pycom07g26930

GTPase-activating protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
26788549 .. 26791778
3230 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g26930.2

Sequence Viewer

Length: 1314 bp
ATGATCCCCTCCGGTTCCGGGAACGCCTTCATCTCCGGCGGACGCGGGTTATGGTCGGCGGCACCGTCGTACGTTGCCGTCGGCGTCACGGCCTTGGCTGGGCTCGCGGTGGTCGTGGCCGTGTTCTGCACTGCCACTAGGGTTCGCCTTAAGTCACCTTGGTCCCGCAGGAAAAGAAAACATGCCCTTTCAGCTCAGCAATGGAGGCTATTCTTTACACCAGATGGAAAGCTTCGCGATGGTGGAGTTAAGTTGGTGAAGAAAGTTCGCAGTGGAGGTGTTGATCCAAGTATTAGGGCAGAAGTTTGGCCATTTCTCCTTGGAGTCTATGAATTAAACAGTTCAAAGGAAGAAAGGGAGATAGTACGATCTCAGAAAAGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGCCGACTCATAAAGCGCGAAAATGATAGCTCTAAGTTGAATGGGGACAGTAGTAGCTTCACCCATGATCCAGGTTCTCCCAGCTCCGAGGATGCGGTTAGCGCCAGGGAATCCCTTTCTAGTGAAGATAAGATACCAGATGTTGAATACTCAGATGACCCTTCCAGTACATTGTTGGATGGAGATGATGATGGTTCAAGAGAAAACACAAATGCTGATTCCAAAGCAATAAACTCTGACTTGTCTGACTCGGACTCCTCTGAAGAACCTGAGGTGATTCAGGCTTTCCCCTCATGTGAAGGGAGGGAAGAAAATGATCCTGATGTGACTTCCAAGGATGAATCTTCTCCCTTGAGGACCGAGGTCCAATCAAATCTAAACAGTGAGGATTTTGCCACATGGCAGCGGATCATACGCCTTGATGCAGTACGAACTAATTCGGATTGGATTCCGCACTCCTCATCTCAAGCTGAAGTGTCACAGGATAGGGCATCACGTTCGGCTGAGGCTGTTGGGTTGAAAGATTACAGTCACTTGGAGCCTTGCAGAATTTTCCATGCCGCTAGACTAGTTGCTATTCTTGAAGCATATGCACTCTATGACCCCGAAATTGGTTACTGCCAGGGCATGAGTGACCTGCTTTCTCCTATAGCTGCTGTAATAACAGAGGATCACGAGGCTTTCTGGTGTTTTGTCGGTTTCATGAAGAAGGCTCGACATAATTTTAGGCTCGACGAGGTAGGGATCCAAAGGCAGTTGAGTATCGTTTCTAAAATTATCAAATGCAAGGACTCCCACCTATACAGGCACTTGGAGAAGCTCCAGGCGGAGGATTGCTTTTTCGTTTATAGGATGGTGGTTGTGCTATTTAGGAGGGAGTTGACGTTCGAACAGACAGTATGA

Protein Analysis

438

Amino Acids

48.98

Weight (kDa)

5.74

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1056
AccB1I GGYRCC 1 cut(s) 61
AccII CGCG 4 cut(s) 45, 107, 237, 429
AclWI GGATC 7 cut(s) 278, 473, 722, 827, 1089, 1150, 1163
AcoI YGGCCR 2 cut(s) 117, 308
AcsI RAATTY 1 cut(s) 960
AcuI CTGAAG 2 cut(s) 693, 903
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 4 cut(s) 71, 366, 580, 840
AfiI CCNNNNNNNGG 4 cut(s) 18, 99, 1022, 1240
AflII CTTAAG 1 cut(s) 149
AgsI TTSAA 6 cut(s) 345, 451, 557, 609, 931, 995
AhlI ACTAGT 1 cut(s) 979
AjnI CCWGG 4 cut(s) 481, 515, 1032, 1233
AloI GAACNNNNNNTCC 2 cut(s) 1280, 1312
AluBI AGCT 8 cut(s) 194, 232, 441, 468, 495, 881, 1064, 1231
AluI AGCT 8 cut(s) 194, 232, 441, 468, 495, 881, 1064, 1231
AlwI GGATC 7 cut(s) 278, 473, 722, 827, 1089, 1150, 1163
AoxI GGCC 3 cut(s) 90, 117, 308
ApeKI GCWGC 2 cut(s) 814, 1064
ApoI RAATTY 1 cut(s) 960
Asp700I GAANNNNTTC 2 cut(s) 26, 847
AspLEI GCGC 2 cut(s) 429, 515
AspS9I GGNCC 3 cut(s) 162, 768, 775
AsuC2I CCSGG 1 cut(s) 19
AsuHPI GGTGA 4 cut(s) 147, 268, 463, 697
AsuII TTCGAA 1 cut(s) 1299
AvaII GGWCC 3 cut(s) 162, 768, 775
AxyI CCTNAGG 1 cut(s) 681
BalI TGGCCA 1 cut(s) 310
BamHI GGATCC 1 cut(s) 1155
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 1 cut(s) 105
BarI GAAGNNNNNNTAC 2 cut(s) 528, 560
BauI CACGAG 1 cut(s) 1085
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 2 cut(s) 826, 1051
BccI CCATC 5 cut(s) 218, 233, 584, 596, 1258
BceAI ACGGC 3 cut(s) 62, 104, 105
BcgI CGANNNNNNTGC 2 cut(s) 891, 925
BciT130I CCWGG 4 cut(s) 483, 517, 1034, 1235
BcnI CCSGG 1 cut(s) 19
BcuI ACTAGT 1 cut(s) 979
BfaI CTAG 4 cut(s) 138, 531, 975, 980
BfmI CTRYAG 1 cut(s) 1059
BfoI RGCGCY 1 cut(s) 516
BfrI CTTAAG 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 1056
BisI GCNGC 5 cut(s) 60, 412, 815, 972, 1065
BlpI GCTNAGC 1 cut(s) 195
BlsI GCNGC 5 cut(s) 61, 413, 816, 973, 1066
Bme1390I CCNGG 5 cut(s) 19, 483, 517, 1034, 1235
Bme18I GGWCC 3 cut(s) 162, 768, 775
BmgT120I GGNCC 3 cut(s) 162, 768, 775
BmiI GGNNCC 5 cut(s) 16, 63, 164, 951, 1157
BmrFI CCNGG 5 cut(s) 19, 483, 517, 1034, 1235
BmsI GCATC 3 cut(s) 493, 823, 911
BoxI GACNNNNGTC 1 cut(s) 773
BpmI CTGGAG 1 cut(s) 1217
Bpu10I CCTNAGC 1 cut(s) 915
Bpu1102I GCTNAGC 1 cut(s) 195
Bpu14I TTCGAA 1 cut(s) 1299
BpuEI CTTGAG 2 cut(s) 784, 861
BpuMI CCSGG 1 cut(s) 19
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 8 cut(s) 93, 158, 319, 498, 516, 744, 771, 1033
BsaWI WCCGGW 1 cut(s) 11
BsaXI ACNNNNNCTCC 4 cut(s) 650, 680, 1280, 1310
Bsc4I CCNNNNNNNGG 4 cut(s) 18, 99, 1022, 1240
Bse1I ACTGG 1 cut(s) 576
Bse21I CCTNAGG 1 cut(s) 681
Bse3DI GCAATG 1 cut(s) 206
BseBI CCWGG 4 cut(s) 483, 517, 1034, 1235
BseDI CCNNGG 8 cut(s) 93, 158, 319, 498, 516, 744, 771, 1033
BseGI GGATG 4 cut(s) 508, 595, 754, 1269
BseLI CCNNNNNNNGG 4 cut(s) 18, 99, 1022, 1240
BseMI GCAATG 1 cut(s) 206
BseMII CTCAG 5 cut(s) 209, 386, 576, 672, 906
BseNI ACTGG 1 cut(s) 576
BseRI GAGGAG 2 cut(s) 658, 859
BseXI GCAGC 2 cut(s) 826, 1051
BseYI CCCAGC 2 cut(s) 98, 491
BsgI GTGCAG 1 cut(s) 112
Bsh1236I CGCG 4 cut(s) 45, 107, 237, 429
BshFI GGCC 3 cut(s) 92, 119, 310
BshNI GGYRCC 1 cut(s) 61
BsiSI CCGG 3 cut(s) 12, 18, 36
BsiWI CGTACG 1 cut(s) 69
BslFI GGGAC 2 cut(s) 148, 470
BslI CCNNNNNNNGG 4 cut(s) 18, 99, 1022, 1240
BsmFI GGGAC 2 cut(s) 148, 470
BsnI GGCC 3 cut(s) 92, 119, 310
Bsp119I TTCGAA 1 cut(s) 1299
Bsp1286I GDGCHC 1 cut(s) 105
Bsp143I GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
Bsp1720I GCTNAGC 1 cut(s) 195
Bsp68I TCGCGA 1 cut(s) 237
BspANI GGCC 3 cut(s) 92, 119, 310
BspCNI CTCAG 5 cut(s) 208, 385, 575, 673, 907
BspFNI CGCG 4 cut(s) 45, 107, 237, 429
BspHI TCATGA 1 cut(s) 1113
BspLI GGNNCC 5 cut(s) 16, 63, 164, 951, 1157
BspMI ACCTGC 1 cut(s) 1056
BspPI GGATC 7 cut(s) 278, 473, 722, 827, 1089, 1150, 1163
BspT104I TTCGAA 1 cut(s) 1299
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 206
BsrI ACTGG 1 cut(s) 576
BssECI CCNNGG 8 cut(s) 93, 158, 319, 498, 516, 744, 771, 1033
BssMI GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 1 cut(s) 1085
BssT1I CCWWGG 4 cut(s) 93, 158, 319, 744
Bst2BI CACGAG 1 cut(s) 1085
Bst2UI CCWGG 4 cut(s) 483, 517, 1034, 1235
Bst4CI ACNGT 7 cut(s) 66, 341, 408, 461, 794, 941, 1309
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 149
BstAPI GCANNNNNTGC 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 1299
BstC8I GCNNGC 1 cut(s) 105
BstDEI CTNAG 6 cut(s) 195, 372, 444, 562, 681, 915
BstF5I GGATG 4 cut(s) 508, 595, 754, 1269
BstFNI CGCG 4 cut(s) 45, 107, 237, 429
BstH2I RGCGCY 1 cut(s) 516
BstHHI GCGC 2 cut(s) 429, 515
BstKTI GATC 8 cut(s) 6, 286, 371, 481, 730, 822, 1084, 1158
BstMBI GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
BstMWI GCNNNNNNNGC 5 cut(s) 104, 191, 205, 408, 512
BstNI CCWGG 4 cut(s) 483, 517, 1034, 1235
BstNSI RCATGY 1 cut(s) 185
BstPAI GACNNNNGTC 1 cut(s) 773
BstSCI CCNGG 5 cut(s) 17, 481, 515, 1032, 1233
BstSFI CTRYAG 1 cut(s) 1059
BstUI CGCG 4 cut(s) 45, 107, 237, 429
BstV1I GCAGC 2 cut(s) 826, 1051
BstX2I RGATCY 1 cut(s) 1155
BstYI RGATCY 1 cut(s) 1155
Bsu36I CCTNAGG 1 cut(s) 681
BsuRI GGCC 3 cut(s) 92, 119, 310
BtgZI GCGATG 1 cut(s) 252
BtsCI GGATG 4 cut(s) 508, 595, 754, 1269
BtsI GCAGTG 2 cut(s) 129, 277
BtsIMutI CAGTG 4 cut(s) 129, 277, 413, 799
BtuMI TCGCGA 1 cut(s) 237
BveI ACCTGC 1 cut(s) 1056
Cac8I GCNNGC 1 cut(s) 105
CciI TCATGA 1 cut(s) 1113
CfoI GCGC 2 cut(s) 429, 515
Cfr13I GGNCC 3 cut(s) 162, 768, 775
CseI GACGC 2 cut(s) 51, 73
Csp6I GTAC 4 cut(s) 70, 365, 579, 839
CviAII CATG 7 cut(s) 182, 476, 705, 810, 968, 1039, 1114
CviQI GTAC 4 cut(s) 70, 365, 579, 839
DdeI CTNAG 6 cut(s) 195, 372, 444, 562, 681, 915
DpnI GATC 8 cut(s) 5, 285, 370, 480, 729, 821, 1083, 1157
DpnII GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
EaeI YGGCCR 2 cut(s) 117, 308
EciI GGCGGA 2 cut(s) 54, 1253
Eco130I CCWWGG 4 cut(s) 93, 158, 319, 744
Eco24I GRGCYC 1 cut(s) 105
Eco47I GGWCC 3 cut(s) 162, 768, 775
Eco57I CTGAAG 2 cut(s) 693, 903
Eco81I CCTNAGG 1 cut(s) 681
EcoRII CCWGG 4 cut(s) 481, 515, 1032, 1233
EcoT14I CCWWGG 4 cut(s) 93, 158, 319, 744
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 4 cut(s) 93, 158, 319, 744
FaeI CATG 7 cut(s) 185, 479, 708, 813, 971, 1042, 1117
FaqI GGGAC 2 cut(s) 148, 470
FatI CATG 7 cut(s) 181, 475, 704, 809, 967, 1038, 1113
FauI CCCGC 2 cut(s) 38, 173
FauNDI CATATG 1 cut(s) 1000
Fnu4HI GCNGC 5 cut(s) 60, 412, 815, 972, 1065
FokI GGATG 4 cut(s) 515, 602, 761, 1276
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 5 cut(s) 60, 412, 815, 972, 1065
FspBI CTAG 4 cut(s) 138, 531, 975, 980
GlaI GCGC 2 cut(s) 428, 514
GluI GCNGC 5 cut(s) 60, 412, 815, 972, 1065
GsaI CCCAGC 2 cut(s) 102, 495
GsuI CTGGAG 1 cut(s) 1217
HaeII RGCGCY 1 cut(s) 516
HaeIII GGCC 3 cut(s) 92, 119, 310
HapII CCGG 3 cut(s) 12, 18, 36
HgaI GACGC 2 cut(s) 51, 73
HhaI GCGC 2 cut(s) 429, 515
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 7 cut(s) 185, 479, 708, 813, 971, 1042, 1117
Hin6I GCGC 2 cut(s) 427, 513
HinP1I GCGC 2 cut(s) 427, 513
HincII GTYRAC 1 cut(s) 1293
HindII GTYRAC 1 cut(s) 1293
HindIII AAGCTT 1 cut(s) 230
HpaII CCGG 3 cut(s) 12, 18, 36
HphI GGTGA 4 cut(s) 147, 268, 463, 697
Hpy166II GTNNAC 1 cut(s) 1293
Hpy188I TCNGA 8 cut(s) 375, 499, 565, 649, 658, 664, 673, 853
Hpy188III TCNNGA 6 cut(s) 236, 609, 731, 992, 1085, 1114
Hpy8I GTNNAC 1 cut(s) 1293
Hpy99I CGWCG 3 cut(s) 70, 83, 1148
HpyAV CCTTC 4 cut(s) 37, 582, 704, 1114
HpyCH4III ACNGT 7 cut(s) 66, 341, 408, 461, 794, 941, 1309
HpyCH4IV ACGT 3 cut(s) 72, 907, 1295
HpyCH4V TGCA 5 cut(s) 129, 836, 957, 1004, 1197
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 191, 205, 408, 512
HpyF3I CTNAG 6 cut(s) 195, 372, 444, 562, 681, 915
HpySE526I ACGT 3 cut(s) 72, 907, 1295
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 7 cut(s) 185, 479, 708, 813, 971, 1042, 1117
HspAI GCGC 2 cut(s) 427, 513
Kzo9I GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
LmnI GCTCC 3 cut(s) 500, 949, 1236
Lsp1109I GCAGC 2 cut(s) 826, 1051
LweI GCATC 3 cut(s) 493, 823, 911
MaeI CTAG 4 cut(s) 138, 531, 975, 980
MaeII ACGT 3 cut(s) 72, 907, 1295
MaeIII GTNAC 7 cut(s) 85, 153, 736, 888, 941, 1025, 1043
MalI GATC 8 cut(s) 5, 285, 370, 480, 729, 821, 1083, 1157
MboI GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
MboII GAAGA 7 cut(s) 271, 362, 548, 686, 731, 747, 1129
MflI RGATCY 1 cut(s) 1155
MhlI GDGCHC 1 cut(s) 105
MlsI TGGCCA 1 cut(s) 310
MluCI AATT 6 cut(s) 332, 847, 960, 1020, 1132, 1185
MluNI TGGCCA 1 cut(s) 310
MlyI GAGTC 5 cut(s) 333, 411, 653, 659, 1196
MmeI TCCRAC 1 cut(s) 567
Mox20I TGGCCA 1 cut(s) 310
MroXI GAANNNNTTC 2 cut(s) 26, 847
MscI TGGCCA 1 cut(s) 310
MseI TTAA 3 cut(s) 150, 249, 335
Msp20I TGGCCA 1 cut(s) 310
MspA1I CMGCKG 1 cut(s) 817
MspCI CTTAAG 1 cut(s) 149
MspI CCGG 3 cut(s) 12, 18, 36
MspR9I CCNGG 5 cut(s) 19, 483, 517, 1034, 1235
MvaI CCWGG 4 cut(s) 483, 517, 1034, 1235
MvnI CGCG 4 cut(s) 45, 107, 237, 429
MwoI GCNNNNNNNGC 5 cut(s) 104, 191, 205, 408, 512
NciI CCSGG 1 cut(s) 19
NdeI CATATG 1 cut(s) 1000
NdeII GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
NlaIII CATG 7 cut(s) 185, 479, 708, 813, 971, 1042, 1117
NlaIV GGNNCC 5 cut(s) 16, 63, 164, 951, 1157
NmuCI GTSAC 6 cut(s) 85, 153, 736, 888, 941, 1043
NruI TCGCGA 1 cut(s) 237
NspI RCATGY 1 cut(s) 185
NspV TTCGAA 1 cut(s) 1299
PagI TCATGA 1 cut(s) 1113
PcsI WCGNNNNNNNCGW 2 cut(s) 62, 111
PdmI GAANNNNTTC 2 cut(s) 26, 847
PfeI GAWTC 5 cut(s) 521, 629, 688, 752, 859
Pfl23II CGTACG 1 cut(s) 69
PfoI TCCNGGA 1 cut(s) 17
PkrI GCNGC 5 cut(s) 61, 413, 816, 973, 1066
PleI GAGTC 5 cut(s) 332, 411, 653, 659, 1196
PpsI GAGTC 5 cut(s) 332, 411, 653, 659, 1196
PshAI GACNNNNGTC 1 cut(s) 773
Psp6I CCWGG 4 cut(s) 481, 515, 1032, 1233
PspFI CCCAGC 2 cut(s) 98, 491
PspGI CCWGG 4 cut(s) 481, 515, 1032, 1233
PspLI CGTACG 1 cut(s) 69
PspN4I GGNNCC 5 cut(s) 16, 63, 164, 951, 1157
PspPI GGNCC 3 cut(s) 162, 768, 775
PsuI RGATCY 1 cut(s) 1155
RruI TCGCGA 1 cut(s) 237
RsaI GTAC 4 cut(s) 71, 366, 580, 840
RsaNI GTAC 4 cut(s) 70, 365, 579, 839
SaqAI TTAA 3 cut(s) 150, 249, 335
SatI GCNGC 5 cut(s) 60, 412, 815, 972, 1065
Sau3AI GATC 8 cut(s) 3, 283, 368, 478, 727, 819, 1081, 1155
Sau96I GGNCC 3 cut(s) 162, 768, 775
SchI GAGTC 5 cut(s) 333, 411, 653, 659, 1196
ScrFI CCNGG 5 cut(s) 19, 483, 517, 1034, 1235
SduI GDGCHC 1 cut(s) 105
SfaNI GCATC 3 cut(s) 493, 823, 911
SfcI CTRYAG 1 cut(s) 1059
SfuI TTCGAA 1 cut(s) 1299
SinI GGWCC 3 cut(s) 162, 768, 775
SmlI CTYRAG 3 cut(s) 149, 763, 876
SmoI CTYRAG 3 cut(s) 149, 763, 876
SpeI ACTAGT 1 cut(s) 979
Sse9I AATT 6 cut(s) 332, 847, 960, 1020, 1132, 1185
SspMI CTAG 4 cut(s) 138, 531, 975, 980
StyD4I CCNGG 5 cut(s) 17, 481, 515, 1032, 1233
StyI CCWWGG 4 cut(s) 93, 158, 319, 744
TaaI ACNGT 7 cut(s) 66, 341, 408, 461, 794, 941, 1309
TaiI ACGT 3 cut(s) 75, 910, 1298
TaqI TCGA 3 cut(s) 1126, 1143, 1299
TaqII GACCGA 1 cut(s) 785
TasI AATT 6 cut(s) 332, 847, 960, 1020, 1132, 1185
TatI WGTACW 1 cut(s) 578
TauI GCSGC 3 cut(s) 62, 414, 974
TfiI GAWTC 5 cut(s) 521, 629, 688, 752, 859
Tru1I TTAA 3 cut(s) 150, 249, 335
Tru9I TTAA 3 cut(s) 150, 249, 335
TscAI CASTG 4 cut(s) 136, 277, 413, 799
TseFI GTSAC 6 cut(s) 85, 153, 736, 888, 941, 1043
TseI GCWGC 2 cut(s) 814, 1064
Tsp45I GTSAC 6 cut(s) 85, 153, 736, 888, 941, 1043
TspDTI ATGAA 5 cut(s) 19, 345, 765, 1102, 1130
TspRI CASTG 4 cut(s) 136, 277, 413, 799
Vha464I CTTAAG 1 cut(s) 149
VpaK11BI GGWCC 3 cut(s) 162, 768, 775
XapI RAATTY 1 cut(s) 960
XceI RCATGY 1 cut(s) 185
XcmI CCANNNNNNNNNTGG 1 cut(s) 583
XmnI GAANNNNTTC 2 cut(s) 26, 847
XspI CTAG 4 cut(s) 138, 531, 975, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.