K homology RNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 FvH4_6g45170 |
| malus_domestica | MD09G1087900.v1.1 MD17G1076800.v1.1 MD17G1076900.v1.1 MD17G1077600.v1.1 |
| prunus_persica | Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 Prupe.3G237700_v2.0.a1 |
| pyrus_communis | pycom09g01340 pycom17g07720 |
| rosa_chinensis | RchiOBHm_Chr2g0162761 RchiOBHm_Chr2g0162821 RchiOBHm_Chr2g0162871 |
| rosa_laevigata | RLG00000021358 |
| rosa_multiflora | Rmu_co8424937.1_g000001 Rmu_sc0006129.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00087750 |
| rosa_rugosa | Rorug02G0498900 Rorug02G0498900 Rorug02G0499000 |
| rosa_samantha | Rh2AG564900 Rh2BG577600 Rh2CG547400 Rh2DG587500 |
| rosa_wichuraiana | Rw2G046750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1011 |
| Acc36I | ACCTGC | 1 cut(s) | 66 |
| AccB1I | GGYRCC | 2 cut(s) | 402, 934 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1198 |
| AccII | CGCG | 1 cut(s) | 145 |
| AclWI | GGATC | 2 cut(s) | 714, 1454 |
| AcoI | YGGCCR | 1 cut(s) | 90 |
| AcsI | RAATTY | 4 cut(s) | 201, 769, 1401, 1659 |
| AcuI | CTGAAG | 1 cut(s) | 1605 |
| AfaI | GTAC | 2 cut(s) | 1207, 1614 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 965, 1198, 1563 |
| AgsI | TTSAA | 2 cut(s) | 279, 1594 |
| AjnI | CCWGG | 1 cut(s) | 1649 |
| AleI | CACNNNNGTG | 1 cut(s) | 953 |
| Alw21I | GWGCWC | 1 cut(s) | 1024 |
| Alw26I | GTCTC | 3 cut(s) | 171, 1221, 1685 |
| AlwI | GGATC | 2 cut(s) | 714, 1454 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 58 |
| AoxI | GGCC | 2 cut(s) | 24, 90 |
| ApeKI | GCWGC | 2 cut(s) | 1036, 1745 |
| ApoI | RAATTY | 4 cut(s) | 201, 769, 1401, 1659 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1177 |
| AspLEI | GCGC | 1 cut(s) | 145 |
| AspS9I | GGNCC | 2 cut(s) | 24, 775 |
| AsuC2I | CCSGG | 1 cut(s) | 900 |
| AsuHPI | GGTGA | 5 cut(s) | 149, 601, 638, 679, 980 |
| AvaII | GGWCC | 1 cut(s) | 775 |
| AxyI | CCTNAGG | 1 cut(s) | 347 |
| BaeGI | GKGCMC | 1 cut(s) | 407 |
| BanI | GGYRCC | 2 cut(s) | 402, 934 |
| BanII | GRGCYC | 2 cut(s) | 272, 1024 |
| BauI | CACGAG | 2 cut(s) | 419, 1688 |
| BbsI | GAAGAC | 1 cut(s) | 312 |
| Bbv12I | GWGCWC | 1 cut(s) | 1024 |
| BbvCI | CCTCAGC | 1 cut(s) | 518 |
| BbvI | GCAGC | 2 cut(s) | 1048, 1757 |
| BccI | CCATC | 8 cut(s) | 176, 590, 679, 683, 830, 848, 1084, 1601 |
| BceAI | ACGGC | 1 cut(s) | 1034 |
| BciT130I | CCWGG | 1 cut(s) | 1651 |
| BclI | TGATCA | 1 cut(s) | 1765 |
| BcnI | CCSGG | 1 cut(s) | 900 |
| BcoDI | GTCTC | 3 cut(s) | 171, 1221, 1685 |
| BfaI | CTAG | 3 cut(s) | 369, 383, 1170 |
| BfmI | CTRYAG | 2 cut(s) | 939, 1110 |
| BfuAI | ACCTGC | 1 cut(s) | 66 |
| BglII | AGATCT | 1 cut(s) | 5 |
| BisI | GCNGC | 3 cut(s) | 358, 1037, 1746 |
| BlsI | GCNGC | 3 cut(s) | 359, 1038, 1747 |
| Bme1390I | CCNGG | 2 cut(s) | 900, 1651 |
| Bme18I | GGWCC | 1 cut(s) | 775 |
| BmgT120I | GGNCC | 2 cut(s) | 24, 775 |
| BmiI | GGNNCC | 2 cut(s) | 404, 936 |
| BmrFI | CCNGG | 2 cut(s) | 900, 1651 |
| BmsI | GCATC | 4 cut(s) | 817, 903, 1096, 1111 |
| BpiI | GAAGAC | 1 cut(s) | 312 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 970, 1002 |
| BpmI | CTGGAG | 2 cut(s) | 1672, 1686 |
| Bpu10I | CCTNAGC | 3 cut(s) | 518, 540, 1733 |
| BpuEI | CTTGAG | 1 cut(s) | 1697 |
| BpuMI | CCSGG | 1 cut(s) | 900 |
| Bsa29I | ATCGAT | 1 cut(s) | 564 |
| BsaJI | CCNNGG | 3 cut(s) | 312, 847, 1649 |
| BsaXI | ACNNNNNCTCC | 9 cut(s) | 416, 446, 536, 566, 1136, 1166, 1684, 1714, 1760 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 965, 1198, 1563 |
| Bse118I | RCCGGY | 1 cut(s) | 88 |
| Bse1I | ACTGG | 1 cut(s) | 1055 |
| Bse21I | CCTNAGG | 1 cut(s) | 347 |
| Bse3DI | GCAATG | 4 cut(s) | 297, 537, 622, 933 |
| BseBI | CCWGG | 1 cut(s) | 1651 |
| BseCI | ATCGAT | 1 cut(s) | 564 |
| BseDI | CCNNGG | 3 cut(s) | 312, 847, 1649 |
| BseGI | GGATG | 8 cut(s) | 667, 690, 694, 754, 760, 1126, 1319, 1612 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 965, 1198, 1563 |
| BseMI | GCAATG | 4 cut(s) | 297, 537, 622, 933 |
| BseMII | CTCAG | 5 cut(s) | 248, 509, 693, 1155, 1380 |
| BseNI | ACTGG | 1 cut(s) | 1055 |
| BseRI | GAGGAG | 9 cut(s) | 437, 535, 864, 893, 978, 1130, 1204, 1258, 1486 |
| BseSI | GKGCMC | 1 cut(s) | 407 |
| BseXI | GCAGC | 2 cut(s) | 1048, 1757 |
| BsgI | GTGCAG | 1 cut(s) | 1055 |
| Bsh1236I | CGCG | 1 cut(s) | 145 |
| BshFI | GGCC | 2 cut(s) | 26, 92 |
| BshNI | GGYRCC | 2 cut(s) | 402, 934 |
| BshVI | ATCGAT | 1 cut(s) | 564 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1024 |
| BsiSI | CCGG | 2 cut(s) | 89, 899 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 965, 1198, 1563 |
| BsmAI | GTCTC | 3 cut(s) | 171, 1221, 1685 |
| BsmBI | CGTCTC | 1 cut(s) | 171 |
| BsnI | GGCC | 2 cut(s) | 26, 92 |
| Bsp1286I | GDGCHC | 3 cut(s) | 272, 407, 1024 |
| Bsp143I | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| Bsp19I | CCATGG | 1 cut(s) | 312 |
| BspANI | GGCC | 2 cut(s) | 26, 92 |
| BspCNI | CTCAG | 5 cut(s) | 247, 510, 694, 1156, 1381 |
| BspDI | ATCGAT | 1 cut(s) | 564 |
| BspFNI | CGCG | 1 cut(s) | 145 |
| BspLI | GGNNCC | 2 cut(s) | 404, 936 |
| BspMAI | CTGCAG | 1 cut(s) | 943 |
| BspMI | ACCTGC | 1 cut(s) | 66 |
| BspPI | GGATC | 2 cut(s) | 714, 1454 |
| BspT107I | GGYRCC | 2 cut(s) | 402, 934 |
| BsrDI | GCAATG | 4 cut(s) | 297, 537, 622, 933 |
| BsrFI | RCCGGY | 1 cut(s) | 88 |
| BsrI | ACTGG | 1 cut(s) | 1055 |
| BssAI | RCCGGY | 1 cut(s) | 88 |
| BssECI | CCNNGG | 3 cut(s) | 312, 847, 1649 |
| BssMI | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| BssSI | CACGAG | 2 cut(s) | 419, 1688 |
| BssT1I | CCWWGG | 1 cut(s) | 312 |
| Bst2BI | CACGAG | 2 cut(s) | 419, 1688 |
| Bst2UI | CCWGG | 1 cut(s) | 1651 |
| Bst4CI | ACNGT | 4 cut(s) | 75, 482, 673, 952 |
| Bst6I | CTCTTC | 3 cut(s) | 232, 504, 1581 |
| BstC8I | GCNNGC | 4 cut(s) | 63, 537, 643, 939 |
| BstDEI | CTNAG | 9 cut(s) | 234, 328, 347, 518, 540, 702, 1164, 1389, 1733 |
| BstDSI | CCRYGG | 1 cut(s) | 312 |
| BstF5I | GGATG | 8 cut(s) | 667, 690, 694, 754, 760, 1126, 1319, 1612 |
| BstFNI | CGCG | 1 cut(s) | 145 |
| BstHHI | GCGC | 1 cut(s) | 145 |
| BstKTI | GATC | 5 cut(s) | 8, 129, 709, 1462, 1768 |
| BstMAI | GTCTC | 3 cut(s) | 171, 1221, 1685 |
| BstMBI | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 168, 536, 1003, 1436 |
| BstNI | CCWGG | 1 cut(s) | 1651 |
| BstSCI | CCNGG | 2 cut(s) | 898, 1649 |
| BstSFI | CTRYAG | 2 cut(s) | 939, 1110 |
| BstSLI | GKGCMC | 1 cut(s) | 407 |
| BstUI | CGCG | 1 cut(s) | 145 |
| BstV1I | GCAGC | 2 cut(s) | 1048, 1757 |
| BstV2I | GAAGAC | 1 cut(s) | 312 |
| BstX2I | RGATCY | 2 cut(s) | 5, 1459 |
| BstYI | RGATCY | 2 cut(s) | 5, 1459 |
| Bsu15I | ATCGAT | 1 cut(s) | 564 |
| Bsu36I | CCTNAGG | 1 cut(s) | 347 |
| BsuRI | GGCC | 2 cut(s) | 26, 92 |
| BsuTUI | ATCGAT | 1 cut(s) | 564 |
| BtgI | CCRYGG | 1 cut(s) | 312 |
| BtsCI | GGATG | 8 cut(s) | 667, 690, 694, 754, 760, 1126, 1319, 1612 |
| BtsIMutI | CAGTG | 3 cut(s) | 80, 948, 1500 |
| BveI | ACCTGC | 1 cut(s) | 66 |
| Cac8I | GCNNGC | 4 cut(s) | 63, 537, 643, 939 |
| CaiI | CAGNNNCTG | 1 cut(s) | 58 |
| CfoI | GCGC | 1 cut(s) | 145 |
| Cfr10I | RCCGGY | 1 cut(s) | 88 |
| Cfr13I | GGNCC | 2 cut(s) | 24, 775 |
| ClaI | ATCGAT | 1 cut(s) | 564 |
| CseI | GACGC | 2 cut(s) | 160, 1154 |
| Csp6I | GTAC | 2 cut(s) | 1206, 1613 |
| CviAII | CATG | 3 cut(s) | 44, 313, 556 |
| CviQI | GTAC | 2 cut(s) | 1206, 1613 |
| DdeI | CTNAG | 9 cut(s) | 234, 328, 347, 518, 540, 702, 1164, 1389, 1733 |
| DpnI | GATC | 5 cut(s) | 7, 128, 708, 1461, 1767 |
| DpnII | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| EaeI | YGGCCR | 1 cut(s) | 90 |
| Eam1104I | CTCTTC | 3 cut(s) | 232, 504, 1581 |
| EarI | CTCTTC | 3 cut(s) | 232, 504, 1581 |
| Ecl136II | GAGCTC | 1 cut(s) | 1022 |
| Eco130I | CCWWGG | 1 cut(s) | 312 |
| Eco24I | GRGCYC | 2 cut(s) | 272, 1024 |
| Eco47I | GGWCC | 1 cut(s) | 775 |
| Eco53kI | GAGCTC | 1 cut(s) | 1022 |
| Eco57I | CTGAAG | 1 cut(s) | 1605 |
| Eco81I | CCTNAGG | 1 cut(s) | 347 |
| EcoICRI | GAGCTC | 1 cut(s) | 1022 |
| EcoRII | CCWGG | 1 cut(s) | 1649 |
| EcoT14I | CCWWGG | 1 cut(s) | 312 |
| EcoT38I | GRGCYC | 2 cut(s) | 272, 1024 |
| ErhI | CCWWGG | 1 cut(s) | 312 |
| Esp3I | CGTCTC | 1 cut(s) | 171 |
| FaeI | CATG | 3 cut(s) | 47, 316, 559 |
| FatI | CATG | 3 cut(s) | 43, 312, 555 |
| FauI | CCCGC | 1 cut(s) | 498 |
| FbaI | TGATCA | 1 cut(s) | 1765 |
| Fnu4HI | GCNGC | 3 cut(s) | 358, 1037, 1746 |
| FokI | GGATG | 8 cut(s) | 674, 697, 701, 761, 767, 1133, 1306, 1619 |
| FriOI | GRGCYC | 2 cut(s) | 272, 1024 |
| Fsp4HI | GCNGC | 3 cut(s) | 358, 1037, 1746 |
| FspBI | CTAG | 3 cut(s) | 369, 383, 1170 |
| GlaI | GCGC | 1 cut(s) | 144 |
| GluI | GCNGC | 3 cut(s) | 358, 1037, 1746 |
| GsuI | CTGGAG | 2 cut(s) | 1672, 1686 |
| HaeIII | GGCC | 2 cut(s) | 26, 92 |
| HapII | CCGG | 2 cut(s) | 89, 899 |
| HgaI | GACGC | 2 cut(s) | 160, 1154 |
| HhaI | GCGC | 1 cut(s) | 145 |
| Hin1II | CATG | 3 cut(s) | 47, 316, 559 |
| Hin6I | GCGC | 1 cut(s) | 143 |
| HinP1I | GCGC | 1 cut(s) | 143 |
| HpaII | CCGG | 2 cut(s) | 89, 899 |
| HphI | GGTGA | 5 cut(s) | 149, 601, 638, 679, 980 |
| Hpy166II | GTNNAC | 3 cut(s) | 418, 1578, 1636 |
| Hpy188I | TCNGA | 9 cut(s) | 176, 775, 793, 1165, 1183, 1189, 1254, 1390, 1698 |
| Hpy8I | GTNNAC | 3 cut(s) | 418, 1578, 1636 |
| Hpy99I | CGWCG | 8 cut(s) | 121, 176, 244, 247, 250, 253, 256, 259 |
| HpyAV | CCTTC | 8 cut(s) | 451, 456, 520, 623, 881, 1080, 1196, 1450 |
| HpyCH4III | ACNGT | 4 cut(s) | 75, 482, 673, 952 |
| HpyCH4V | TGCA | 6 cut(s) | 61, 199, 535, 830, 941, 1036 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 168, 536, 1003, 1436 |
| HpyF3I | CTNAG | 9 cut(s) | 234, 328, 347, 518, 540, 702, 1164, 1389, 1733 |
| Hsp92II | CATG | 3 cut(s) | 47, 316, 559 |
| HspAI | GCGC | 1 cut(s) | 143 |
| Ksp22I | TGATCA | 1 cut(s) | 1765 |
| Kzo9I | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| LmnI | GCTCC | 1 cut(s) | 1734 |
| Lsp1109I | GCAGC | 2 cut(s) | 1048, 1757 |
| LweI | GCATC | 4 cut(s) | 817, 903, 1096, 1111 |
| MaeI | CTAG | 3 cut(s) | 369, 383, 1170 |
| MaeIII | GTNAC | 2 cut(s) | 667, 1312 |
| MalI | GATC | 5 cut(s) | 7, 128, 708, 1461, 1767 |
| MboI | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| MflI | RGATCY | 2 cut(s) | 5, 1459 |
| MhlI | GDGCHC | 3 cut(s) | 272, 407, 1024 |
| MmeI | TCCRAC | 2 cut(s) | 154, 771 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1177 |
| MseI | TTAA | 2 cut(s) | 579, 1572 |
| MslI | CAYNNNNRTG | 1 cut(s) | 953 |
| MspA1I | CMGCKG | 1 cut(s) | 1583 |
| MspI | CCGG | 2 cut(s) | 89, 899 |
| MspR9I | CCNGG | 2 cut(s) | 900, 1651 |
| MvaI | CCWGG | 1 cut(s) | 1651 |
| MvnI | CGCG | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 168, 536, 1003, 1436 |
| NciI | CCSGG | 1 cut(s) | 900 |
| NcoI | CCATGG | 1 cut(s) | 312 |
| NdeII | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| NlaIII | CATG | 3 cut(s) | 47, 316, 559 |
| NlaIV | GGNNCC | 2 cut(s) | 404, 936 |
| NmeAIII | GCCGAG | 1 cut(s) | 1150 |
| NmuCI | GTSAC | 1 cut(s) | 667 |
| OliI | CACNNNNGTG | 1 cut(s) | 953 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 248, 251, 254 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1177 |
| PfeI | GAWTC | 5 cut(s) | 547, 962, 1184, 1349, 1523 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1198 |
| PfoI | TCCNGGA | 1 cut(s) | 898 |
| PkrI | GCNGC | 3 cut(s) | 359, 1038, 1747 |
| PsiI | TTATAA | 1 cut(s) | 1011 |
| Psp124BI | GAGCTC | 1 cut(s) | 1024 |
| Psp6I | CCWGG | 1 cut(s) | 1649 |
| PspGI | CCWGG | 1 cut(s) | 1649 |
| PspN4I | GGNNCC | 2 cut(s) | 404, 936 |
| PspPI | GGNCC | 2 cut(s) | 24, 775 |
| PstI | CTGCAG | 1 cut(s) | 943 |
| PstNI | CAGNNNCTG | 1 cut(s) | 58 |
| PsuI | RGATCY | 2 cut(s) | 5, 1459 |
| PvuII | CAGCTG | 1 cut(s) | 1583 |
| RsaI | GTAC | 2 cut(s) | 1207, 1614 |
| RsaNI | GTAC | 2 cut(s) | 1206, 1613 |
| RseI | CAYNNNNRTG | 1 cut(s) | 953 |
| SacI | GAGCTC | 1 cut(s) | 1024 |
| SaqAI | TTAA | 2 cut(s) | 579, 1572 |
| SatI | GCNGC | 3 cut(s) | 358, 1037, 1746 |
| Sau3AI | GATC | 5 cut(s) | 5, 126, 706, 1459, 1765 |
| Sau96I | GGNCC | 2 cut(s) | 24, 775 |
| ScrFI | CCNGG | 2 cut(s) | 900, 1651 |
| SduI | GDGCHC | 3 cut(s) | 272, 407, 1024 |
| SfaNI | GCATC | 4 cut(s) | 817, 903, 1096, 1111 |
| SfcI | CTRYAG | 2 cut(s) | 939, 1110 |
| SinI | GGWCC | 1 cut(s) | 775 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 953 |
| SmlI | CTYRAG | 1 cut(s) | 1712 |
| SmoI | CTYRAG | 1 cut(s) | 1712 |
| SspMI | CTAG | 3 cut(s) | 369, 383, 1170 |
| SstI | GAGCTC | 1 cut(s) | 1024 |
| StyD4I | CCNGG | 2 cut(s) | 898, 1649 |
| StyI | CCWWGG | 1 cut(s) | 312 |
| TaaI | ACNGT | 4 cut(s) | 75, 482, 673, 952 |
| TaqI | TCGA | 3 cut(s) | 564, 1295, 1469 |
| TaqII | GACCGA | 2 cut(s) | 699, 861 |
| TauI | GCSGC | 1 cut(s) | 360 |
| TfiI | GAWTC | 5 cut(s) | 547, 962, 1184, 1349, 1523 |
| Tru1I | TTAA | 2 cut(s) | 579, 1572 |
| Tru9I | TTAA | 2 cut(s) | 579, 1572 |
| TscAI | CASTG | 3 cut(s) | 80, 955, 1507 |
| TseFI | GTSAC | 1 cut(s) | 667 |
| TseI | GCWGC | 2 cut(s) | 1036, 1745 |
| Tsp45I | GTSAC | 1 cut(s) | 667 |
| TspDTI | ATGAA | 7 cut(s) | 5, 60, 139, 315, 834, 900, 1538 |
| TspGWI | ACGGA | 1 cut(s) | 1032 |
| TspRI | CASTG | 3 cut(s) | 80, 955, 1507 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1198 |
| VpaK11BI | GGWCC | 1 cut(s) | 775 |
| XapI | RAATTY | 4 cut(s) | 201, 769, 1401, 1659 |
| XbaI | TCTAGA | 1 cut(s) | 1169 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1177 |
| XspI | CTAG | 3 cut(s) | 369, 383, 1170 |