pycom06g18460
BZIP Family

Ocs element-binding factor 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
22232138 .. 22232602
465 bp
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UTR
Exon/CDS
Intron
pycom06g18460.1

Sequence Viewer

Length: 465 bp
ATGGATCTAAATGAATCCATGCCGATCTACCTGACCCGATTCTTCCCTATCTCTCATATCCATGTTCCAAACCCTGATTTCTCAGCAACCACCTCATCTCTTGGCAACGAAGCCGCCTTCGATGAAGCAGGGGAGCAGGACATGAACTACGAAAGAAAGCTCAAGAGAATGATATCCAACAGGGAGTCTGCAAGGAGGTCGCGAATGCGTAAGAAGAAGCAGATTGAAGAGCTGCAGTATCAGGTGGATCAGCTCCATTCTACCAATCGCCAGCTCTCGGAGAAGCTCATCCAACTGTTAGAAGGCAACCAACAGATCCTCCAGGAGAATGCTCAGCTGAAGGAGAGAGTCTCTTCCCTTCAAATCATCCATGCCGATCTCATTACACCTCTGAGGATTGAGGGAGATGTCACCGTTAACACAAATGGCAATCAGCTTACAGCCAAAGATTCAAGCACGCCATGA

Protein Analysis

155

Amino Acids

17.68

Weight (kDa)

6.09

Isoelectric Point (pI)

49.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 51 - 99 1e-09 Basic region leucine zipper
bZIP_1 PF00170 52 - 110 1.7e-13 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 202
AciI CCGC 1 cut(s) 114
AclWI GGATC 3 cut(s) 12, 255, 310
AcuI CTGAAG 1 cut(s) 359
AfiI CCNNNNNNNGG 1 cut(s) 277
AgsI TTSAA 3 cut(s) 227, 362, 453
AjnI CCWGG 1 cut(s) 321
AluBI AGCT 7 cut(s) 160, 232, 253, 274, 286, 337, 436
AluI AGCT 7 cut(s) 160, 232, 253, 274, 286, 337, 436
Alw26I GTCTC 1 cut(s) 355
AlwI GGATC 3 cut(s) 12, 255, 310
ApeKI GCWGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 403
BbvI GCAGC 1 cut(s) 219
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BciT130I CCWGG 1 cut(s) 323
BcoDI GTCTC 1 cut(s) 355
BfmI CTRYAG 1 cut(s) 233
BisI GCNGC 2 cut(s) 114, 233
BlpI GCTNAGC 1 cut(s) 333
BlsI GCNGC 2 cut(s) 115, 234
Bme1390I CCNGG 1 cut(s) 323
BmrFI CCNGG 1 cut(s) 323
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 1 cut(s) 305
Bpu1102I GCTNAGC 1 cut(s) 333
BpuEI CTTGAG 1 cut(s) 146
BsaXI ACNNNNNCTCC 2 cut(s) 303, 333
Bsc4I CCNNNNNNNGG 1 cut(s) 277
BseBI CCWGG 1 cut(s) 323
BseGI GGATG 2 cut(s) 288, 366
BseLI CCNNNNNNNGG 1 cut(s) 277
BseMII CTCAG 3 cut(s) 96, 347, 383
BseXI GCAGC 1 cut(s) 219
Bsh1236I CGCG 1 cut(s) 202
BslI CCNNNNNNNGG 1 cut(s) 277
BsmAI GTCTC 1 cut(s) 355
BsmI GAATGC 2 cut(s) 210, 334
Bsp143I GATC 5 cut(s) 4, 24, 247, 315, 376
Bsp1720I GCTNAGC 1 cut(s) 333
Bsp68I TCGCGA 1 cut(s) 202
BspACI CCGC 1 cut(s) 114
BspCNI CTCAG 3 cut(s) 95, 346, 384
BspFNI CGCG 1 cut(s) 202
BspMAI CTGCAG 1 cut(s) 237
BspPI GGATC 3 cut(s) 12, 255, 310
BspQI GCTCTTC 1 cut(s) 222
BssMI GATC 5 cut(s) 4, 24, 247, 315, 376
Bst2UI CCWGG 1 cut(s) 323
Bst4CI ACNGT 2 cut(s) 297, 415
Bst6I CTCTTC 2 cut(s) 222, 358
BstC8I GCNNGC 2 cut(s) 272, 458
BstDEI CTNAG 3 cut(s) 82, 333, 392
BstF5I GGATG 2 cut(s) 288, 366
BstFNI CGCG 1 cut(s) 202
BstKTI GATC 5 cut(s) 7, 27, 250, 318, 379
BstMAI GTCTC 1 cut(s) 355
BstMBI GATC 5 cut(s) 4, 24, 247, 315, 376
BstNI CCWGG 1 cut(s) 323
BstSCI CCNGG 1 cut(s) 321
BstSFI CTRYAG 1 cut(s) 233
BstUI CGCG 1 cut(s) 202
BstV1I GCAGC 1 cut(s) 219
BstX2I RGATCY 2 cut(s) 4, 315
BstYI RGATCY 2 cut(s) 4, 315
BtsCI GGATG 2 cut(s) 288, 366
BtuMI TCGCGA 1 cut(s) 202
Cac8I GCNNGC 2 cut(s) 272, 458
CviAII CATG 5 cut(s) 19, 62, 142, 371, 462
CviJI RGCY 9 cut(s) 113, 160, 232, 253, 274, 286, 337, 436, 443
CviKI_1 RGCY 9 cut(s) 113, 160, 232, 253, 274, 286, 337, 436, 443
DdeI CTNAG 3 cut(s) 82, 333, 392
DpnI GATC 5 cut(s) 6, 26, 249, 317, 378
DpnII GATC 5 cut(s) 4, 24, 247, 315, 376
Eam1104I CTCTTC 2 cut(s) 222, 358
EarI CTCTTC 2 cut(s) 222, 358
Eco32I GATATC 1 cut(s) 174
Eco57I CTGAAG 1 cut(s) 359
EcoRII CCWGG 1 cut(s) 321
EcoRV GATATC 1 cut(s) 174
FaeI CATG 5 cut(s) 22, 65, 145, 374, 465
FaiI YATR 6 cut(s) 20, 57, 63, 143, 372, 463
FatI CATG 5 cut(s) 18, 61, 141, 370, 461
Fnu4HI GCNGC 2 cut(s) 114, 233
FokI GGATG 2 cut(s) 275, 353
Fsp4HI GCNGC 2 cut(s) 114, 233
GluI GCNGC 2 cut(s) 114, 233
GsuI CTGGAG 1 cut(s) 305
Hin1II CATG 5 cut(s) 22, 65, 145, 374, 465
HincII GTYRAC 1 cut(s) 418
HindII GTYRAC 1 cut(s) 418
HinfI GANTC 5 cut(s) 14, 39, 185, 348, 449
HpaI GTTAAC 1 cut(s) 418
HphI GGTGA 1 cut(s) 403
Hpy166II GTNNAC 1 cut(s) 418
Hpy188I TCNGA 2 cut(s) 280, 393
Hpy188III TCNNGA 2 cut(s) 163, 201
Hpy8I GTNNAC 1 cut(s) 418
HpyAV CCTTC 4 cut(s) 127, 296, 334, 368
HpyCH4III ACNGT 2 cut(s) 297, 415
HpyCH4V TGCA 2 cut(s) 191, 235
HpyF3I CTNAG 3 cut(s) 82, 333, 392
Hsp92II CATG 5 cut(s) 22, 65, 145, 374, 465
KspAI GTTAAC 1 cut(s) 418
Kzo9I GATC 5 cut(s) 4, 24, 247, 315, 376
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 2 cut(s) 133, 258
LpnPI CCDG 9 cut(s) 44, 87, 114, 122, 166, 227, 284, 308, 335
Lsp1109I GCAGC 1 cut(s) 219
MaeIII GTNAC 1 cut(s) 409
MalI GATC 5 cut(s) 6, 26, 249, 317, 378
MboI GATC 5 cut(s) 4, 24, 247, 315, 376
MboII GAAGA 4 cut(s) 34, 226, 239, 345
MflI RGATCY 2 cut(s) 4, 315
MlyI GAGTC 2 cut(s) 194, 357
MmeI TCCRAC 2 cut(s) 201, 316
MnlI CCTC 6 cut(s) 103, 189, 329, 387, 394, 399
MseI TTAA 1 cut(s) 417
MslI CAYNNNNRTG 1 cut(s) 60
MspA1I CMGCKG 1 cut(s) 337
MspR9I CCNGG 1 cut(s) 323
Mva1269I GAATGC 2 cut(s) 210, 334
MvaI CCWGG 1 cut(s) 323
MvnI CGCG 1 cut(s) 202
NdeII GATC 5 cut(s) 4, 24, 247, 315, 376
NlaIII CATG 5 cut(s) 22, 65, 145, 374, 465
NmuCI GTSAC 1 cut(s) 409
NruI TCGCGA 1 cut(s) 202
PciSI GCTCTTC 1 cut(s) 222
PctI GAATGC 2 cut(s) 210, 334
PfeI GAWTC 3 cut(s) 14, 39, 449
PfoI TCCNGGA 1 cut(s) 321
PkrI GCNGC 2 cut(s) 115, 234
PleI GAGTC 2 cut(s) 193, 356
PpsI GAGTC 2 cut(s) 193, 356
Psp6I CCWGG 1 cut(s) 321
PspGI CCWGG 1 cut(s) 321
PstI CTGCAG 1 cut(s) 237
PsuI RGATCY 2 cut(s) 4, 315
PvuII CAGCTG 1 cut(s) 337
RruI TCGCGA 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 60
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 1 cut(s) 417
SatI GCNGC 2 cut(s) 114, 233
Sau3AI GATC 5 cut(s) 4, 24, 247, 315, 376
SchI GAGTC 2 cut(s) 194, 357
ScrFI CCNGG 1 cut(s) 323
SfcI CTRYAG 1 cut(s) 233
SmiMI CAYNNNNRTG 1 cut(s) 60
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
SsiI CCGC 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 321
TaaI ACNGT 2 cut(s) 297, 415
TaqI TCGA 1 cut(s) 120
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 3 cut(s) 14, 39, 449
Tru1I TTAA 1 cut(s) 417
Tru9I TTAA 1 cut(s) 417
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 1 cut(s) 232
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 3 cut(s) 27, 138, 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.