pycom06g18590

Mis12 protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
22290413 .. 22291056
644 bp
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UTR
Exon/CDS
Intron
pycom06g18590.1

Sequence Viewer

Length: 318 bp
ATGCAATCTTTTTCGATAATCCCCTGTGGGGTTTACTTGTTTGTTTATTTGTTCGTTTATTCCTCTGTAGGAGGGGATGGACCACCTGTCGACGCTTCTTTATGTCAAAATGCAATCGTTGACGCAGACCTGGATGCCGAGCTGGATTTGTTGAGGAATGAACTTACTGAGGCTGGTAAGGAGAATGCTGCGCTGAATGGAGAGATCCAATCGTTAGAAGGACAGTCTGCTTCCAGAGATCGTTGTTCTGCGCTTGTCAATGCGACCTTGCAACAATATGACCTAAACTCTTACCATGAGATGTTCCAGGGTAAGTAA

Protein Analysis

106

Amino Acids

11.41

Weight (kDa)

4.08

Isoelectric Point (pI)

30.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 90
AclWI GGATC 1 cut(s) 199
AfiI CCNNNNNNNGG 1 cut(s) 28
AhdI GACNNNNNGTC 1 cut(s) 86
AjnI CCWGG 2 cut(s) 129, 306
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
AlwI GGATC 1 cut(s) 199
ApeKI GCWGC 1 cut(s) 188
AspLEI GCGC 2 cut(s) 193, 253
AspS9I GGNCC 1 cut(s) 80
AvaII GGWCC 1 cut(s) 80
BbvI GCAGC 1 cut(s) 175
BccI CCATC 1 cut(s) 71
BciT130I CCWGG 2 cut(s) 131, 308
BfmI CTRYAG 1 cut(s) 66
BisI GCNGC 1 cut(s) 189
BlsI GCNGC 1 cut(s) 190
Bme1390I CCNGG 2 cut(s) 131, 308
Bme18I GGWCC 1 cut(s) 80
BmeRI GACNNNNNGTC 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 80
BmrFI CCNGG 2 cut(s) 131, 308
BmsI GCATC 1 cut(s) 124
BsaJI CCNNGG 1 cut(s) 307
Bsc4I CCNNNNNNNGG 1 cut(s) 28
BseBI CCWGG 2 cut(s) 131, 308
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 2 cut(s) 82, 139
BseLI CCNNNNNNNGG 1 cut(s) 28
BseMII CTCAG 1 cut(s) 159
BseXI GCAGC 1 cut(s) 175
BslI CCNNNNNNNGG 1 cut(s) 28
BsmI GAATGC 1 cut(s) 190
Bsp143I GATC 2 cut(s) 204, 238
BspCNI CTCAG 1 cut(s) 160
BspPI GGATC 1 cut(s) 199
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 2 cut(s) 204, 238
Bst2UI CCWGG 2 cut(s) 131, 308
Bst4CI ACNGT 1 cut(s) 225
BstDEI CTNAG 1 cut(s) 168
BstF5I GGATG 2 cut(s) 82, 139
BstHHI GCGC 2 cut(s) 193, 253
BstKTI GATC 2 cut(s) 207, 241
BstMBI GATC 2 cut(s) 204, 238
BstNI CCWGG 2 cut(s) 131, 308
BstSCI CCNGG 2 cut(s) 129, 306
BstSFI CTRYAG 1 cut(s) 66
BstV1I GCAGC 1 cut(s) 175
BstX2I RGATCY 1 cut(s) 204
BstYI RGATCY 1 cut(s) 204
BtsCI GGATG 2 cut(s) 82, 139
CfoI GCGC 2 cut(s) 193, 253
Cfr13I GGNCC 1 cut(s) 80
CseI GACGC 2 cut(s) 101, 131
CviAII CATG 1 cut(s) 296
CviJI RGCY 2 cut(s) 142, 173
CviKI_1 RGCY 2 cut(s) 142, 173
DdeI CTNAG 1 cut(s) 168
DpnI GATC 2 cut(s) 206, 240
DpnII GATC 2 cut(s) 204, 238
DriI GACNNNNNGTC 1 cut(s) 86
Eam1105I GACNNNNNGTC 1 cut(s) 86
Eco47I GGWCC 1 cut(s) 80
EcoRII CCWGG 2 cut(s) 129, 306
FaeI CATG 1 cut(s) 299
FaiI YATR 3 cut(s) 103, 279, 297
FatI CATG 1 cut(s) 295
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 1 cut(s) 189
FokI GGATG 2 cut(s) 89, 146
Fsp4HI GCNGC 1 cut(s) 189
GlaI GCGC 2 cut(s) 192, 252
GluI GCNGC 1 cut(s) 189
HgaI GACGC 2 cut(s) 101, 131
HhaI GCGC 2 cut(s) 193, 253
Hin1II CATG 1 cut(s) 299
Hin6I GCGC 2 cut(s) 191, 251
HinP1I GCGC 2 cut(s) 191, 251
HincII GTYRAC 2 cut(s) 91, 121
HindII GTYRAC 2 cut(s) 91, 121
Hpy166II GTNNAC 3 cut(s) 34, 91, 121
Hpy188III TCNNGA 1 cut(s) 234
Hpy8I GTNNAC 3 cut(s) 34, 91, 121
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 1 cut(s) 225
HpyCH4V TGCA 3 cut(s) 4, 113, 271
HpyF3I CTNAG 1 cut(s) 168
Hsp92II CATG 1 cut(s) 299
HspAI GCGC 2 cut(s) 191, 251
Kzo9I GATC 2 cut(s) 204, 238
LpnPI CCDG 8 cut(s) 37, 99, 116, 128, 143, 159, 247, 293
Lsp1109I GCAGC 1 cut(s) 175
LweI GCATC 1 cut(s) 124
MalI GATC 2 cut(s) 206, 240
MboI GATC 2 cut(s) 204, 238
MflI RGATCY 1 cut(s) 204
MnlI CCTC 4 cut(s) 65, 73, 147, 163
MspR9I CCNGG 2 cut(s) 131, 308
Mva1269I GAATGC 1 cut(s) 190
MvaI CCWGG 2 cut(s) 131, 308
NdeII GATC 2 cut(s) 204, 238
NlaIII CATG 1 cut(s) 299
NmeAIII GCCGAG 1 cut(s) 163
PctI GAATGC 1 cut(s) 190
PkrI GCNGC 1 cut(s) 190
Psp6I CCWGG 2 cut(s) 129, 306
PspGI CCWGG 2 cut(s) 129, 306
PspPI GGNCC 1 cut(s) 80
PsuI RGATCY 1 cut(s) 204
SalI GTCGAC 1 cut(s) 89
SatI GCNGC 1 cut(s) 189
Sau3AI GATC 2 cut(s) 204, 238
Sau96I GGNCC 1 cut(s) 80
ScrFI CCNGG 2 cut(s) 131, 308
SetI ASST 5 cut(s) 88, 132, 144, 269, 285
SfaNI GCATC 1 cut(s) 124
SfcI CTRYAG 1 cut(s) 66
SinI GGWCC 1 cut(s) 80
StyD4I CCNGG 2 cut(s) 129, 306
TaaI ACNGT 1 cut(s) 225
TaqI TCGA 2 cut(s) 14, 90
TseI GCWGC 1 cut(s) 188
TspDTI ATGAA 1 cut(s) 174
VpaK11BI GGWCC 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.