Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0006892

Physical Location & Seq

Genomic Coordinates Forward (+)

23510501 .. 23515129

Gene Structure 4629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGTGTTCAAGGCCAGGTTCTTCTCCTCCAAGAAGTCCGACTCCTCCAACAGCCCCGATGGCTCCAATAATAGTCCGCGATCTCTGGGTTCCAACTCCCCTATCCGATCCGATAAGAAGAAGCCCAAATCCTCGTCCAAAGACGACTCGCCGGGCCCGAGTACCAGTTCTGGCGGCGGCGGCTTCAGTCGGCGGAGTCTAGTCAAAGACTTGTCAAAGAAGAAGGATGTGAAGGGGAAAGAGAGCCCAGCTCAGCTGAAGACGCCGGCGAAGTCCGCGAGCTCGACTGGCGCGACTCCCAAGAAGTCGTCTGCGTCCACAACGGGGGTGGCGGAGTCTGCGGCGTCGGTTTCTCCCATTCTGGCGTCGTCGCTGGGGTTGAATAGGATAAAGACGAGATCGGGGCCGTTACCGCAGGAGAGCTTTTTCGGGTTTAGGGGCGACAAAGGGTCGGCGCTGGGCTCGAGTAATTTGTCTAGGCCGGGCGTCGGCGGCGATCGTTTAGGGTCGGGCAGTGGGGCCAAGAAGAAGGAGGCTGCGAGTCAGACTAGGATTGGGTTCAATGAAAATGTGGTAAGTGGGAATTGGGCTGATAATGGCAGCAATTCTGATGCTGCATCAACTGGTAGCTTGCCTTCGAGAGACCGGAGCCCGAACGTGGTGGCGCCATCGCGGTTGCTCAACGGGGAATCGTCGGCAGAAGCTGGGAGAAACATATCATCTTGGGGTCACTCTGGCGGCTTAAGAAGTTCGGATGTATGTACACCAGAGACTGCATATGATTGTGAAAATCCTAAGGAGTCCGAGTCTCCCCGTTTTCAAGCTATACTCCGCTTAACGAGTGCACCAAGAAAGAGGTTTCCTGCTGATATAAAAAGTTTTTCCCACGAACTGAATTCAAAAGGTGTAAGACCTTTCCCATTTTGGAAGCCTCGAGGCTTGAACAACCTGGAGGAAATCTTGGTTGCGATTAGGGCAAAGTTTGACAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATATTTGCAGCAGATTTAGTTGGAATTCTTGAAAAGGATGCAGATAATCATCCAGAGTGGCAGGAAACACTTGAGGATTTGCTGGTTTTGGCTCGAAGTTGTGCAATGACATCATCTGGAGAGTTTTGGCTTCAGTGTGAGGGCATAGTTCAGGAATTGGATGATAGACGTCAAGAACTTCCTCCGGGGGTGCTGAAGCAGCTTCACACTCGAATGCTTTTCATACTCACAAGGTGTACTAGGTTGCTGCAATTCCATAAGGAAACTGGATTGGCTGAGGATGAACAAGTTTTCCAGCTTCGTCAATCAAGAGTTCTGCGTTTCTCTGATAAAAGAATTCCTCCAAGTTTGGCAAAGGATCCAAAGAGTTTAAGCGTTGCAAAAGCCTCTAAAGCAGCTTCAGCTAGGAAATTTTACAGTCAGGAGCAACATGGCTTGGAATGGAAGAGAGACCATGTTATACAACTGGGAAATTTGTTCACACCTCCTGTTGATCAACCCTCTAAGAATTTGGAGTCTCCTGCTGGTAGGGACCGGATGACATCATGGAAGAAATTCCCATCTCCGGTTGCAAAAAGCATGAAAGAAGCTACTGAATTTAAGGAGCAGAGTGATTCTAAGGTTGAACATTTGAAAGGTTCAGACAACAAGAGAGGGACTTCTGACATCGATCCTACTTCTGTTAAGCCTCCTGAGCCTTCTGGCAAGGGTTCTCATGAACGTTCTTCCAAGCACCAGCACAAACCTTCTTGGGGTTGGGGAAATCAACAAAATGTATCTGACGATAGTTCTATAATATGTCGCATCTGTGAGGAGGAGGTTCCAACTGCAAATGTGGAAGACCATTCAAGAATTTGTGCAATTGCTGATCGATGCGATCAGAAAGGTATAAGTGTGAATGAACGTCTTGTCATAATTTCTGAAACCCTTGAAAAACTGATGGAGTCCTTTGCTCAAAAGGATATCCAGCATGGTGTAGGAAGTCCAGACATTGTGAAAGCATCTAGTTCAAGCGTGACAGAAGAATCAGAGGTTTTATCTCCAAAACTTTGTGACTGGTCCCACAGAGGCTCAGAGGACATGCTTGATTGTTTTCCTGAAGCTGATAATTCATCTTTTATGGATGACCTGAAAGGTCTACCTTCCATGTCATGTAGAACTCGTTTTGGTCCAAAGTCTGATCAAGGAATGACAACATCATCTGCAGGCAGCATGACTCCTAGGTCTCCCTTATTGACCCCAAGTGGCAGTCAAATTGACTTGCTCCTCGCAGGCAAGGCTTCTTTCTCTGAGCAAGACGATATACCTCAGATGAATGAACTTTCTGATATTGCTCGGTGCGTAGCAAATACACCTTTGGATGATGATCGATCTATGCCATATCTACTGACTTGTCTTGAAGACTTGAGAGTTGTTATAGACCGCAGAAAGTTTGATGCACTTACCGTGGAAACATTTGGGGCACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAACTTTGTGAGTTAGTGGATGATGAGAAGGTTGATTTAGCAACTACTGTAATTGATGAAGAAGCTCCTTTAGAAGATGACGTGGTTCGTACAAGCCCTATACCTTTTTCCAAGGACCGAACATCTATAGATGATTTTGAAATTATCAAACCAATAAGTCGTGGGGCATTTGGACGAGTTTTCTTAGCTAAAAAGAGAACAACGGGGGATCTTTTTGCGATTAAGGCTGATGATCTCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

920

Amino Acids

100.4

Weight (kDa)

7.2

Isoelectric Point (pI)

51.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IREH1	PF26031	309 - 427	2e-56	IREH1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17850
fragaria_vesca	FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 FvH4_5g17560
malus_domestica	MD06G1231400.v1.1 MD06G1231500.v1.1 MD14G1238200.v1.1
prunus_persica	Prupe.5G235400_v2.0.a1
pyrus_communis	pycom06g20530 pycom06g20540 pycom14g19930 pycom14g19940
rosa_chinensis	RchiOBHm_Chr7g0178091
rosa_laevigata	RLG00000005472
rosa_multiflora	Rmu_co8223356.1_g000001 Rmu_sc0000425.1_g000008
rosa_roxburghii	Rroxscaffold_3G00275190
rosa_rugosa	Rorug06G0413400 Rorug06G0413500 Rorug06G0413500
rosa_samantha	Rh7AG012700 Rh7BG012600 Rh7CG012600 Rh7DG012900
rosa_wichuraiana	Rw7G001000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2242
AatII	GACGTC	1 cut(s)	1192
AbsI	CCTCGAGG	1 cut(s)	933
AccB1I	GGYRCC	1 cut(s)	664
AccI	GTMKAC	1 cut(s)	2158
AccII	CGCG	4 cut(s)	79, 278, 293, 673
AclI	AACGTT	1 cut(s)	1741
AclWI	GGATC	5 cut(s)	102, 1373, 1386, 1685, 2733
AcsI	RAATTY	9 cut(s)	895, 1044, 1356, 1430, 1492, 1528, 1574, 1616, 1872
AcuI	CTGAAG	6 cut(s)	169, 278, 1136, 1235, 1404, 2139
AcyI	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
AdeI	CACNNNGTG	1 cut(s)	1254
AfaI	GTAC	4 cut(s)	163, 763, 1258, 2608
AfiI	CCNNNNNNNGG	5 cut(s)	324, 488, 658, 1585, 1772
AflII	CTTAAG	1 cut(s)	742
AhdI	GACNNNNNGTC	1 cut(s)	448
AjiI	CACGTC	1 cut(s)	2599
AjnI	CCWGG	2 cut(s)	14, 948
AloI	GAACNNNNNNTCC	2 cut(s)	1296, 1328
Alw21I	GWGCWC	2 cut(s)	284, 847
Alw26I	GTCTC	6 cut(s)	636, 764, 813, 1464, 1542, 2250
Alw44I	GTGCAC	1 cut(s)	843
AlwI	GGATC	5 cut(s)	102, 1373, 1386, 1685, 2733
AlwNI	CAGNNNCTG	2 cut(s)	704, 773
Ama87I	CYCGRG	3 cut(s)	157, 463, 933
AoxI	GGCC	5 cut(s)	12, 154, 404, 479, 519
ApaI	GGGCCC	1 cut(s)	158
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	8 cut(s)	536, 600, 614, 1028, 1219, 1267, 1415, 2229
ApoI	RAATTY	9 cut(s)	895, 1044, 1356, 1430, 1492, 1528, 1574, 1616, 1872
Asp700I	GAANNNNTTC	1 cut(s)	1574
AspA2I	CCTAGG	1 cut(s)	2240
AspLEI	GCGC	3 cut(s)	293, 457, 667
AspS9I	GGNCC	8 cut(s)	154, 155, 404, 519, 1552, 2079, 2189, 2632
AsuC2I	CCSGG	3 cut(s)	153, 483, 1206
AvaI	CYCGRG	3 cut(s)	157, 463, 933
AvaII	GGWCC	4 cut(s)	1552, 2079, 2189, 2632
AvrII	CCTAGG	1 cut(s)	2240
AxyI	CCTNAGG	1 cut(s)	795
BaeGI	GKGCMC	3 cut(s)	158, 847, 2485
BamHI	GGATCC	1 cut(s)	1378
BanI	GGYRCC	1 cut(s)	664
BanII	GRGCYC	5 cut(s)	158, 248, 284, 464, 653
BarI	GAAGNNNNNNTAC	2 cut(s)	619, 651
BbsI	GAAGAC	3 cut(s)	266, 1866, 2427
Bbv12I	GWGCWC	2 cut(s)	284, 847
BbvCI	CCTCAGC	1 cut(s)	1296
BbvI	GCAGC	8 cut(s)	523, 601, 612, 1040, 1231, 1254, 1427, 2241
BccI	CCATC	4 cut(s)	53, 676, 1588, 1954
BceAI	ACGGC	1 cut(s)	391
BciT130I	CCWGG	2 cut(s)	16, 950
BclI	TGATCA	2 cut(s)	1513, 2200
BcnI	CCSGG	3 cut(s)	153, 483, 1206
BcoDI	GTCTC	6 cut(s)	636, 764, 813, 1464, 1542, 2250
BfaI	CTAG	7 cut(s)	200, 477, 549, 1260, 1425, 2025, 2241
BfmI	CTRYAG	2 cut(s)	2223, 2643
BfoI	RGCGCY	2 cut(s)	458, 668
BfrI	CTTAAG	1 cut(s)	742
BglI	GCCNNNNNGGC	1 cut(s)	60
BlnI	CCTAGG	1 cut(s)	2240
BlpI	GCTNAGC	1 cut(s)	252
Bme1390I	CCNGG	5 cut(s)	16, 153, 483, 950, 1206
Bme18I	GGWCC	4 cut(s)	1552, 2079, 2189, 2632
BmeRI	GACNNNNNGTC	1 cut(s)	448
BmeT110I	CYCGRG	3 cut(s)	157, 463, 933
BmgBI	CACGTC	1 cut(s)	2599
BmgT120I	GGNCC	8 cut(s)	154, 155, 404, 519, 1552, 2079, 2189, 2632
BmrFI	CCNGG	5 cut(s)	16, 153, 483, 950, 1206
BmrI	ACTGGG	1 cut(s)	1496
BmsI	GCATC	7 cut(s)	601, 626, 1048, 1833, 1883, 2030, 2446
BmuI	ACTGGG	1 cut(s)	1496
BpiI	GAAGAC	3 cut(s)	266, 1866, 2427
BplI	GAGNNNNNCTC	2 cut(s)	235, 267
BpmI	CTGGAG	2 cut(s)	971, 1158
Bpu10I	CCTNAGC	2 cut(s)	1296, 1713
Bpu1102I	GCTNAGC	1 cut(s)	252
BpuEI	CTTGAG	2 cut(s)	1112, 2446
BpuMI	CCSGG	3 cut(s)	153, 483, 1206
Bsa29I	ATCGAT	3 cut(s)	1689, 1891, 2389
BsaBI	GATNNNNATC	2 cut(s)	1068, 2385
BsaHI	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
BsaI	GGTCTC	3 cut(s)	636, 1464, 2250
BsaJI	CCNNGG	4 cut(s)	1205, 2240, 2466, 2628
BsaWI	WCCGGW	3 cut(s)	645, 1554, 1585
BsaXI	ACNNNNNCTCC	2 cut(s)	791, 821
Bsc4I	CCNNNNNNNGG	5 cut(s)	324, 488, 658, 1585, 1772
Bse118I	RCCGGY	1 cut(s)	265
Bse1I	ACTGG	6 cut(s)	165, 292, 628, 1291, 1491, 2081
Bse21I	CCTNAGG	1 cut(s)	795
Bse3DI	GCAATG	1 cut(s)	1131
Bse8I	GATNNNNATC	2 cut(s)	1068, 2385
BseBI	CCWGG	2 cut(s)	16, 950
BseCI	ATCGAT	3 cut(s)	1689, 1891, 2389
BseDI	CCNNGG	4 cut(s)	1205, 2240, 2466, 2628
BseJI	GATNNNNATC	2 cut(s)	1068, 2385
BseLI	CCNNNNNNNGG	5 cut(s)	324, 488, 658, 1585, 1772
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	6 cut(s)	266, 1287, 1704, 2106, 2301, 2342
BseNI	ACTGG	6 cut(s)	165, 292, 628, 1291, 1491, 2081
BseRI	GAGGAG	5 cut(s)	16, 34, 1847, 1850, 2276
BseSI	GKGCMC	3 cut(s)	158, 847, 2485
BseXI	GCAGC	8 cut(s)	523, 601, 612, 1040, 1231, 1254, 1427, 2241
BseYI	CCCAGC	4 cut(s)	247, 373, 457, 704
Bsh1236I	CGCG	4 cut(s)	79, 278, 293, 673
Bsh1285I	CGRYCG	1 cut(s)	499
BshFI	GGCC	5 cut(s)	14, 156, 406, 481, 521
BshNI	GGYRCC	1 cut(s)	664
BshVI	ATCGAT	3 cut(s)	1689, 1891, 2389
BsiEI	CGRYCG	1 cut(s)	499
BsiHKAI	GWGCWC	2 cut(s)	284, 847
BsiHKCI	CYCGRG	3 cut(s)	157, 463, 933
BsiSI	CCGG	7 cut(s)	152, 266, 482, 646, 1205, 1555, 1586
BslFI	GGGAC	3 cut(s)	1565, 1690, 2065
BslI	CCNNNNNNNGG	5 cut(s)	324, 488, 658, 1585, 1772
BsmAI	GTCTC	6 cut(s)	636, 764, 813, 1464, 1542, 2250
BsmFI	GGGAC	3 cut(s)	1565, 1690, 2065
BsmI	GAATGC	1 cut(s)	1239
BsnI	GGCC	5 cut(s)	14, 156, 406, 481, 521
Bso31I	GGTCTC	3 cut(s)	636, 1464, 2250
BsoBI	CYCGRG	3 cut(s)	157, 463, 933
Bsp120I	GGGCCC	1 cut(s)	154
Bsp1286I	GDGCHC	7 cut(s)	158, 248, 284, 464, 653, 847, 2485
Bsp1407I	TGTACA	1 cut(s)	761
Bsp1720I	GCTNAGC	1 cut(s)	252
BspANI	GGCC	5 cut(s)	14, 156, 406, 481, 521
BspCNI	CTCAG	6 cut(s)	265, 1288, 1705, 2105, 2302, 2341
BspDI	ATCGAT	3 cut(s)	1689, 1891, 2389
BspFNI	CGCG	4 cut(s)	79, 278, 293, 673
BspHI	TCATGA	1 cut(s)	1735
BspMAI	CTGCAG	1 cut(s)	2227
BspPI	GGATC	5 cut(s)	102, 1373, 1386, 1685, 2733
BspT107I	GGYRCC	1 cut(s)	664
BspTI	CTTAAG	1 cut(s)	742
BspTNI	GGTCTC	3 cut(s)	636, 1464, 2250
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	1 cut(s)	265
BsrGI	TGTACA	1 cut(s)	761
BsrI	ACTGG	6 cut(s)	165, 292, 628, 1291, 1491, 2081
BssAI	RCCGGY	1 cut(s)	265
BssECI	CCNNGG	4 cut(s)	1205, 2240, 2466, 2628
BssNI	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
BssT1I	CCWWGG	2 cut(s)	2240, 2628
Bst2UI	CCWGG	2 cut(s)	16, 950
Bst4CI	ACNGT	3 cut(s)	1439, 2467, 2566
Bst6I	CTCTTC	1 cut(s)	1460
BstACI	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
BstAFI	CTTAAG	1 cut(s)	742
BstAUI	TGTACA	1 cut(s)	761
BstC8I	GCNNGC	6 cut(s)	267, 280, 632, 2227, 2293, 2485
BstDSI	CCRYGG	1 cut(s)	2466
BstFNI	CGCG	4 cut(s)	79, 278, 293, 673
BstH2I	RGCGCY	2 cut(s)	458, 668
BstHHI	GCGC	3 cut(s)	293, 457, 667
BstMAI	GTCTC	6 cut(s)	636, 764, 813, 1464, 1542, 2250
BstMCI	CGRYCG	1 cut(s)	499
BstNI	CCWGG	2 cut(s)	16, 950
BstNSI	RCATGY	1 cut(s)	2104
BstSCI	CCNGG	5 cut(s)	14, 151, 481, 948, 1204
BstSFI	CTRYAG	2 cut(s)	2223, 2643
BstSLI	GKGCMC	3 cut(s)	158, 847, 2485
BstUI	CGCG	4 cut(s)	79, 278, 293, 673
BstV1I	GCAGC	8 cut(s)	523, 601, 612, 1040, 1231, 1254, 1427, 2241
BstV2I	GAAGAC	3 cut(s)	266, 1866, 2427
BstX2I	RGATCY	2 cut(s)	1378, 2725
BstYI	RGATCY	2 cut(s)	1378, 2725
Bsu15I	ATCGAT	3 cut(s)	1689, 1891, 2389
Bsu36I	CCTNAGG	1 cut(s)	795
BsuRI	GGCC	5 cut(s)	14, 156, 406, 481, 521
BsuTUI	ATCGAT	3 cut(s)	1689, 1891, 2389
BtgI	CCRYGG	1 cut(s)	2466
BtgZI	GCGATG	1 cut(s)	654
BtrI	CACGTC	1 cut(s)	2599
BtsI	GCAGTG	1 cut(s)	520
BtsIMutI	CAGTG	2 cut(s)	520, 1160
Cac8I	GCNNGC	6 cut(s)	267, 280, 632, 2227, 2293, 2485
CaiI	CAGNNNCTG	2 cut(s)	704, 773
CciI	TCATGA	1 cut(s)	1735
CfoI	GCGC	3 cut(s)	293, 457, 667
Cfr10I	RCCGGY	1 cut(s)	265
Cfr13I	GGNCC	8 cut(s)	154, 155, 404, 519, 1552, 2079, 2189, 2632
ClaI	ATCGAT	3 cut(s)	1689, 1891, 2389
CseI	GACGC	5 cut(s)	271, 303, 333, 354, 475
Csp6I	GTAC	4 cut(s)	162, 762, 1257, 2607
CspCI	CAANNNNNGTGG	2 cut(s)	309, 344
CviQI	GTAC	4 cut(s)	162, 762, 1257, 2607
DinI	GGCGCC	1 cut(s)	666
DraIII	CACNNNGTG	1 cut(s)	1254
DrdI	GACNNNNNNGTC	1 cut(s)	2242
DriI	GACNNNNNGTC	1 cut(s)	448
DseDI	GACNNNNNNGTC	1 cut(s)	2242
Eam1104I	CTCTTC	1 cut(s)	1460
Eam1105I	GACNNNNNGTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	1460
EciI	GGCGGA	2 cut(s)	208, 347
Ecl136II	GAGCTC	1 cut(s)	282
Eco130I	CCWWGG	2 cut(s)	2240, 2628
Eco24I	GRGCYC	5 cut(s)	158, 248, 284, 464, 653
Eco31I	GGTCTC	3 cut(s)	636, 1464, 2250
Eco32I	GATATC	1 cut(s)	1984
Eco47I	GGWCC	4 cut(s)	1552, 2079, 2189, 2632
Eco53kI	GAGCTC	1 cut(s)	282
Eco57I	CTGAAG	6 cut(s)	169, 278, 1136, 1235, 1404, 2139
Eco81I	CCTNAGG	1 cut(s)	795
Eco88I	CYCGRG	3 cut(s)	157, 463, 933
EcoICRI	GAGCTC	1 cut(s)	282
EcoRI	GAATTC	3 cut(s)	895, 1044, 1356
EcoRII	CCWGG	2 cut(s)	14, 948
EcoRV	GATATC	1 cut(s)	1984
EcoT14I	CCWWGG	2 cut(s)	2240, 2628
EcoT38I	GRGCYC	5 cut(s)	158, 248, 284, 464, 653
EgeI	GGCGCC	1 cut(s)	666
EheI	GGCGCC	1 cut(s)	666
ErhI	CCWWGG	2 cut(s)	2240, 2628
FaqI	GGGAC	3 cut(s)	1565, 1690, 2065
FauNDI	CATATG	2 cut(s)	778, 2756
FbaI	TGATCA	2 cut(s)	1513, 2200
FblI	GTMKAC	1 cut(s)	2158
FriOI	GRGCYC	5 cut(s)	158, 248, 284, 464, 653
FspBI	CTAG	7 cut(s)	200, 477, 549, 1260, 1425, 2025, 2241
GlaI	GCGC	3 cut(s)	292, 456, 666
GsaI	CCCAGC	4 cut(s)	251, 377, 461, 708
GsuI	CTGGAG	2 cut(s)	971, 1158
HaeII	RGCGCY	2 cut(s)	458, 668
HaeIII	GGCC	5 cut(s)	14, 156, 406, 481, 521
HapII	CCGG	7 cut(s)	152, 266, 482, 646, 1205, 1555, 1586
HgaI	GACGC	5 cut(s)	271, 303, 333, 354, 475
HhaI	GCGC	3 cut(s)	293, 457, 667
Hin1I	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
Hin6I	GCGC	3 cut(s)	291, 455, 665
HinP1I	GCGC	3 cut(s)	291, 455, 665
HpaII	CCGG	7 cut(s)	152, 266, 482, 646, 1205, 1555, 1586
Hpy166II	GTNNAC	7 cut(s)	318, 764, 845, 1006, 1257, 1500, 2159
Hpy8I	GTNNAC	7 cut(s)	318, 764, 845, 1006, 1257, 1500, 2159
Hpy99I	CGWCG	5 cut(s)	349, 370, 373, 491, 697
HpyAV	CCTTC	8 cut(s)	217, 226, 523, 645, 1728, 1776, 2172, 2539
HpyCH4III	ACNGT	3 cut(s)	1439, 2467, 2566
HpyCH4IV	ACGT	5 cut(s)	657, 1189, 1741, 1924, 2598
HpySE526I	ACGT	5 cut(s)	657, 1189, 1741, 1924, 2598
Hsp92I	GRCGYC	6 cut(s)	263, 344, 365, 486, 665, 1189
HspAI	GCGC	3 cut(s)	291, 455, 665
KasI	GGCGCC	1 cut(s)	664
KroI	GCCGGC	1 cut(s)	265
KroNI	GCCGGC	1 cut(s)	267
Ksp22I	TGATCA	2 cut(s)	1513, 2200
LmnI	GCTCC	6 cut(s)	68, 648, 1444, 1624, 2289, 2587
Lsp1109I	GCAGC	8 cut(s)	523, 601, 612, 1040, 1231, 1254, 1427, 2241
LweI	GCATC	7 cut(s)	601, 626, 1048, 1833, 1883, 2030, 2446
MaeI	CTAG	7 cut(s)	200, 477, 549, 1260, 1425, 2025, 2241
MaeII	ACGT	5 cut(s)	657, 1189, 1741, 1924, 2598
MaeIII	GTNAC	4 cut(s)	408, 728, 2035, 2072
MfeI	CAATTG	1 cut(s)	1881
MflI	RGATCY	2 cut(s)	1378, 2725
MhlI	GDGCHC	7 cut(s)	158, 248, 284, 464, 653, 847, 2485
Mly113I	GGCGCC	1 cut(s)	665
MmeI	TCCRAC	5 cut(s)	63, 72, 117, 1021, 1868
MreI	CGCCGGCG	1 cut(s)	265
MroNI	GCCGGC	1 cut(s)	265
MroXI	GAANNNNTTC	1 cut(s)	1574
MseI	TTAA	6 cut(s)	743, 836, 1391, 1620, 1704, 2739
MslI	CAYNNNNRTG	1 cut(s)	1232
MspA1I	CMGCKG	1 cut(s)	256
MspCI	CTTAAG	1 cut(s)	742
MspI	CCGG	7 cut(s)	152, 266, 482, 646, 1205, 1555, 1586
MspR9I	CCNGG	5 cut(s)	16, 153, 483, 950, 1206
MunI	CAATTG	1 cut(s)	1881
Mva1269I	GAATGC	1 cut(s)	1239
MvaI	CCWGG	2 cut(s)	16, 950
MvnI	CGCG	4 cut(s)	79, 278, 293, 673
NaeI	GCCGGC	1 cut(s)	267
NarI	GGCGCC	1 cut(s)	665
NciI	CCSGG	3 cut(s)	153, 483, 1206
NdeI	CATATG	2 cut(s)	778, 2756
NgoMIV	GCCGGC	1 cut(s)	265
NmuCI	GTSAC	3 cut(s)	728, 2035, 2072
NspI	RCATGY	1 cut(s)	2104
PaeR7I	CTCGAG	2 cut(s)	463, 933
PagI	TCATGA	1 cut(s)	1735
PcsI	WCGNNNNNNNCGW	2 cut(s)	155, 290
PctI	GAATGC	1 cut(s)	1239
PdiI	GCCGGC	1 cut(s)	267
PdmI	GAANNNNTTC	1 cut(s)	1574
PfeI	GAWTC	4 cut(s)	689, 1634, 2045, 2500
Ple19I	CGATCG	1 cut(s)	499
PluTI	GGCGCC	1 cut(s)	668
Psp124BI	GAGCTC	1 cut(s)	284
Psp1406I	AACGTT	1 cut(s)	1741
Psp6I	CCWGG	2 cut(s)	14, 948
PspFI	CCCAGC	4 cut(s)	247, 373, 457, 704
PspGI	CCWGG	2 cut(s)	14, 948
PspOMI	GGGCCC	1 cut(s)	154
PspPI	GGNCC	8 cut(s)	154, 155, 404, 519, 1552, 2079, 2189, 2632
PspXI	VCTCGAGB	2 cut(s)	463, 933
PstI	CTGCAG	1 cut(s)	2227
PstNI	CAGNNNCTG	2 cut(s)	704, 773
PsuI	RGATCY	2 cut(s)	1378, 2725
PvuI	CGATCG	1 cut(s)	499
PvuII	CAGCTG	1 cut(s)	256
RsaI	GTAC	4 cut(s)	163, 763, 1258, 2608
RsaNI	GTAC	4 cut(s)	162, 762, 1257, 2607
RseI	CAYNNNNRTG	1 cut(s)	1232
SacI	GAGCTC	1 cut(s)	284
SaqAI	TTAA	6 cut(s)	743, 836, 1391, 1620, 1704, 2739
Sau96I	GGNCC	8 cut(s)	154, 155, 404, 519, 1552, 2079, 2189, 2632
ScrFI	CCNGG	5 cut(s)	16, 153, 483, 950, 1206
SduI	GDGCHC	7 cut(s)	158, 248, 284, 464, 653, 847, 2485
SfaNI	GCATC	7 cut(s)	601, 626, 1048, 1833, 1883, 2030, 2446
SfcI	CTRYAG	2 cut(s)	2223, 2643
SfoI	GGCGCC	1 cut(s)	666
Sfr274I	CTCGAG	2 cut(s)	463, 933
SgrAI	CRCCGGYG	1 cut(s)	265
SinI	GGWCC	4 cut(s)	1552, 2079, 2189, 2632
SlaI	CTCGAG	2 cut(s)	463, 933
SmiMI	CAYNNNNRTG	1 cut(s)	1232
SmlI	CTYRAG	5 cut(s)	463, 742, 933, 1091, 2425
SmoI	CTYRAG	5 cut(s)	463, 742, 933, 1091, 2425
SspDI	GGCGCC	1 cut(s)	664
SspMI	CTAG	7 cut(s)	200, 477, 549, 1260, 1425, 2025, 2241
SstI	GAGCTC	1 cut(s)	284
StyD4I	CCNGG	5 cut(s)	14, 151, 481, 948, 1204
StyI	CCWWGG	2 cut(s)	2240, 2628
TaaI	ACNGT	3 cut(s)	1439, 2467, 2566
TaiI	ACGT	5 cut(s)	660, 1192, 1744, 1927, 2601
TaqI	TCGA	9 cut(s)	284, 464, 638, 934, 1114, 1231, 1689, 1891, 2389
TaqII	GACCGA	1 cut(s)	2649
TatI	WGTACW	2 cut(s)	761, 1256
TauI	GCSGC	6 cut(s)	177, 180, 183, 344, 495, 741
TfiI	GAWTC	4 cut(s)	689, 1634, 2045, 2500
Tru1I	TTAA	6 cut(s)	743, 836, 1391, 1620, 1704, 2739
Tru9I	TTAA	6 cut(s)	743, 836, 1391, 1620, 1704, 2739
TscAI	CASTG	2 cut(s)	520, 1160
TseFI	GTSAC	3 cut(s)	728, 2035, 2072
TseI	GCWGC	8 cut(s)	536, 600, 614, 1028, 1219, 1267, 1415, 2229
Tsp45I	GTSAC	3 cut(s)	728, 2035, 2072
TspRI	CASTG	2 cut(s)	520, 1160
Vha464I	CTTAAG	1 cut(s)	742
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	4 cut(s)	1552, 2079, 2189, 2632
XapI	RAATTY	9 cut(s)	895, 1044, 1356, 1430, 1492, 1528, 1574, 1616, 1872
XceI	RCATGY	1 cut(s)	2104
XcmI	CCANNNNNNNNNTGG	2 cut(s)	325, 1283
XhoI	CTCGAG	2 cut(s)	463, 933
XmaJI	CCTAGG	1 cut(s)	2240
XmiI	GTMKAC	1 cut(s)	2158
XmnI	GAANNNNTTC	1 cut(s)	1574
XspI	CTAG	7 cut(s)	200, 477, 549, 1260, 1425, 2025, 2241
ZraI	GACGTC	1 cut(s)	1190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.