Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000125.1

Orthogroup ID

OG0005198

Physical Location & Seq

Genomic Coordinates Forward (+)

41456 .. 44626

Gene Structure 3171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000125.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

atggatgggcacaatgaacttgacctgattgctgagagtttcgaccccgggattattgggaggttgagggaagaggagtttgaccagagccggtcaggcagtgaccactttgatggggcatccggtgatgatcaagaccctgtcgacgaggatgatcggccacggaggaagaagaagtatcatcgtcatacccccagccaaatccaagaactggaatctttctttaaggaatgcccacatcctgatgaaaagcaaaggttggacctcagcaggaggcttggcttggagactaagcaagtcaagttttggttccagaatagaagaactcaaatgaagactcaactggagcgccatgagaatataattcttaggcaagagaatgacaagctccgagctgagaatggtgtgatgaaggaagctatgtcaaatccaatatgccacaactgtggtggccctgccattcctggccaaatttcatttgatgaacaccaactgaggattgagaatgctcgactgaatgatgaactgagtcgaatttgtactttggcacaaaagttcttgggcaggcccatttcaaacttggctgctccccgctctcttccaagctcgactgctcgtctagacctggcgatgggaataaatgggatgggttgtttgaatgctggaggcagcaatcagttgtcgatggggttcgagttgggagatggtgttggaagctcttcacctgtgatgcctctaatgaaaacggttatgggaatgccaaatgatttgcagcatgtgactgatagacatgtttacctggagcttgcaggcgaagctatggatgaattggttaggatggttcaagcagatacccctttgtggatgaaaagttcagatggtggaagcgaaacattgaacgtggagctgtacaggacattttcttgtatcagtaccaggcaaagtggcttggtaactgatgcttcaagggattcttgtatggtgatcataaacagcttggctcttgtagagactatgatggatgcgaatcgatggacagatatgttccctactttggttgctagagcctccaccattggcatgatttccagcggcccaaacggaaccagaaatggtactattcaaatgatgcatgccgagcttcaaatgctttcgccattggttccagtccgtccactcaagttcctccgtttttccaagcagcatgcagagggtgtgtgggctgttgtcgatgtttccattgacatccagcaagatgcttccagtgtgaattgccggaggcttccttctggcttcattgtgcaagatatgcccaatggttactccaaggtgacttggatagaacatttagaatataatgagagtggtgttcaccaattgttacagccattactacgttctggtattggctttggtgcacagaggtggcttgccactctccggagggaatgtgagtccctgactttcctcatgtcctctaccaatcctaatgaagttcctagagcttttgttctggggtttgtggctcatcagtgcgccaaccttagcatgcttttctttgaattcatacttaaccctgctggagaacaaaggattggtagaggacatgaggaaagtcagggactcacattccctctggagagtggcaagccacctctgtgcaccaaagccaataccagaacgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

561

Amino Acids

62.73

Weight (kDa)

5.79

Isoelectric Point (pI)

56.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005198)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130 FvH4_7g29130
malus_domestica	MD01G1198100.v1.1 MD07G1266200.v1.1
prunus_persica	Prupe.2G291400_v2.0.a1
pyrus_communis	pycom01g20820 pycom07g24390
rosa_chinensis	RchiOBHm_Chr1g0376881
rosa_laevigata	RLG00000026562
rosa_multiflora	Rmu_co8045660.1_g000001 Rmu_sc0002113.1_g000002 Rmu_ssc0000125.1_g000012
rosa_roxburghii	Rroxscaffold_4G00281650
rosa_rugosa	Rorug01G0399300 Rorug01G0399400 Rorug01G0399500 Rorug01G0399600 Rorug01G0399600
rosa_samantha	Rh1AG416600 Rh1BG375800 Rh1CG389600 Rh1DG406400
rosa_wichuraiana	Rw1G036550 Rw3G023490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	211
AccBSI	CCGCTC	1 cut(s)	594
AccI	GTMKAC	1 cut(s)	144
AccIII	TCCGGA	1 cut(s)	1440
AciI	CCGC	2 cut(s)	592, 1092
AcoI	YGGCCR	2 cut(s)	158, 466
AcsI	RAATTY	3 cut(s)	471, 534, 1562
AfaI	GTAC	4 cut(s)	541, 911, 934, 1117
AfiI	CCNNNNNNNGG	5 cut(s)	211, 631, 861, 1054, 1440
AflIII	ACRYGT	1 cut(s)	790
AgsI	TTSAA	8 cut(s)	576, 658, 845, 898, 966, 1124, 1145, 1562
AhdI	GACNNNNNGTC	1 cut(s)	615
AjnI	CCWGG	4 cut(s)	463, 624, 798, 935
AjuI	GAANNNNNNNTTGG	2 cut(s)	1578, 1610
AleI	CACNNNNGTG	3 cut(s)	444, 1423, 1657
AloI	GAACNNNNNNTCC	2 cut(s)	856, 888
Alw21I	GWGCWC	2 cut(s)	1420, 1664
Alw26I	GTCTC	2 cut(s)	281, 1004
Alw44I	GTGCAC	2 cut(s)	1416, 1660
Ama87I	CYCGRG	1 cut(s)	47
Aor13HI	TCCGGA	1 cut(s)	1440
AoxI	GGCC	5 cut(s)	158, 451, 466, 566, 1093
ApaLI	GTGCAC	2 cut(s)	1416, 1660
ApeKI	GCWGC	4 cut(s)	584, 669, 772, 1201
ApoI	RAATTY	3 cut(s)	471, 534, 1562
Asp700I	GAANNNNTTC	1 cut(s)	718
AspLEI	GCGC	2 cut(s)	351, 1538
AspS9I	GGNCC	4 cut(s)	262, 452, 567, 1094
AsuC2I	CCSGG	2 cut(s)	48, 49
AsuHPI	GGTGA	5 cut(s)	137, 714, 994, 1342, 1364
AvaI	CYCGRG	1 cut(s)	47
AvaII	GGWCC	1 cut(s)	262
BaeGI	GKGCMC	3 cut(s)	12, 1420, 1664
BalI	TGGCCA	1 cut(s)	468
BbsI	GAAGAC	1 cut(s)	341
Bbv12I	GWGCWC	2 cut(s)	1420, 1664
BbvCI	CCTCAGC	1 cut(s)	266
BbvI	GCAGC	4 cut(s)	571, 681, 784, 1213
BccI	CCATC	9 cut(s)	107, 625, 640, 679, 698, 832, 872, 1012, 1026
BciT130I	CCWGG	4 cut(s)	465, 626, 800, 937
BclI	TGATCA	2 cut(s)	130, 984
BcnI	CCSGG	2 cut(s)	48, 49
BcoDI	GTCTC	2 cut(s)	281, 1004
BfaI	CTAG	3 cut(s)	620, 1062, 1500
BfoI	RGCGCY	1 cut(s)	352
BglI	GCCNNNNNGGC	1 cut(s)	96
BisI	GCNGC	5 cut(s)	585, 670, 773, 1093, 1202
BlsI	GCNGC	5 cut(s)	586, 671, 774, 1094, 1203
Bme1390I	CCNGG	6 cut(s)	48, 49, 465, 626, 800, 937
Bme18I	GGWCC	1 cut(s)	262
BmeRI	GACNNNNNGTC	1 cut(s)	615
BmeT110I	CYCGRG	1 cut(s)	47
BmgT120I	GGNCC	4 cut(s)	262, 452, 567, 1094
BmiI	GGNNCC	3 cut(s)	311, 1105, 1164
BmrFI	CCNGG	6 cut(s)	48, 49, 465, 626, 800, 937
BmsI	GCATC	6 cut(s)	128, 720, 949, 1012, 1119, 1246
BpiI	GAAGAC	1 cut(s)	341
BpmI	CTGGAG	5 cut(s)	365, 684, 821, 1602, 1658
Bpu10I	CCTNAGC	2 cut(s)	266, 1544
BpuEI	CTTGAG	1 cut(s)	1163
BpuMI	CCSGG	2 cut(s)	48, 49
Bsa29I	ATCGAT	1 cut(s)	1030
BsaBI	GATNNNNATC	1 cut(s)	1026
BsaJI	CCNNGG	4 cut(s)	46, 47, 161, 1326
BsaWI	WCCGGW	2 cut(s)	122, 1440
BsaXI	ACNNNNNCTCC	4 cut(s)	693, 723, 1435, 1465
Bsc4I	CCNNNNNNNGG	5 cut(s)	211, 631, 861, 1054, 1440
Bse118I	RCCGGY	1 cut(s)	90
Bse1I	ACTGG	4 cut(s)	216, 348, 1166, 1263
Bse8I	GATNNNNATC	1 cut(s)	1026
BseAI	TCCGGA	1 cut(s)	1440
BseBI	CCWGG	4 cut(s)	465, 626, 800, 937
BseCI	ATCGAT	1 cut(s)	1030
BseDI	CCNNGG	4 cut(s)	46, 47, 161, 1326
BseJI	GATNNNNATC	1 cut(s)	1026
BseLI	CCNNNNNNNGG	5 cut(s)	211, 631, 861, 1054, 1440
BseMII	CTCAG	5 cut(s)	24, 280, 387, 485, 518
BseNI	ACTGG	4 cut(s)	216, 348, 1166, 1263
BseRI	GAGGAG	1 cut(s)	89
BseSI	GKGCMC	3 cut(s)	12, 1420, 1664
BseXI	GCAGC	4 cut(s)	571, 681, 784, 1213
BseYI	CCCAGC	1 cut(s)	194
BshFI	GGCC	5 cut(s)	160, 453, 468, 568, 1095
BshVI	ATCGAT	1 cut(s)	1030
BsiHKAI	GWGCWC	2 cut(s)	1420, 1664
BsiHKCI	CYCGRG	1 cut(s)	47
BsiSI	CCGG	5 cut(s)	48, 91, 123, 1276, 1441
BslFI	GGGAC	2 cut(s)	1441, 1635
BslI	CCNNNNNNNGG	5 cut(s)	211, 631, 861, 1054, 1440
BsmAI	GTCTC	2 cut(s)	281, 1004
BsmFI	GGGAC	2 cut(s)	1441, 1635
BsmI	GAATGC	4 cut(s)	236, 511, 664, 762
BsnI	GGCC	5 cut(s)	160, 453, 468, 568, 1095
BsoBI	CYCGRG	1 cut(s)	47
Bsp1286I	GDGCHC	3 cut(s)	12, 1420, 1664
Bsp13I	TCCGGA	1 cut(s)	1440
Bsp1407I	TGTACA	1 cut(s)	909
Bsp143I	GATC	3 cut(s)	130, 154, 984
BspACI	CCGC	2 cut(s)	592, 1092
BspANI	GGCC	5 cut(s)	160, 453, 468, 568, 1095
BspCNI	CTCAG	5 cut(s)	25, 279, 388, 486, 519
BspDI	ATCGAT	1 cut(s)	1030
BspEI	TCCGGA	1 cut(s)	1440
BspLI	GGNNCC	3 cut(s)	311, 1105, 1164
BspQI	GCTCTTC	1 cut(s)	724
BsrBI	CCGCTC	1 cut(s)	594
BsrFI	RCCGGY	1 cut(s)	90
BsrGI	TGTACA	1 cut(s)	909
BsrI	ACTGG	4 cut(s)	216, 348, 1166, 1263
BssAI	RCCGGY	1 cut(s)	90
BssECI	CCNNGG	4 cut(s)	46, 47, 161, 1326
BssMI	GATC	3 cut(s)	130, 154, 984
BssT1I	CCWWGG	1 cut(s)	1326
Bst2UI	CCWGG	4 cut(s)	465, 626, 800, 937
Bst4CI	ACNGT	2 cut(s)	446, 748
Bst6I	CTCTTC	3 cut(s)	66, 603, 724
BstAPI	GCANNNNNTGC	1 cut(s)	1309
BstAUI	TGTACA	1 cut(s)	909
BstC8I	GCNNGC	8 cut(s)	566, 807, 811, 1134, 1206, 1431, 1550, 1649
BstDEI	CTNAG	8 cut(s)	33, 266, 291, 368, 396, 494, 527, 1544
BstDSI	CCRYGG	1 cut(s)	161
BstH2I	RGCGCY	1 cut(s)	352
BstHHI	GCGC	2 cut(s)	351, 1538
BstKTI	GATC	3 cut(s)	133, 157, 987
BstMAI	GTCTC	2 cut(s)	281, 1004
BstMBI	GATC	3 cut(s)	130, 154, 984
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 815, 1138, 1147, 1309
BstNI	CCWGG	4 cut(s)	465, 626, 800, 937
BstNSI	RCATGY	5 cut(s)	779, 794, 1136, 1208, 1552
BstSCI	CCNGG	6 cut(s)	46, 47, 463, 624, 798, 935
BstSLI	GKGCMC	3 cut(s)	12, 1420, 1664
BstV1I	GCAGC	4 cut(s)	571, 681, 784, 1213
BstV2I	GAAGAC	1 cut(s)	341
BstXI	CCANNNNNNTGG	2 cut(s)	113, 446
Bsu15I	ATCGAT	1 cut(s)	1030
BsuRI	GGCC	5 cut(s)	160, 453, 468, 568, 1095
BsuTUI	ATCGAT	1 cut(s)	1030
BtgI	CCRYGG	1 cut(s)	161
BtgZI	GCGATG	1 cut(s)	644
BtsI	GCAGTG	1 cut(s)	106
BtsIMutI	CAGTG	3 cut(s)	106, 1270, 1538
Cac8I	GCNNGC	8 cut(s)	566, 807, 811, 1134, 1206, 1431, 1550, 1649
CfoI	GCGC	2 cut(s)	351, 1538
Cfr10I	RCCGGY	1 cut(s)	90
Cfr13I	GGNCC	4 cut(s)	262, 452, 567, 1094
Cfr9I	CCCGGG	1 cut(s)	47
ClaI	ATCGAT	1 cut(s)	1030
Csp6I	GTAC	4 cut(s)	540, 910, 933, 1116
CspCI	CAANNNNNGTGG	2 cut(s)	430, 465
CviAII	CATG	9 cut(s)	353, 776, 791, 1081, 1133, 1205, 1471, 1549, 1607
CviQI	GTAC	4 cut(s)	540, 910, 933, 1116
DdeI	CTNAG	8 cut(s)	33, 266, 291, 368, 396, 494, 527, 1544
DpnI	GATC	3 cut(s)	132, 156, 986
DpnII	GATC	3 cut(s)	130, 154, 984
DriI	GACNNNNNGTC	1 cut(s)	615
EaeI	YGGCCR	2 cut(s)	158, 466
Eam1104I	CTCTTC	3 cut(s)	66, 603, 724
Eam1105I	GACNNNNNGTC	1 cut(s)	615
EarI	CTCTTC	3 cut(s)	66, 603, 724
Eco130I	CCWWGG	1 cut(s)	1326
Eco47I	GGWCC	1 cut(s)	262
Eco88I	CYCGRG	1 cut(s)	47
EcoRI	GAATTC	1 cut(s)	1562
EcoRII	CCWGG	4 cut(s)	463, 624, 798, 935
EcoT14I	CCWWGG	1 cut(s)	1326
EcoT22I	ATGCAT	1 cut(s)	1134
ErhI	CCWWGG	1 cut(s)	1326
FaeI	CATG	9 cut(s)	356, 779, 794, 1084, 1136, 1208, 1474, 1552, 1610
FalI	AAGNNNNNCTT	2 cut(s)	958, 990
FaqI	GGGAC	2 cut(s)	1441, 1635
FatI	CATG	9 cut(s)	352, 775, 790, 1080, 1132, 1204, 1470, 1548, 1606
FauI	CCCGC	1 cut(s)	599
FbaI	TGATCA	2 cut(s)	130, 984
FblI	GTMKAC	1 cut(s)	144
Fnu4HI	GCNGC	5 cut(s)	585, 670, 773, 1093, 1202
Fsp4HI	GCNGC	5 cut(s)	585, 670, 773, 1093, 1202
FspBI	CTAG	3 cut(s)	620, 1062, 1500
GlaI	GCGC	2 cut(s)	350, 1537
GluI	GCNGC	5 cut(s)	585, 670, 773, 1093, 1202
GsaI	CCCAGC	1 cut(s)	198
GsuI	CTGGAG	5 cut(s)	365, 684, 821, 1602, 1658
HaeII	RGCGCY	1 cut(s)	352
HaeIII	GGCC	5 cut(s)	160, 453, 468, 568, 1095
HapII	CCGG	5 cut(s)	48, 91, 123, 1276, 1441
HhaI	GCGC	2 cut(s)	351, 1538
Hin1II	CATG	9 cut(s)	356, 779, 794, 1084, 1136, 1208, 1474, 1552, 1610
Hin6I	GCGC	2 cut(s)	349, 1536
HinP1I	GCGC	2 cut(s)	349, 1536
HincII	GTYRAC	1 cut(s)	145
HindII	GTYRAC	1 cut(s)	145
HinfI	GANTC	7 cut(s)	215, 337, 529, 971, 1027, 1454, 1623
HpaII	CCGG	5 cut(s)	48, 91, 123, 1276, 1441
HphI	GGTGA	5 cut(s)	137, 714, 994, 1342, 1364
Hpy166II	GTNNAC	6 cut(s)	145, 796, 1175, 1372, 1418, 1662
Hpy188I	TCNGA	2 cut(s)	392, 877
Hpy188III	TCNNGA	6 cut(s)	134, 242, 313, 620, 1441, 1637
Hpy8I	GTNNAC	6 cut(s)	145, 796, 1175, 1372, 1418, 1662
Hpy99I	CGWCG	1 cut(s)	149
HpyAV	CCTTC	2 cut(s)	406, 1296
HpyCH4III	ACNGT	2 cut(s)	446, 748
HpyCH4IV	ACGT	3 cut(s)	900, 1396, 1682
HpyCH4V	TGCA	7 cut(s)	772, 809, 1132, 1208, 1303, 1418, 1662
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 815, 1138, 1147, 1309
HpyF3I	CTNAG	8 cut(s)	33, 266, 291, 368, 396, 494, 527, 1544
HpySE526I	ACGT	3 cut(s)	900, 1396, 1682
Hsp92II	CATG	9 cut(s)	356, 779, 794, 1084, 1136, 1208, 1474, 1552, 1610
HspAI	GCGC	2 cut(s)	349, 1536
Kpn2I	TCCGGA	1 cut(s)	1440
Ksp22I	TGATCA	2 cut(s)	130, 984
Kzo9I	GATC	3 cut(s)	130, 154, 984
LguI	GCTCTTC	1 cut(s)	724
LmnI	GCTCC	5 cut(s)	346, 393, 592, 802, 904
Lsp1109I	GCAGC	4 cut(s)	571, 681, 784, 1213
LweI	GCATC	6 cut(s)	128, 720, 949, 1012, 1119, 1246
MaeI	CTAG	3 cut(s)	620, 1062, 1500
MaeII	ACGT	3 cut(s)	900, 1396, 1682
MaeIII	GTNAC	6 cut(s)	101, 778, 952, 1319, 1330, 1380
MalI	GATC	3 cut(s)	132, 156, 986
MbiI	CCGCTC	1 cut(s)	594
MboI	GATC	3 cut(s)	130, 154, 984
MboII	GAAGA	7 cut(s)	83, 181, 184, 333, 346, 590, 711
MfeI	CAATTG	1 cut(s)	1376
MhlI	GDGCHC	3 cut(s)	12, 1420, 1664
MlsI	TGGCCA	1 cut(s)	468
MluCI	AATT	7 cut(s)	363, 471, 534, 827, 1270, 1376, 1562
MluNI	TGGCCA	1 cut(s)	468
MlyI	GAGTC	4 cut(s)	331, 538, 1463, 1617
MmeI	TCCRAC	2 cut(s)	240, 691
Mox20I	TGGCCA	1 cut(s)	468
Mph1103I	ATGCAT	1 cut(s)	1134
MroI	TCCGGA	1 cut(s)	1440
MroXI	GAANNNNTTC	1 cut(s)	718
MscI	TGGCCA	1 cut(s)	468
MseI	TTAA	2 cut(s)	225, 1572
MslI	CAYNNNNRTG	6 cut(s)	111, 243, 444, 1079, 1423, 1657
Msp20I	TGGCCA	1 cut(s)	468
MspA1I	CMGCKG	1 cut(s)	1092
MspI	CCGG	5 cut(s)	48, 91, 123, 1276, 1441
MspR9I	CCNGG	6 cut(s)	48, 49, 465, 626, 800, 937
MunI	CAATTG	1 cut(s)	1376
Mva1269I	GAATGC	4 cut(s)	236, 511, 664, 762
MvaI	CCWGG	4 cut(s)	465, 626, 800, 937
MwoI	GCNNNNNNNGC	5 cut(s)	96, 815, 1138, 1147, 1309
NciI	CCSGG	2 cut(s)	48, 49
NdeII	GATC	3 cut(s)	130, 154, 984
NlaIII	CATG	9 cut(s)	356, 779, 794, 1084, 1136, 1208, 1474, 1552, 1610
NlaIV	GGNNCC	3 cut(s)	311, 1105, 1164
NmeAIII	GCCGAG	1 cut(s)	1162
NmuCI	GTSAC	3 cut(s)	101, 778, 1330
NsiI	ATGCAT	1 cut(s)	1134
NspI	RCATGY	5 cut(s)	779, 794, 1136, 1208, 1552
OliI	CACNNNNGTG	3 cut(s)	444, 1423, 1657
PaeI	GCATGC	3 cut(s)	1136, 1208, 1552
PciI	ACATGT	1 cut(s)	790
PciSI	GCTCTTC	1 cut(s)	724
PctI	GAATGC	4 cut(s)	236, 511, 664, 762
PdmI	GAANNNNTTC	1 cut(s)	718
PfeI	GAWTC	3 cut(s)	215, 971, 1027
PflFI	GACNNNGTC	1 cut(s)	140
PflMI	CCANNNNNTGG	1 cut(s)	211
PkrI	GCNGC	5 cut(s)	586, 671, 774, 1094, 1203
PleI	GAGTC	4 cut(s)	331, 537, 1462, 1617
PpsI	GAGTC	4 cut(s)	331, 537, 1462, 1617
PscI	ACATGT	1 cut(s)	790
Psp6I	CCWGG	4 cut(s)	463, 624, 798, 935
PspFI	CCCAGC	1 cut(s)	194
PspGI	CCWGG	4 cut(s)	463, 624, 798, 935
PspN4I	GGNNCC	3 cut(s)	311, 1105, 1164
PspPI	GGNCC	4 cut(s)	262, 452, 567, 1094
PsyI	GACNNNGTC	1 cut(s)	140
RsaI	GTAC	4 cut(s)	541, 911, 934, 1117
RsaNI	GTAC	4 cut(s)	540, 910, 933, 1116
RseI	CAYNNNNRTG	6 cut(s)	111, 243, 444, 1079, 1423, 1657
SalI	GTCGAC	1 cut(s)	143
SapI	GCTCTTC	1 cut(s)	724
SaqAI	TTAA	2 cut(s)	225, 1572
SatI	GCNGC	5 cut(s)	585, 670, 773, 1093, 1202
Sau3AI	GATC	3 cut(s)	130, 154, 984
Sau96I	GGNCC	4 cut(s)	262, 452, 567, 1094
SchI	GAGTC	4 cut(s)	331, 538, 1463, 1617
ScrFI	CCNGG	6 cut(s)	48, 49, 465, 626, 800, 937
SduI	GDGCHC	3 cut(s)	12, 1420, 1664
SfaNI	GCATC	6 cut(s)	128, 720, 949, 1012, 1119, 1246
SinI	GGWCC	1 cut(s)	262
SmaI	CCCGGG	1 cut(s)	49
SmiMI	CAYNNNNRTG	6 cut(s)	111, 243, 444, 1079, 1423, 1657
SmlI	CTYRAG	1 cut(s)	1178
SmoI	CTYRAG	1 cut(s)	1178
SphI	GCATGC	3 cut(s)	1136, 1208, 1552
Sse9I	AATT	7 cut(s)	363, 471, 534, 827, 1270, 1376, 1562
SsiI	CCGC	2 cut(s)	592, 1092
SspMI	CTAG	3 cut(s)	620, 1062, 1500
StyD4I	CCNGG	6 cut(s)	46, 47, 463, 624, 798, 935
StyI	CCWWGG	1 cut(s)	1326
TaaI	ACNGT	2 cut(s)	446, 748
TaiI	ACGT	3 cut(s)	903, 1399, 1685
TaqI	TCGA	9 cut(s)	42, 144, 511, 532, 608, 683, 693, 1030, 1230
TasI	AATT	7 cut(s)	363, 471, 534, 827, 1270, 1376, 1562
TatI	WGTACW	2 cut(s)	539, 909
TauI	GCSGC	1 cut(s)	1095
TfiI	GAWTC	3 cut(s)	215, 971, 1027
Tru1I	TTAA	2 cut(s)	225, 1572
Tru9I	TTAA	2 cut(s)	225, 1572
TscAI	CASTG	3 cut(s)	106, 1270, 1538
TseFI	GTSAC	3 cut(s)	101, 778, 1330
TseI	GCWGC	4 cut(s)	584, 669, 772, 1201
Tsp45I	GTSAC	3 cut(s)	101, 778, 1330
TspGWI	ACGGA	4 cut(s)	178, 1116, 1160, 1178
TspMI	CCCGGG	1 cut(s)	47
TspRI	CASTG	3 cut(s)	106, 1270, 1538
Tth111I	GACNNNGTC	1 cut(s)	140
Van91I	CCANNNNNTGG	1 cut(s)	211
VneI	GTGCAC	2 cut(s)	1416, 1660
VpaK11BI	GGWCC	1 cut(s)	262
XapI	RAATTY	3 cut(s)	471, 534, 1562
XbaI	TCTAGA	1 cut(s)	619
XceI	RCATGY	5 cut(s)	779, 794, 1136, 1208, 1552
XcmI	CCANNNNNNNNNTGG	2 cut(s)	446, 577
XmaI	CCCGGG	1 cut(s)	47
XmiI	GTMKAC	1 cut(s)	144
XmnI	GAANNNNTTC	1 cut(s)	718
XspI	CTAG	3 cut(s)	620, 1062, 1500
Zsp2I	ATGCAT	1 cut(s)	1134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.