Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0010850

Physical Location & Seq

Genomic Coordinates Reverse (-)

26892486 .. 26896705

Gene Structure 4220 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G011990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGAGGGAGGCGGGTCGGAGCAGCAGGGTACAGTGACGTGCGGGTCGTGGATCCGGCGACCCGAGAACATGAATTGGGTGGTGTTCGGGAGGTCCAGGGGTAAAGAAGACTCCAGTTCAGTTCTGACCATCTTCTCCTTCGACCCCAAGACCACTTGTCTCTCTTCCTCTCCTCTGGCCACTTATGTGTTTGAAGCGGTGGACGGTGATCCTGTTTCGATTGCGGTGCACCCCAGCGGGGACGACGTCGTTTGCTCCACCTCCAATGGTGGCTGCAAATTGTTTGAGTTATATGGGCCAGAATCAAATGCCAAGCTGTTGGCAAGAGAATCAGCTCCTTTGCAAGGAATTGGTCCACAGAAGTGTCTAGCTTTTAGTGTCGATGGATCTAAGTTGGCTACCGGTGGTTTGGATGGGCATATGAGAATTCTGGAGTGGCCAAGCCTGTCCATAATTTTAGATGAACCTAAGGCACATAAATCTGTCCGTGATATGGATTTCAGTTTAGACTCAGAGTTCTTAGCTTCGACATCTACTGATGGCTCAGCGAGAATATGGAAGACGGAAGATGGTGTTCCTGTGACTACTTTGACTCGCGACTCAGATGAAAAGATTGAACTCTGTTGCTTTTCTAAGGATGGGACAAAACCCTTTCTATTTTGCACAGTTCAAAAAGGTGCAAAAGCTTTAACTTCAGTCTGGGACATAAGTACATGGAAGAAAATTGGACATAAAAGGCTTCTTAAAAAGTCTGCTGCTGTTATGTCTGTCAGCAAGGATGGAAAATATCTTGCTGTAAATGGAGATATATGTGTGGTTGAAGTTAAGAAAATGGAGATTTGCCACTGGAGTAAGAGGCTACACCTGGGAACTTGCATTGCCACTCTAGACTTCTGTCCCACTGAAAGGGTTGTGCTCACCACCTCTAGTGAATGGGGAGCTGTGGTGACCAAGTTAAATGTTCCTGCAGATTGGAAAGAATGGCAGATCTATTTGTTGCTTTTAGGGCTGTTTTTGGCGTCCGCCGTTGCATTTTATATCTTCTTTGAGAAGTCTGATAATTTTTGGAACTTCCCTCTTGGAAAAAATCAACCAGCAAGACCTGAATTCGGGGCATTTCTAAAAGATTCACAGCCTTCTGACGATAGAAACATTTGGGGTCCTGTAGACATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002790 GO:0003400 GO:0003674 GO:0005085 GO:0005090 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006888 GO:0006950 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0009267 GO:0009306 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015698 GO:0015833 GO:0016020 GO:0016021 GO:0016036 GO:0016192 GO:0019899 GO:0030176 GO:0030234 GO:0030695 GO:0031224 GO:0031227 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032386 GO:0032879 GO:0032940 GO:0033036 GO:0033043 GO:0033554 GO:0042175 GO:0042594 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043547 GO:0044087 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048209 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0060589 GO:0060627 GO:0060628 GO:0065007 GO:0065009 GO:0071496 GO:0071702 GO:0071705 GO:0071944 GO:0090113 GO:0098772 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

WD40

Protein Analysis

391

Amino Acids

42.98

Weight (kDa)

5.79

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	61 - 214	2.5e-09	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	65 - 268	1.2e-07	WDR3 second beta-propeller domain
WDR55	PF24796	69 - 259	4.3e-09	WDR55
Beta-prop_THOC3	PF25174	73 - 305	2.8e-18	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	73 - 209	4.1e-08	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	74 - 215	6.6e-11	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	74 - 304	2.8e-15	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	122 - 311	2.5e-14	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	123 - 266	1.7e-06	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	157 - 310	1.2e-06	Prp19 WD40 domain
WD40	PF00400	157 - 186	5.8e-06	WD domain, G-beta repeat
EIF3I	PF24805	161 - 317	7.5e-07	EIF3I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0010850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52190
fragaria_vesca	FvH4_7g06890 FvH4_7g06890
malus_domestica	MD02G1241000.v1.1 MD07G1075600.v1.1
prunus_persica	Prupe.2G096500_v2.0.a1
pyrus_communis	pycom02g20620 pycom07g05960
rosa_chinensis	RchiOBHm_Chr1g0336681 RchiOBHm_Chr1g0336701 RchiOBHm_Chr1g0336731
rosa_laevigata	RLG00000029338
rosa_multiflora	Rmu_sc0000907.1_g000011 Rmu_sc0011778.1_g000011 Rmu_sc0042619.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315360
rosa_rugosa	Rorug01G0127500
rosa_samantha	Rh1CG140000 Rh1DG155600
rosa_wichuraiana	Rw1G011990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	43
AatII	GACGTC	1 cut(s)	249
AccI	GTMKAC	1 cut(s)	1167
AccII	CGCG	1 cut(s)	597
AciI	CCGC	6 cut(s)	12, 42, 197, 224, 237, 1023
AclWI	GGATC	4 cut(s)	46, 59, 203, 394
AcoI	YGGCCR	2 cut(s)	177, 437
AcsI	RAATTY	2 cut(s)	426, 1106
AcuI	CTGAAG	1 cut(s)	678
AcyI	GRCGYC	2 cut(s)	246, 1019
AfaI	GTAC	2 cut(s)	31, 712
AfiI	CCNNNNNNNGG	5 cut(s)	238, 344, 493, 906, 1109
AflIII	ACRYGT	1 cut(s)	1170
AgeI	ACCGGT	1 cut(s)	401
AgsI	TTSAA	4 cut(s)	194, 617, 671, 821
AhdI	GACNNNNNGTC	1 cut(s)	156
AjiI	CACGTC	1 cut(s)	39
AjnI	CCWGG	2 cut(s)	95, 864
AleI	CACNNNNGTG	2 cut(s)	185, 361
AluBI	AGCT	6 cut(s)	316, 335, 371, 524, 686, 941
AluI	AGCT	6 cut(s)	316, 335, 371, 524, 686, 941
Alw21I	GWGCWC	2 cut(s)	231, 918
Alw26I	GTCTC	1 cut(s)	164
Alw44I	GTGCAC	1 cut(s)	227
AlwI	GGATC	4 cut(s)	46, 59, 203, 394
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	3 cut(s)	177, 296, 437
ApaLI	GTGCAC	1 cut(s)	227
ApeKI	GCWGC	3 cut(s)	22, 273, 755
ApoI	RAATTY	2 cut(s)	426, 1106
AsiGI	ACCGGT	1 cut(s)	401
AspS9I	GGNCC	4 cut(s)	93, 296, 353, 1160
AsuHPI	GGTGA	3 cut(s)	218, 910, 958
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	3 cut(s)	93, 353, 1160
AxyI	CCTNAGG	1 cut(s)	468
BaeGI	GKGCMC	1 cut(s)	231
BalI	TGGCCA	2 cut(s)	179, 439
BamHI	GGATCC	1 cut(s)	51
BbsI	GAAGAC	2 cut(s)	114, 566
Bbv12I	GWGCWC	2 cut(s)	231, 918
BbvI	GCAGC	3 cut(s)	34, 260, 742
BccI	CCATC	7 cut(s)	137, 377, 407, 533, 563, 632, 773
BceAI	ACGGC	1 cut(s)	1010
BcgI	CGANNNNNNTGC	2 cut(s)	208, 242
BciT130I	CCWGG	2 cut(s)	97, 866
BcoDI	GTCTC	1 cut(s)	164
BfaI	CTAG	3 cut(s)	368, 887, 927
BfmI	CTRYAG	2 cut(s)	966, 1164
BglII	AGATCT	1 cut(s)	987
BisI	GCNGC	3 cut(s)	23, 274, 756
BlpI	GCTNAGC	1 cut(s)	544
BlsI	GCNGC	3 cut(s)	24, 275, 757
Bme1390I	CCNGG	2 cut(s)	97, 866
Bme18I	GGWCC	3 cut(s)	93, 353, 1160
BmeRI	GACNNNNNGTC	1 cut(s)	156
BmeT110I	CYCGRG	1 cut(s)	62
BmgBI	CACGTC	1 cut(s)	39
BmgT120I	GGNCC	4 cut(s)	93, 296, 353, 1160
BmiI	GGNNCC	2 cut(s)	53, 1161
BmrFI	CCNGG	2 cut(s)	97, 866
BoxI	GACNNNNGTC	1 cut(s)	894
BpiI	GAAGAC	2 cut(s)	114, 566
BpmI	CTGGAG	3 cut(s)	97, 452, 868
Bpu1102I	GCTNAGC	1 cut(s)	544
BsaHI	GRCGYC	2 cut(s)	246, 1019
BsaJI	CCNNGG	2 cut(s)	96, 865
BsaWI	WCCGGW	1 cut(s)	401
BsaXI	ACNNNNNCTCC	2 cut(s)	930, 960
Bsc4I	CCNNNNNNNGG	5 cut(s)	238, 344, 493, 906, 1109
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	2 cut(s)	114, 851
Bse21I	CCTNAGG	1 cut(s)	468
Bse3DI	GCAATG	1 cut(s)	876
BseBI	CCWGG	2 cut(s)	97, 866
BseDI	CCNNGG	2 cut(s)	96, 865
BseGI	GGATG	3 cut(s)	418, 643, 784
BseLI	CCNNNNNNNGG	5 cut(s)	238, 344, 493, 906, 1109
BseMI	GCAATG	1 cut(s)	876
BseMII	CTCAG	3 cut(s)	525, 558, 615
BseNI	ACTGG	2 cut(s)	114, 851
BseRI	GAGGAG	1 cut(s)	162
BseSI	GKGCMC	1 cut(s)	231
BseXI	GCAGC	3 cut(s)	34, 260, 742
BseYI	CCCAGC	1 cut(s)	233
Bsh1236I	CGCG	1 cut(s)	597
BshFI	GGCC	3 cut(s)	179, 298, 439
BshTI	ACCGGT	1 cut(s)	401
BsiHKAI	GWGCWC	2 cut(s)	231, 918
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	2 cut(s)	55, 402
BslFI	GGGAC	4 cut(s)	254, 655, 716, 882
BslI	CCNNNNNNNGG	5 cut(s)	238, 344, 493, 906, 1109
BsmAI	GTCTC	1 cut(s)	164
BsmFI	GGGAC	4 cut(s)	254, 655, 716, 882
BsnI	GGCC	3 cut(s)	179, 298, 439
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	2 cut(s)	231, 918
Bsp143I	GATC	4 cut(s)	51, 208, 386, 987
Bsp1720I	GCTNAGC	1 cut(s)	544
Bsp68I	TCGCGA	1 cut(s)	597
BspACI	CCGC	6 cut(s)	12, 42, 197, 224, 237, 1023
BspANI	GGCC	3 cut(s)	179, 298, 439
BspCNI	CTCAG	3 cut(s)	524, 557, 614
BspFNI	CGCG	1 cut(s)	597
BspLI	GGNNCC	2 cut(s)	53, 1161
BspMAI	CTGCAG	1 cut(s)	970
BspPI	GGATC	4 cut(s)	46, 59, 203, 394
BsrDI	GCAATG	1 cut(s)	876
BsrFI	RCCGGY	1 cut(s)	401
BsrI	ACTGG	2 cut(s)	114, 851
BssAI	RCCGGY	1 cut(s)	401
BssECI	CCNNGG	2 cut(s)	96, 865
BssMI	GATC	4 cut(s)	51, 208, 386, 987
BssNI	GRCGYC	2 cut(s)	246, 1019
Bst2UI	CCWGG	2 cut(s)	97, 866
Bst4CI	ACNGT	3 cut(s)	34, 206, 667
Bst6I	CTCTTC	1 cut(s)	169
BstACI	GRCGYC	2 cut(s)	246, 1019
BstDEI	CTNAG	7 cut(s)	390, 468, 511, 520, 544, 601, 633
BstEII	GGTNACC	1 cut(s)	946
BstENI	CCTNNNNNAGG	1 cut(s)	342
BstF5I	GGATG	3 cut(s)	418, 643, 784
BstFNI	CGCG	1 cut(s)	597
BstKTI	GATC	4 cut(s)	54, 211, 389, 990
BstMAI	GTCTC	1 cut(s)	164
BstMBI	GATC	4 cut(s)	51, 208, 386, 987
BstMWI	GCNNNNNNNGC	1 cut(s)	1006
BstNI	CCWGG	2 cut(s)	97, 866
BstNSI	RCATGY	1 cut(s)	1174
BstPAI	GACNNNNGTC	1 cut(s)	894
BstPI	GGTNACC	1 cut(s)	946
BstSCI	CCNGG	2 cut(s)	95, 864
BstSFI	CTRYAG	2 cut(s)	966, 1164
BstSLI	GKGCMC	1 cut(s)	231
BstUI	CGCG	1 cut(s)	597
BstV1I	GCAGC	3 cut(s)	34, 260, 742
BstV2I	GAAGAC	2 cut(s)	114, 566
BstX2I	RGATCY	3 cut(s)	51, 386, 987
BstXI	CCANNNNNNTGG	1 cut(s)	319
BstYI	RGATCY	3 cut(s)	51, 386, 987
Bsu36I	CCTNAGG	1 cut(s)	468
BsuRI	GGCC	3 cut(s)	179, 298, 439
BtrI	CACGTC	1 cut(s)	39
BtsCI	GGATG	3 cut(s)	418, 643, 784
BtsIMutI	CAGTG	3 cut(s)	39, 844, 900
BtuMI	TCGCGA	1 cut(s)	597
Cfr10I	RCCGGY	1 cut(s)	401
Cfr13I	GGNCC	4 cut(s)	93, 296, 353, 1160
CseI	GACGC	1 cut(s)	1008
Csp6I	GTAC	2 cut(s)	30, 711
CspAI	ACCGGT	1 cut(s)	401
CviAII	CATG	3 cut(s)	70, 714, 1171
CviQI	GTAC	2 cut(s)	30, 711
DdeI	CTNAG	7 cut(s)	390, 468, 511, 520, 544, 601, 633
DpnI	GATC	4 cut(s)	53, 210, 388, 989
DpnII	GATC	4 cut(s)	51, 208, 386, 987
DrdI	GACNNNNNNGTC	1 cut(s)	43
DriI	GACNNNNNGTC	1 cut(s)	156
DseDI	GACNNNNNNGTC	1 cut(s)	43
EaeI	YGGCCR	2 cut(s)	177, 437
Eam1104I	CTCTTC	1 cut(s)	169
Eam1105I	GACNNNNNGTC	1 cut(s)	156
EarI	CTCTTC	1 cut(s)	169
EciI	GGCGGA	1 cut(s)	1012
Eco47I	GGWCC	3 cut(s)	93, 353, 1160
Eco57I	CTGAAG	1 cut(s)	678
Eco81I	CCTNAGG	1 cut(s)	468
Eco88I	CYCGRG	1 cut(s)	62
Eco91I	GGTNACC	1 cut(s)	946
EcoNI	CCTNNNNNAGG	1 cut(s)	342
EcoO109I	RGGNCCY	1 cut(s)	1160
EcoO65I	GGTNACC	1 cut(s)	946
EcoRI	GAATTC	2 cut(s)	426, 1106
EcoRII	CCWGG	2 cut(s)	95, 864
FaeI	CATG	3 cut(s)	73, 717, 1174
FaqI	GGGAC	4 cut(s)	254, 655, 716, 882
FatI	CATG	3 cut(s)	69, 713, 1170
FauI	CCCGC	3 cut(s)	5, 35, 230
FauNDI	CATATG	1 cut(s)	420
FblI	GTMKAC	1 cut(s)	1167
Fnu4HI	GCNGC	3 cut(s)	23, 274, 756
FokI	GGATG	3 cut(s)	425, 650, 791
Fsp4HI	GCNGC	3 cut(s)	23, 274, 756
FspBI	CTAG	3 cut(s)	368, 887, 927
GluI	GCNGC	3 cut(s)	23, 274, 756
GsaI	CCCAGC	1 cut(s)	237
GsuI	CTGGAG	3 cut(s)	97, 452, 868
HaeIII	GGCC	3 cut(s)	179, 298, 439
HapII	CCGG	2 cut(s)	55, 402
HgaI	GACGC	1 cut(s)	1008
Hin1I	GRCGYC	2 cut(s)	246, 1019
Hin1II	CATG	3 cut(s)	73, 717, 1174
HindIII	AAGCTT	1 cut(s)	684
HinfI	GANTC	7 cut(s)	110, 302, 329, 509, 592, 599, 1127
HpaII	CCGG	2 cut(s)	55, 402
HphI	GGTGA	3 cut(s)	218, 910, 958
Hpy166II	GTNNAC	4 cut(s)	202, 229, 356, 1168
Hpy188I	TCNGA	6 cut(s)	19, 126, 514, 604, 1057, 1141
Hpy188III	TCNNGA	4 cut(s)	88, 431, 596, 887
Hpy8I	GTNNAC	4 cut(s)	202, 229, 356, 1168
Hpy99I	CGWCG	2 cut(s)	248, 251
HpyAV	CCTTC	2 cut(s)	148, 1146
HpyCH4III	ACNGT	3 cut(s)	34, 206, 667
HpyCH4IV	ACGT	2 cut(s)	38, 246
HpyCH4V	TGCA	8 cut(s)	229, 276, 343, 663, 680, 876, 968, 1031
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1006
HpyF3I	CTNAG	7 cut(s)	390, 468, 511, 520, 544, 601, 633
HpySE526I	ACGT	2 cut(s)	38, 246
Hsp92I	GRCGYC	2 cut(s)	246, 1019
Hsp92II	CATG	3 cut(s)	73, 717, 1174
Kzo9I	GATC	4 cut(s)	51, 208, 386, 987
LmnI	GCTCC	4 cut(s)	19, 260, 340, 938
Lsp1109I	GCAGC	3 cut(s)	34, 260, 742
MaeI	CTAG	3 cut(s)	368, 887, 927
MaeII	ACGT	2 cut(s)	38, 246
MaeIII	GTNAC	3 cut(s)	34, 580, 946
MalI	GATC	4 cut(s)	53, 210, 388, 989
MboI	GATC	4 cut(s)	51, 208, 386, 987
MboII	GAAGA	7 cut(s)	119, 124, 156, 571, 578, 730, 1033
MflI	RGATCY	3 cut(s)	51, 386, 987
MhlI	GDGCHC	2 cut(s)	231, 918
MlsI	TGGCCA	2 cut(s)	179, 439
MluCI	AATT	8 cut(s)	73, 278, 348, 426, 453, 723, 1060, 1106
MluNI	TGGCCA	2 cut(s)	179, 439
MlyI	GAGTC	4 cut(s)	104, 503, 586, 593
MnlI	CCTC	7 cut(s)	84, 178, 183, 271, 849, 934, 1086
Mox20I	TGGCCA	2 cut(s)	179, 439
MscI	TGGCCA	2 cut(s)	179, 439
MseI	TTAA	4 cut(s)	689, 744, 825, 956
MslI	CAYNNNNRTG	2 cut(s)	185, 361
Msp20I	TGGCCA	2 cut(s)	179, 439
MspA1I	CMGCKG	1 cut(s)	237
MspI	CCGG	2 cut(s)	55, 402
MspR9I	CCNGG	2 cut(s)	97, 866
MvaI	CCWGG	2 cut(s)	97, 866
MvnI	CGCG	1 cut(s)	597
MwoI	GCNNNNNNNGC	1 cut(s)	1006
NdeI	CATATG	1 cut(s)	420
NdeII	GATC	4 cut(s)	51, 208, 386, 987
NlaIII	CATG	3 cut(s)	73, 717, 1174
NlaIV	GGNNCC	2 cut(s)	53, 1161
NmuCI	GTSAC	3 cut(s)	34, 580, 946
NruI	TCGCGA	1 cut(s)	597
NspI	RCATGY	1 cut(s)	1174
OliI	CACNNNNGTG	2 cut(s)	185, 361
PciI	ACATGT	1 cut(s)	1170
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PfeI	GAWTC	3 cut(s)	302, 329, 1127
PflFI	GACNNNGTC	1 cut(s)	245
PinAI	ACCGGT	1 cut(s)	401
PkrI	GCNGC	3 cut(s)	24, 275, 757
PleI	GAGTC	4 cut(s)	104, 503, 586, 593
PpsI	GAGTC	4 cut(s)	104, 503, 586, 593
PpuMI	RGGWCCY	1 cut(s)	1160
PscI	ACATGT	1 cut(s)	1170
PshAI	GACNNNNGTC	1 cut(s)	894
Psp5II	RGGWCCY	1 cut(s)	1160
Psp6I	CCWGG	2 cut(s)	95, 864
PspEI	GGTNACC	1 cut(s)	946
PspFI	CCCAGC	1 cut(s)	233
PspGI	CCWGG	2 cut(s)	95, 864
PspN4I	GGNNCC	2 cut(s)	53, 1161
PspPI	GGNCC	4 cut(s)	93, 296, 353, 1160
PspPPI	RGGWCCY	1 cut(s)	1160
PstI	CTGCAG	1 cut(s)	970
PsuI	RGATCY	3 cut(s)	51, 386, 987
PsyI	GACNNNGTC	1 cut(s)	245
RruI	TCGCGA	1 cut(s)	597
RsaI	GTAC	2 cut(s)	31, 712
RsaNI	GTAC	2 cut(s)	30, 711
RseI	CAYNNNNRTG	2 cut(s)	185, 361
SaqAI	TTAA	4 cut(s)	689, 744, 825, 956
SatI	GCNGC	3 cut(s)	23, 274, 756
Sau3AI	GATC	4 cut(s)	51, 208, 386, 987
Sau96I	GGNCC	4 cut(s)	93, 296, 353, 1160
SchI	GAGTC	4 cut(s)	104, 503, 586, 593
ScrFI	CCNGG	2 cut(s)	97, 866
SduI	GDGCHC	2 cut(s)	231, 918
SfcI	CTRYAG	2 cut(s)	966, 1164
SinI	GGWCC	3 cut(s)	93, 353, 1160
SmiMI	CAYNNNNRTG	2 cut(s)	185, 361
Sse9I	AATT	8 cut(s)	73, 278, 348, 426, 453, 723, 1060, 1106
SsiI	CCGC	6 cut(s)	12, 42, 197, 224, 237, 1023
SspMI	CTAG	3 cut(s)	368, 887, 927
StyD4I	CCNGG	2 cut(s)	95, 864
TaaI	ACNGT	3 cut(s)	34, 206, 667
TaiI	ACGT	2 cut(s)	41, 249
TaqI	TCGA	4 cut(s)	141, 218, 381, 527
TasI	AATT	8 cut(s)	73, 278, 348, 426, 453, 723, 1060, 1106
TatI	WGTACW	1 cut(s)	710
TfiI	GAWTC	3 cut(s)	302, 329, 1127
Tru1I	TTAA	4 cut(s)	689, 744, 825, 956
Tru9I	TTAA	4 cut(s)	689, 744, 825, 956
TscAI	CASTG	3 cut(s)	39, 851, 907
TseFI	GTSAC	3 cut(s)	34, 580, 946
TseI	GCWGC	3 cut(s)	22, 273, 755
Tsp45I	GTSAC	3 cut(s)	34, 580, 946
TspDTI	ATGAA	3 cut(s)	86, 477, 621
TspGWI	ACGGA	2 cut(s)	476, 578
TspRI	CASTG	3 cut(s)	39, 851, 907
Tth111I	GACNNNGTC	1 cut(s)	245
VneI	GTGCAC	1 cut(s)	227
VpaK11BI	GGWCC	3 cut(s)	93, 353, 1160
XagI	CCTNNNNNAGG	1 cut(s)	342
XapI	RAATTY	2 cut(s)	426, 1106
XbaI	TCTAGA	1 cut(s)	886
XceI	RCATGY	1 cut(s)	1174
XmiI	GTMKAC	1 cut(s)	1167
XspI	CTAG	3 cut(s)	368, 887, 927
ZraI	GACGTC	1 cut(s)	247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.