pycom09g14810

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
14598630 .. 14598914
285 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g14810.1

Sequence Viewer

Length: 285 bp
ATGGTTCATGACACCATTTTGTCTTCTCCTGTTCGGAAGTCAGCATCATTTAGAAAGCAATTCTCACAAAATGAGTTGGGCAGCTGGTCGACGCTCTTTCAGAGACACCGCTTCCTCTTAACAGCCCTAGCACTCCTGACATTCCTCTGCACCATTTACCTTTACTTTGCTGTCACATTAGGAGGCAGTCCGTCATGTTCTGGGTTGAGCGGAACTCAAAAAGCGTTGTGTAGCTTGGAGCATGCAAAGACTTCAGTTGCCCATGGAAAATTGAAAATTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

95

Amino Acids

10.32

Weight (kDa)

9.86

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 210
AccI GTMKAC 1 cut(s) 89
AciI CCGC 2 cut(s) 109, 210
AcsI RAATTY 1 cut(s) 276
AcuI CTGAAG 1 cut(s) 237
AgsI TTSAA 1 cut(s) 274
AluBI AGCT 2 cut(s) 84, 234
AluI AGCT 2 cut(s) 84, 234
Alw26I GTCTC 1 cut(s) 97
ApeKI GCWGC 1 cut(s) 81
ApoI RAATTY 1 cut(s) 276
BbsI GAAGAC 1 cut(s) 15
BbvI GCAGC 1 cut(s) 93
BcoDI GTCTC 1 cut(s) 97
BfaI CTAG 1 cut(s) 128
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
BmsI GCATC 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 15
BplI GAGNNNNNCTC 2 cut(s) 199, 231
BsaJI CCNNGG 1 cut(s) 262
BseDI CCNNGG 1 cut(s) 262
BseXI GCAGC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 133
BsmAI GTCTC 1 cut(s) 97
Bsp19I CCATGG 1 cut(s) 262
BspACI CCGC 2 cut(s) 109, 210
BspHI TCATGA 1 cut(s) 7
BsrBI CCGCTC 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 262
BssT1I CCWWGG 1 cut(s) 262
BstC8I GCNNGC 1 cut(s) 243
BstDSI CCRYGG 1 cut(s) 262
BstMAI GTCTC 1 cut(s) 97
BstNSI RCATGY 1 cut(s) 245
BstV1I GCAGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 15
BtgI CCRYGG 1 cut(s) 262
Cac8I GCNNGC 1 cut(s) 243
CciI TCATGA 1 cut(s) 7
CseI GACGC 1 cut(s) 100
CviAII CATG 4 cut(s) 8, 195, 242, 263
CviJI RGCY 3 cut(s) 84, 125, 234
CviKI_1 RGCY 3 cut(s) 84, 125, 234
Eco130I CCWWGG 1 cut(s) 262
Eco57I CTGAAG 1 cut(s) 237
EcoT14I CCWWGG 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 262
FaeI CATG 4 cut(s) 11, 198, 245, 266
FaiI YATR 4 cut(s) 9, 196, 243, 264
FatI CATG 4 cut(s) 7, 194, 241, 262
FblI GTMKAC 1 cut(s) 89
Fnu4HI GCNGC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 1 cut(s) 128
GluI GCNGC 1 cut(s) 82
HgaI GACGC 1 cut(s) 100
Hin1II CATG 4 cut(s) 11, 198, 245, 266
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
Hpy166II GTNNAC 1 cut(s) 90
Hpy188I TCNGA 2 cut(s) 36, 102
Hpy188III TCNNGA 2 cut(s) 8, 136
Hpy8I GTNNAC 1 cut(s) 90
Hpy99I CGWCG 1 cut(s) 94
HpyCH4V TGCA 2 cut(s) 150, 245
Hsp92II CATG 4 cut(s) 11, 198, 245, 266
LmnI GCTCC 1 cut(s) 238
LpnPI CCDG 4 cut(s) 42, 70, 149, 186
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 1 cut(s) 53
MaeI CTAG 1 cut(s) 128
MaeIII GTNAC 1 cut(s) 172
MbiI CCGCTC 1 cut(s) 210
MboII GAAGA 1 cut(s) 15
MluCI AATT 3 cut(s) 59, 269, 276
MnlI CCTC 3 cut(s) 125, 155, 176
MseI TTAA 1 cut(s) 119
MspA1I CMGCKG 1 cut(s) 84
NcoI CCATGG 1 cut(s) 262
NlaIII CATG 4 cut(s) 11, 198, 245, 266
NmuCI GTSAC 1 cut(s) 172
NspI RCATGY 1 cut(s) 245
PaeI GCATGC 1 cut(s) 245
PagI TCATGA 1 cut(s) 7
PkrI GCNGC 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 84
SalI GTCGAC 1 cut(s) 88
SaqAI TTAA 1 cut(s) 119
SatI GCNGC 1 cut(s) 82
SetI ASST 3 cut(s) 86, 162, 236
SfaNI GCATC 1 cut(s) 53
SphI GCATGC 1 cut(s) 245
Sse9I AATT 3 cut(s) 59, 269, 276
SsiI CCGC 2 cut(s) 109, 210
SspMI CTAG 1 cut(s) 128
StyI CCWWGG 1 cut(s) 262
TaqI TCGA 1 cut(s) 89
TasI AATT 3 cut(s) 59, 269, 276
Tru1I TTAA 1 cut(s) 119
Tru9I TTAA 1 cut(s) 119
TseFI GTSAC 1 cut(s) 172
TseI GCWGC 1 cut(s) 81
Tsp45I GTSAC 1 cut(s) 172
TspGWI ACGGA 1 cut(s) 180
XapI RAATTY 1 cut(s) 276
XceI RCATGY 1 cut(s) 245
XmiI GTMKAC 1 cut(s) 89
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.