Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0009004

Physical Location & Seq

Genomic Coordinates Reverse (-)

2321620 .. 2325297

Gene Structure 3678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGTATATGAACACAGCGTCCTGCTCTGCCCCCTCCCTCCTCAGAGCTTCTAGGGCTCGATTTTTCTCGTCCTCCTCCTCGGCCGTCTCCAGAACCTTCGTTTCTTCGCCCATCAGGCCGTCGCACCACCACTTCGCCTCCCTTCGCTTTCTCAGCTCCTCCTCCGCCGCTCGCTCCTTCCCTCGCTGGAGCCACGGCGGTGTCCATTGGCGCTCCCCCTACACGCTTCGCTCTCAGATCAGAGCCGTCGCTCCCGTCATCGAACAGTTCCAGCGCAAGATCGCTTCCATGGCTTCCGAAAATCCTTTCAAGGCAAACTTGACCAGTCTTCCCAAGCCCGGAGGCGGCGAGTTTGGCAAATTCTACAGCCTTCCTTCTCTGAACGACCCAAGGATTGATAAGTTGCCCTACTCTATCAGAATCCTTCTGGAATCTGCTATCCGTAATTGCGATGGCTTCCAAGTCAAGAAGGAGGATGTTGAGAAAATTATTGATTGGGAAAAGAGTGCCCCAAAGCAAGTCGAAATTCCTTTCAAGCCCGCTCGTGTGCTCTTGCAGGACTTTACTGGAGTTCCAGCTGTGGTCGACCTTGCTTGCATGCGTGATGCTATGAACAATCTTGGGAGTGATTCTAAGAAGATCAATCCTTTGGTTCCTGTAGATCTTGTTATTGATCATTCAGTTCAAGTTGACGTTGCAAGATCAGCAAATGCAGTGCAGGCCAATATCGATCTTGAATTCCAGAGAAACAAGGAGAGATTTGCTTTCCTTAAATGGGGTTCGACTGCTTTCCATAATATGCTTGTTGTTCCACCGGGTTCTGGCATTGTTCATCAGGTTAATCTTGAATATCTTGGACGGGTTGTTTTCAACAATGATGGCTTACTCTACCCTGATAGTGTGGTTGGAACTGATTCCCATACAACCATGATTGACGGGTTAGGAGTTGCTGGATGGGGAGTTGGAGGTATTGAAGCTGAAGCTACTATGCTTGGCCAGCCAATGAGCATGGTGTTGCCTGGTGTTGTCGGGTTCAAGTTATCTGGAAAGTTAAACAATGGTGTTACTGCTACTGACTTGGTTTTGACTGTCACGCAAATACTGAGGAAGCATGGAGTTGTTGGAAAATTTGTTGAATTCTATGGGGATGGTATGGGTGAACTATCATTGGCTGACAGGGCCACTATTGCCAATATGTCCCCTGAGTATGGTGCAACTATGGGTTTCTTCCCTGTTGATCATGTTACTTTACAGTATCTCAAATTAACTGGCAGAAATGACGAGACTGTGTCAATGATTGAAAGTTATCTGCGGGCTAATAAATTGTTCGTTGACTATAATGAGCCTCAATCTGAAAGGGTATACTCATCTTACCTAGAATTGAACCTTTCAGAAGTCGAGCCGTGTGTCTCAGGACCCAAGAGACCTCATGACCGTGTGACTTTGAAAGACATGAAATCTGATTGGCATGCTTGTCTTGATAGCAAGGTTGGGTTCAAGGGATTTGCTATACCAAAAGAGGTGCAAAACAAAGTGGTGAAGTTTCAATTCGAGGGACAGCCAGCAGAGCTTAAGCATGGTAGTGTTGTGATTGCTGCAATCACAAGTTGCACAAATACATCAAACCCAAGTGTCATGCTTGGGGCTGCTCTCGTTGCAAAGAAGGCTAGTGAACTTGGTCTACAGGTCAAGCCATGGGTGAAAACAAGTCTTGCCCCAGGTTCTGGAGTAGTTACAAAATATTTACTAAACAGTGGATTGCAAAAGTATTTTGATCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0003674 GO:0003824 GO:0003994 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005829 GO:0006082 GO:0006101 GO:0006102 GO:0006950 GO:0006970 GO:0006979 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0016999 GO:0017076 GO:0017144 GO:0019752 GO:0030312 GO:0030554 GO:0031090 GO:0031667 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0035639 GO:0036094 GO:0042221 GO:0042594 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048856 GO:0050896 GO:0071704 GO:0071944 GO:0072350 GO:0090351 GO:0097159 GO:0097305 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1901700 GO:1990641

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map00720 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Aconitase Aconitase_C

Protein Analysis

594

Amino Acids

64.97

Weight (kDa)

9.03

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aconitase	PF00330	161 - 593	7.2e-140	Aconitase family (aconitate hydratase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009004)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05710
fragaria_vesca	FvH4_6g43190
malus_domestica	MD09G1108800.v1.1 MD17G1096700.v1.1
prunus_persica	Prupe.3G217300_v2.0.a1 Prupe.3G217300_v2.0.a1
pyrus_communis	pycom09g03120 pycom17g09260
rosa_chinensis	RchiOBHm_Chr2g0159291
rosa_laevigata	RLG00000021152
rosa_multiflora	Rmu_sc0004800.1_g000001 Rmu_sc0007806.1_g000010 Rmu_sc0010590.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090620
rosa_rugosa	Rorug02G0475700
rosa_samantha	Rh2AG542100 Rh2BG554700 Rh2CG524800 Rh2DG564400 Rh5AG522200
rosa_wichuraiana	Rw2G044840 Rw5G048460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1724
AccBSI	CCGCTC	2 cut(s)	170, 542
AccI	GTMKAC	3 cut(s)	585, 1362, 1681
AciI	CCGC	6 cut(s)	165, 168, 198, 345, 540, 1312
AcoI	YGGCCR	2 cut(s)	81, 994
AcsI	RAATTY	5 cut(s)	359, 525, 737, 1127, 1136
AcuI	CTGAAG	1 cut(s)	999
AfiI	CCNNNNNNNGG	6 cut(s)	338, 344, 775, 821, 1208, 1724
AflII	CTTAAG	1 cut(s)	1571
AjnI	CCWGG	2 cut(s)	1018, 1717
AleI	CACNNNNGTG	1 cut(s)	198
AloI	GAACNNNNNNTCC	1 cut(s)	34
AluBI	AGCT	6 cut(s)	47, 156, 578, 977, 983, 1570
AluI	AGCT	6 cut(s)	47, 156, 578, 977, 983, 1570
Alw21I	GWGCWC	1 cut(s)	552
Alw26I	GTCTC	4 cut(s)	91, 1277, 1414, 1417
AlwNI	CAGNNNCTG	1 cut(s)	1724
AoxI	GGCC	5 cut(s)	81, 116, 720, 994, 1179
ApeKI	GCWGC	2 cut(s)	1595, 1646
ApoI	RAATTY	5 cut(s)	359, 525, 737, 1127, 1136
Asp700I	GAANNNNTTC	1 cut(s)	913
AspLEI	GCGC	2 cut(s)	213, 276
AspS9I	GGNCC	2 cut(s)	1179, 1415
AsuC2I	CCSGG	2 cut(s)	339, 816
AsuHPI	GGTGA	3 cut(s)	1169, 1549, 1711
AvaII	GGWCC	1 cut(s)	1415
BaeGI	GKGCMC	1 cut(s)	511
BalI	TGGCCA	1 cut(s)	996
BanII	GRGCYC	1 cut(s)	58
BauI	CACGAG	1 cut(s)	543
BbsI	GAAGAC	1 cut(s)	320
Bbv12I	GWGCWC	1 cut(s)	552
BbvI	GCAGC	2 cut(s)	1582, 1633
BccI	CCATC	5 cut(s)	119, 446, 872, 948, 1142
BceAI	ACGGC	5 cut(s)	68, 103, 211, 230, 1387
BciT130I	CCWGG	2 cut(s)	1020, 1719
BclI	TGATCA	3 cut(s)	673, 1237, 1774
BcnI	CCSGG	2 cut(s)	339, 816
BcoDI	GTCTC	4 cut(s)	91, 1277, 1414, 1417
BfaI	CTAG	3 cut(s)	51, 1376, 1668
BfmI	CTRYAG	3 cut(s)	364, 657, 1682
BfoI	RGCGCY	1 cut(s)	214
BfrI	CTTAAG	1 cut(s)	1571
BglI	GCCNNNNNGGC	1 cut(s)	115
BglII	AGATCT	1 cut(s)	661
BisI	GCNGC	4 cut(s)	168, 346, 1596, 1647
BlsI	GCNGC	4 cut(s)	169, 347, 1597, 1648
Bme1390I	CCNGG	4 cut(s)	339, 816, 1020, 1719
Bme18I	GGWCC	1 cut(s)	1415
BmgT120I	GGNCC	2 cut(s)	1179, 1415
BmiI	GGNNCC	3 cut(s)	191, 654, 1417
BmrFI	CCNGG	4 cut(s)	339, 816, 1020, 1719
BmsI	GCATC	1 cut(s)	595
BpiI	GAAGAC	1 cut(s)	320
BpmI	CTGGAG	4 cut(s)	73, 208, 588, 1746
BpuMI	CCSGG	2 cut(s)	339, 816
Bsa29I	ATCGAT	1 cut(s)	729
BsaI	GGTCTC	1 cut(s)	1417
BsaJI	CCNNGG	6 cut(s)	78, 193, 288, 389, 1694, 1717
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	6 cut(s)	338, 344, 775, 821, 1208, 1724
Bse1I	ACTGG	3 cut(s)	324, 571, 1273
BseBI	CCWGG	2 cut(s)	1020, 1719
BseCI	ATCGAT	1 cut(s)	729
BseDI	CCNNGG	6 cut(s)	78, 193, 288, 389, 1694, 1717
BseGI	GGATG	3 cut(s)	481, 959, 1153
BseLI	CCNNNNNNNGG	6 cut(s)	338, 344, 775, 821, 1208, 1724
BseMII	CTCAG	6 cut(s)	55, 166, 248, 1094, 1194, 1425
BseNI	ACTGG	3 cut(s)	324, 571, 1273
BseRI	GAGGAG	5 cut(s)	29, 64, 67, 148, 151
BseSI	GKGCMC	1 cut(s)	511
BseX3I	CGGCCG	1 cut(s)	81
BseXI	GCAGC	2 cut(s)	1582, 1633
BsgI	GTGCAG	1 cut(s)	737
Bsh1285I	CGRYCG	1 cut(s)	84
BshFI	GGCC	5 cut(s)	83, 118, 722, 996, 1181
BshVI	ATCGAT	1 cut(s)	729
BsiEI	CGRYCG	1 cut(s)	84
BsiHKAI	GWGCWC	1 cut(s)	552
BsiSI	CCGG	2 cut(s)	339, 815
BslFI	GGGAC	2 cut(s)	1183, 1569
BslI	CCNNNNNNNGG	6 cut(s)	338, 344, 775, 821, 1208, 1724
BsmAI	GTCTC	4 cut(s)	91, 1277, 1414, 1417
BsmBI	CGTCTC	1 cut(s)	91
BsmFI	GGGAC	2 cut(s)	1183, 1569
BsnI	GGCC	5 cut(s)	83, 118, 722, 996, 1181
Bso31I	GGTCTC	1 cut(s)	1417
Bsp1286I	GDGCHC	3 cut(s)	58, 511, 552
Bsp143I	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
Bsp19I	CCATGG	2 cut(s)	288, 1694
BspACI	CCGC	6 cut(s)	165, 168, 198, 345, 540, 1312
BspANI	GGCC	5 cut(s)	83, 118, 722, 996, 1181
BspCNI	CTCAG	6 cut(s)	54, 165, 247, 1095, 1195, 1424
BspDI	ATCGAT	1 cut(s)	729
BspHI	TCATGA	1 cut(s)	1429
BspLI	GGNNCC	3 cut(s)	191, 654, 1417
BspTI	CTTAAG	1 cut(s)	1571
BspTNI	GGTCTC	1 cut(s)	1417
BsrBI	CCGCTC	2 cut(s)	170, 542
BsrI	ACTGG	3 cut(s)	324, 571, 1273
BssECI	CCNNGG	6 cut(s)	78, 193, 288, 389, 1694, 1717
BssMI	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
BssNAI	GTATAC	1 cut(s)	1363
BssSI	CACGAG	1 cut(s)	543
BssT1I	CCWWGG	3 cut(s)	288, 389, 1694
Bst1107I	GTATAC	1 cut(s)	1363
Bst2BI	CACGAG	1 cut(s)	543
Bst2UI	CCWGG	2 cut(s)	1020, 1719
Bst4CI	ACNGT	6 cut(s)	267, 1090, 1254, 1288, 1436, 1754
BstAFI	CTTAAG	1 cut(s)	1571
BstC8I	GCNNGC	9 cut(s)	172, 540, 595, 599, 720, 998, 1314, 1470, 1563
BstDEI	CTNAG	7 cut(s)	41, 152, 234, 633, 1103, 1203, 1411
BstDSI	CCRYGG	3 cut(s)	193, 288, 1694
BstF5I	GGATG	3 cut(s)	481, 959, 1153
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	213, 276
BstKTI	GATC	9 cut(s)	240, 282, 642, 664, 676, 704, 733, 1240, 1777
BstMAI	GTCTC	4 cut(s)	91, 1277, 1414, 1417
BstMBI	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
BstMCI	CGRYCG	1 cut(s)	84
BstNI	CCWGG	2 cut(s)	1020, 1719
BstNSI	RCATGY	2 cut(s)	601, 1472
BstSCI	CCNGG	4 cut(s)	337, 814, 1018, 1717
BstSFI	CTRYAG	3 cut(s)	364, 657, 1682
BstSLI	GKGCMC	1 cut(s)	511
BstV1I	GCAGC	2 cut(s)	1582, 1633
BstV2I	GAAGAC	1 cut(s)	320
BstX2I	RGATCY	1 cut(s)	661
BstYI	RGATCY	1 cut(s)	661
BstZ17I	GTATAC	1 cut(s)	1363
BstZI	CGGCCG	1 cut(s)	81
Bsu15I	ATCGAT	1 cut(s)	729
BsuRI	GGCC	5 cut(s)	83, 118, 722, 996, 1181
BsuTUI	ATCGAT	1 cut(s)	729
BtgI	CCRYGG	3 cut(s)	193, 288, 1694
BtgZI	GCGATG	1 cut(s)	465
BtsCI	GGATG	3 cut(s)	481, 959, 1153
BtsI	GCAGTG	1 cut(s)	720
BtsIMutI	CAGTG	2 cut(s)	720, 1759
Cac8I	GCNNGC	9 cut(s)	172, 540, 595, 599, 720, 998, 1314, 1470, 1563
CaiI	CAGNNNCTG	1 cut(s)	1724
CciI	TCATGA	1 cut(s)	1429
CfoI	GCGC	2 cut(s)	213, 276
Cfr13I	GGNCC	2 cut(s)	1179, 1415
ClaI	ATCGAT	1 cut(s)	729
CseI	GACGC	1 cut(s)	6
DdeI	CTNAG	7 cut(s)	41, 152, 234, 633, 1103, 1203, 1411
DpnI	GATC	9 cut(s)	239, 281, 641, 663, 675, 703, 732, 1239, 1776
DpnII	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
EaeI	YGGCCR	2 cut(s)	81, 994
EagI	CGGCCG	1 cut(s)	81
EciI	GGCGGA	1 cut(s)	154
EclXI	CGGCCG	1 cut(s)	81
Eco130I	CCWWGG	3 cut(s)	288, 389, 1694
Eco24I	GRGCYC	1 cut(s)	58
Eco31I	GGTCTC	1 cut(s)	1417
Eco47I	GGWCC	1 cut(s)	1415
Eco52I	CGGCCG	1 cut(s)	81
Eco57I	CTGAAG	1 cut(s)	999
EcoO109I	RGGNCCY	1 cut(s)	1415
EcoRI	GAATTC	2 cut(s)	737, 1136
EcoRII	CCWGG	2 cut(s)	1018, 1717
EcoT14I	CCWWGG	3 cut(s)	288, 389, 1694
EcoT38I	GRGCYC	1 cut(s)	58
ErhI	CCWWGG	3 cut(s)	288, 389, 1694
Esp3I	CGTCTC	1 cut(s)	91
FalI	AAGNNNNNCTT	2 cut(s)	302, 334
FaqI	GGGAC	2 cut(s)	1183, 1569
FauI	CCCGC	2 cut(s)	547, 1305
FbaI	TGATCA	3 cut(s)	673, 1237, 1774
FblI	GTMKAC	3 cut(s)	585, 1362, 1681
Fnu4HI	GCNGC	4 cut(s)	168, 346, 1596, 1647
FokI	GGATG	3 cut(s)	488, 966, 1160
FriOI	GRGCYC	1 cut(s)	58
Fsp4HI	GCNGC	4 cut(s)	168, 346, 1596, 1647
FspBI	CTAG	3 cut(s)	51, 1376, 1668
GlaI	GCGC	2 cut(s)	212, 275
GluI	GCNGC	4 cut(s)	168, 346, 1596, 1647
GsuI	CTGGAG	4 cut(s)	73, 208, 588, 1746
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	5 cut(s)	83, 118, 722, 996, 1181
HapII	CCGG	2 cut(s)	339, 815
HgaI	GACGC	1 cut(s)	6
HhaI	GCGC	2 cut(s)	213, 276
Hin6I	GCGC	2 cut(s)	211, 274
HinP1I	GCGC	2 cut(s)	211, 274
HincII	GTYRAC	3 cut(s)	586, 691, 1333
HindII	GTYRAC	3 cut(s)	586, 691, 1333
HinfI	GANTC	4 cut(s)	420, 431, 629, 914
HpaII	CCGG	2 cut(s)	339, 815
HphI	GGTGA	3 cut(s)	1169, 1549, 1711
Hpy166II	GTNNAC	7 cut(s)	586, 691, 1160, 1333, 1363, 1673, 1682
Hpy188I	TCNGA	9 cut(s)	44, 237, 242, 298, 381, 419, 1354, 1393, 1462
Hpy8I	GTNNAC	7 cut(s)	586, 691, 1160, 1333, 1363, 1673, 1682
Hpy99I	CGWCG	2 cut(s)	124, 251
HpyAV	CCTTC	8 cut(s)	106, 152, 187, 380, 384, 434, 463, 1657
HpyCH4III	ACNGT	6 cut(s)	267, 1090, 1254, 1288, 1436, 1754
HpyCH4IV	ACGT	1 cut(s)	693
HpyF3I	CTNAG	7 cut(s)	41, 152, 234, 633, 1103, 1203, 1411
HpySE526I	ACGT	1 cut(s)	693
HspAI	GCGC	2 cut(s)	211, 274
Ksp22I	TGATCA	3 cut(s)	673, 1237, 1774
Kzo9I	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
LmnI	GCTCC	5 cut(s)	161, 179, 189, 218, 256
Lsp1109I	GCAGC	2 cut(s)	1582, 1633
LweI	GCATC	1 cut(s)	595
MaeI	CTAG	3 cut(s)	51, 1376, 1668
MaeII	ACGT	1 cut(s)	693
MaeIII	GTNAC	5 cut(s)	1063, 1090, 1243, 1438, 1732
MalI	GATC	9 cut(s)	239, 281, 641, 663, 675, 703, 732, 1239, 1776
MbiI	CCGCTC	2 cut(s)	170, 542
MboI	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
MboII	GAAGA	4 cut(s)	96, 320, 649, 1219
MflI	RGATCY	1 cut(s)	661
MhlI	GDGCHC	3 cut(s)	58, 511, 552
MlsI	TGGCCA	1 cut(s)	996
MluNI	TGGCCA	1 cut(s)	996
MmeI	TCCRAC	3 cut(s)	886, 943, 1102
Mox20I	TGGCCA	1 cut(s)	996
MroXI	GAANNNNTTC	1 cut(s)	913
MscI	TGGCCA	1 cut(s)	996
MseI	TTAA	5 cut(s)	771, 840, 1052, 1265, 1572
MslI	CAYNNNNRTG	3 cut(s)	198, 1434, 1581
Msp20I	TGGCCA	1 cut(s)	996
MspA1I	CMGCKG	1 cut(s)	578
MspCI	CTTAAG	1 cut(s)	1571
MspI	CCGG	2 cut(s)	339, 815
MspR9I	CCNGG	4 cut(s)	339, 816, 1020, 1719
MvaI	CCWGG	2 cut(s)	1020, 1719
NciI	CCSGG	2 cut(s)	339, 816
NcoI	CCATGG	2 cut(s)	288, 1694
NdeII	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
NlaIV	GGNNCC	3 cut(s)	191, 654, 1417
NmeAIII	GCCGAG	1 cut(s)	59
NmuCI	GTSAC	2 cut(s)	1090, 1438
NspI	RCATGY	2 cut(s)	601, 1472
OliI	CACNNNNGTG	1 cut(s)	198
PaeI	GCATGC	2 cut(s)	601, 1472
PagI	TCATGA	1 cut(s)	1429
PdmI	GAANNNNTTC	1 cut(s)	913
PfeI	GAWTC	4 cut(s)	420, 431, 629, 914
PflFI	GACNNNGTC	1 cut(s)	1288
PflMI	CCANNNNNTGG	1 cut(s)	1724
PkrI	GCNGC	4 cut(s)	169, 347, 1597, 1648
PpuMI	RGGWCCY	1 cut(s)	1415
Psp5II	RGGWCCY	1 cut(s)	1415
Psp6I	CCWGG	2 cut(s)	1018, 1717
PspGI	CCWGG	2 cut(s)	1018, 1717
PspN4I	GGNNCC	3 cut(s)	191, 654, 1417
PspPI	GGNCC	2 cut(s)	1179, 1415
PspPPI	RGGWCCY	1 cut(s)	1415
PsrI	GAACNNNNNNTAC	2 cut(s)	1665, 1697
PstNI	CAGNNNCTG	1 cut(s)	1724
PsuI	RGATCY	1 cut(s)	661
PsyI	GACNNNGTC	1 cut(s)	1288
PvuII	CAGCTG	1 cut(s)	578
RseI	CAYNNNNRTG	3 cut(s)	198, 1434, 1581
SalI	GTCGAC	1 cut(s)	584
SaqAI	TTAA	5 cut(s)	771, 840, 1052, 1265, 1572
SatI	GCNGC	4 cut(s)	168, 346, 1596, 1647
Sau3AI	GATC	9 cut(s)	237, 279, 639, 661, 673, 701, 730, 1237, 1774
Sau96I	GGNCC	2 cut(s)	1179, 1415
ScrFI	CCNGG	4 cut(s)	339, 816, 1020, 1719
SduI	GDGCHC	3 cut(s)	58, 511, 552
SfaNI	GCATC	1 cut(s)	595
SfcI	CTRYAG	3 cut(s)	364, 657, 1682
SinI	GGWCC	1 cut(s)	1415
SmiMI	CAYNNNNRTG	3 cut(s)	198, 1434, 1581
SmlI	CTYRAG	1 cut(s)	1571
SmoI	CTYRAG	1 cut(s)	1571
SphI	GCATGC	2 cut(s)	601, 1472
SsiI	CCGC	6 cut(s)	165, 168, 198, 345, 540, 1312
SspI	AATATT	1 cut(s)	1742
SspMI	CTAG	3 cut(s)	51, 1376, 1668
StyD4I	CCNGG	4 cut(s)	337, 814, 1018, 1717
StyI	CCWWGG	3 cut(s)	288, 389, 1694
TaaI	ACNGT	6 cut(s)	267, 1090, 1254, 1288, 1436, 1754
TaiI	ACGT	1 cut(s)	696
TaqI	TCGA	8 cut(s)	58, 261, 522, 585, 729, 782, 1398, 1551
TauI	GCSGC	2 cut(s)	170, 348
TfiI	GAWTC	4 cut(s)	420, 431, 629, 914
Tru1I	TTAA	5 cut(s)	771, 840, 1052, 1265, 1572
Tru9I	TTAA	5 cut(s)	771, 840, 1052, 1265, 1572
TscAI	CASTG	2 cut(s)	720, 1759
TseFI	GTSAC	2 cut(s)	1090, 1438
TseI	GCWGC	2 cut(s)	1595, 1646
Tsp45I	GTSAC	2 cut(s)	1090, 1438
TspDTI	ATGAA	4 cut(s)	23, 626, 821, 1469
TspGWI	ACGGA	1 cut(s)	431
TspRI	CASTG	2 cut(s)	720, 1759
Tth111I	GACNNNGTC	1 cut(s)	1288
Van91I	CCANNNNNTGG	1 cut(s)	1724
Vha464I	CTTAAG	1 cut(s)	1571
VpaK11BI	GGWCC	1 cut(s)	1415
XapI	RAATTY	5 cut(s)	359, 525, 737, 1127, 1136
XceI	RCATGY	2 cut(s)	601, 1472
XmiI	GTMKAC	3 cut(s)	585, 1362, 1681
XmnI	GAANNNNTTC	1 cut(s)	913
XspI	CTAG	3 cut(s)	51, 1376, 1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.