Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0003954

Physical Location & Seq

Genomic Coordinates Reverse (-)

993320 .. 997933

Gene Structure 4614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g01340.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGATGGATGGGAACAAGCGAAACTTTTTCAAGAAACGCCCTAACATCCAGTTTAAAAGAAAAGGGGGTAACAACAACTATAAGAAGGGAAAGTGGAATGATTCTGGCCGTGAGCAACCTCCAGAGGATTACCAATCGCTCGACACTGTGTATCGTATTCTCTGCCCTTCTAAAAAGATCGGTGGTGTTATTGGGAAGGGTGGCAACATAGTCAAAGCCCTTAGAGAAGAGACCCGGGCAAAGATTTCGGTTTCTGATTCTGTTCTTGGCTCAGATGAGAGAGTAATTATTATCTATAGCTCTCCAACAAAAATTTCAAGCAAACAAAATAACAATGAAGATTCAGATCAGGGAAATGAAATGGAGCCGCATTGTGCTGCCCAGAATGCTCTGTTGAAAGTTCATGCCAGGATTGTAGAGGAAGATCTCTTTGGTGGAGTTACATTTGATGATGACAACGAGAACAGTGTTGTCACGACAAGACTTCTAGTTCCAAACAATACGGTAGGGTGTGTTCTTGGAAAGCGTGGAGATGTTATTCAAAGATTGCGAAGTGAGACGGGTGCAAGTATCCGTGTCCTTCCTGCAGATCAGCTTCCAACGTGTGCTATGGAAACTGATGAATTGGTGCAGATATCTGGAAAACCAAATGTGACAAAGAGGGCACTTTACGAAGTGTCTACTCTACTTCATCAGAATCCTAGGAAGGATAAGCCTCCTTCAGGCTTTCCTATGCCTATTGGTGGTCAGGGCTTTCATCCCCCTGGAGCCCCAACGAGTAATGCCCTTTCACCCAGAAATCCAATGTTGTCTAATCGAGCTCCTTCCCACACTATGCCGCCAATGCCATGGACAGGAGGATATGAAAACCGTTCTTCTGGATTTGCCCGAGGTGGTTTTAATGGGGTTTCTCCTGAACATGGGGGTGAAGCTCTAGCTCTAGCTGAGTTTTCTATGAAAATTTTGTGTTCAACTGGGAAAATTGGTGGGGTTATTGGCAAGGGCGGTTTTAATGTAAAACAGTTACAACTGGAAACAGGAGCCACTATTCATGTTCAGGATGCATCAATGGATTCAGAAGAATGTGTAATTCACGTCTCTGCTTTTGAGGCTTTGTGGAATCCCAGATCACAGACCATTGAGGCAATTCTTGAGCTTCAGAATGTAACAAGTGAATTCTCTGATAAAGGCATAATCGCTACCAGGCTTCTTGTACCATCAAGTAAAGTTGGCTGCCTCCTTGGACAAGGAGGTCAAGTTATAAATGAGATGAGAAGGAGAACCCAGGCTGATATCCGTGTTTACTCGAAGGATGATAGGCCTGCATGTGCAACTGAAGATGAAGAGCTTGTGCAGATTTCTGGGAACTTGGGTACCGCTAAAGATGCTTTGGCTGAGATTACATCAAGGCTGAGAGTGAGAACTCTGCGAGATACAAATGCTGGAGCAGAACCTGCTCCTGTTGGCCCTACGCACAGATTTGGTCTTGCAGGCCACTTACCTGGTGGGGGACCACTGCCAACACCTAGTGCAGTTGGAGCTGGAAGCTCTGGTGGATATGATCCTCTGAAGGTTAGTAGCCATCAATATCAACCACAGAGTCATCGAATTCCTCCAACTGCTTCTGGTTATCCAAGGGTCAACTATGCTATGGAGGGTAAGATCCCAACGAATGCAGTCGATTTTCCTGGAACAGTAGGGCGCAGCTTTTCCACTATTAGGGAGGTTGGCATATCAAGAGCGCAGCTCAAAGACTCCCAAGGTGGTGGCTTTGAACGTTCTGTTGAGATTGGCGGTTCTGATCACTTGAATGCAGCACAGAATATCCTTCGCCCATTCTTGGCTTCTGTTGATCAAAATGTGAGTTCTCAATCTGGTTCCTACCGCAGTGTAAATGCTCCACAAGGCTCCTACCACAAGATGATTCCTCAGCAAAGCCCCTACCAAATCAATTCTCAACAAAGCCCCTACCAACTCAATCCTCATCACAGCTCATACCGAATCAATCCTCAGCATAGCCCCTATCAAGTCAATGCTCCGCACAGCCCCTTCCGAACAAATGCTCAGGAAAGCCCCTATCAATTGAGCTCTCAACAAGGATCATACCCCAACACGAATGCTCCTCAAGGCGCCTACCACAACTATAATTCGCAACAAGGTGCCTACCAATACCATTACCGGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

729

Amino Acids

79.0

Weight (kDa)

8.92

Isoelectric Point (pI)

52.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003954)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170
malus_domestica	MD09G1087900.v1.1 MD17G1076800.v1.1 MD17G1076900.v1.1 MD17G1077600.v1.1
prunus_persica	Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1
pyrus_communis	pycom09g01340 pycom17g07720
rosa_chinensis	RchiOBHm_Chr2g0162761 RchiOBHm_Chr2g0162821 RchiOBHm_Chr2g0162871
rosa_laevigata	RLG00000021358
rosa_multiflora	Rmu_co8424937.1_g000001 Rmu_sc0006129.1_g000028
rosa_roxburghii	Rroxscaffold_2G00087750
rosa_rugosa	Rorug02G0498900 Rorug02G0498900 Rorug02G0499000
rosa_samantha	Rh2AG564900 Rh2BG577600 Rh2CG547400 Rh2DG587500
rosa_wichuraiana	Rw2G046750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1262
AasI	GACNNNNNNGTC	1 cut(s)	1251
Acc36I	ACCTGC	1 cut(s)	1462
Acc65I	GGTACC	1 cut(s)	1373
AccB1I	GGYRCC	3 cut(s)	1373, 2129, 2159
AccI	GTMKAC	1 cut(s)	680
AciI	CCGC	7 cut(s)	368, 839, 1005, 1377, 1794, 1885, 2039
AclI	AACGTT	1 cut(s)	1777
AclWI	GGATC	3 cut(s)	1556, 1657, 2107
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	4 cut(s)	312, 960, 1175, 1608
AcuI	CTGAAG	4 cut(s)	705, 1142, 1356, 1589
AcyI	GRCGYC	1 cut(s)	2130
AdeI	CACNNNGTG	1 cut(s)	1529
AfaI	GTAC	2 cut(s)	1215, 1375
AfiI	CCNNNNNNNGG	7 cut(s)	722, 743, 854, 920, 1508, 1719, 1840
AflIII	ACRYGT	1 cut(s)	602
AgsI	TTSAA	7 cut(s)	31, 318, 397, 542, 972, 1775, 1810
AjiI	CACGTC	1 cut(s)	1096
AjnI	CCWGG	6 cut(s)	407, 763, 1202, 1284, 1501, 1687
AjuI	GAANNNNNNNTTGG	4 cut(s)	298, 330, 414, 446
Alw21I	GWGCWC	2 cut(s)	823, 2090
Alw26I	GTCTC	3 cut(s)	224, 551, 1102
AlwI	GGATC	3 cut(s)	1556, 1657, 2107
AlwNI	CAGNNNCTG	1 cut(s)	1454
Ama87I	CYCGRG	2 cut(s)	234, 888
AoxI	GGCC	4 cut(s)	106, 1319, 1465, 1492
ApeKI	GCWGC	5 cut(s)	377, 1233, 1704, 1744, 1814
ApoI	RAATTY	4 cut(s)	312, 960, 1175, 1608
Asp718I	GGTACC	1 cut(s)	1373
AspA2I	CCTAGG	1 cut(s)	701
AspLEI	GCGC	3 cut(s)	1704, 1744, 2132
AspS9I	GGNCC	2 cut(s)	1466, 1511
AsuC2I	CCSGG	2 cut(s)	235, 236
AsuHPI	GGTGA	2 cut(s)	783, 938
AvaI	CYCGRG	2 cut(s)	234, 888
AvaII	GGWCC	1 cut(s)	1511
AvrII	CCTAGG	1 cut(s)	701
BaeGI	GKGCMC	1 cut(s)	667
BaeI	ACNNNNGTAYC	2 cut(s)	1357, 1390
BanI	GGYRCC	3 cut(s)	1373, 2129, 2159
BanII	GRGCYC	3 cut(s)	772, 823, 2090
Bbv12I	GWGCWC	2 cut(s)	823, 2090
BbvCI	CCTCAGC	2 cut(s)	1929, 2010
BbvI	GCAGC	5 cut(s)	364, 1220, 1716, 1756, 1826
BccI	CCATC	3 cut(s)	2, 1225, 1590
BceAI	ACGGC	1 cut(s)	93
BcgI	CGANNNNNNTGC	2 cut(s)	228, 262
BciT130I	CCWGG	6 cut(s)	409, 765, 1204, 1286, 1503, 1689
BciVI	GTATCC	1 cut(s)	581
BclI	TGATCA	2 cut(s)	1801, 1852
BcnI	CCSGG	2 cut(s)	235, 236
BcoDI	GTCTC	3 cut(s)	224, 551, 1102
BfaI	CTAG	6 cut(s)	488, 702, 935, 941, 1527, 2185
BfmI	CTRYAG	2 cut(s)	295, 585
BfoI	RGCGCY	1 cut(s)	2133
BfuAI	ACCTGC	1 cut(s)	1462
BfuI	GTATCC	1 cut(s)	581
BglII	AGATCT	1 cut(s)	424
BisI	GCNGC	7 cut(s)	368, 378, 839, 1234, 1705, 1745, 1815
BlnI	CCTAGG	1 cut(s)	701
BlsI	GCNGC	7 cut(s)	369, 379, 840, 1235, 1706, 1746, 1816
Bme1390I	CCNGG	8 cut(s)	235, 236, 409, 765, 1204, 1286, 1503, 1689
Bme18I	GGWCC	1 cut(s)	1511
BmeT110I	CYCGRG	2 cut(s)	234, 888
BmgBI	CACGTC	1 cut(s)	1096
BmgT120I	GGNCC	2 cut(s)	1466, 1511
BmiI	GGNNCC	9 cut(s)	366, 769, 1042, 1375, 1512, 1879, 1909, 2131, 2161
BmrFI	CCNGG	8 cut(s)	235, 236, 409, 765, 1204, 1286, 1503, 1689
BmrI	ACTGGG	1 cut(s)	984
BmsI	GCATC	3 cut(s)	1051, 1073, 1375
BmuI	ACTGGG	1 cut(s)	984
BplI	GAGNNNNNCTC	2 cut(s)	1731, 1763
BpmI	CTGGAG	3 cut(s)	105, 786, 1464
Bpu10I	CCTNAGC	3 cut(s)	1929, 2010, 2064
BpuEI	CTTGAG	2 cut(s)	1172, 2109
BpuMI	CCSGG	2 cut(s)	235, 236
BsaBI	GATNNNNATC	1 cut(s)	345
BsaHI	GRCGYC	1 cut(s)	2130
BsaI	GGTCTC	1 cut(s)	224
BsaJI	CCNNGG	9 cut(s)	234, 701, 763, 848, 889, 1240, 1284, 1634, 1759
BsaXI	ACNNNNNCTCC	4 cut(s)	1242, 1272, 2104, 2134
Bsc4I	CCNNNNNNNGG	7 cut(s)	722, 743, 854, 920, 1508, 1719, 1840
Bse118I	RCCGGY	1 cut(s)	2178
Bse1I	ACTGG	3 cut(s)	49, 979, 1035
Bse8I	GATNNNNATC	1 cut(s)	345
BseBI	CCWGG	6 cut(s)	409, 765, 1204, 1286, 1503, 1689
BseDI	CCNNGG	9 cut(s)	234, 701, 763, 848, 889, 1240, 1284, 1634, 1759
BseGI	GGATG	5 cut(s)	13, 45, 757, 1066, 1318
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	7 cut(s)	722, 743, 854, 920, 1508, 1719, 1840
BseMII	CTCAG	7 cut(s)	285, 936, 1386, 1403, 1943, 2024, 2078
BseNI	ACTGG	3 cut(s)	49, 979, 1035
BseRI	GAGGAG	1 cut(s)	2112
BseSI	GKGCMC	1 cut(s)	667
BseXI	GCAGC	5 cut(s)	364, 1220, 1716, 1756, 1826
BsgI	GTGCAG	3 cut(s)	650, 1373, 1551
BshFI	GGCC	4 cut(s)	108, 1321, 1467, 1494
BshNI	GGYRCC	3 cut(s)	1373, 2129, 2159
BsiHKAI	GWGCWC	2 cut(s)	823, 2090
BsiHKCI	CYCGRG	2 cut(s)	234, 888
BsiSI	CCGG	2 cut(s)	235, 2179
BslFI	GGGAC	1 cut(s)	1524
BslI	CCNNNNNNNGG	7 cut(s)	722, 743, 854, 920, 1508, 1719, 1840
BsmAI	GTCTC	3 cut(s)	224, 551, 1102
BsmBI	CGTCTC	2 cut(s)	551, 1102
BsmFI	GGGAC	1 cut(s)	1524
BsmI	GAATGC	4 cut(s)	391, 1678, 1816, 2122
BsnI	GGCC	4 cut(s)	108, 1321, 1467, 1494
Bso31I	GGTCTC	1 cut(s)	224
BsoBI	CYCGRG	2 cut(s)	234, 888
Bsp1286I	GDGCHC	4 cut(s)	667, 772, 823, 2090
Bsp19I	CCATGG	1 cut(s)	848
BspACI	CCGC	7 cut(s)	368, 839, 1005, 1377, 1794, 1885, 2039
BspANI	GGCC	4 cut(s)	108, 1321, 1467, 1494
BspCNI	CTCAG	7 cut(s)	284, 937, 1387, 1404, 1942, 2023, 2077
BspLI	GGNNCC	9 cut(s)	366, 769, 1042, 1375, 1512, 1879, 1909, 2131, 2161
BspMAI	CTGCAG	1 cut(s)	589
BspMI	ACCTGC	1 cut(s)	1462
BspPI	GGATC	3 cut(s)	1556, 1657, 2107
BspQI	GCTCTTC	1 cut(s)	1338
BspT107I	GGYRCC	3 cut(s)	1373, 2129, 2159
BspTNI	GGTCTC	1 cut(s)	224
BsrFI	RCCGGY	1 cut(s)	2178
BsrI	ACTGG	3 cut(s)	49, 979, 1035
BssAI	RCCGGY	1 cut(s)	2178
BssECI	CCNNGG	9 cut(s)	234, 701, 763, 848, 889, 1240, 1284, 1634, 1759
BssNI	GRCGYC	1 cut(s)	2130
BssT1I	CCWWGG	5 cut(s)	701, 848, 1240, 1634, 1759
Bst2UI	CCWGG	6 cut(s)	409, 765, 1204, 1286, 1503, 1689
Bst4CI	ACNGT	6 cut(s)	148, 467, 505, 872, 1023, 1696
Bst6I	CTCTTC	2 cut(s)	222, 1338
BstACI	GRCGYC	1 cut(s)	2130
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstC8I	GCNNGC	2 cut(s)	1323, 1492
BstDEI	CTNAG	8 cut(s)	221, 271, 945, 1395, 1412, 1929, 2010, 2064
BstDSI	CCRYGG	1 cut(s)	848
BstENI	CCTNNNNNAGG	1 cut(s)	720
BstF5I	GGATG	5 cut(s)	13, 45, 757, 1066, 1318
BstH2I	RGCGCY	1 cut(s)	2133
BstHHI	GCGC	3 cut(s)	1704, 1744, 2132
BstMAI	GTCTC	3 cut(s)	224, 551, 1102
BstMWI	GCNNNNNNNGC	6 cut(s)	386, 844, 1109, 1385, 1454, 1538
BstNI	CCWGG	6 cut(s)	409, 765, 1204, 1286, 1503, 1689
BstNSI	RCATGY	1 cut(s)	1329
BstSCI	CCNGG	8 cut(s)	233, 234, 407, 763, 1202, 1284, 1501, 1687
BstSFI	CTRYAG	2 cut(s)	295, 585
BstSLI	GKGCMC	1 cut(s)	667
BstV1I	GCAGC	5 cut(s)	364, 1220, 1716, 1756, 1826
BstX2I	RGATCY	2 cut(s)	424, 1662
BstXI	CCANNNNNNTGG	3 cut(s)	849, 1502, 1766
BstYI	RGATCY	2 cut(s)	424, 1662
BsuI	GTATCC	1 cut(s)	581
BsuRI	GGCC	4 cut(s)	108, 1321, 1467, 1494
BtgI	CCRYGG	1 cut(s)	848
BtrI	CACGTC	1 cut(s)	1096
BtsCI	GGATG	5 cut(s)	13, 45, 757, 1066, 1318
BtsI	GCAGTG	2 cut(s)	1514, 1894
BtsIMutI	CAGTG	4 cut(s)	144, 472, 1514, 1894
BveI	ACCTGC	1 cut(s)	1462
Cac8I	GCNNGC	2 cut(s)	1323, 1492
CaiI	CAGNNNCTG	1 cut(s)	1454
CfoI	GCGC	3 cut(s)	1704, 1744, 2132
Cfr10I	RCCGGY	1 cut(s)	2178
Cfr13I	GGNCC	2 cut(s)	1466, 1511
Cfr9I	CCCGGG	1 cut(s)	234
CsiI	ACCWGGT	1 cut(s)	1501
Csp6I	GTAC	2 cut(s)	1214, 1374
CviAII	CATG	5 cut(s)	404, 849, 920, 1052, 1326
CviQI	GTAC	2 cut(s)	1214, 1374
DdeI	CTNAG	8 cut(s)	221, 271, 945, 1395, 1412, 1929, 2010, 2064
DinI	GGCGCC	1 cut(s)	2131
DraI	TTTAAA	1 cut(s)	55
DraIII	CACNNNGTG	1 cut(s)	1529
DrdI	GACNNNNNNGTC	1 cut(s)	1251
DseDI	GACNNNNNNGTC	1 cut(s)	1251
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	2 cut(s)	222, 1338
EarI	CTCTTC	2 cut(s)	222, 1338
Ecl136II	GAGCTC	2 cut(s)	821, 2088
Eco130I	CCWWGG	5 cut(s)	701, 848, 1240, 1634, 1759
Eco147I	AGGCCT	1 cut(s)	1321
Eco24I	GRGCYC	3 cut(s)	772, 823, 2090
Eco31I	GGTCTC	1 cut(s)	224
Eco32I	GATATC	2 cut(s)	636, 1294
Eco47I	GGWCC	1 cut(s)	1511
Eco53kI	GAGCTC	2 cut(s)	821, 2088
Eco57I	CTGAAG	4 cut(s)	705, 1142, 1356, 1589
Eco88I	CYCGRG	2 cut(s)	234, 888
EcoICRI	GAGCTC	2 cut(s)	821, 2088
EcoNI	CCTNNNNNAGG	1 cut(s)	720
EcoRI	GAATTC	2 cut(s)	1175, 1608
EcoRII	CCWGG	6 cut(s)	407, 763, 1202, 1284, 1501, 1687
EcoRV	GATATC	2 cut(s)	636, 1294
EcoT14I	CCWWGG	5 cut(s)	701, 848, 1240, 1634, 1759
EcoT22I	ATGCAT	1 cut(s)	1066
EcoT38I	GRGCYC	3 cut(s)	772, 823, 2090
EgeI	GGCGCC	1 cut(s)	2131
EheI	GGCGCC	1 cut(s)	2131
ErhI	CCWWGG	5 cut(s)	701, 848, 1240, 1634, 1759
Esp3I	CGTCTC	2 cut(s)	551, 1102
FaeI	CATG	5 cut(s)	407, 852, 923, 1055, 1329
FalI	AAGNNNNNCTT	2 cut(s)	8, 40
FaqI	GGGAC	1 cut(s)	1524
FatI	CATG	5 cut(s)	403, 848, 919, 1051, 1325
FbaI	TGATCA	2 cut(s)	1801, 1852
FblI	GTMKAC	1 cut(s)	680
Fnu4HI	GCNGC	7 cut(s)	368, 378, 839, 1234, 1705, 1745, 1815
FokI	GGATG	5 cut(s)	20, 32, 744, 1073, 1325
FriOI	GRGCYC	3 cut(s)	772, 823, 2090
Fsp4HI	GCNGC	7 cut(s)	368, 378, 839, 1234, 1705, 1745, 1815
FspBI	CTAG	6 cut(s)	488, 702, 935, 941, 1527, 2185
GlaI	GCGC	3 cut(s)	1703, 1743, 2131
GluI	GCNGC	7 cut(s)	368, 378, 839, 1234, 1705, 1745, 1815
GsuI	CTGGAG	3 cut(s)	105, 786, 1464
HaeII	RGCGCY	1 cut(s)	2133
HaeIII	GGCC	4 cut(s)	108, 1321, 1467, 1494
HapII	CCGG	2 cut(s)	235, 2179
HhaI	GCGC	3 cut(s)	1704, 1744, 2132
Hin1I	GRCGYC	1 cut(s)	2130
Hin1II	CATG	5 cut(s)	407, 852, 923, 1055, 1329
Hin6I	GCGC	3 cut(s)	1702, 1742, 2130
HinP1I	GCGC	3 cut(s)	1702, 1742, 2130
HincII	GTYRAC	1 cut(s)	1642
HindII	GTYRAC	1 cut(s)	1642
HpaII	CCGG	2 cut(s)	235, 2179
HphI	GGTGA	2 cut(s)	783, 938
Hpy166II	GTNNAC	3 cut(s)	681, 1303, 1642
Hpy8I	GTNNAC	3 cut(s)	681, 1303, 1642
HpyCH4III	ACNGT	6 cut(s)	148, 467, 505, 872, 1023, 1696
HpyCH4IV	ACGT	3 cut(s)	602, 1095, 1777
HpyF10VI	GCNNNNNNNGC	6 cut(s)	386, 844, 1109, 1385, 1454, 1538
HpyF3I	CTNAG	8 cut(s)	221, 271, 945, 1395, 1412, 1929, 2010, 2064
HpySE526I	ACGT	3 cut(s)	602, 1095, 1777
Hsp92I	GRCGYC	1 cut(s)	2130
Hsp92II	CATG	5 cut(s)	407, 852, 923, 1055, 1329
HspAI	GCGC	3 cut(s)	1702, 1742, 2130
KasI	GGCGCC	1 cut(s)	2129
KpnI	GGTACC	1 cut(s)	1377
Ksp22I	TGATCA	2 cut(s)	1801, 1852
LguI	GCTCTTC	1 cut(s)	1338
Lsp1109I	GCAGC	5 cut(s)	364, 1220, 1716, 1756, 1826
LweI	GCATC	3 cut(s)	1051, 1073, 1375
MabI	ACCWGGT	1 cut(s)	1501
MaeI	CTAG	6 cut(s)	488, 702, 935, 941, 1527, 2185
MaeII	ACGT	3 cut(s)	602, 1095, 1777
MaeIII	GTNAC	6 cut(s)	68, 439, 472, 652, 1023, 1165
MboII	GAAGA	7 cut(s)	239, 350, 434, 867, 1091, 1349, 1355
MfeI	CAATTG	1 cut(s)	2081
MflI	RGATCY	2 cut(s)	424, 1662
MhlI	GDGCHC	4 cut(s)	667, 772, 823, 2090
Mly113I	GGCGCC	1 cut(s)	2130
MlyI	GAGTC	2 cut(s)	1609, 1748
MmeI	TCCRAC	4 cut(s)	329, 623, 1516, 1640
Mph1103I	ATGCAT	1 cut(s)	1066
MseI	TTAA	3 cut(s)	54, 900, 1011
MslI	CAYNNNNRTG	2 cut(s)	924, 1809
MspI	CCGG	2 cut(s)	235, 2179
MspR9I	CCNGG	8 cut(s)	235, 236, 409, 765, 1204, 1286, 1503, 1689
MunI	CAATTG	1 cut(s)	2081
Mva1269I	GAATGC	4 cut(s)	391, 1678, 1816, 2122
MvaI	CCWGG	6 cut(s)	409, 765, 1204, 1286, 1503, 1689
MwoI	GCNNNNNNNGC	6 cut(s)	386, 844, 1109, 1385, 1454, 1538
NarI	GGCGCC	1 cut(s)	2130
NciI	CCSGG	2 cut(s)	235, 236
NcoI	CCATGG	1 cut(s)	848
NlaIII	CATG	5 cut(s)	407, 852, 923, 1055, 1329
NlaIV	GGNNCC	9 cut(s)	366, 769, 1042, 1375, 1512, 1879, 1909, 2131, 2161
NmuCI	GTSAC	2 cut(s)	472, 652
NsiI	ATGCAT	1 cut(s)	1066
NspI	RCATGY	1 cut(s)	1329
PceI	AGGCCT	1 cut(s)	1321
PciSI	GCTCTTC	1 cut(s)	1338
PctI	GAATGC	4 cut(s)	391, 1678, 1816, 2122
PfeI	GAWTC	8 cut(s)	101, 257, 341, 697, 1073, 1120, 1924, 2001
PfoI	TCCNGGA	1 cut(s)	1687
PkrI	GCNGC	7 cut(s)	369, 379, 840, 1235, 1706, 1746, 1816
PleI	GAGTC	2 cut(s)	1608, 1748
PluTI	GGCGCC	1 cut(s)	2133
PpsI	GAGTC	2 cut(s)	1608, 1748
PsiI	TTATAA	1 cut(s)	1262
Psp124BI	GAGCTC	2 cut(s)	823, 2090
Psp1406I	AACGTT	1 cut(s)	1777
Psp6I	CCWGG	6 cut(s)	407, 763, 1202, 1284, 1501, 1687
PspGI	CCWGG	6 cut(s)	407, 763, 1202, 1284, 1501, 1687
PspN4I	GGNNCC	9 cut(s)	366, 769, 1042, 1375, 1512, 1879, 1909, 2131, 2161
PspPI	GGNCC	2 cut(s)	1466, 1511
PsrI	GAACNNNNNNTAC	2 cut(s)	498, 530
PstI	CTGCAG	1 cut(s)	589
PstNI	CAGNNNCTG	1 cut(s)	1454
PsuI	RGATCY	2 cut(s)	424, 1662
RsaI	GTAC	2 cut(s)	1215, 1375
RsaNI	GTAC	2 cut(s)	1214, 1374
RseI	CAYNNNNRTG	2 cut(s)	924, 1809
SacI	GAGCTC	2 cut(s)	823, 2090
SapI	GCTCTTC	1 cut(s)	1338
SaqAI	TTAA	3 cut(s)	54, 900, 1011
SatI	GCNGC	7 cut(s)	368, 378, 839, 1234, 1705, 1745, 1815
Sau96I	GGNCC	2 cut(s)	1466, 1511
SchI	GAGTC	2 cut(s)	1609, 1748
ScrFI	CCNGG	8 cut(s)	235, 236, 409, 765, 1204, 1286, 1503, 1689
SduI	GDGCHC	4 cut(s)	667, 772, 823, 2090
SexAI	ACCWGGT	1 cut(s)	1501
SfaNI	GCATC	3 cut(s)	1051, 1073, 1375
SfcI	CTRYAG	2 cut(s)	295, 585
SfoI	GGCGCC	1 cut(s)	2131
SinI	GGWCC	1 cut(s)	1511
SmaI	CCCGGG	1 cut(s)	236
SmiMI	CAYNNNNRTG	2 cut(s)	924, 1809
SmlI	CTYRAG	2 cut(s)	1151, 2124
SmoI	CTYRAG	2 cut(s)	1151, 2124
SseBI	AGGCCT	1 cut(s)	1321
SsiI	CCGC	7 cut(s)	368, 839, 1005, 1377, 1794, 1885, 2039
SspDI	GGCGCC	1 cut(s)	2129
SspMI	CTAG	6 cut(s)	488, 702, 935, 941, 1527, 2185
SstI	GAGCTC	2 cut(s)	823, 2090
StuI	AGGCCT	1 cut(s)	1321
StyD4I	CCNGG	8 cut(s)	233, 234, 407, 763, 1202, 1284, 1501, 1687
StyI	CCWWGG	5 cut(s)	701, 848, 1240, 1634, 1759
TaaI	ACNGT	6 cut(s)	148, 467, 505, 872, 1023, 1696
TaiI	ACGT	3 cut(s)	605, 1098, 1780
TaqI	TCGA	5 cut(s)	141, 817, 1307, 1606, 1680
TauI	GCSGC	2 cut(s)	370, 841
TfiI	GAWTC	8 cut(s)	101, 257, 341, 697, 1073, 1120, 1924, 2001
Tru1I	TTAA	3 cut(s)	54, 900, 1011
Tru9I	TTAA	3 cut(s)	54, 900, 1011
TscAI	CASTG	4 cut(s)	151, 472, 1521, 1894
TseFI	GTSAC	2 cut(s)	472, 652
TseI	GCWGC	5 cut(s)	377, 1233, 1704, 1744, 1814
Tsp45I	GTSAC	2 cut(s)	472, 652
TspGWI	ACGGA	2 cut(s)	563, 1286
TspMI	CCCGGG	1 cut(s)	234
TspRI	CASTG	4 cut(s)	151, 472, 1521, 1894
VpaK11BI	GGWCC	1 cut(s)	1511
XagI	CCTNNNNNAGG	1 cut(s)	720
XapI	RAATTY	4 cut(s)	312, 960, 1175, 1608
XceI	RCATGY	1 cut(s)	1329
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1502
XmaI	CCCGGG	1 cut(s)	234
XmaJI	CCTAGG	1 cut(s)	701
XmiI	GTMKAC	1 cut(s)	680
XspI	CTAG	6 cut(s)	488, 702, 935, 941, 1527, 2185
Zsp2I	ATGCAT	1 cut(s)	1066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.