K homology RNA-binding domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 |
| malus_domestica | MD09G1087900.v1.1 MD17G1076800.v1.1 MD17G1076900.v1.1 MD17G1077600.v1.1 |
| prunus_persica | Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 |
| pyrus_communis | pycom09g01340 pycom17g07720 |
| rosa_chinensis | RchiOBHm_Chr2g0162761 RchiOBHm_Chr2g0162821 RchiOBHm_Chr2g0162871 |
| rosa_laevigata | RLG00000021358 |
| rosa_multiflora | Rmu_co8424937.1_g000001 Rmu_sc0006129.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00087750 |
| rosa_rugosa | Rorug02G0498900 Rorug02G0498900 Rorug02G0499000 |
| rosa_samantha | Rh2AG564900 Rh2BG577600 Rh2CG547400 Rh2DG587500 |
| rosa_wichuraiana | Rw2G046750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 828, 1368 |
| AccB1I | GGYRCC | 1 cut(s) | 1631 |
| AccI | GTMKAC | 2 cut(s) | 47, 934 |
| AccIII | TCCGGA | 1 cut(s) | 5 |
| AciI | CCGC | 2 cut(s) | 275, 472 |
| AclWI | GGATC | 5 cut(s) | 263, 911, 1099, 1141, 1519 |
| AcsI | RAATTY | 1 cut(s) | 1103 |
| AcuI | CTGAAG | 4 cut(s) | 279, 491, 711, 1172 |
| AdeI | CACNNNGTG | 2 cut(s) | 884, 1541 |
| AfaI | GTAC | 5 cut(s) | 547, 659, 1463, 1577, 1643 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 89, 110, 215, 863, 1390 |
| AflIII | ACRYGT | 2 cut(s) | 439, 1135 |
| AgsI | TTSAA | 4 cut(s) | 290, 515, 1079, 1168 |
| AjiI | CACGTC | 1 cut(s) | 19 |
| AjnI | CCWGG | 3 cut(s) | 130, 154, 639 |
| Alw21I | GWGCWC | 3 cut(s) | 34, 1228, 1504 |
| Alw26I | GTCTC | 1 cut(s) | 457 |
| AlwI | GGATC | 5 cut(s) | 263, 911, 1099, 1141, 1519 |
| Ama87I | CYCGRG | 1 cut(s) | 249 |
| Aor13HI | TCCGGA | 1 cut(s) | 5 |
| AoxI | GGCC | 5 cut(s) | 170, 674, 820, 1191, 1456 |
| ApeKI | GCWGC | 8 cut(s) | 148, 588, 686, 849, 900, 974, 1172, 1369 |
| ApoI | RAATTY | 1 cut(s) | 1103 |
| AseI | ATTAAT | 1 cut(s) | 618 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 232 |
| AspLEI | GCGC | 2 cut(s) | 829, 1369 |
| AspS9I | GGNCC | 5 cut(s) | 821, 839, 1154, 1192, 1457 |
| AsuHPI | GGTGA | 2 cut(s) | 278, 1280 |
| AvaI | CYCGRG | 1 cut(s) | 249 |
| AvaII | GGWCC | 2 cut(s) | 839, 1154 |
| BanI | GGYRCC | 1 cut(s) | 1631 |
| BanII | GRGCYC | 1 cut(s) | 139 |
| Bbv12I | GWGCWC | 3 cut(s) | 34, 1228, 1504 |
| BbvI | GCAGC | 8 cut(s) | 135, 575, 698, 861, 912, 961, 1184, 1381 |
| BccI | CCATC | 2 cut(s) | 208, 580 |
| BciT130I | CCWGG | 3 cut(s) | 132, 156, 641 |
| BclI | TGATCA | 2 cut(s) | 1159, 1285 |
| BcoDI | GTCTC | 1 cut(s) | 457 |
| BfaI | CTAG | 3 cut(s) | 558, 882, 962 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1199 |
| BisI | GCNGC | 8 cut(s) | 149, 589, 687, 850, 901, 975, 1173, 1370 |
| BlpI | GCTNAGC | 3 cut(s) | 1227, 1395, 1476 |
| BlsI | GCNGC | 8 cut(s) | 150, 590, 688, 851, 902, 976, 1174, 1371 |
| Bme1390I | CCNGG | 3 cut(s) | 132, 156, 641 |
| Bme18I | GGWCC | 2 cut(s) | 839, 1154 |
| BmeT110I | CYCGRG | 1 cut(s) | 249 |
| BmgBI | CACGTC | 1 cut(s) | 19 |
| BmgT120I | GGNCC | 5 cut(s) | 821, 839, 1154, 1192, 1457 |
| BmiI | GGNNCC | 5 cut(s) | 136, 183, 397, 1267, 1633 |
| BmrFI | CCNGG | 3 cut(s) | 132, 156, 641 |
| BmsI | GCATC | 5 cut(s) | 67, 406, 428, 600, 730 |
| BpmI | CTGGAG | 1 cut(s) | 819 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1227, 1395, 1476 |
| BsaAI | YACGTR | 2 cut(s) | 71, 1575 |
| BsaJI | CCNNGG | 5 cut(s) | 209, 479, 595, 639, 1150 |
| BsaWI | WCCGGW | 2 cut(s) | 5, 13 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 597, 627 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 89, 110, 215, 863, 1390 |
| Bse118I | RCCGGY | 1 cut(s) | 970 |
| Bse1I | ACTGG | 2 cut(s) | 1051, 1639 |
| BseAI | TCCGGA | 1 cut(s) | 5 |
| BseBI | CCWGG | 3 cut(s) | 132, 156, 641 |
| BseDI | CCNNGG | 5 cut(s) | 209, 479, 595, 639, 1150 |
| BseGI | GGATG | 3 cut(s) | 219, 421, 591 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 89, 110, 215, 863, 1390 |
| BseMII | CTCAG | 8 cut(s) | 291, 444, 741, 758, 1134, 1241, 1409, 1490 |
| BseNI | ACTGG | 2 cut(s) | 1051, 1639 |
| BseRI | GAGGAG | 1 cut(s) | 267 |
| BseXI | GCAGC | 8 cut(s) | 135, 575, 698, 861, 912, 961, 1184, 1381 |
| BseYI | CCCAGC | 1 cut(s) | 329 |
| BsgI | GTGCAG | 2 cut(s) | 705, 728 |
| BshFI | GGCC | 5 cut(s) | 172, 676, 822, 1193, 1458 |
| BshNI | GGYRCC | 1 cut(s) | 1631 |
| BsiHKAI | GWGCWC | 3 cut(s) | 34, 1228, 1504 |
| BsiHKCI | CYCGRG | 1 cut(s) | 249 |
| BsiSI | CCGG | 3 cut(s) | 6, 14, 971 |
| BslFI | GGGAC | 2 cut(s) | 291, 1335 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 89, 110, 215, 863, 1390 |
| BsmAI | GTCTC | 1 cut(s) | 457 |
| BsmFI | GGGAC | 2 cut(s) | 291, 1335 |
| BsmI | GAATGC | 3 cut(s) | 873, 1174, 1342 |
| BsnI | GGCC | 5 cut(s) | 172, 676, 822, 1193, 1458 |
| BsoBI | CYCGRG | 1 cut(s) | 249 |
| Bsp1286I | GDGCHC | 4 cut(s) | 34, 139, 1228, 1504 |
| Bsp13I | TCCGGA | 1 cut(s) | 5 |
| Bsp143I | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1227, 1395, 1476 |
| Bsp19I | CCATGG | 1 cut(s) | 209 |
| BspACI | CCGC | 2 cut(s) | 275, 472 |
| BspANI | GGCC | 5 cut(s) | 172, 676, 822, 1193, 1458 |
| BspCNI | CTCAG | 8 cut(s) | 292, 443, 742, 759, 1135, 1240, 1408, 1489 |
| BspEI | TCCGGA | 1 cut(s) | 5 |
| BspLI | GGNNCC | 5 cut(s) | 136, 183, 397, 1267, 1633 |
| BspPI | GGATC | 5 cut(s) | 263, 911, 1099, 1141, 1519 |
| BspQI | GCTCTTC | 2 cut(s) | 693, 798 |
| BspT107I | GGYRCC | 1 cut(s) | 1631 |
| BsrFI | RCCGGY | 1 cut(s) | 970 |
| BsrI | ACTGG | 2 cut(s) | 1051, 1639 |
| BssAI | RCCGGY | 1 cut(s) | 970 |
| BssECI | CCNNGG | 5 cut(s) | 209, 479, 595, 639, 1150 |
| BssMI | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| BssT1I | CCWWGG | 3 cut(s) | 209, 479, 595 |
| Bst2UI | CCWGG | 3 cut(s) | 132, 156, 641 |
| Bst4CI | ACNGT | 5 cut(s) | 36, 194, 378, 1001, 1550 |
| Bst6I | CTCTTC | 3 cut(s) | 693, 798, 1074 |
| BstBAI | YACGTR | 2 cut(s) | 71, 1575 |
| BstC8I | GCNNGC | 5 cut(s) | 810, 854, 898, 972, 1569 |
| BstDEI | CTNAG | 8 cut(s) | 300, 430, 750, 767, 1143, 1227, 1395, 1476 |
| BstDSI | CCRYGG | 2 cut(s) | 209, 1150 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 861 |
| BstF5I | GGATG | 3 cut(s) | 219, 421, 591 |
| BstHHI | GCGC | 2 cut(s) | 829, 1369 |
| BstKTI | GATC | 8 cut(s) | 271, 552, 919, 1094, 1149, 1162, 1288, 1514 |
| BstMAI | GTCTC | 1 cut(s) | 457 |
| BstMBI | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 205, 464, 740, 893, 1199 |
| BstNI | CCWGG | 3 cut(s) | 132, 156, 641 |
| BstNSI | RCATGY | 1 cut(s) | 812 |
| BstSCI | CCNGG | 3 cut(s) | 130, 154, 639 |
| BstSNI | TACGTA | 1 cut(s) | 1575 |
| BstV1I | GCAGC | 8 cut(s) | 135, 575, 698, 861, 912, 961, 1184, 1381 |
| BstX2I | RGATCY | 1 cut(s) | 1146 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 210 |
| BstYI | RGATCY | 1 cut(s) | 1146 |
| BsuRI | GGCC | 5 cut(s) | 172, 676, 822, 1193, 1458 |
| BtgI | CCRYGG | 2 cut(s) | 209, 1150 |
| BtrI | CACGTC | 1 cut(s) | 19 |
| BtsCI | GGATG | 3 cut(s) | 219, 421, 591 |
| BtsI | GCAGTG | 1 cut(s) | 1038 |
| BtsIMutI | CAGTG | 3 cut(s) | 32, 1006, 1038 |
| Cac8I | GCNNGC | 5 cut(s) | 810, 854, 898, 972, 1569 |
| CfoI | GCGC | 2 cut(s) | 829, 1369 |
| Cfr10I | RCCGGY | 1 cut(s) | 970 |
| Cfr13I | GGNCC | 5 cut(s) | 821, 839, 1154, 1192, 1457 |
| Csp6I | GTAC | 5 cut(s) | 546, 658, 1462, 1576, 1642 |
| CviAII | CATG | 7 cut(s) | 210, 281, 407, 809, 938, 1198, 1304 |
| CviQI | GTAC | 5 cut(s) | 546, 658, 1462, 1576, 1642 |
| DdeI | CTNAG | 8 cut(s) | 300, 430, 750, 767, 1143, 1227, 1395, 1476 |
| DpnI | GATC | 8 cut(s) | 270, 551, 918, 1093, 1148, 1161, 1287, 1513 |
| DpnII | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| DraIII | CACNNNGTG | 2 cut(s) | 884, 1541 |
| Eam1104I | CTCTTC | 3 cut(s) | 693, 798, 1074 |
| EarI | CTCTTC | 3 cut(s) | 693, 798, 1074 |
| Eco105I | TACGTA | 1 cut(s) | 1575 |
| Eco130I | CCWWGG | 3 cut(s) | 209, 479, 595 |
| Eco147I | AGGCCT | 1 cut(s) | 676 |
| Eco24I | GRGCYC | 1 cut(s) | 139 |
| Eco32I | GATATC | 2 cut(s) | 714, 959 |
| Eco47I | GGWCC | 2 cut(s) | 839, 1154 |
| Eco57I | CTGAAG | 4 cut(s) | 279, 491, 711, 1172 |
| Eco88I | CYCGRG | 1 cut(s) | 249 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 861 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1192 |
| EcoRII | CCWGG | 3 cut(s) | 130, 154, 639 |
| EcoRV | GATATC | 2 cut(s) | 714, 959 |
| EcoT14I | CCWWGG | 3 cut(s) | 209, 479, 595 |
| EcoT22I | ATGCAT | 1 cut(s) | 421 |
| EcoT38I | GRGCYC | 1 cut(s) | 139 |
| ErhI | CCWWGG | 3 cut(s) | 209, 479, 595 |
| FaeI | CATG | 7 cut(s) | 213, 284, 410, 812, 941, 1201, 1307 |
| FaqI | GGGAC | 2 cut(s) | 291, 1335 |
| FatI | CATG | 7 cut(s) | 209, 280, 406, 808, 937, 1197, 1303 |
| FauI | CCCGC | 1 cut(s) | 268 |
| FbaI | TGATCA | 2 cut(s) | 1159, 1285 |
| FblI | GTMKAC | 2 cut(s) | 47, 934 |
| Fnu4HI | GCNGC | 8 cut(s) | 149, 589, 687, 850, 901, 975, 1173, 1370 |
| FokI | GGATG | 3 cut(s) | 226, 428, 578 |
| FriOI | GRGCYC | 1 cut(s) | 139 |
| Fsp4HI | GCNGC | 8 cut(s) | 149, 589, 687, 850, 901, 975, 1173, 1370 |
| FspBI | CTAG | 3 cut(s) | 558, 882, 962 |
| FspI | TGCGCA | 2 cut(s) | 828, 1368 |
| GlaI | GCGC | 2 cut(s) | 828, 1368 |
| GluI | GCNGC | 8 cut(s) | 149, 589, 687, 850, 901, 975, 1173, 1370 |
| GsaI | CCCAGC | 1 cut(s) | 333 |
| GsuI | CTGGAG | 1 cut(s) | 819 |
| HaeIII | GGCC | 5 cut(s) | 172, 676, 822, 1193, 1458 |
| HapII | CCGG | 3 cut(s) | 6, 14, 971 |
| HhaI | GCGC | 2 cut(s) | 829, 1369 |
| Hin1II | CATG | 7 cut(s) | 213, 284, 410, 812, 941, 1201, 1307 |
| Hin6I | GCGC | 2 cut(s) | 827, 1367 |
| HinP1I | GCGC | 2 cut(s) | 827, 1367 |
| HincII | GTYRAC | 1 cut(s) | 997 |
| HindII | GTYRAC | 1 cut(s) | 997 |
| HindIII | AAGCTT | 1 cut(s) | 291 |
| HinfI | GANTC | 8 cut(s) | 64, 428, 445, 475, 993, 1018, 1037, 1112 |
| HpaII | CCGG | 3 cut(s) | 6, 14, 971 |
| HphI | GGTGA | 2 cut(s) | 278, 1280 |
| Hpy166II | GTNNAC | 4 cut(s) | 48, 658, 935, 997 |
| Hpy188I | TCNGA | 4 cut(s) | 63, 433, 538, 1285 |
| Hpy188III | TCNNGA | 8 cut(s) | 6, 240, 413, 553, 762, 1089, 1095, 1157 |
| Hpy8I | GTNNAC | 4 cut(s) | 48, 658, 935, 997 |
| HpyAV | CCTTC | 4 cut(s) | 195, 624, 852, 1196 |
| HpyCH4III | ACNGT | 5 cut(s) | 36, 194, 378, 1001, 1550 |
| HpyCH4IV | ACGT | 5 cut(s) | 18, 70, 439, 1135, 1574 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 205, 464, 740, 893, 1199 |
| HpyF3I | CTNAG | 8 cut(s) | 300, 430, 750, 767, 1143, 1227, 1395, 1476 |
| HpySE526I | ACGT | 5 cut(s) | 18, 70, 439, 1135, 1574 |
| Hsp92II | CATG | 7 cut(s) | 213, 284, 410, 812, 941, 1201, 1307 |
| HspAI | GCGC | 2 cut(s) | 827, 1367 |
| Kpn2I | TCCGGA | 1 cut(s) | 5 |
| KroI | GCCGGC | 1 cut(s) | 970 |
| KroNI | GCCGGC | 1 cut(s) | 972 |
| Ksp22I | TGATCA | 2 cut(s) | 1159, 1285 |
| Kzo9I | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| LguI | GCTCTTC | 2 cut(s) | 693, 798 |
| Lsp1109I | GCAGC | 8 cut(s) | 135, 575, 698, 861, 912, 961, 1184, 1381 |
| LweI | GCATC | 5 cut(s) | 67, 406, 428, 600, 730 |
| MaeI | CTAG | 3 cut(s) | 558, 882, 962 |
| MaeII | ACGT | 5 cut(s) | 18, 70, 439, 1135, 1574 |
| MaeIII | GTNAC | 2 cut(s) | 378, 1550 |
| MalI | GATC | 8 cut(s) | 270, 551, 918, 1093, 1148, 1161, 1287, 1513 |
| MboI | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| MboII | GAAGA | 6 cut(s) | 446, 497, 704, 710, 815, 1091 |
| MfeI | CAATTG | 1 cut(s) | 492 |
| MflI | RGATCY | 1 cut(s) | 1146 |
| MhlI | GDGCHC | 4 cut(s) | 34, 139, 1228, 1504 |
| MluCI | AATT | 6 cut(s) | 336, 492, 501, 530, 888, 1103 |
| MlyI | GAGTC | 3 cut(s) | 422, 1002, 1106 |
| Mph1103I | ATGCAT | 1 cut(s) | 421 |
| MroI | TCCGGA | 1 cut(s) | 5 |
| MroNI | GCCGGC | 1 cut(s) | 970 |
| MroXI | GAANNNNTTC | 1 cut(s) | 232 |
| MseI | TTAA | 6 cut(s) | 261, 366, 618, 1557, 1587, 1617 |
| MslI | CAYNNNNRTG | 3 cut(s) | 942, 1308, 1443 |
| MspA1I | CMGCKG | 2 cut(s) | 299, 689 |
| MspI | CCGG | 3 cut(s) | 6, 14, 971 |
| MspR9I | CCNGG | 3 cut(s) | 132, 156, 641 |
| MunI | CAATTG | 1 cut(s) | 492 |
| Mva1269I | GAATGC | 3 cut(s) | 873, 1174, 1342 |
| MvaI | CCWGG | 3 cut(s) | 132, 156, 641 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 205, 464, 740, 893, 1199 |
| NaeI | GCCGGC | 1 cut(s) | 972 |
| NcoI | CCATGG | 1 cut(s) | 209 |
| NdeII | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| NgoMIV | GCCGGC | 1 cut(s) | 970 |
| NlaIII | CATG | 7 cut(s) | 213, 284, 410, 812, 941, 1201, 1307 |
| NlaIV | GGNNCC | 5 cut(s) | 136, 183, 397, 1267, 1633 |
| NmeAIII | GCCGAG | 1 cut(s) | 1237 |
| NsbI | TGCGCA | 2 cut(s) | 828, 1368 |
| NsiI | ATGCAT | 1 cut(s) | 421 |
| NspI | RCATGY | 1 cut(s) | 812 |
| PaeI | GCATGC | 1 cut(s) | 812 |
| PaeR7I | CTCGAG | 1 cut(s) | 249 |
| PceI | AGGCCT | 1 cut(s) | 676 |
| PciSI | GCTCTTC | 2 cut(s) | 693, 798 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 445, 1132 |
| PctI | GAATGC | 3 cut(s) | 873, 1174, 1342 |
| PdiI | GCCGGC | 1 cut(s) | 972 |
| PdmI | GAANNNNTTC | 1 cut(s) | 232 |
| PfeI | GAWTC | 5 cut(s) | 64, 445, 475, 1018, 1037 |
| PkrI | GCNGC | 8 cut(s) | 150, 590, 688, 851, 902, 976, 1174, 1371 |
| PleI | GAGTC | 3 cut(s) | 422, 1001, 1106 |
| PpsI | GAGTC | 3 cut(s) | 422, 1001, 1106 |
| Ppu21I | YACGTR | 2 cut(s) | 71, 1575 |
| PshBI | ATTAAT | 1 cut(s) | 618 |
| Psp6I | CCWGG | 3 cut(s) | 130, 154, 639 |
| PspFI | CCCAGC | 1 cut(s) | 329 |
| PspGI | CCWGG | 3 cut(s) | 130, 154, 639 |
| PspN4I | GGNNCC | 5 cut(s) | 136, 183, 397, 1267, 1633 |
| PspPI | GGNCC | 5 cut(s) | 821, 839, 1154, 1192, 1457 |
| PspXI | VCTCGAGB | 1 cut(s) | 249 |
| PsuI | RGATCY | 1 cut(s) | 1146 |
| PvuII | CAGCTG | 2 cut(s) | 299, 689 |
| RsaI | GTAC | 5 cut(s) | 547, 659, 1463, 1577, 1643 |
| RsaNI | GTAC | 5 cut(s) | 546, 658, 1462, 1576, 1642 |
| RseI | CAYNNNNRTG | 3 cut(s) | 942, 1308, 1443 |
| SapI | GCTCTTC | 2 cut(s) | 693, 798 |
| SaqAI | TTAA | 6 cut(s) | 261, 366, 618, 1557, 1587, 1617 |
| SatI | GCNGC | 8 cut(s) | 149, 589, 687, 850, 901, 975, 1173, 1370 |
| Sau3AI | GATC | 8 cut(s) | 268, 549, 916, 1091, 1146, 1159, 1285, 1511 |
| Sau96I | GGNCC | 5 cut(s) | 821, 839, 1154, 1192, 1457 |
| SchI | GAGTC | 3 cut(s) | 422, 1002, 1106 |
| ScrFI | CCNGG | 3 cut(s) | 132, 156, 641 |
| SduI | GDGCHC | 4 cut(s) | 34, 139, 1228, 1504 |
| SfaNI | GCATC | 5 cut(s) | 67, 406, 428, 600, 730 |
| Sfr274I | CTCGAG | 1 cut(s) | 249 |
| SinI | GGWCC | 2 cut(s) | 839, 1154 |
| SlaI | CTCGAG | 1 cut(s) | 249 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 942, 1308, 1443 |
| SmlI | CTYRAG | 1 cut(s) | 249 |
| SmoI | CTYRAG | 1 cut(s) | 249 |
| SnaBI | TACGTA | 1 cut(s) | 1575 |
| SphI | GCATGC | 1 cut(s) | 812 |
| Sse9I | AATT | 6 cut(s) | 336, 492, 501, 530, 888, 1103 |
| SseBI | AGGCCT | 1 cut(s) | 676 |
| SsiI | CCGC | 2 cut(s) | 275, 472 |
| SspI | AATATT | 1 cut(s) | 403 |
| SspMI | CTAG | 3 cut(s) | 558, 882, 962 |
| StuI | AGGCCT | 1 cut(s) | 676 |
| StyD4I | CCNGG | 3 cut(s) | 130, 154, 639 |
| StyI | CCWWGG | 3 cut(s) | 209, 479, 595 |
| TaaI | ACNGT | 5 cut(s) | 36, 194, 378, 1001, 1550 |
| TaiI | ACGT | 5 cut(s) | 21, 73, 442, 1138, 1577 |
| TaqI | TCGA | 6 cut(s) | 250, 462, 575, 662, 910, 1357 |
| TasI | AATT | 6 cut(s) | 336, 492, 501, 530, 888, 1103 |
| TatI | WGTACW | 1 cut(s) | 657 |
| TfiI | GAWTC | 5 cut(s) | 64, 445, 475, 1018, 1037 |
| Tru1I | TTAA | 6 cut(s) | 261, 366, 618, 1557, 1587, 1617 |
| Tru9I | TTAA | 6 cut(s) | 261, 366, 618, 1557, 1587, 1617 |
| TscAI | CASTG | 3 cut(s) | 39, 1006, 1038 |
| TseI | GCWGC | 8 cut(s) | 148, 588, 686, 849, 900, 974, 1172, 1369 |
| TspDTI | ATGAA | 7 cut(s) | 54, 113, 395, 711, 954, 960, 1349 |
| TspGWI | ACGGA | 1 cut(s) | 1139 |
| TspRI | CASTG | 3 cut(s) | 39, 1006, 1038 |
| VpaK11BI | GGWCC | 2 cut(s) | 839, 1154 |
| VspI | ATTAAT | 1 cut(s) | 618 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 861 |
| XapI | RAATTY | 1 cut(s) | 1103 |
| XceI | RCATGY | 1 cut(s) | 812 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 207 |
| XhoI | CTCGAG | 1 cut(s) | 249 |
| XmiI | GTMKAC | 2 cut(s) | 47, 934 |
| XmnI | GAANNNNTTC | 1 cut(s) | 232 |
| XspI | CTAG | 3 cut(s) | 558, 882, 962 |
| Zsp2I | ATGCAT | 1 cut(s) | 421 |