SEC12-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52190 |
| fragaria_vesca | FvH4_7g06890 FvH4_7g06890 |
| malus_domestica | MD02G1241000.v1.1 MD07G1075600.v1.1 |
| prunus_persica | Prupe.2G096500_v2.0.a1 |
| pyrus_communis | pycom02g20620 pycom07g05960 |
| rosa_chinensis | RchiOBHm_Chr1g0336681 RchiOBHm_Chr1g0336701 RchiOBHm_Chr1g0336731 |
| rosa_laevigata | RLG00000029338 |
| rosa_multiflora | Rmu_sc0000907.1_g000011 Rmu_sc0011778.1_g000011 Rmu_sc0042619.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00315360 |
| rosa_rugosa | Rorug01G0127500 |
| rosa_samantha | Rh1CG140000 Rh1DG155600 |
| rosa_wichuraiana | Rw1G011990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 257 |
| Acc16I | TGCGCA | 1 cut(s) | 483 |
| AciI | CCGC | 9 cut(s) | 5, 42, 58, 233, 246, 414, 745, 1041, 1121 |
| AclWI | GGATC | 3 cut(s) | 46, 59, 403 |
| AcoI | YGGCCR | 2 cut(s) | 304, 446 |
| AcsI | RAATTY | 3 cut(s) | 435, 524, 855 |
| AcvI | CACGTG | 1 cut(s) | 39 |
| AfaI | GTAC | 2 cut(s) | 721, 940 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 353, 1127 |
| AgsI | TTSAA | 5 cut(s) | 203, 537, 626, 680, 899 |
| AjnI | CCWGG | 1 cut(s) | 95 |
| AleI | CACNNNNGTG | 2 cut(s) | 194, 370 |
| AluBI | AGCT | 6 cut(s) | 325, 380, 533, 571, 695, 959 |
| AluI | AGCT | 6 cut(s) | 325, 380, 533, 571, 695, 959 |
| Alw21I | GWGCWC | 2 cut(s) | 191, 240 |
| Alw26I | GTCTC | 1 cut(s) | 1152 |
| Alw44I | GTGCAC | 1 cut(s) | 236 |
| AlwI | GGATC | 3 cut(s) | 46, 59, 403 |
| Ama87I | CYCGRG | 1 cut(s) | 134 |
| AoxI | GGCC | 4 cut(s) | 59, 98, 304, 446 |
| ApaLI | GTGCAC | 1 cut(s) | 236 |
| ApoI | RAATTY | 3 cut(s) | 435, 524, 855 |
| AspLEI | GCGC | 1 cut(s) | 484 |
| AspS9I | GGNCC | 6 cut(s) | 15, 29, 60, 93, 362, 1178 |
| AsuHPI | GGTGA | 3 cut(s) | 227, 833, 976 |
| AvaI | CYCGRG | 1 cut(s) | 134 |
| AvaII | GGWCC | 5 cut(s) | 15, 29, 93, 362, 1178 |
| AxyI | CCTNAGG | 1 cut(s) | 102 |
| BaeGI | GKGCMC | 1 cut(s) | 240 |
| BalI | TGGCCA | 2 cut(s) | 306, 448 |
| BamHI | GGATCC | 1 cut(s) | 51 |
| BanII | GRGCYC | 1 cut(s) | 110 |
| BbrPI | CACGTG | 1 cut(s) | 39 |
| BbsI | GAAGAC | 2 cut(s) | 133, 1146 |
| Bbv12I | GWGCWC | 2 cut(s) | 191, 240 |
| BccI | CCATC | 6 cut(s) | 386, 416, 542, 572, 641, 812 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 217, 251 |
| BciT130I | CCWGG | 1 cut(s) | 97 |
| BcoDI | GTCTC | 1 cut(s) | 1152 |
| BfaI | CTAG | 2 cut(s) | 377, 515 |
| BfmI | CTRYAG | 1 cut(s) | 702 |
| BglII | AGATCT | 1 cut(s) | 1005 |
| BisI | GCNGC | 3 cut(s) | 59, 247, 746 |
| BlpI | GCTNAGC | 1 cut(s) | 553 |
| BlsI | GCNGC | 3 cut(s) | 60, 248, 747 |
| BmcAI | AGTACT | 1 cut(s) | 940 |
| Bme1390I | CCNGG | 1 cut(s) | 97 |
| Bme18I | GGWCC | 5 cut(s) | 15, 29, 93, 362, 1178 |
| BmeT110I | CYCGRG | 1 cut(s) | 134 |
| BmgT120I | GGNCC | 6 cut(s) | 15, 29, 60, 93, 362, 1178 |
| BmiI | GGNNCC | 4 cut(s) | 16, 30, 53, 1179 |
| BmrFI | CCNGG | 1 cut(s) | 97 |
| BmrI | ACTGGG | 1 cut(s) | 815 |
| BmsI | GCATC | 1 cut(s) | 1046 |
| BmuI | ACTGGG | 1 cut(s) | 815 |
| BpiI | GAAGAC | 2 cut(s) | 133, 1146 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 128, 160 |
| BpmI | CTGGAG | 1 cut(s) | 886 |
| Bpu10I | CCTNAGC | 1 cut(s) | 185 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 553 |
| BsaAI | YACGTR | 2 cut(s) | 39, 719 |
| BsaWI | WCCGGW | 1 cut(s) | 31 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 948, 978 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 353, 1127 |
| Bse118I | RCCGGY | 1 cut(s) | 633 |
| Bse1I | ACTGG | 5 cut(s) | 72, 415, 810, 869, 1181 |
| Bse21I | CCTNAGG | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 97 |
| BseGI | GGATG | 3 cut(s) | 427, 619, 1037 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 353, 1127 |
| BseMII | CTCAG | 2 cut(s) | 176, 567 |
| BseNI | ACTGG | 5 cut(s) | 72, 415, 810, 869, 1181 |
| BseRI | GAGGAG | 3 cut(s) | 163, 166, 336 |
| BseSI | GKGCMC | 1 cut(s) | 240 |
| BshFI | GGCC | 4 cut(s) | 61, 100, 306, 448 |
| BsiHKAI | GWGCWC | 2 cut(s) | 191, 240 |
| BsiHKCI | CYCGRG | 1 cut(s) | 134 |
| BsiSI | CCGG | 3 cut(s) | 32, 55, 634 |
| BslFI | GGGAC | 2 cut(s) | 664, 725 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 353, 1127 |
| BsmAI | GTCTC | 1 cut(s) | 1152 |
| BsmFI | GGGAC | 2 cut(s) | 664, 725 |
| BsmI | GAATGC | 1 cut(s) | 484 |
| BsnI | GGCC | 4 cut(s) | 61, 100, 306, 448 |
| BsoBI | CYCGRG | 1 cut(s) | 134 |
| Bsp1286I | GDGCHC | 3 cut(s) | 110, 191, 240 |
| Bsp143I | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 553 |
| BspACI | CCGC | 9 cut(s) | 5, 42, 58, 233, 246, 414, 745, 1041, 1121 |
| BspANI | GGCC | 4 cut(s) | 61, 100, 306, 448 |
| BspCNI | CTCAG | 2 cut(s) | 177, 566 |
| BspLI | GGNNCC | 4 cut(s) | 16, 30, 53, 1179 |
| BspMAI | CTGCAG | 1 cut(s) | 706 |
| BspPI | GGATC | 3 cut(s) | 46, 59, 403 |
| BsrFI | RCCGGY | 1 cut(s) | 633 |
| BsrI | ACTGG | 5 cut(s) | 72, 415, 810, 869, 1181 |
| BssAI | RCCGGY | 1 cut(s) | 633 |
| BssMI | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| Bst2UI | CCWGG | 1 cut(s) | 97 |
| Bst4CI | ACNGT | 2 cut(s) | 676, 979 |
| BstBAI | YACGTR | 2 cut(s) | 39, 719 |
| BstC8I | GCNNGC | 1 cut(s) | 455 |
| BstDEI | CTNAG | 6 cut(s) | 102, 185, 466, 553, 935, 969 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 351 |
| BstF5I | GGATG | 3 cut(s) | 427, 619, 1037 |
| BstHHI | GCGC | 1 cut(s) | 484 |
| BstKTI | GATC | 4 cut(s) | 22, 54, 398, 1008 |
| BstMAI | GTCTC | 1 cut(s) | 1152 |
| BstMBI | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 454, 701, 745, 1024 |
| BstNI | CCWGG | 1 cut(s) | 97 |
| BstSCI | CCNGG | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 1 cut(s) | 702 |
| BstSLI | GKGCMC | 1 cut(s) | 240 |
| BstSNI | TACGTA | 1 cut(s) | 719 |
| BstV2I | GAAGAC | 2 cut(s) | 133, 1146 |
| BstX2I | RGATCY | 3 cut(s) | 51, 395, 1005 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 79, 990 |
| BstYI | RGATCY | 3 cut(s) | 51, 395, 1005 |
| Bsu36I | CCTNAGG | 1 cut(s) | 102 |
| BsuRI | GGCC | 4 cut(s) | 61, 100, 306, 448 |
| BtsCI | GGATG | 3 cut(s) | 427, 619, 1037 |
| BtsI | GCAGTG | 1 cut(s) | 699 |
| BtsIMutI | CAGTG | 5 cut(s) | 672, 699, 803, 862, 1188 |
| Cac8I | GCNNGC | 1 cut(s) | 455 |
| CfoI | GCGC | 1 cut(s) | 484 |
| Cfr10I | RCCGGY | 1 cut(s) | 633 |
| Cfr13I | GGNCC | 6 cut(s) | 15, 29, 60, 93, 362, 1178 |
| Csp6I | GTAC | 2 cut(s) | 720, 939 |
| CviAII | CATG | 1 cut(s) | 723 |
| CviQI | GTAC | 2 cut(s) | 720, 939 |
| DdeI | CTNAG | 6 cut(s) | 102, 185, 466, 553, 935, 969 |
| DpnI | GATC | 4 cut(s) | 21, 53, 397, 1007 |
| DpnII | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 257 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 257 |
| EaeI | YGGCCR | 2 cut(s) | 304, 446 |
| Eco105I | TACGTA | 1 cut(s) | 719 |
| Eco147I | AGGCCT | 1 cut(s) | 100 |
| Eco24I | GRGCYC | 1 cut(s) | 110 |
| Eco47I | GGWCC | 5 cut(s) | 15, 29, 93, 362, 1178 |
| Eco72I | CACGTG | 1 cut(s) | 39 |
| Eco81I | CCTNAGG | 1 cut(s) | 102 |
| Eco88I | CYCGRG | 1 cut(s) | 134 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 351 |
| EcoRII | CCWGG | 1 cut(s) | 95 |
| EcoT38I | GRGCYC | 1 cut(s) | 110 |
| FaeI | CATG | 1 cut(s) | 726 |
| FaqI | GGGAC | 2 cut(s) | 664, 725 |
| FatI | CATG | 1 cut(s) | 722 |
| FauI | CCCGC | 1 cut(s) | 35 |
| FauNDI | CATATG | 1 cut(s) | 193 |
| Fnu4HI | GCNGC | 3 cut(s) | 59, 247, 746 |
| FokI | GGATG | 3 cut(s) | 434, 626, 1024 |
| FriOI | GRGCYC | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 3 cut(s) | 59, 247, 746 |
| FspAI | RTGCGCAY | 1 cut(s) | 483 |
| FspBI | CTAG | 2 cut(s) | 377, 515 |
| FspI | TGCGCA | 1 cut(s) | 483 |
| GlaI | GCGC | 1 cut(s) | 483 |
| GluI | GCNGC | 3 cut(s) | 59, 247, 746 |
| GsuI | CTGGAG | 1 cut(s) | 886 |
| HaeIII | GGCC | 4 cut(s) | 61, 100, 306, 448 |
| HapII | CCGG | 3 cut(s) | 32, 55, 634 |
| HhaI | GCGC | 1 cut(s) | 484 |
| Hin1II | CATG | 1 cut(s) | 726 |
| Hin6I | GCGC | 1 cut(s) | 482 |
| HinP1I | GCGC | 1 cut(s) | 482 |
| HincII | GTYRAC | 1 cut(s) | 975 |
| HindII | GTYRAC | 1 cut(s) | 975 |
| HindIII | AAGCTT | 1 cut(s) | 693 |
| HinfI | GANTC | 5 cut(s) | 311, 357, 601, 1076, 1145 |
| HpaI | GTTAAC | 1 cut(s) | 975 |
| HpaII | CCGG | 3 cut(s) | 32, 55, 634 |
| HphI | GGTGA | 3 cut(s) | 227, 833, 976 |
| Hpy166II | GTNNAC | 3 cut(s) | 238, 365, 975 |
| Hpy188I | TCNGA | 4 cut(s) | 19, 613, 1075, 1159 |
| Hpy188III | TCNNGA | 3 cut(s) | 88, 134, 350 |
| Hpy8I | GTNNAC | 3 cut(s) | 238, 365, 975 |
| Hpy99I | CGWCG | 1 cut(s) | 254 |
| HpyAV | CCTTC | 3 cut(s) | 123, 157, 347 |
| HpyCH4III | ACNGT | 2 cut(s) | 676, 979 |
| HpyCH4IV | ACGT | 2 cut(s) | 38, 718 |
| HpyCH4V | TGCA | 6 cut(s) | 238, 285, 320, 672, 704, 803 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 454, 701, 745, 1024 |
| HpyF3I | CTNAG | 6 cut(s) | 102, 185, 466, 553, 935, 969 |
| HpySE526I | ACGT | 2 cut(s) | 38, 718 |
| Hsp92II | CATG | 1 cut(s) | 726 |
| HspAI | GCGC | 1 cut(s) | 482 |
| KspAI | GTTAAC | 1 cut(s) | 975 |
| Kzo9I | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| LmnI | GCTCC | 2 cut(s) | 956, 1130 |
| LweI | GCATC | 1 cut(s) | 1046 |
| MaeI | CTAG | 2 cut(s) | 377, 515 |
| MaeII | ACGT | 2 cut(s) | 38, 718 |
| MaeIII | GTNAC | 2 cut(s) | 34, 964 |
| MalI | GATC | 4 cut(s) | 21, 53, 397, 1007 |
| MboI | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| MboII | GAAGA | 9 cut(s) | 108, 111, 114, 133, 215, 587, 1051, 1113, 1146 |
| MflI | RGATCY | 3 cut(s) | 51, 395, 1005 |
| MhlI | GDGCHC | 3 cut(s) | 110, 191, 240 |
| MlsI | TGGCCA | 2 cut(s) | 306, 448 |
| MluCI | AATT | 7 cut(s) | 287, 401, 435, 524, 732, 855, 1124 |
| MluNI | TGGCCA | 2 cut(s) | 306, 448 |
| MlyI | GAGTC | 2 cut(s) | 595, 1154 |
| MmeI | TCCRAC | 1 cut(s) | 941 |
| Mox20I | TGGCCA | 2 cut(s) | 306, 448 |
| MscI | TGGCCA | 2 cut(s) | 306, 448 |
| MseI | TTAA | 4 cut(s) | 753, 843, 974, 1139 |
| MslI | CAYNNNNRTG | 2 cut(s) | 194, 370 |
| Msp20I | TGGCCA | 2 cut(s) | 306, 448 |
| MspA1I | CMGCKG | 1 cut(s) | 1043 |
| MspI | CCGG | 3 cut(s) | 32, 55, 634 |
| MspR9I | CCNGG | 1 cut(s) | 97 |
| Mva1269I | GAATGC | 1 cut(s) | 484 |
| MvaI | CCWGG | 1 cut(s) | 97 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 454, 701, 745, 1024 |
| NdeI | CATATG | 1 cut(s) | 193 |
| NdeII | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| NlaIII | CATG | 1 cut(s) | 726 |
| NlaIV | GGNNCC | 4 cut(s) | 16, 30, 53, 1179 |
| NmuCI | GTSAC | 2 cut(s) | 34, 964 |
| NsbI | TGCGCA | 1 cut(s) | 483 |
| OliI | CACNNNNGTG | 2 cut(s) | 194, 370 |
| PaeR7I | CTCGAG | 1 cut(s) | 134 |
| PceI | AGGCCT | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 44 |
| PctI | GAATGC | 1 cut(s) | 484 |
| PfeI | GAWTC | 3 cut(s) | 311, 357, 1076 |
| PflFI | GACNNNGTC | 1 cut(s) | 257 |
| PkrI | GCNGC | 3 cut(s) | 60, 248, 747 |
| PleI | GAGTC | 2 cut(s) | 595, 1153 |
| PmaCI | CACGTG | 1 cut(s) | 39 |
| PmlI | CACGTG | 1 cut(s) | 39 |
| PpsI | GAGTC | 2 cut(s) | 595, 1153 |
| Ppu21I | YACGTR | 2 cut(s) | 39, 719 |
| Psp6I | CCWGG | 1 cut(s) | 95 |
| PspCI | CACGTG | 1 cut(s) | 39 |
| PspGI | CCWGG | 1 cut(s) | 95 |
| PspN4I | GGNNCC | 4 cut(s) | 16, 30, 53, 1179 |
| PspPI | GGNCC | 6 cut(s) | 15, 29, 60, 93, 362, 1178 |
| PstI | CTGCAG | 1 cut(s) | 706 |
| PsuI | RGATCY | 3 cut(s) | 51, 395, 1005 |
| PsyI | GACNNNGTC | 1 cut(s) | 257 |
| RsaI | GTAC | 2 cut(s) | 721, 940 |
| RsaNI | GTAC | 2 cut(s) | 720, 939 |
| RseI | CAYNNNNRTG | 2 cut(s) | 194, 370 |
| SaqAI | TTAA | 4 cut(s) | 753, 843, 974, 1139 |
| SatI | GCNGC | 3 cut(s) | 59, 247, 746 |
| Sau3AI | GATC | 4 cut(s) | 19, 51, 395, 1005 |
| Sau96I | GGNCC | 6 cut(s) | 15, 29, 60, 93, 362, 1178 |
| ScaI | AGTACT | 1 cut(s) | 940 |
| SchI | GAGTC | 2 cut(s) | 595, 1154 |
| ScrFI | CCNGG | 1 cut(s) | 97 |
| SduI | GDGCHC | 3 cut(s) | 110, 191, 240 |
| SfaNI | GCATC | 1 cut(s) | 1046 |
| SfcI | CTRYAG | 1 cut(s) | 702 |
| Sfr274I | CTCGAG | 1 cut(s) | 134 |
| SinI | GGWCC | 5 cut(s) | 15, 29, 93, 362, 1178 |
| SlaI | CTCGAG | 1 cut(s) | 134 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 194, 370 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| SnaBI | TACGTA | 1 cut(s) | 719 |
| Sse9I | AATT | 7 cut(s) | 287, 401, 435, 524, 732, 855, 1124 |
| SseBI | AGGCCT | 1 cut(s) | 100 |
| SsiI | CCGC | 9 cut(s) | 5, 42, 58, 233, 246, 414, 745, 1041, 1121 |
| SspI | AATATT | 1 cut(s) | 1171 |
| SspMI | CTAG | 2 cut(s) | 377, 515 |
| StuI | AGGCCT | 1 cut(s) | 100 |
| StyD4I | CCNGG | 1 cut(s) | 95 |
| TaaI | ACNGT | 2 cut(s) | 676, 979 |
| TaiI | ACGT | 2 cut(s) | 41, 721 |
| TaqI | TCGA | 3 cut(s) | 135, 150, 227 |
| TaqII | GACCGA | 1 cut(s) | 350 |
| TasI | AATT | 7 cut(s) | 287, 401, 435, 524, 732, 855, 1124 |
| TatI | WGTACW | 1 cut(s) | 938 |
| TauI | GCSGC | 3 cut(s) | 61, 249, 748 |
| TfiI | GAWTC | 3 cut(s) | 311, 357, 1076 |
| Tru1I | TTAA | 4 cut(s) | 753, 843, 974, 1139 |
| Tru9I | TTAA | 4 cut(s) | 753, 843, 974, 1139 |
| TscAI | CASTG | 5 cut(s) | 679, 706, 810, 869, 1188 |
| TseFI | GTSAC | 2 cut(s) | 34, 964 |
| Tsp45I | GTSAC | 2 cut(s) | 34, 964 |
| TspDTI | ATGAA | 3 cut(s) | 486, 630, 1068 |
| TspGWI | ACGGA | 1 cut(s) | 1140 |
| TspRI | CASTG | 5 cut(s) | 679, 706, 810, 869, 1188 |
| Tth111I | GACNNNGTC | 1 cut(s) | 257 |
| VneI | GTGCAC | 1 cut(s) | 236 |
| VpaK11BI | GGWCC | 5 cut(s) | 15, 29, 93, 362, 1178 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 351 |
| XapI | RAATTY | 3 cut(s) | 435, 524, 855 |
| XhoI | CTCGAG | 1 cut(s) | 134 |
| XspI | CTAG | 2 cut(s) | 377, 515 |
| ZrmI | AGTACT | 1 cut(s) | 940 |