pycom10g00200

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
295270 .. 297029
1760 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g00200.4

Sequence Viewer

Length: 306 bp
ATGGGCAACCAGGGCAATGATGCAAGGAAGAACCTAATGAACATGTTGGACTCTGCTAAAGCCAAGCTTGATGAGATTTTACAAATGAAATTTGAACTTGTTATCGAGAACTGCAAGACGAAGCAGGCTATTGAGCAAGTAAATTTGAGGGAAAATGATTTTACGCCAGAGCTAAGGGCAATGGACATAAAGAGGCTGGAAGAAGAATTCAACGCTCTTCTATCAGATAAAGCTGGAGAAACTGAGTACTTAGAAGACTCTGCAGGACCAAATTGTGAAACTGAAGGGAATATCTCATGTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

11.37

Weight (kDa)

4.46

Isoelectric Point (pI)

53.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 89, 142, 206
AcuI CTGAAG 1 cut(s) 303
AfaI GTAC 1 cut(s) 248
AflIII ACRYGT 1 cut(s) 42
AgsI TTSAA 2 cut(s) 95, 211
AjnI CCWGG 1 cut(s) 9
AluBI AGCT 3 cut(s) 67, 172, 233
AluI AGCT 3 cut(s) 67, 172, 233
ApoI RAATTY 3 cut(s) 89, 142, 206
AspS9I GGNCC 1 cut(s) 266
AvaII GGWCC 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 261
BciT130I CCWGG 1 cut(s) 11
BfmI CTRYAG 1 cut(s) 261
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 1 cut(s) 11
Bme18I GGWCC 1 cut(s) 266
BmgT120I GGNCC 1 cut(s) 266
BmrFI CCNGG 1 cut(s) 11
BmsI GCATC 1 cut(s) 10
BpiI GAAGAC 1 cut(s) 261
BpmI CTGGAG 1 cut(s) 255
Bpu10I CCTNAGC 1 cut(s) 173
BsaJI CCNNGG 1 cut(s) 10
Bse3DI GCAATG 2 cut(s) 22, 186
BseBI CCWGG 1 cut(s) 11
BseDI CCNNGG 1 cut(s) 10
BseMI GCAATG 2 cut(s) 22, 186
BseMII CTCAG 1 cut(s) 234
BspCNI CTCAG 1 cut(s) 235
BspMAI CTGCAG 1 cut(s) 265
BspQI GCTCTTC 1 cut(s) 222
BsrDI GCAATG 2 cut(s) 22, 186
BssECI CCNNGG 1 cut(s) 10
Bst2UI CCWGG 1 cut(s) 11
Bst6I CTCTTC 1 cut(s) 222
BstC8I GCNNGC 1 cut(s) 126
BstDEI CTNAG 3 cut(s) 173, 243, 250
BstMWI GCNNNNNNNGC 1 cut(s) 12
BstNI CCWGG 1 cut(s) 11
BstNSI RCATGY 1 cut(s) 46
BstSCI CCNGG 1 cut(s) 9
BstSFI CTRYAG 1 cut(s) 261
BstV2I GAAGAC 1 cut(s) 261
Cac8I GCNNGC 1 cut(s) 126
Cfr13I GGNCC 1 cut(s) 266
Csp6I GTAC 1 cut(s) 247
CviAII CATG 2 cut(s) 43, 297
CviJI RGCY 6 cut(s) 62, 67, 128, 172, 196, 233
CviKI_1 RGCY 6 cut(s) 62, 67, 128, 172, 196, 233
CviQI GTAC 1 cut(s) 247
DdeI CTNAG 3 cut(s) 173, 243, 250
Eam1104I CTCTTC 1 cut(s) 222
EarI CTCTTC 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 266
Eco57I CTGAAG 1 cut(s) 303
EcoRI GAATTC 1 cut(s) 206
EcoRII CCWGG 1 cut(s) 9
FaeI CATG 2 cut(s) 46, 300
FaiI YATR 3 cut(s) 44, 188, 298
FalI AAGNNNNNCTT 2 cut(s) 51, 83
FatI CATG 2 cut(s) 42, 296
GsuI CTGGAG 1 cut(s) 255
Hin1II CATG 2 cut(s) 46, 300
HindIII AAGCTT 1 cut(s) 65
HinfI GANTC 2 cut(s) 50, 257
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 106
HpyAV CCTTC 1 cut(s) 278
HpyCH4V TGCA 3 cut(s) 23, 114, 263
HpyF10VI GCNNNNNNNGC 1 cut(s) 12
HpyF3I CTNAG 3 cut(s) 173, 243, 250
Hsp92II CATG 2 cut(s) 46, 300
LguI GCTCTTC 1 cut(s) 222
LpnPI CCDG 6 cut(s) 23, 110, 180, 182, 219, 249
LweI GCATC 1 cut(s) 10
MboII GAAGA 5 cut(s) 40, 209, 212, 215, 266
MluCI AATT 4 cut(s) 89, 142, 206, 271
MlyI GAGTC 2 cut(s) 44, 251
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 2 cut(s) 141, 186
MspR9I CCNGG 1 cut(s) 11
MvaI CCWGG 1 cut(s) 11
MwoI GCNNNNNNNGC 1 cut(s) 12
NlaIII CATG 2 cut(s) 46, 300
NspI RCATGY 1 cut(s) 46
PciI ACATGT 1 cut(s) 42
PciSI GCTCTTC 1 cut(s) 222
PleI GAGTC 2 cut(s) 44, 251
PpsI GAGTC 2 cut(s) 44, 251
PscI ACATGT 1 cut(s) 42
Psp6I CCWGG 1 cut(s) 9
PspGI CCWGG 1 cut(s) 9
PspPI GGNCC 1 cut(s) 266
PstI CTGCAG 1 cut(s) 265
RsaI GTAC 1 cut(s) 248
RsaNI GTAC 1 cut(s) 247
SapI GCTCTTC 1 cut(s) 222
Sau96I GGNCC 1 cut(s) 266
ScaI AGTACT 1 cut(s) 248
SchI GAGTC 2 cut(s) 44, 251
ScrFI CCNGG 1 cut(s) 11
SetI ASST 4 cut(s) 36, 69, 174, 235
SfaNI GCATC 1 cut(s) 10
SfcI CTRYAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 266
Sse9I AATT 4 cut(s) 89, 142, 206, 271
StyD4I CCNGG 1 cut(s) 9
TaqI TCGA 1 cut(s) 105
TasI AATT 4 cut(s) 89, 142, 206, 271
TatI WGTACW 1 cut(s) 246
TspDTI ATGAA 2 cut(s) 53, 101
VpaK11BI GGWCC 1 cut(s) 266
XapI RAATTY 3 cut(s) 89, 142, 206
XceI RCATGY 1 cut(s) 46
ZrmI AGTACT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.