752
MaeII ACGT 4 cut(s) 171, 451, 1510, 1821
MaeIII GTNAC 2 cut(s) 1065, 1582
MalI GATC 6 cut(s) 323, 919, 999, 1290, 1446, 1540
MbiI CCGCTC 2 cut(s) 482, 926
MboI GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
MboII GAAGA 3 cut(s) 307, 977, 1533
MflI RGATCY 1 cut(s) 1538
MhlI GDGCHC 1 cut(s) 643
MluCI AATT 9 cut(s) 20, 61, 279, 380, 645, 682, 790, 1021, 1504
MlyI GAGTC 5 cut(s) 398, 404, 410, 655, 1084
MmeI TCCRAC 4 cut(s) 127, 432, 438, 807
MroI TCCGGA 2 cut(s) 38, 1761
MroNI GCCGGC 1 cut(s) 672
MseI TTAA 4 cut(s) 69, 513, 851, 1824
MspA1I CMGCKG 4 cut(s) 227, 655, 1255, 1557
MspI CCGG 5 cut(s) 39, 262, 673, 1002, 1762
MspR9I CCNGG 8 cut(s) 528, 909, 1002, 1052, 1323, 1386, 1469, 1482
Mva1269I GAATGC 2 cut(s) 949, 1174
MvaI CCWGG 7 cut(s) 528, 909, 1052, 1323, 1386, 1469, 1482
MvnI CGCG 2 cut(s) 472, 1751
MwoI GCNNNNNNNGC 9 cut(s) 156, 469, 548, 838, 1040, 1132, 1255, 1585, 1840
NaeI GCCGGC 1 cut(s) 674
NciI CCSGG 1 cut(s) 1002
NcoI CCATGG 2 cut(s) 721, 1665
NdeII GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
NgoMIV GCCGGC 1 cut(s) 672
NlaIV GGNNCC 6 cut(s) 160, 341, 468, 963, 1056, 1426
NmuCI GTSAC 2 cut(s) 1065, 1582
NruI TCGCGA 1 cut(s) 1751
NspI RCATGY 3 cut(s) 623, 1100, 1490
NspV TTCGAA 1 cut(s) 1625
PaeI GCATGC 1 cut(s) 623
PaeR7I CTCGAG 1 cut(s) 485
PasI CCCWGGG 1 cut(s) 1481
PcsI WCGNNNNNNNCGW 2 cut(s) 296, 399
PctI GAATGC 2 cut(s) 949, 1174
PdiI GCCGGC 1 cut(s) 674
PfeI GAWTC 9 cut(s) 35, 42, 144, 235, 560, 704, 1103, 1688, 1758
PflFI GACNNNGTC 1 cut(s) 1772
PfoI TCCNGGA 3 cut(s) 907, 1000, 1321
PleI GAGTC 5 cut(s) 398, 404, 410, 655, 1083
PpsI GAGTC 5 cut(s) 398, 404, 410, 655, 1083
PpuMI RGGWCCY 1 cut(s) 1054
Psp5II RGGWCCY 1 cut(s) 1054
Psp6I CCWGG 7 cut(s) 526, 907, 1050, 1321, 1384, 1467, 1480
PspFI CCCAGC 1 cut(s) 651
PspGI CCWGG 7 cut(s) 526, 907, 1050, 1321, 1384, 1467, 1480
PspN4I GGNNCC 6 cut(s) 160, 341, 468, 963, 1056, 1426
PspPI GGNCC 6 cut(s) 203, 339, 961, 1048, 1054, 1774
PspPPI RGGWCCY 1 cut(s) 1054
PstNI CAGNNNCTG 2 cut(s) 153, 1255
PsuI RGATCY 1 cut(s) 1538
PsyI GACNNNGTC 1 cut(s) 1772
PvuII CAGCTG 3 cut(s) 227, 655, 1255
RruI TCGCGA 1 cut(s) 1751
RsaI GTAC 4 cut(s) 891, 915, 1154, 1170
RsaNI GTAC 4 cut(s) 890, 914, 1153, 1169
SaqAI TTAA 4 cut(s) 69, 513, 851, 1824
Sau3AI GATC 6 cut(s) 321, 917, 997, 1288, 1444, 1538
Sau96I GGNCC 6 cut(s) 203, 339, 961, 1048, 1054, 1774
SchI GAGTC 5 cut(s) 398, 404, 410, 655, 1084
ScrFI CCNGG 8 cut(s) 528, 909, 1002, 1052, 1323, 1386, 1469, 1482
SduI GDGCHC 1 cut(s) 643
SfaNI GCATC 1 cut(s) 201
SfcI CTRYAG 2 cut(s) 1038, 1156
Sfr274I CTCGAG 1 cut(s) 485
SfuI TTCGAA 1 cut(s) 1625
SinI GGWCC 4 cut(s) 339, 1048, 1054, 1774
SlaI CTCGAG 1 cut(s) 485
SmlI CTYRAG 2 cut(s) 485, 1164
SmoI CTYRAG 2 cut(s) 485, 1164
SphI GCATGC 1 cut(s) 623
Sse9I AATT 9 cut(s) 20, 61, 279, 380, 645, 682, 790, 1021, 1504
SspMI CTAG 2 cut(s) 285, 752
StyD4I CCNGG 8 cut(s) 526, 907, 1000, 1050, 1321, 1384, 1467, 1480
StyI CCWWGG 3 cut(s) 721, 1641, 1665
TaaI ACNGT 6 cut(s) 137, 779, 1200, 1604, 1786, 1887
TaiI ACGT 4 cut(s) 174, 454, 1513, 1824
TaqI TCGA 5 cut(s) 384, 486, 664, 1625, 1691
TaqII GACCGA 3 cut(s) 164, 327, 1814
TasI AATT 9 cut(s) 20, 61, 279, 380, 645, 682, 790, 1021, 1504
TatI WGTACW 3 cut(s) 889, 1152, 1168
TauI GCSGC 3 cut(s) 159, 472, 751
TfiI GAWTC 9 cut(s) 35, 42, 144, 235, 560, 704, 1103, 1688, 1758
Tru1I TTAA 4 cut(s) 69, 513, 851, 1824
Tru9I TTAA 4 cut(s) 69, 513, 851, 1824
TscAI CASTG 6 cut(s) 142, 643, 784, 1198, 1705, 1791
TseFI GTSAC 2 cut(s) 1065, 1582
TseI GCWGC 8 cut(s) 862, 1135, 1249, 1252, 1255, 1283, 1617, 1670
Tsp45I GTSAC 2 cut(s) 1065, 1582
TspDTI ATGAA 8 cut(s) 298, 308, 608, 891, 1304, 1533, 1583, 1862
TspGWI ACGGA 5 cut(s) 175, 187, 267, 317, 409
TspRI CASTG 6 cut(s) 142, 643, 784, 1198, 1705, 1791
Tth111I GACNNNGTC 1 cut(s) 1772
VneI GTGCAC 1 cut(s) 639
VpaK11BI GGWCC 4 cut(s) 339, 1048, 1054, 1774
XapI RAATTY 7 cut(s) 20, 279, 645, 682, 790, 1021, 1504
XceI RCATGY 3 cut(s) 623, 1100, 1490
XhoI CTCGAG 1 cut(s) 485
XspI CTAG 2 cut(s) 285, 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.