Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0010850

Physical Location & Seq

Genomic Coordinates Forward (+)

39626911 .. 39631322

Gene Structure 4412 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00315360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGAGGGAGCCGGGTCGGAGCAACAGAGGACAGTGACGTGCGGGTCGTGGATCCGACGACCCGAGAACATGAATTGGGTGGCCACTTATGTGTTTGAAGCGGTGGACGGTGATCCTGTTTCGATTGCGGTGCACCCCAGCGGGGACGACGTCGTTTGCTCCACCTCCAATGGTGGCTGCAAATTGTTTGAGTTATATGGGCCAGAATCAAATGCCAAGCTGTTGGCAAGAGAATCAGCTCCTTTGCAAGGAATTGGTCCACAGAAGTGTCTAGCTTTTAGTGTTGATGGATCTAAGTTGGCTACCGGCGGTTTGGATGGGCATATGAGAATTCTGGAGTGGCCAAGCCTGTCCATAATTTTAGATGAACCTAAGGCGCATAAATCTGTCCGTGATATGGATTTCAGCTTAGACTCAGAGTTCTTAGCTTCGACATCTACTGATGGCTCAGCGAGAATATGGAAGACGGAAGATGGTGTTCCTGTGACTACCTTGACTCGCGACTCAGATGAAAAGATTGAACACTGTTGCTTTTCTAAGGATGGGACAAAACCCTTTCTATTTTGCACAGTTCAAAAAGGTGCAAAAGCTTTAACTTCAGTCTGGGACATAAGTACATGGAAGAAAATTGGACATAAAAGGCTACTTAAAAAGTCTGCTGCTGTTATGTCTGTCAGCAAGGATGGAAAATATCTTGCTCTGGGAAGCAAAGATGGAGATATATGTGTGGTTGAAGTTAAGAAAATGGAGATTTGCCACTGGAGTAAGAGGCTACACCTGGGAACTTGTATTGCCACTCTAGACTTCTGTCCCACTGAAAGGGTTGTGCTCACCACCTCTAGTGAATGGGGAGCTGTGGTGACCAAGTTAAATGTTCCTGCAGATTGGAAAGAATGGCAGATCTATCTGTTGCTTTTAGGGCTGTTTTTGGCTTCTGCTGTGGCATTTTATATCTTCTTTGAGAAGTCTGATAATTTTTGGAACTTTCCTCTTGGAAAAAATCAACCAGCGAGACCGGAATTCGGGGCATTTTTAAAAGATTCACAGCCTTCTGACGATAGAAACATTTGGGGTCCTGTAGACATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002790 GO:0003400 GO:0003674 GO:0005085 GO:0005090 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006888 GO:0006950 GO:0007154 GO:0008047 GO:0008104 GO:0008150 GO:0009267 GO:0009306 GO:0009605 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015698 GO:0015833 GO:0016020 GO:0016021 GO:0016036 GO:0016192 GO:0019899 GO:0030176 GO:0030234 GO:0030695 GO:0031224 GO:0031227 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032386 GO:0032879 GO:0032940 GO:0033036 GO:0033043 GO:0033554 GO:0042175 GO:0042594 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043547 GO:0044087 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046903 GO:0046907 GO:0048193 GO:0048209 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0060589 GO:0060627 GO:0060628 GO:0065007 GO:0065009 GO:0071496 GO:0071702 GO:0071705 GO:0071944 GO:0090113 GO:0098772 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

WD40

Protein Analysis

362

Amino Acids

39.97

Weight (kDa)

5.87

Isoelectric Point (pI)

33.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	28 - 182	4.2e-10	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	36 - 244	2.2e-09	WDR3 second beta-propeller domain
WDR55	PF24796	37 - 194	5.4e-09	WDR55
Beta-prop_WDR3_1st	PF25173	41 - 182	2.5e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	42 - 275	1.5e-20	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	42 - 183	2.1e-12	Echinoderm microtubule-associated protein second beta-propeller
WD40_WDHD1_1st	PF24817	42 - 276	9.4e-19	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	90 - 282	1.3e-19	WDR5 beta-propeller domain
WD40	PF00400	125 - 154	5.2e-06	WD domain, G-beta repeat
WD40_CDC20-Fz	PF24807	125 - 280	2.2e-09	CDC20/Fizzy WD40 domain
EIF3I	PF24805	129 - 290	9.4e-11	EIF3I
WD40_Prp19	PF24814	142 - 281	1.3e-06	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	194 - 280	4.2e-07	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0010850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52190
fragaria_vesca	FvH4_7g06890 FvH4_7g06890
malus_domestica	MD02G1241000.v1.1 MD07G1075600.v1.1
prunus_persica	Prupe.2G096500_v2.0.a1
pyrus_communis	pycom02g20620 pycom07g05960
rosa_chinensis	RchiOBHm_Chr1g0336681 RchiOBHm_Chr1g0336701 RchiOBHm_Chr1g0336731
rosa_laevigata	RLG00000029338
rosa_multiflora	Rmu_sc0000907.1_g000011 Rmu_sc0011778.1_g000011 Rmu_sc0042619.1_g000001
rosa_roxburghii	Rroxscaffold_4G00315360
rosa_rugosa	Rorug01G0127500
rosa_samantha	Rh1CG140000 Rh1DG155600
rosa_wichuraiana	Rw1G011990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	43
AatII	GACGTC	1 cut(s)	153
AccI	GTMKAC	1 cut(s)	1080
AccII	CGCG	1 cut(s)	501
AciI	CCGC	5 cut(s)	42, 101, 128, 141, 309
AclWI	GGATC	4 cut(s)	46, 59, 107, 298
AcoI	YGGCCR	2 cut(s)	81, 341
AcsI	RAATTY	2 cut(s)	330, 1019
AcuI	CTGAAG	1 cut(s)	582
AcyI	GRCGYC	1 cut(s)	150
AfaI	GTAC	1 cut(s)	616
AfiI	CCNNNNNNNGG	5 cut(s)	142, 248, 397, 819, 1022
AflIII	ACRYGT	1 cut(s)	1083
AgsI	TTSAA	4 cut(s)	98, 521, 575, 734
AjiI	CACGTC	1 cut(s)	39
AjnI	CCWGG	1 cut(s)	777
AleI	CACNNNNGTG	2 cut(s)	89, 265
AluBI	AGCT	7 cut(s)	220, 239, 275, 408, 428, 590, 854
AluI	AGCT	7 cut(s)	220, 239, 275, 408, 428, 590, 854
Alw21I	GWGCWC	2 cut(s)	135, 831
Alw26I	GTCTC	1 cut(s)	1006
Alw44I	GTGCAC	1 cut(s)	131
AlwI	GGATC	4 cut(s)	46, 59, 107, 298
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	3 cut(s)	81, 200, 341
ApaLI	GTGCAC	1 cut(s)	131
ApeKI	GCWGC	2 cut(s)	177, 659
ApoI	RAATTY	2 cut(s)	330, 1019
AspLEI	GCGC	1 cut(s)	379
AspS9I	GGNCC	3 cut(s)	200, 257, 1073
AsuC2I	CCSGG	1 cut(s)	13
AsuHPI	GGTGA	3 cut(s)	122, 823, 871
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	257, 1073
AxyI	CCTNAGG	1 cut(s)	372
BaeGI	GKGCMC	1 cut(s)	135
BalI	TGGCCA	2 cut(s)	83, 343
BamHI	GGATCC	1 cut(s)	51
BbsI	GAAGAC	1 cut(s)	470
Bbv12I	GWGCWC	2 cut(s)	135, 831
BbvI	GCAGC	2 cut(s)	164, 646
BccI	CCATC	7 cut(s)	281, 311, 437, 467, 536, 677, 707
BcgI	CGANNNNNNTGC	2 cut(s)	112, 146
BciT130I	CCWGG	1 cut(s)	779
BcnI	CCSGG	1 cut(s)	13
BcoDI	GTCTC	1 cut(s)	1006
BfaI	CTAG	3 cut(s)	272, 800, 840
BfmI	CTRYAG	2 cut(s)	879, 1077
BglII	AGATCT	1 cut(s)	900
BisI	GCNGC	2 cut(s)	178, 660
BlpI	GCTNAGC	1 cut(s)	448
BlsI	GCNGC	2 cut(s)	179, 661
Bme1390I	CCNGG	2 cut(s)	13, 779
Bme18I	GGWCC	2 cut(s)	257, 1073
BmeT110I	CYCGRG	1 cut(s)	62
BmgBI	CACGTC	1 cut(s)	39
BmgT120I	GGNCC	3 cut(s)	200, 257, 1073
BmiI	GGNNCC	3 cut(s)	10, 53, 1074
BmrFI	CCNGG	2 cut(s)	13, 779
BoxI	GACNNNNGTC	1 cut(s)	807
BpiI	GAAGAC	1 cut(s)	470
BpmI	CTGGAG	2 cut(s)	356, 781
Bpu1102I	GCTNAGC	1 cut(s)	448
BpuMI	CCSGG	1 cut(s)	13
BsaHI	GRCGYC	1 cut(s)	150
BsaI	GGTCTC	1 cut(s)	1006
BsaJI	CCNNGG	1 cut(s)	778
BsaWI	WCCGGW	1 cut(s)	1015
BsaXI	ACNNNNNCTCC	2 cut(s)	843, 873
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 248, 397, 819, 1022
Bse118I	RCCGGY	1 cut(s)	305
Bse1I	ACTGG	1 cut(s)	764
Bse21I	CCTNAGG	1 cut(s)	372
BseBI	CCWGG	1 cut(s)	779
BseDI	CCNNGG	1 cut(s)	778
BseGI	GGATG	3 cut(s)	322, 547, 688
BseLI	CCNNNNNNNGG	5 cut(s)	142, 248, 397, 819, 1022
BseMII	CTCAG	3 cut(s)	429, 462, 519
BseNI	ACTGG	1 cut(s)	764
BseSI	GKGCMC	1 cut(s)	135
BseXI	GCAGC	2 cut(s)	164, 646
BseYI	CCCAGC	1 cut(s)	137
Bsh1236I	CGCG	1 cut(s)	501
BshFI	GGCC	3 cut(s)	83, 202, 343
BsiHKAI	GWGCWC	2 cut(s)	135, 831
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	3 cut(s)	12, 306, 1016
BslFI	GGGAC	4 cut(s)	158, 559, 620, 795
BslI	CCNNNNNNNGG	5 cut(s)	142, 248, 397, 819, 1022
BsmAI	GTCTC	1 cut(s)	1006
BsmFI	GGGAC	4 cut(s)	158, 559, 620, 795
BsnI	GGCC	3 cut(s)	83, 202, 343
Bso31I	GGTCTC	1 cut(s)	1006
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	2 cut(s)	135, 831
Bsp143I	GATC	4 cut(s)	51, 112, 290, 900
Bsp1720I	GCTNAGC	1 cut(s)	448
Bsp68I	TCGCGA	1 cut(s)	501
BspACI	CCGC	5 cut(s)	42, 101, 128, 141, 309
BspANI	GGCC	3 cut(s)	83, 202, 343
BspCNI	CTCAG	3 cut(s)	428, 461, 518
BspFNI	CGCG	1 cut(s)	501
BspLI	GGNNCC	3 cut(s)	10, 53, 1074
BspMAI	CTGCAG	1 cut(s)	883
BspPI	GGATC	4 cut(s)	46, 59, 107, 298
BspTNI	GGTCTC	1 cut(s)	1006
BsrFI	RCCGGY	1 cut(s)	305
BsrI	ACTGG	1 cut(s)	764
BssAI	RCCGGY	1 cut(s)	305
BssECI	CCNNGG	1 cut(s)	778
BssMI	GATC	4 cut(s)	51, 112, 290, 900
BssNI	GRCGYC	1 cut(s)	150
Bst2UI	CCWGG	1 cut(s)	779
Bst4CI	ACNGT	4 cut(s)	34, 110, 527, 571
BstACI	GRCGYC	1 cut(s)	150
BstDEI	CTNAG	8 cut(s)	294, 372, 409, 415, 424, 448, 505, 537
BstEII	GGTNACC	1 cut(s)	859
BstENI	CCTNNNNNAGG	1 cut(s)	246
BstF5I	GGATG	3 cut(s)	322, 547, 688
BstFNI	CGCG	1 cut(s)	501
BstHHI	GCGC	1 cut(s)	379
BstKTI	GATC	4 cut(s)	54, 115, 293, 903
BstMAI	GTCTC	1 cut(s)	1006
BstMBI	GATC	4 cut(s)	51, 112, 290, 900
BstMWI	GCNNNNNNNGC	1 cut(s)	919
BstNI	CCWGG	1 cut(s)	779
BstNSI	RCATGY	1 cut(s)	1087
BstPAI	GACNNNNGTC	1 cut(s)	807
BstPI	GGTNACC	1 cut(s)	859
BstSCI	CCNGG	2 cut(s)	11, 777
BstSFI	CTRYAG	2 cut(s)	879, 1077
BstSLI	GKGCMC	1 cut(s)	135
BstUI	CGCG	1 cut(s)	501
BstV1I	GCAGC	2 cut(s)	164, 646
BstV2I	GAAGAC	1 cut(s)	470
BstX2I	RGATCY	3 cut(s)	51, 290, 900
BstXI	CCANNNNNNTGG	1 cut(s)	223
BstYI	RGATCY	3 cut(s)	51, 290, 900
Bsu36I	CCTNAGG	1 cut(s)	372
BsuRI	GGCC	3 cut(s)	83, 202, 343
BtrI	CACGTC	1 cut(s)	39
BtsCI	GGATG	3 cut(s)	322, 547, 688
BtsIMutI	CAGTG	4 cut(s)	39, 523, 757, 813
BtuMI	TCGCGA	1 cut(s)	501
CfoI	GCGC	1 cut(s)	379
Cfr10I	RCCGGY	1 cut(s)	305
Cfr13I	GGNCC	3 cut(s)	200, 257, 1073
Csp6I	GTAC	1 cut(s)	615
CviAII	CATG	3 cut(s)	70, 618, 1084
CviQI	GTAC	1 cut(s)	615
DdeI	CTNAG	8 cut(s)	294, 372, 409, 415, 424, 448, 505, 537
DpnI	GATC	4 cut(s)	53, 114, 292, 902
DpnII	GATC	4 cut(s)	51, 112, 290, 900
DraI	TTTAAA	1 cut(s)	1035
DrdI	GACNNNNNNGTC	1 cut(s)	43
DseDI	GACNNNNNNGTC	1 cut(s)	43
EaeI	YGGCCR	2 cut(s)	81, 341
Eco31I	GGTCTC	1 cut(s)	1006
Eco47I	GGWCC	2 cut(s)	257, 1073
Eco57I	CTGAAG	1 cut(s)	582
Eco81I	CCTNAGG	1 cut(s)	372
Eco88I	CYCGRG	1 cut(s)	62
Eco91I	GGTNACC	1 cut(s)	859
EcoNI	CCTNNNNNAGG	1 cut(s)	246
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoO65I	GGTNACC	1 cut(s)	859
EcoRI	GAATTC	2 cut(s)	330, 1019
EcoRII	CCWGG	1 cut(s)	777
FaeI	CATG	3 cut(s)	73, 621, 1087
FaqI	GGGAC	4 cut(s)	158, 559, 620, 795
FatI	CATG	3 cut(s)	69, 617, 1083
FauI	CCCGC	2 cut(s)	35, 134
FauNDI	CATATG	1 cut(s)	324
FblI	GTMKAC	1 cut(s)	1080
Fnu4HI	GCNGC	2 cut(s)	178, 660
FokI	GGATG	3 cut(s)	329, 554, 695
Fsp4HI	GCNGC	2 cut(s)	178, 660
FspBI	CTAG	3 cut(s)	272, 800, 840
GlaI	GCGC	1 cut(s)	378
GluI	GCNGC	2 cut(s)	178, 660
GsaI	CCCAGC	1 cut(s)	141
GsuI	CTGGAG	2 cut(s)	356, 781
HaeIII	GGCC	3 cut(s)	83, 202, 343
HapII	CCGG	3 cut(s)	12, 306, 1016
HhaI	GCGC	1 cut(s)	379
Hin1I	GRCGYC	1 cut(s)	150
Hin1II	CATG	3 cut(s)	73, 621, 1087
Hin6I	GCGC	1 cut(s)	377
HinP1I	GCGC	1 cut(s)	377
HindIII	AAGCTT	1 cut(s)	588
HinfI	GANTC	6 cut(s)	206, 233, 413, 496, 503, 1040
HpaII	CCGG	3 cut(s)	12, 306, 1016
HphI	GGTGA	3 cut(s)	122, 823, 871
Hpy166II	GTNNAC	4 cut(s)	106, 133, 260, 1081
Hpy188I	TCNGA	6 cut(s)	19, 56, 418, 508, 970, 1054
Hpy188III	TCNNGA	3 cut(s)	335, 500, 800
Hpy8I	GTNNAC	4 cut(s)	106, 133, 260, 1081
Hpy99I	CGWCG	3 cut(s)	60, 152, 155
HpyAV	CCTTC	1 cut(s)	1059
HpyCH4III	ACNGT	4 cut(s)	34, 110, 527, 571
HpyCH4IV	ACGT	2 cut(s)	38, 150
HpyCH4V	TGCA	6 cut(s)	133, 180, 247, 567, 584, 881
HpyF10VI	GCNNNNNNNGC	1 cut(s)	919
HpyF3I	CTNAG	8 cut(s)	294, 372, 409, 415, 424, 448, 505, 537
HpySE526I	ACGT	2 cut(s)	38, 150
Hsp92I	GRCGYC	1 cut(s)	150
Hsp92II	CATG	3 cut(s)	73, 621, 1087
HspAI	GCGC	1 cut(s)	377
Kzo9I	GATC	4 cut(s)	51, 112, 290, 900
LmnI	GCTCC	5 cut(s)	8, 19, 164, 244, 851
Lsp1109I	GCAGC	2 cut(s)	164, 646
MaeI	CTAG	3 cut(s)	272, 800, 840
MaeII	ACGT	2 cut(s)	38, 150
MaeIII	GTNAC	3 cut(s)	34, 484, 859
MalI	GATC	4 cut(s)	53, 114, 292, 902
MboI	GATC	4 cut(s)	51, 112, 290, 900
MboII	GAAGA	4 cut(s)	475, 482, 634, 946
MflI	RGATCY	3 cut(s)	51, 290, 900
MhlI	GDGCHC	2 cut(s)	135, 831
MlsI	TGGCCA	2 cut(s)	83, 343
MluCI	AATT	8 cut(s)	73, 182, 252, 330, 357, 627, 973, 1019
MluNI	TGGCCA	2 cut(s)	83, 343
MlyI	GAGTC	3 cut(s)	407, 490, 497
MmeI	TCCRAC	1 cut(s)	79
MnlI	CCTC	5 cut(s)	21, 175, 762, 847, 999
Mox20I	TGGCCA	2 cut(s)	83, 343
MscI	TGGCCA	2 cut(s)	83, 343
MseI	TTAA	5 cut(s)	593, 648, 738, 869, 1034
MslI	CAYNNNNRTG	2 cut(s)	89, 265
Msp20I	TGGCCA	2 cut(s)	83, 343
MspA1I	CMGCKG	1 cut(s)	141
MspI	CCGG	3 cut(s)	12, 306, 1016
MspR9I	CCNGG	2 cut(s)	13, 779
MvaI	CCWGG	1 cut(s)	779
MvnI	CGCG	1 cut(s)	501
MwoI	GCNNNNNNNGC	1 cut(s)	919
NciI	CCSGG	1 cut(s)	13
NdeI	CATATG	1 cut(s)	324
NdeII	GATC	4 cut(s)	51, 112, 290, 900
NlaIII	CATG	3 cut(s)	73, 621, 1087
NlaIV	GGNNCC	3 cut(s)	10, 53, 1074
NmuCI	GTSAC	3 cut(s)	34, 484, 859
NruI	TCGCGA	1 cut(s)	501
NspI	RCATGY	1 cut(s)	1087
OliI	CACNNNNGTG	2 cut(s)	89, 265
PciI	ACATGT	1 cut(s)	1083
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PfeI	GAWTC	3 cut(s)	206, 233, 1040
PflFI	GACNNNGTC	1 cut(s)	149
PkrI	GCNGC	2 cut(s)	179, 661
PleI	GAGTC	3 cut(s)	407, 490, 497
PpsI	GAGTC	3 cut(s)	407, 490, 497
PpuMI	RGGWCCY	1 cut(s)	1073
PscI	ACATGT	1 cut(s)	1083
PshAI	GACNNNNGTC	1 cut(s)	807
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	1 cut(s)	777
PspEI	GGTNACC	1 cut(s)	859
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	1 cut(s)	777
PspN4I	GGNNCC	3 cut(s)	10, 53, 1074
PspPI	GGNCC	3 cut(s)	200, 257, 1073
PspPPI	RGGWCCY	1 cut(s)	1073
PstI	CTGCAG	1 cut(s)	883
PsuI	RGATCY	3 cut(s)	51, 290, 900
PsyI	GACNNNGTC	1 cut(s)	149
RruI	TCGCGA	1 cut(s)	501
RsaI	GTAC	1 cut(s)	616
RsaNI	GTAC	1 cut(s)	615
RseI	CAYNNNNRTG	2 cut(s)	89, 265
SaqAI	TTAA	5 cut(s)	593, 648, 738, 869, 1034
SatI	GCNGC	2 cut(s)	178, 660
Sau3AI	GATC	4 cut(s)	51, 112, 290, 900
Sau96I	GGNCC	3 cut(s)	200, 257, 1073
SchI	GAGTC	3 cut(s)	407, 490, 497
ScrFI	CCNGG	2 cut(s)	13, 779
SduI	GDGCHC	2 cut(s)	135, 831
SfcI	CTRYAG	2 cut(s)	879, 1077
SinI	GGWCC	2 cut(s)	257, 1073
SmiMI	CAYNNNNRTG	2 cut(s)	89, 265
Sse9I	AATT	8 cut(s)	73, 182, 252, 330, 357, 627, 973, 1019
SsiI	CCGC	5 cut(s)	42, 101, 128, 141, 309
SspMI	CTAG	3 cut(s)	272, 800, 840
StyD4I	CCNGG	2 cut(s)	11, 777
TaaI	ACNGT	4 cut(s)	34, 110, 527, 571
TaiI	ACGT	2 cut(s)	41, 153
TaqI	TCGA	2 cut(s)	122, 431
TasI	AATT	8 cut(s)	73, 182, 252, 330, 357, 627, 973, 1019
TatI	WGTACW	1 cut(s)	614
TfiI	GAWTC	3 cut(s)	206, 233, 1040
Tru1I	TTAA	5 cut(s)	593, 648, 738, 869, 1034
Tru9I	TTAA	5 cut(s)	593, 648, 738, 869, 1034
TscAI	CASTG	4 cut(s)	39, 530, 764, 820
TseFI	GTSAC	3 cut(s)	34, 484, 859
TseI	GCWGC	2 cut(s)	177, 659
Tsp45I	GTSAC	3 cut(s)	34, 484, 859
TspDTI	ATGAA	3 cut(s)	86, 381, 525
TspGWI	ACGGA	2 cut(s)	380, 482
TspRI	CASTG	4 cut(s)	39, 530, 764, 820
Tth111I	GACNNNGTC	1 cut(s)	149
VneI	GTGCAC	1 cut(s)	131
VpaK11BI	GGWCC	2 cut(s)	257, 1073
XagI	CCTNNNNNAGG	1 cut(s)	246
XapI	RAATTY	2 cut(s)	330, 1019
XbaI	TCTAGA	1 cut(s)	799
XceI	RCATGY	1 cut(s)	1087
XmiI	GTMKAC	1 cut(s)	1080
XspI	CTAG	3 cut(s)	272, 800, 840
ZraI	GACGTC	1 cut(s)	151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.