Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0005198

Physical Location & Seq

Genomic Coordinates Forward (+)

25109930 .. 25119780

Gene Structure 9851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g24390.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGCCCCTTCCTTCATGCCTAGTGGCACCATTGCACACCCACACTTTCTCCCTTCCGCAATCCCCAATCCTATGCAGACTTCCTCCTCTGCCCTCTCTCTCTCCATTCAGAAGATGGACGGTCACAGTGAACTTGGTTTCGCTGAGAATTTCGACCCCGGGATCGATCGGAAGGCTGAGGGATGATGAGCACGAGAGCAAGTCGGGGAGTGATAACTTTGAGGGCGCATCTGGGGATGATCAGGACGGCGGCGGAGGCGACCAACCGCCGAGGAAGAAGAAGTACCATAGGCACACTCCTAACCAAATCCAAGAACTTGAAAATTTTTTCAAAGAGTGTCCTCATCCGGATGAGAAGCAAAGGTCGGAGCTCAGCCGGCGTCTCGGCTTAGAGTCGAAGCAAGTCAAGTTCTGGTTTCAGAACAGAAGAACTCAGATGAAGACACAACTCGAACGCCACGAGAATATAATTCTCAGGCAAGAGAATGACAAGCTGATAGCTGAGAATGGTGTGATGAAGGATGCTATTTCAAACCCAGTTTGCAACAATTGTGGTGGCCCGGCCATTCCTGGTCAAATATCGTTTGATGAACACCAGCTTAGGATTGAGAATGCTCGATTGAAGGAAGAACTGAACCGGATATGTGCCATGGCGAACAAGTTGCCCATCTCCTCCTTGGGCATTCCTGGCTCTATTCTGAATGCAACCTCCGGTTTGGAACTTGGGGTTGGAAGGAATGGGATGGATGGTATGAATGCTGTAAGCGCTGGGTTGCCAATGGGGTTTGATTTAGGAGATGGGATTTCAAGCTCTTCCCCTATGATCCCTCCAGTTAAGACCTCGTCGGGCATGATGGGGAATGAGGTACCATTTGAGAGATCTATGTACATAGATCTTGCATTGGCAGCTATGGATGAATTGGTGAAGATGGTTCAGGTAGATAGCCCCCTGTGGATCAAAAGTTCAGATGGGACAGATATATTGAACATTGAGGAGTACCAGGCATTTTCTTGCATTGGTATGAAACCTAGCAGCCTTGTAACTGAAGCCACAAGGGACACTTGTGTCGTAATAGTAAACAGCTTGGCTCTCGTTGAGACATTGATGGATGCGAATCGATGGGCAGAAATGTTTCAGTGTTTGGTCGCTCGAGCCTCCACCATTGATATGATATCCAACGGAATGGATGGGACCAGAAATGGTGCTCTTCAACTGATGTATGCTGAGCTTCAAATGCTATCCCCTTTGGTCCCTGTCCGTCCGCTGAAGTTCCTCCGTTTTTGCAAGCAACATGCAGAGGGTGTATGGGCTGTGGTTGATGTTTCCATTGACATCAGTCAAGAAGGTCCCAACACAAACCCGTTTGTGGACTGCCGGAGGCTTCCTTCCGGATGCGTTGTGCAAGATATGCCTAACAATTGCTCCAAGGTAACATGGATTGAGCACACTGAATATGATGAGAATATTGTCCACCACCTCTTCCGGGAAACACTGCGTTCGGGTATGGGCTTTGGGGCGCAGAGATGGCTTGCCACTCTGCAAAGGCAAGGTGAGAGCCTGGCATTCCTCATTTCGTCAGCCAACTCCAATGAAGATCTCTCAGGGATAGATGTCAGCGGTAAGAAAAGCATGCTAAAGCTTGCACAGCGTATGGTGGATAACTTCTGTGCTGGGATTTCTGCCTCGTCTGTGCGCAAGTGGGACAAACTTTGCTTTGAAAATGTTAGTGAAGATGTGAGGGTTATGGCCCGGAAGAGTATGAATGACCCCGGCGAGCCACCAGGGATTGTGTTGAGTGTCGCAACAACTGTTTGGGTTCCGGTATCAAGGCATAGGGTGTTTGAGTTTTTGCGGGATGAACAGTTCAGGAAGGACTGGGACATTCTGTCCAGCGGTGTTCCAATGCAACGCATTGTCCAAATTGGCAAGGGCCAAGGAGATGCCAATGGTGTTTCTCTTCTTCGTGCTAACGCGCCAAATGCCAACAACAGTAACATGCTGATATTGCAAGAGACGTGGACTGACCCTACAGGCTCACTTGTAGTGTATGCACCGGTTGACACAGAATCAATAAATGTTGTGATGCGCGGTGGAGATTCTGCCTATGTAGCTCTTCTGCCATCAGGGTTTGCAATCCTTCCTGGTGGCCCGCCTGGCTACGGAGTGGTCAAATCTGAAGGCAATGGCTATGGTGGCAGTGGCGGATGCTTGCTGACTGTTGCATTCCAAATTCTGGTTAGCAGCCTTCCTACGGCCAAAATCAACATGGAGTCGGTTGAGACAGTTAGCACTCTCATATCTTGCACCATTCAGAGGATAAAATCAGCTCTTCTAGCAGCGGTTTTCTGGTGTGGTTTTGAACTTGGAAGAACACAGAGTTCGTTGGTTCGGGTATTGACTCTGTGGACCTGTAGGGAAAGGGGTACCCTCAGCTCGGTCTGGTTGCGTTTTGTTAATTGTTATCGATATTTAGCATACAGAATTATTGTGACATTGTTGGAAGAAACCTTTTCTTTTGCTAATGGTTATATTTTGGATTTTGGATGTTTAATGTTGCTGCTAGTTTTATGTTTAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

860

Amino Acids

94.58

Weight (kDa)

5.92

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005198)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130
malus_domestica	MD01G1198100.v1.1 MD07G1266200.v1.1
prunus_persica	Prupe.2G291400_v2.0.a1
pyrus_communis	pycom01g20820 pycom07g24390
rosa_chinensis	RchiOBHm_Chr1g0376881
rosa_laevigata	RLG00000026562
rosa_multiflora	Rmu_co8045660.1_g000001 Rmu_sc0002113.1_g000002 Rmu_ssc0000125.1_g000012
rosa_roxburghii	Rroxscaffold_4G00281650
rosa_rugosa	Rorug01G0399300 Rorug01G0399400 Rorug01G0399500 Rorug01G0399600 Rorug01G0399600
rosa_samantha	Rh1AG416600 Rh1BG375800 Rh1CG389600 Rh1DG406400
rosa_wichuraiana	Rw1G036550 Rw3G023490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1064
Acc16I	TGCGCA	1 cut(s)	1694
Acc65I	GGTACC	2 cut(s)	865, 2423
AccB1I	GGYRCC	3 cut(s)	25, 865, 2423
AccB7I	CCANNNNNTGG	1 cut(s)	2233
AccII	CGCG	2 cut(s)	1973, 2088
AccIII	TCCGGA	2 cut(s)	346, 1388
AclWI	GGATC	3 cut(s)	169, 817, 962
AcoI	YGGCCR	2 cut(s)	561, 2253
AcsI	RAATTY	3 cut(s)	147, 322, 2229
AcuI	CTGAAG	3 cut(s)	1065, 1286, 2196
AcyI	GRCGYC	1 cut(s)	379
AfaI	GTAC	5 cut(s)	284, 867, 887, 998, 2425
AfeI	AGCGCT	1 cut(s)	766
AfiI	CCNNNNNNNGG	7 cut(s)	1366, 1483, 2159, 2233, 2251, 2313, 2434
AgeI	ACCGGT	1 cut(s)	2053
AhdI	GACNNNNNGTC	1 cut(s)	1885
AjiI	CACGTC	1 cut(s)	2016
AjnI	CCWGG	7 cut(s)	568, 685, 999, 1557, 1780, 2140, 2152
AjuI	GAANNNNNNNTTGG	2 cut(s)	711, 743
AloI	GAACNNNNNNTCC	4 cut(s)	946, 978, 1847, 1879
Alw21I	GWGCWC	4 cut(s)	192, 372, 1207, 1446
Alw26I	GTCTC	4 cut(s)	386, 1091, 2006, 2273
AlwI	GGATC	3 cut(s)	169, 817, 962
Ama87I	CYCGRG	2 cut(s)	157, 1149
Aor13HI	TCCGGA	2 cut(s)	346, 1388
Aor51HI	AGCGCT	1 cut(s)	766
AoxI	GGCC	6 cut(s)	556, 561, 1746, 1930, 2146, 2253
ApeKI	GCWGC	5 cut(s)	905, 1032, 2241, 2336, 2557
ApoI	RAATTY	3 cut(s)	147, 322, 2229
AsiGI	ACCGGT	1 cut(s)	2053
Asp700I	GAANNNNTTC	1 cut(s)	1131
Asp718I	GGTACC	2 cut(s)	865, 2423
AspLEI	GCGC	6 cut(s)	227, 767, 1519, 1695, 1975, 2088
AspS9I	GGNCC	8 cut(s)	557, 1191, 1249, 1346, 1747, 1930, 2147, 2406
AsuC2I	CCSGG	6 cut(s)	158, 159, 560, 1484, 1750, 1770
AsuHPI	GGTGA	2 cut(s)	934, 1562
AvaI	CYCGRG	2 cut(s)	157, 1149
AvaII	GGWCC	4 cut(s)	1191, 1249, 1346, 2406
BanI	GGYRCC	3 cut(s)	25, 865, 2423
BanII	GRGCYC	1 cut(s)	372
BarI	GAAGNNNNNNTAC	2 cut(s)	266, 298
BauI	CACGAG	2 cut(s)	191, 458
BbsI	GAAGAC	1 cut(s)	446
Bbv12I	GWGCWC	4 cut(s)	192, 372, 1207, 1446
BbvCI	CCTCAGC	2 cut(s)	176, 2429
BbvI	GCAGC	5 cut(s)	917, 1044, 2253, 2348, 2544
BceAI	ACGGC	2 cut(s)	262, 2268
BcgI	CGANNNNNNTGC	2 cut(s)	643, 677
BciT130I	CCWGG	7 cut(s)	570, 687, 1001, 1559, 1782, 2142, 2154
BclI	TGATCA	1 cut(s)	238
BcnI	CCSGG	6 cut(s)	158, 159, 560, 1484, 1750, 1770
BcoDI	GTCTC	4 cut(s)	386, 1091, 2006, 2273
BfaI	CTAG	4 cut(s)	20, 1029, 2333, 2561
BfmI	CTRYAG	2 cut(s)	2028, 2410
BfoI	RGCGCY	1 cut(s)	768
BglI	GCCNNNNNGGC	1 cut(s)	2154
BglII	AGATCT	3 cut(s)	878, 892, 1594
BisI	GCNGC	6 cut(s)	250, 906, 1033, 2242, 2337, 2558
BlpI	GCTNAGC	2 cut(s)	371, 1224
BlsI	GCNGC	6 cut(s)	251, 907, 1034, 2243, 2338, 2559
Bme18I	GGWCC	4 cut(s)	1191, 1249, 1346, 2406
BmeRI	GACNNNNNGTC	1 cut(s)	1885
BmeT110I	CYCGRG	2 cut(s)	157, 1149
BmgBI	CACGTC	1 cut(s)	2016
BmgT120I	GGNCC	8 cut(s)	557, 1191, 1249, 1346, 1747, 1930, 2147, 2406
BmiI	GGNNCC	7 cut(s)	27, 867, 1192, 1251, 1348, 1818, 2425
BmrI	ACTGGG	2 cut(s)	530, 1885
BmsI	GCATC	7 cut(s)	236, 511, 1099, 1382, 1930, 2073, 2195
BmuI	ACTGGG	2 cut(s)	530, 1885
BoxI	GACNNNNGTC	1 cut(s)	1335
BpiI	GAAGAC	1 cut(s)	446
BpmI	CTGGAG	1 cut(s)	813
Bpu10I	CCTNAGC	3 cut(s)	176, 599, 2429
Bpu1102I	GCTNAGC	2 cut(s)	371, 1224
BpuMI	CCSGG	6 cut(s)	158, 159, 560, 1484, 1750, 1770
Bsa29I	ATCGAT	3 cut(s)	164, 1117, 2464
BsaBI	GATNNNNATC	1 cut(s)	1113
BsaHI	GRCGYC	1 cut(s)	379
BsaJI	CCNNGG	9 cut(s)	156, 157, 269, 648, 675, 1425, 1768, 1781, 1933
BsaWI	WCCGGW	6 cut(s)	346, 636, 710, 1388, 1819, 2053
BsaXI	ACNNNNNCTCC	4 cut(s)	32, 62, 1406, 1436
Bsc4I	CCNNNNNNNGG	7 cut(s)	1366, 1483, 2159, 2233, 2251, 2313, 2434
Bse118I	RCCGGY	2 cut(s)	375, 2053
Bse1I	ACTGG	3 cut(s)	536, 830, 1880
Bse3DI	GCAATG	2 cut(s)	29, 2188
Bse8I	GATNNNNATC	1 cut(s)	1113
BseAI	TCCGGA	2 cut(s)	346, 1388
BseBI	CCWGG	7 cut(s)	570, 687, 1001, 1559, 1782, 2142, 2154
BseCI	ATCGAT	3 cut(s)	164, 1117, 2464
BseDI	CCNNGG	9 cut(s)	156, 157, 269, 648, 675, 1425, 1768, 1781, 1933
BseJI	GATNNNNATC	1 cut(s)	1113
BseLI	CCNNNNNNNGG	7 cut(s)	1366, 1483, 2159, 2233, 2251, 2313, 2434
BseMI	GCAATG	2 cut(s)	29, 2188
BseMII	CTCAG	9 cut(s)	134, 167, 385, 446, 487, 492, 1215, 1614, 2443
BseNI	ACTGG	3 cut(s)	536, 830, 1880
BseRI	GAGGAG	3 cut(s)	75, 661, 1007
BseXI	GCAGC	5 cut(s)	917, 1044, 2253, 2348, 2544
BseYI	CCCAGC	2 cut(s)	767, 1670
Bsh1236I	CGCG	2 cut(s)	1973, 2088
Bsh1285I	CGRYCG	1 cut(s)	168
BshFI	GGCC	6 cut(s)	558, 563, 1748, 1932, 2148, 2255
BshNI	GGYRCC	3 cut(s)	25, 865, 2423
BshTI	ACCGGT	1 cut(s)	2053
BshVI	ATCGAT	3 cut(s)	164, 1117, 2464
BsiEI	CGRYCG	1 cut(s)	168
BsiHKAI	GWGCWC	4 cut(s)	192, 372, 1207, 1446
BsiHKCI	CYCGRG	2 cut(s)	157, 1149
BslFI	GGGAC	7 cut(s)	985, 1070, 1204, 1235, 1332, 1715, 1892
BslI	CCNNNNNNNGG	7 cut(s)	1366, 1483, 2159, 2233, 2251, 2313, 2434
BsmAI	GTCTC	4 cut(s)	386, 1091, 2006, 2273
BsmBI	CGTCTC	2 cut(s)	386, 2006
BsmFI	GGGAC	7 cut(s)	985, 1070, 1204, 1235, 1332, 1715, 1892
BsmI	GAATGC	6 cut(s)	616, 681, 706, 760, 1562, 2222
BsnI	GGCC	6 cut(s)	558, 563, 1748, 1932, 2148, 2255
BsoBI	CYCGRG	2 cut(s)	157, 1149
Bsp1286I	GDGCHC	4 cut(s)	192, 372, 1207, 1446
Bsp13I	TCCGGA	2 cut(s)	346, 1388
Bsp1407I	TGTACA	1 cut(s)	885
Bsp143I	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
Bsp1720I	GCTNAGC	2 cut(s)	371, 1224
Bsp19I	CCATGG	1 cut(s)	648
BspANI	GGCC	6 cut(s)	558, 563, 1748, 1932, 2148, 2255
BspCNI	CTCAG	9 cut(s)	135, 168, 384, 445, 486, 493, 1216, 1613, 2442
BspDI	ATCGAT	3 cut(s)	164, 1117, 2464
BspEI	TCCGGA	2 cut(s)	346, 1388
BspFNI	CGCG	2 cut(s)	1973, 2088
BspLI	GGNNCC	7 cut(s)	27, 867, 1192, 1251, 1348, 1818, 2425
BspPI	GGATC	3 cut(s)	169, 817, 962
BspQI	GCTCTTC	4 cut(s)	817, 1212, 2118, 2334
BspT107I	GGYRCC	3 cut(s)	25, 865, 2423
BsrDI	GCAATG	2 cut(s)	29, 2188
BsrFI	RCCGGY	2 cut(s)	375, 2053
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	3 cut(s)	536, 830, 1880
BssAI	RCCGGY	2 cut(s)	375, 2053
BssECI	CCNNGG	9 cut(s)	156, 157, 269, 648, 675, 1425, 1768, 1781, 1933
BssMI	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
BssNI	GRCGYC	1 cut(s)	379
BssSI	CACGAG	2 cut(s)	191, 458
BssT1I	CCWWGG	4 cut(s)	648, 675, 1425, 1933
Bst2BI	CACGAG	2 cut(s)	191, 458
Bst2UI	CCWGG	7 cut(s)	570, 687, 1001, 1559, 1782, 2142, 2154
Bst4CI	ACNGT	7 cut(s)	121, 127, 1810, 1863, 1991, 2218, 2284
Bst6I	CTCTTC	7 cut(s)	817, 1212, 1484, 1748, 1962, 2118, 2334
BstACI	GRCGYC	1 cut(s)	379
BstAPI	GCANNNNNTGC	1 cut(s)	1408
BstAUI	TGTACA	1 cut(s)	885
BstC8I	GCNNGC	8 cut(s)	377, 1286, 1530, 1631, 1641, 1775, 2150, 2210
BstDSI	CCRYGG	1 cut(s)	648
BstFNI	CGCG	2 cut(s)	1973, 2088
BstH2I	RGCGCY	1 cut(s)	768
BstHHI	GCGC	6 cut(s)	227, 767, 1519, 1695, 1975, 2088
BstKTI	GATC	8 cut(s)	164, 168, 241, 825, 881, 895, 957, 1597
BstMAI	GTCTC	4 cut(s)	386, 1091, 2006, 2273
BstMBI	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
BstMCI	CGRYCG	1 cut(s)	168
BstNI	CCWGG	7 cut(s)	570, 687, 1001, 1559, 1782, 2142, 2154
BstNSI	RCATGY	3 cut(s)	1295, 1633, 1999
BstPAI	GACNNNNGTC	1 cut(s)	1335
BstSFI	CTRYAG	2 cut(s)	2028, 2410
BstUI	CGCG	2 cut(s)	1973, 2088
BstV1I	GCAGC	5 cut(s)	917, 1044, 2253, 2348, 2544
BstV2I	GAAGAC	1 cut(s)	446
BstX2I	RGATCY	3 cut(s)	878, 892, 1594
BstXI	CCANNNNNNTGG	1 cut(s)	1183
BstYI	RGATCY	3 cut(s)	878, 892, 1594
Bsu15I	ATCGAT	3 cut(s)	164, 1117, 2464
BsuRI	GGCC	6 cut(s)	558, 563, 1748, 1932, 2148, 2255
BsuTUI	ATCGAT	3 cut(s)	164, 1117, 2464
BtgI	CCRYGG	1 cut(s)	648
BtrI	CACGTC	1 cut(s)	2016
BtsI	GCAGTG	2 cut(s)	1490, 2203
BtsIMutI	CAGTG	5 cut(s)	132, 1142, 1446, 1490, 2203
Cac8I	GCNNGC	8 cut(s)	377, 1286, 1530, 1631, 1641, 1775, 2150, 2210
CfoI	GCGC	6 cut(s)	227, 767, 1519, 1695, 1975, 2088
Cfr10I	RCCGGY	2 cut(s)	375, 2053
Cfr13I	GGNCC	8 cut(s)	557, 1191, 1249, 1346, 1747, 1930, 2147, 2406
Cfr9I	CCCGGG	1 cut(s)	157
ClaI	ATCGAT	3 cut(s)	164, 1117, 2464
CseI	GACGC	1 cut(s)	368
Csp6I	GTAC	5 cut(s)	283, 866, 886, 997, 2424
CspAI	ACCGGT	1 cut(s)	2053
CspCI	CAANNNNNGTGG	6 cut(s)	532, 535, 567, 570, 1997, 2032
CviAII	CATG	8 cut(s)	15, 649, 850, 1292, 1434, 1630, 1996, 2266
CviQI	GTAC	5 cut(s)	283, 866, 886, 997, 2424
DpnI	GATC	8 cut(s)	163, 167, 240, 824, 880, 894, 956, 1596
DpnII	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
DrdI	GACNNNNNNGTC	1 cut(s)	1064
DriI	GACNNNNNGTC	1 cut(s)	1885
DseDI	GACNNNNNNGTC	1 cut(s)	1064
EaeI	YGGCCR	2 cut(s)	561, 2253
Eam1104I	CTCTTC	7 cut(s)	817, 1212, 1484, 1748, 1962, 2118, 2334
Eam1105I	GACNNNNNGTC	1 cut(s)	1885
EarI	CTCTTC	7 cut(s)	817, 1212, 1484, 1748, 1962, 2118, 2334
EciI	GGCGGA	2 cut(s)	267, 2217
Ecl136II	GAGCTC	1 cut(s)	370
Eco130I	CCWWGG	4 cut(s)	648, 675, 1425, 1933
Eco24I	GRGCYC	1 cut(s)	372
Eco32I	GATATC	1 cut(s)	1173
Eco47I	GGWCC	4 cut(s)	1191, 1249, 1346, 2406
Eco47III	AGCGCT	1 cut(s)	766
Eco53kI	GAGCTC	1 cut(s)	370
Eco57I	CTGAAG	3 cut(s)	1065, 1286, 2196
Eco88I	CYCGRG	2 cut(s)	157, 1149
EcoICRI	GAGCTC	1 cut(s)	370
EcoO109I	RGGNCCY	1 cut(s)	1346
EcoRII	CCWGG	7 cut(s)	568, 685, 999, 1557, 1780, 2140, 2152
EcoRV	GATATC	1 cut(s)	1173
EcoT14I	CCWWGG	4 cut(s)	648, 675, 1425, 1933
EcoT38I	GRGCYC	1 cut(s)	372
ErhI	CCWWGG	4 cut(s)	648, 675, 1425, 1933
Esp3I	CGTCTC	2 cut(s)	386, 2006
FaeI	CATG	8 cut(s)	18, 652, 853, 1295, 1437, 1633, 1999, 2269
FalI	AAGNNNNNCTT	2 cut(s)	1045, 1077
FaqI	GGGAC	7 cut(s)	985, 1070, 1204, 1235, 1332, 1715, 1892
FatI	CATG	8 cut(s)	14, 648, 849, 1291, 1433, 1629, 1995, 2265
FauI	CCCGC	2 cut(s)	1845, 2157
FbaI	TGATCA	1 cut(s)	238
Fnu4HI	GCNGC	6 cut(s)	250, 906, 1033, 2242, 2337, 2558
FriOI	GRGCYC	1 cut(s)	372
Fsp4HI	GCNGC	6 cut(s)	250, 906, 1033, 2242, 2337, 2558
FspBI	CTAG	4 cut(s)	20, 1029, 2333, 2561
FspI	TGCGCA	1 cut(s)	1694
GlaI	GCGC	6 cut(s)	226, 766, 1518, 1694, 1974, 2087
GluI	GCNGC	6 cut(s)	250, 906, 1033, 2242, 2337, 2558
GsaI	CCCAGC	2 cut(s)	771, 1674
GsuI	CTGGAG	1 cut(s)	813
HaeII	RGCGCY	1 cut(s)	768
HaeIII	GGCC	6 cut(s)	558, 563, 1748, 1932, 2148, 2255
HgaI	GACGC	1 cut(s)	368
HhaI	GCGC	6 cut(s)	227, 767, 1519, 1695, 1975, 2088
Hin1I	GRCGYC	1 cut(s)	379
Hin1II	CATG	8 cut(s)	18, 652, 853, 1295, 1437, 1633, 1999, 2269
Hin6I	GCGC	6 cut(s)	225, 765, 1517, 1693, 1973, 2086
HinP1I	GCGC	6 cut(s)	225, 765, 1517, 1693, 1973, 2086
HincII	GTYRAC	1 cut(s)	2059
HindII	GTYRAC	1 cut(s)	2059
HindIII	AAGCTT	1 cut(s)	1637
HinfI	GANTC	6 cut(s)	392, 1114, 2066, 2096, 2270, 2398
HphI	GGTGA	2 cut(s)	934, 1562
Hpy166II	GTNNAC	7 cut(s)	130, 1078, 1369, 1471, 2019, 2059, 2406
Hpy188I	TCNGA	9 cut(s)	110, 170, 367, 420, 435, 699, 967, 2176, 2313
Hpy188III	TCNNGA	5 cut(s)	242, 347, 1340, 1389, 1867
Hpy8I	GTNNAC	7 cut(s)	130, 1078, 1369, 1471, 2019, 2059, 2406
Hpy99I	CGWCG	1 cut(s)	847
HpyCH4III	ACNGT	7 cut(s)	121, 127, 1810, 1863, 1991, 2218, 2284
HpyCH4IV	ACGT	1 cut(s)	2015
HpySE526I	ACGT	1 cut(s)	2015
Hsp92I	GRCGYC	1 cut(s)	379
Hsp92II	CATG	8 cut(s)	18, 652, 853, 1295, 1437, 1633, 1999, 2269
HspAI	GCGC	6 cut(s)	225, 765, 1517, 1693, 1973, 2086
Kpn2I	TCCGGA	2 cut(s)	346, 1388
KpnI	GGTACC	2 cut(s)	869, 2427
KroI	GCCGGC	1 cut(s)	375
KroNI	GCCGGC	1 cut(s)	377
Ksp22I	TGATCA	1 cut(s)	238
Kzo9I	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
LguI	GCTCTTC	4 cut(s)	817, 1212, 2118, 2334
LmnI	GCTCC	2 cut(s)	367, 1427
Lsp1109I	GCAGC	5 cut(s)	917, 1044, 2253, 2348, 2544
LweI	GCATC	7 cut(s)	236, 511, 1099, 1382, 1930, 2073, 2195
MaeI	CTAG	4 cut(s)	20, 1029, 2333, 2561
MaeII	ACGT	1 cut(s)	2015
MaeIII	GTNAC	5 cut(s)	121, 1039, 1429, 1991, 2488
MalI	GATC	8 cut(s)	163, 167, 240, 824, 880, 894, 956, 1596
MboI	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
MfeI	CAATTG	2 cut(s)	547, 1417
MflI	RGATCY	3 cut(s)	878, 892, 1594
MhlI	GDGCHC	4 cut(s)	192, 372, 1207, 1446
MlyI	GAGTC	3 cut(s)	401, 2279, 2392
MmeI	TCCRAC	4 cut(s)	345, 709, 1200, 2478
MroI	TCCGGA	2 cut(s)	346, 1388
MroNI	GCCGGC	1 cut(s)	375
MroXI	GAANNNNTTC	1 cut(s)	1131
MseI	TTAA	4 cut(s)	834, 2454, 2549, 2573
MslI	CAYNNNNRTG	3 cut(s)	348, 1019, 1166
MspA1I	CMGCKG	4 cut(s)	1264, 1617, 1893, 2339
MunI	CAATTG	2 cut(s)	547, 1417
Mva1269I	GAATGC	6 cut(s)	616, 681, 706, 760, 1562, 2222
MvaI	CCWGG	7 cut(s)	570, 687, 1001, 1559, 1782, 2142, 2154
MvnI	CGCG	2 cut(s)	1973, 2088
NaeI	GCCGGC	1 cut(s)	377
NciI	CCSGG	6 cut(s)	158, 159, 560, 1484, 1750, 1770
NcoI	CCATGG	1 cut(s)	648
NdeII	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
NgoMIV	GCCGGC	1 cut(s)	375
NlaIII	CATG	8 cut(s)	18, 652, 853, 1295, 1437, 1633, 1999, 2269
NlaIV	GGNNCC	7 cut(s)	27, 867, 1192, 1251, 1348, 1818, 2425
NmeAIII	GCCGAG	2 cut(s)	294, 363
NmuCI	GTSAC	2 cut(s)	121, 2488
NsbI	TGCGCA	1 cut(s)	1694
NspI	RCATGY	3 cut(s)	1295, 1633, 1999
PaeI	GCATGC	1 cut(s)	1633
PaeR7I	CTCGAG	1 cut(s)	1149
PciSI	GCTCTTC	4 cut(s)	817, 1212, 2118, 2334
PcsI	WCGNNNNNNNCGW	1 cut(s)	456
PctI	GAATGC	6 cut(s)	616, 681, 706, 760, 1562, 2222
PdiI	GCCGGC	1 cut(s)	377
PdmI	GAANNNNTTC	1 cut(s)	1131
PfeI	GAWTC	3 cut(s)	1114, 2066, 2096
PflFI	GACNNNGTC	1 cut(s)	841
PflMI	CCANNNNNTGG	1 cut(s)	2233
PfoI	TCCNGGA	1 cut(s)	1482
PinAI	ACCGGT	1 cut(s)	2053
PkrI	GCNGC	6 cut(s)	251, 907, 1034, 2243, 2338, 2559
Ple19I	CGATCG	1 cut(s)	168
PleI	GAGTC	3 cut(s)	400, 2278, 2392
PpsI	GAGTC	3 cut(s)	400, 2278, 2392
PpuMI	RGGWCCY	1 cut(s)	1346
PshAI	GACNNNNGTC	1 cut(s)	1335
Psp124BI	GAGCTC	1 cut(s)	372
Psp5II	RGGWCCY	1 cut(s)	1346
Psp6I	CCWGG	7 cut(s)	568, 685, 999, 1557, 1780, 2140, 2152
PspFI	CCCAGC	2 cut(s)	767, 1670
PspGI	CCWGG	7 cut(s)	568, 685, 999, 1557, 1780, 2140, 2152
PspN4I	GGNNCC	7 cut(s)	27, 867, 1192, 1251, 1348, 1818, 2425
PspPI	GGNCC	8 cut(s)	557, 1191, 1249, 1346, 1747, 1930, 2147, 2406
PspPPI	RGGWCCY	1 cut(s)	1346
PspXI	VCTCGAGB	1 cut(s)	1149
PsuI	RGATCY	3 cut(s)	878, 892, 1594
PsyI	GACNNNGTC	1 cut(s)	841
PvuI	CGATCG	1 cut(s)	168
RsaI	GTAC	5 cut(s)	284, 867, 887, 998, 2425
RsaNI	GTAC	5 cut(s)	283, 866, 886, 997, 2424
RseI	CAYNNNNRTG	3 cut(s)	348, 1019, 1166
SacI	GAGCTC	1 cut(s)	372
SapI	GCTCTTC	4 cut(s)	817, 1212, 2118, 2334
SaqAI	TTAA	4 cut(s)	834, 2454, 2549, 2573
SatI	GCNGC	6 cut(s)	250, 906, 1033, 2242, 2337, 2558
Sau3AI	GATC	8 cut(s)	161, 165, 238, 822, 878, 892, 954, 1594
Sau96I	GGNCC	8 cut(s)	557, 1191, 1249, 1346, 1747, 1930, 2147, 2406
SchI	GAGTC	3 cut(s)	401, 2279, 2392
SduI	GDGCHC	4 cut(s)	192, 372, 1207, 1446
SfaNI	GCATC	7 cut(s)	236, 511, 1099, 1382, 1930, 2073, 2195
SfcI	CTRYAG	2 cut(s)	2028, 2410
Sfr274I	CTCGAG	1 cut(s)	1149
SinI	GGWCC	4 cut(s)	1191, 1249, 1346, 2406
SlaI	CTCGAG	1 cut(s)	1149
SmaI	CCCGGG	1 cut(s)	159
SmiMI	CAYNNNNRTG	3 cut(s)	348, 1019, 1166
SmlI	CTYRAG	1 cut(s)	1149
SmoI	CTYRAG	1 cut(s)	1149
SphI	GCATGC	1 cut(s)	1633
SspI	AATATT	1 cut(s)	1465
SspMI	CTAG	4 cut(s)	20, 1029, 2333, 2561
SstI	GAGCTC	1 cut(s)	372
StyI	CCWWGG	4 cut(s)	648, 675, 1425, 1933
TaaI	ACNGT	7 cut(s)	121, 127, 1810, 1863, 1991, 2218, 2284
TaiI	ACGT	1 cut(s)	2018
TaqI	TCGA	8 cut(s)	152, 164, 395, 450, 616, 1117, 1150, 2464
TaqII	GACCGA	1 cut(s)	2425
TatI	WGTACW	1 cut(s)	885
TauI	GCSGC	1 cut(s)	252
TfiI	GAWTC	3 cut(s)	1114, 2066, 2096
Tru1I	TTAA	4 cut(s)	834, 2454, 2549, 2573
Tru9I	TTAA	4 cut(s)	834, 2454, 2549, 2573
TscAI	CASTG	5 cut(s)	132, 1142, 1453, 1497, 2203
TseFI	GTSAC	2 cut(s)	121, 2488
TseI	GCWGC	5 cut(s)	905, 1032, 2241, 2336, 2557
Tsp45I	GTSAC	2 cut(s)	121, 2488
TspDTI	ATGAA	9 cut(s)	452, 530, 603, 767, 930, 1037, 1605, 1775, 1872
TspGWI	ACGGA	4 cut(s)	1194, 1247, 1265, 2175
TspMI	CCCGGG	1 cut(s)	157
TspRI	CASTG	5 cut(s)	132, 1142, 1453, 1497, 2203
Tth111I	GACNNNGTC	1 cut(s)	841
Van91I	CCANNNNNTGG	1 cut(s)	2233
VpaK11BI	GGWCC	4 cut(s)	1191, 1249, 1346, 2406
XapI	RAATTY	3 cut(s)	147, 322, 2229
XceI	RCATGY	3 cut(s)	1295, 1633, 1999
XcmI	CCANNNNNNNNNTGG	3 cut(s)	111, 673, 2263
XhoI	CTCGAG	1 cut(s)	1149
XmaI	CCCGGG	1 cut(s)	157
XmnI	GAANNNNTTC	1 cut(s)	1131
XspI	CTAG	4 cut(s)	20, 1029, 2333, 2561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.