Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0007335

Physical Location & Seq

Genomic Coordinates Forward (+)

22621053 .. 22623156

Gene Structure 2104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGTTTCTCTGCGAATTCTGAGAACCCATGAACTCCAACAGCAACAGAAGCTATTATCCCCTGCTCCAACACCCAGTTATCTATTCTGCACCCTCTTCTCTCTCAGAGCACTCTCTTCCTACACTCACTATGACGCCCCAAACTCCACCGCCGTCGCTACCGCCATCGCTTCTTCCCAATCGCAGTCACTGGTCAGTTCAGTCTGCTCATTGGTATTCCATTCGTATTCCCCACAAACCCATCTGAGATCTTCACCACCCAAGCTCAATCTCGACTTAAATTCTGAATCTTTGACCCACGAGCAGGCCATTTCCGTCGTCGCTTCGCTGGCTGAGGAGGCAGGTTCCATGGTGGCGCTGAGTTTCTTTTACTGGGCAATTGGGTTTCCCAAGTTTCGATATTTCATGCGGCTGCTTTACATATTCTGCGCAATGTCGATACTTGACAATGGGAATTTGGAGAGAGCCCATGAAGTGGTCCATTGTATGGTGATGAAATTCGCTGAGATTGAGAGGTTGAAGGAGGCTGCTGATATGGTGTTTGAGATGCAGAATCCGGGTCTTGCGTTGAGCACTCGGACGTTGAATTGCGTTCTCGGGATTGCCTGTGATCTGGGTTTGGGTGAGTATGCAGAGAATCTGTTCGAGGAAATGTGTGAGAGAGGTGTGTCTCCTGATTCCTTGAGCTATAAGTCTATGGTTGTTGGGTTTTGTAGGAGCGGGAGGGTTTCGGAGGCGGATAGGTGGTTCAGTAAGATGCTCGAGAGAGGTTCTGTATTGGATAATTCATCGTTTACTTTGATCATAAACATGTTTTACGAGAAGGGTCTTAGCGATAATCACAAGCCAAATGTGCATACGAATACTGCTATGATCAGTGGATATTGCCGCGAGGACAAAATGAGCTTTGCAGAGATGTTGTTGAGCAGGATGAAAGAACAAGGATTAGTTCCTAACACCAATACGTATACTACTCTCATTTCGGGGAATTGTAGAGCTGGGAACTTTGAAAGAGCATATGAGCTCATGGATATAATGGCTAAAGAAGGATTCCCTCCTAATATCTGTACATACAGTGCAGTAATTGACAGTCTCTGTAAAAAGGGGAGGGTTCAAGAAGCAAATCAACTGATTAGGAGAGGCTTTCGACGAGGATTGGCAGCTGATGGGATCACGTATACCATTTTCATATCCGAGCACTGCAAACGGGCTGATATTAATAGGGCCCTGGTGTTTTTTACTAAGATGGTGAAGGTTGGATTGCAGTCGGACATACATTTGTATACAACTTTGATTGCGGCCTTCTGCAGGCAAAAGAAAATGAAAGAAAGTGAGAAACTTTTTGAGTTTGCTGTGAGGGCTGGCTTGATTCCCACCAAGGAAACCTATACGTCCATGATTTGTGGCCATTGTCGGGATGGAAACATTGCTTCAGCTGTTACGTATTTCCAAAGGATGGGCGACCATGGTTGTGCACGGGATAGTATTACTTACGGTGCTCTGATGAGCGGGCCTTGCAATGATGAGAAATTGGAAGAGGCTCGTAGGTTATATGATACCATGATGGACAAAGGGCTGTCGCCTTGTGAAGTCTGTAGGTTGACATTAGCGTACAAGTACTGCATGAAAGATGACTCTGCCGCTGCCATGGTTATGTTGGAAAGGCTAGAAAAGAAGCTCTGGATCCGCACAGTGAATACATTGGTCAGGAAGCTTTGTAGTGAGAAGAAAGTAGGGATAGCAGCATTGTTCTTTCATAAATTAGTGGACAAGGACCAGAACGTGGATCGCGTGACATTGGCAGCATTTATGACCGCATGCTATGAGAGCAACAAGTATGCTCTTGTTTCGGATTTGACTGGGAGGATCACTAAAGGAATTGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

629

Amino Acids

70.51

Weight (kDa)

8.4

Isoelectric Point (pI)

41.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	192 - 239	4.9e-09	PPR repeat family
PPR_1	PF12854	221 - 253	8.1e-06	PPR repeat
PPR	PF01535	229 - 257	4.3e-06	PPR repeat
PPR_2	PF13041	283 - 332	1.2e-13	PPR repeat family
PPR_3	PF13812	314 - 363	9.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	315 - 346	1.5e-10	PPR repeat
PPR_2	PF13041	322 - 367	2.1e-13	PPR repeat family
PPR	PF01535	322 - 351	1.7e-06	PPR repeat
PPR_1	PF12854	350 - 379	1.2e-08	PPR repeat
PPR_2	PF13041	353 - 402	4.7e-10	PPR repeat family
PPR_2	PF13041	424 - 472	1.6e-10	PPR repeat family
PPR_1	PF12854	455 - 486	2.7e-06	PPR repeat
PPR_2	PF13041	461 - 507	5.2e-09	PPR repeat family
PPR	PF01535	462 - 491	6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19890
fragaria_vesca	FvH4_3g12270 FvH4_3g12270 FvH4_3g12270
malus_domestica	MD05G1251800.v1.1
prunus_persica	Prupe.4G111800_v2.0.a1
pyrus_communis	pycom05g22980 pycom10g19560
rosa_chinensis	RchiOBHm_Chr5g0020081 RchiOBHm_Chr7g0211421
rosa_laevigata	RLG00000032497
rosa_multiflora	Rmu_sc0021557.1_g000003
rosa_roxburghii	Rroxscaffold_1G00058120
rosa_rugosa	Rorug05G0056700
rosa_samantha	Rh5AG146800 Rh5BG146300 Rh5CG157900 Rh5DG145800 Rh6CG070300 Rh6DG067500 Rh7AG292200 Rh7CG312200 Rh7DG257000 Rh7DG263700
rosa_wichuraiana	Rw5G012970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	430
Acc36I	ACCTGC	1 cut(s)	332
AccB7I	CCANNNNNTGG	4 cut(s)	475, 487, 1456, 1783
AccBSI	CCGCTC	2 cut(s)	720, 1509
AccI	GTMKAC	3 cut(s)	968, 1178, 1283
AccII	CGCG	2 cut(s)	891, 1791
AclWI	GGATC	5 cut(s)	1178, 1678, 1691, 1794, 1874
AcoI	YGGCCR	1 cut(s)	1405
AcsI	RAATTY	4 cut(s)	15, 280, 454, 497
AcuI	CTGAAG	1 cut(s)	1416
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	3 cut(s)	1069, 1613, 1619
AfiI	CCNNNNNNNGG	7 cut(s)	304, 475, 487, 1308, 1414, 1456, 1783
AflIII	ACRYGT	1 cut(s)	810
AgsI	TTSAA	4 cut(s)	520, 586, 1010, 1115
AjnI	CCWGG	1 cut(s)	1227
AloI	GAACNNNNNNTCC	2 cut(s)	731, 763
Alw21I	GWGCWC	6 cut(s)	112, 575, 1026, 1200, 1477, 1501
Alw26I	GTCTC	2 cut(s)	675, 1097
Alw44I	GTGCAC	1 cut(s)	1473
AlwI	GGATC	5 cut(s)	1178, 1678, 1691, 1794, 1874
AlwNI	CAGNNNCTG	2 cut(s)	190, 1095
Ama87I	CYCGRG	2 cut(s)	596, 761
AoxI	GGCC	5 cut(s)	306, 1224, 1299, 1405, 1511
ApaI	GGGCCC	1 cut(s)	1228
ApaLI	GTGCAC	1 cut(s)	1473
ApeKI	GCWGC	6 cut(s)	412, 527, 1160, 1643, 1742, 1802
ApoI	RAATTY	4 cut(s)	15, 280, 454, 497
AseI	ATTAAT	1 cut(s)	1218
Asp700I	GAANNNNTTC	1 cut(s)	641
AspLEI	GCGC	2 cut(s)	358, 431
AspS9I	GGNCC	5 cut(s)	478, 1224, 1225, 1511, 1774
AsuC2I	CCSGG	1 cut(s)	558
AsuHPI	GGTGA	4 cut(s)	246, 502, 635, 1261
AvaI	CYCGRG	2 cut(s)	596, 761
AvaII	GGWCC	2 cut(s)	478, 1774
BaeGI	GKGCMC	2 cut(s)	1228, 1477
BalI	TGGCCA	1 cut(s)	1407
BamHI	GGATCC	1 cut(s)	1683
BanII	GRGCYC	3 cut(s)	469, 1026, 1228
BauI	CACGAG	1 cut(s)	299
Bbv12I	GWGCWC	6 cut(s)	112, 575, 1026, 1200, 1477, 1501
BbvCI	CCTCAGC	1 cut(s)	333
BbvI	GCAGC	6 cut(s)	399, 514, 1172, 1630, 1754, 1814
BccI	CCATC	7 cut(s)	173, 249, 1160, 1240, 1412, 1450, 1558
BceAI	ACGGC	1 cut(s)	137
BciT130I	CCWGG	1 cut(s)	1229
BclI	TGATCA	2 cut(s)	801, 873
BcnI	CCSGG	1 cut(s)	558
BcoDI	GTCTC	2 cut(s)	675, 1097
BfaI	CTAG	1 cut(s)	1667
BfmI	CTRYAG	2 cut(s)	1306, 1594
BfoI	RGCGCY	1 cut(s)	359
BfuAI	ACCTGC	1 cut(s)	332
BglII	AGATCT	1 cut(s)	248
BmcAI	AGTACT	1 cut(s)	1619
Bme1390I	CCNGG	2 cut(s)	558, 1229
Bme18I	GGWCC	2 cut(s)	478, 1774
BmeT110I	CYCGRG	2 cut(s)	596, 761
BmgT120I	GGNCC	5 cut(s)	478, 1224, 1225, 1511, 1774
BmiI	GGNNCC	3 cut(s)	346, 1226, 1685
BmrFI	CCNGG	2 cut(s)	558, 1229
BmrI	ACTGGG	3 cut(s)	69, 382, 1869
BmsI	GCATC	2 cut(s)	537, 747
BmuI	ACTGGG	3 cut(s)	69, 382, 1869
Bpu10I	CCTNAGC	1 cut(s)	333
BpuEI	CTTGAG	1 cut(s)	703
BpuMI	CCSGG	1 cut(s)	558
BsaAI	YACGTR	3 cut(s)	966, 1176, 1443
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	5 cut(s)	348, 1227, 1377, 1465, 1647
Bsc4I	CCNNNNNNNGG	7 cut(s)	304, 475, 487, 1308, 1414, 1456, 1783
Bse1I	ACTGG	4 cut(s)	75, 195, 377, 1864
Bse3DI	GCAATG	3 cut(s)	438, 1425, 1525
BseBI	CCWGG	1 cut(s)	1229
BseDI	CCNNGG	5 cut(s)	348, 1227, 1377, 1465, 1647
BseGI	GGATG	3 cut(s)	936, 1423, 1461
BseLI	CCNNNNNNNGG	7 cut(s)	304, 475, 487, 1308, 1414, 1456, 1783
BseMI	GCAATG	3 cut(s)	438, 1425, 1525
BseMII	CTCAG	6 cut(s)	11, 118, 236, 324, 350, 495
BseNI	ACTGG	4 cut(s)	75, 195, 377, 1864
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	2 cut(s)	1228, 1477
BseXI	GCAGC	6 cut(s)	399, 514, 1172, 1630, 1754, 1814
BseYI	CCCAGC	1 cut(s)	998
BsgI	GTGCAG	2 cut(s)	73, 1098
Bsh1236I	CGCG	2 cut(s)	891, 1791
BshFI	GGCC	5 cut(s)	308, 1226, 1301, 1407, 1513
BsiHKAI	GWGCWC	6 cut(s)	112, 575, 1026, 1200, 1477, 1501
BsiHKCI	CYCGRG	2 cut(s)	596, 761
BsiSI	CCGG	1 cut(s)	557
BslI	CCNNNNNNNGG	7 cut(s)	304, 475, 487, 1308, 1414, 1456, 1783
BsmAI	GTCTC	2 cut(s)	675, 1097
BsnI	GGCC	5 cut(s)	308, 1226, 1301, 1407, 1513
BsoBI	CYCGRG	2 cut(s)	596, 761
Bsp120I	GGGCCC	1 cut(s)	1224
Bsp1286I	GDGCHC	8 cut(s)	112, 469, 575, 1026, 1200, 1228, 1477, 1501
Bsp1407I	TGTACA	1 cut(s)	1067
Bsp143I	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
Bsp19I	CCATGG	3 cut(s)	348, 1465, 1647
BspANI	GGCC	5 cut(s)	308, 1226, 1301, 1407, 1513
BspCNI	CTCAG	6 cut(s)	12, 117, 237, 325, 351, 496
BspFNI	CGCG	2 cut(s)	891, 1791
BspLI	GGNNCC	3 cut(s)	346, 1226, 1685
BspMAI	CTGCAG	1 cut(s)	1310
BspMI	ACCTGC	1 cut(s)	332
BspPI	GGATC	5 cut(s)	1178, 1678, 1691, 1794, 1874
BsrBI	CCGCTC	2 cut(s)	720, 1509
BsrDI	GCAATG	3 cut(s)	438, 1425, 1525
BsrGI	TGTACA	1 cut(s)	1067
BsrI	ACTGG	4 cut(s)	75, 195, 377, 1864
BssECI	CCNNGG	5 cut(s)	348, 1227, 1377, 1465, 1647
BssMI	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
BssNAI	GTATAC	3 cut(s)	969, 1179, 1284
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	299
BssT1I	CCWWGG	4 cut(s)	348, 1377, 1465, 1647
Bst1107I	GTATAC	3 cut(s)	969, 1179, 1284
Bst2BI	CACGAG	1 cut(s)	299
Bst2UI	CCWGG	1 cut(s)	1229
Bst4CI	ACNGT	4 cut(s)	1076, 1091, 1496, 1693
Bst6I	CTCTTC	3 cut(s)	101, 121, 1530
BstACI	GRCGYC	1 cut(s)	135
BstAUI	TGTACA	1 cut(s)	1067
BstBAI	YACGTR	3 cut(s)	966, 1176, 1443
BstC8I	GCNNGC	6 cut(s)	306, 330, 1310, 1363, 1511, 1819
BstDEI	CTNAG	8 cut(s)	20, 104, 245, 333, 359, 504, 830, 1242
BstDSI	CCRYGG	3 cut(s)	348, 1465, 1647
BstENI	CCTNNNNNAGG	1 cut(s)	1306
BstF5I	GGATG	3 cut(s)	936, 1423, 1461
BstFNI	CGCG	2 cut(s)	891, 1791
BstH2I	RGCGCY	1 cut(s)	359
BstHHI	GCGC	2 cut(s)	358, 431
BstKTI	GATC	8 cut(s)	251, 613, 804, 876, 1173, 1686, 1789, 1869
BstMAI	GTCTC	2 cut(s)	675, 1097
BstMBI	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
BstMWI	GCNNNNNNNGC	7 cut(s)	49, 329, 338, 853, 1358, 1515, 1827
BstNI	CCWGG	1 cut(s)	1229
BstNSI	RCATGY	2 cut(s)	814, 1821
BstSCI	CCNGG	2 cut(s)	556, 1227
BstSFI	CTRYAG	2 cut(s)	1306, 1594
BstSLI	GKGCMC	2 cut(s)	1228, 1477
BstSNI	TACGTA	2 cut(s)	966, 1443
BstUI	CGCG	2 cut(s)	891, 1791
BstV1I	GCAGC	6 cut(s)	399, 514, 1172, 1630, 1754, 1814
BstX2I	RGATCY	2 cut(s)	248, 1683
BstYI	RGATCY	2 cut(s)	248, 1683
BstZ17I	GTATAC	3 cut(s)	969, 1179, 1284
BsuRI	GGCC	5 cut(s)	308, 1226, 1301, 1407, 1513
BtgI	CCRYGG	3 cut(s)	348, 1465, 1647
BtgZI	GCGATG	1 cut(s)	151
BtsCI	GGATG	3 cut(s)	936, 1423, 1461
BtsI	GCAGTG	1 cut(s)	1198
BtsIMutI	CAGTG	5 cut(s)	188, 883, 1081, 1198, 1698
BveI	ACCTGC	1 cut(s)	332
Cac8I	GCNNGC	6 cut(s)	306, 330, 1310, 1363, 1511, 1819
CaiI	CAGNNNCTG	2 cut(s)	190, 1095
CfoI	GCGC	2 cut(s)	358, 431
Cfr13I	GGNCC	5 cut(s)	478, 1224, 1225, 1511, 1774
CseI	GACGC	1 cut(s)	143
Csp6I	GTAC	3 cut(s)	1068, 1612, 1618
CviQI	GTAC	3 cut(s)	1068, 1612, 1618
DdeI	CTNAG	8 cut(s)	20, 104, 245, 333, 359, 504, 830, 1242
DpnI	GATC	8 cut(s)	250, 612, 803, 875, 1172, 1685, 1788, 1868
DpnII	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
EaeI	YGGCCR	1 cut(s)	1405
Eam1104I	CTCTTC	3 cut(s)	101, 121, 1530
EarI	CTCTTC	3 cut(s)	101, 121, 1530
EciI	GGCGGA	1 cut(s)	752
Ecl136II	GAGCTC	1 cut(s)	1024
Eco105I	TACGTA	2 cut(s)	966, 1443
Eco130I	CCWWGG	4 cut(s)	348, 1377, 1465, 1647
Eco24I	GRGCYC	3 cut(s)	469, 1026, 1228
Eco47I	GGWCC	2 cut(s)	478, 1774
Eco53kI	GAGCTC	1 cut(s)	1024
Eco57I	CTGAAG	1 cut(s)	1416
Eco88I	CYCGRG	2 cut(s)	596, 761
EcoICRI	GAGCTC	1 cut(s)	1024
EcoNI	CCTNNNNNAGG	1 cut(s)	1306
EcoO109I	RGGNCCY	2 cut(s)	1224, 1225
EcoRI	GAATTC	1 cut(s)	15
EcoRII	CCWGG	1 cut(s)	1227
EcoT14I	CCWWGG	4 cut(s)	348, 1377, 1465, 1647
EcoT38I	GRGCYC	3 cut(s)	469, 1026, 1228
ErhI	CCWWGG	4 cut(s)	348, 1377, 1465, 1647
FauI	CCCGC	2 cut(s)	713, 1502
FauNDI	CATATG	1 cut(s)	1018
FbaI	TGATCA	2 cut(s)	801, 873
FblI	GTMKAC	3 cut(s)	968, 1178, 1283
FokI	GGATG	3 cut(s)	943, 1430, 1468
FriOI	GRGCYC	3 cut(s)	469, 1026, 1228
FspBI	CTAG	1 cut(s)	1667
FspI	TGCGCA	1 cut(s)	430
GlaI	GCGC	2 cut(s)	357, 430
GsaI	CCCAGC	1 cut(s)	1002
HaeII	RGCGCY	1 cut(s)	359
HaeIII	GGCC	5 cut(s)	308, 1226, 1301, 1407, 1513
HapII	CCGG	1 cut(s)	557
HgaI	GACGC	1 cut(s)	143
HhaI	GCGC	2 cut(s)	358, 431
Hin1I	GRCGYC	1 cut(s)	135
Hin6I	GCGC	2 cut(s)	356, 429
HinP1I	GCGC	2 cut(s)	356, 429
HincII	GTYRAC	1 cut(s)	1602
HindII	GTYRAC	1 cut(s)	1602
HindIII	AAGCTT	1 cut(s)	1712
HinfI	GANTC	7 cut(s)	287, 553, 637, 677, 1050, 1369, 1634
HpaII	CCGG	1 cut(s)	557
HphI	GGTGA	4 cut(s)	246, 502, 635, 1261
Hpy166II	GTNNAC	7 cut(s)	795, 969, 1179, 1284, 1475, 1602, 1768
Hpy188III	TCNNGA	8 cut(s)	272, 598, 674, 763, 1115, 1415, 1681, 1708
Hpy8I	GTNNAC	7 cut(s)	795, 969, 1179, 1284, 1475, 1602, 1768
Hpy99I	CGWCG	4 cut(s)	158, 320, 323, 1152
HpyAV	CCTTC	5 cut(s)	514, 817, 1040, 1246, 1312
HpyCH4III	ACNGT	4 cut(s)	1076, 1091, 1496, 1693
HpyCH4IV	ACGT	6 cut(s)	581, 965, 1175, 1391, 1442, 1782
HpyF10VI	GCNNNNNNNGC	7 cut(s)	49, 329, 338, 853, 1358, 1515, 1827
HpyF3I	CTNAG	8 cut(s)	20, 104, 245, 333, 359, 504, 830, 1242
HpySE526I	ACGT	6 cut(s)	581, 965, 1175, 1391, 1442, 1782
Hsp92I	GRCGYC	1 cut(s)	135
HspAI	GCGC	2 cut(s)	356, 429
Ksp22I	TGATCA	2 cut(s)	801, 873
Kzo9I	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
LmnI	GCTCC	2 cut(s)	70, 717
Lsp1109I	GCAGC	6 cut(s)	399, 514, 1172, 1630, 1754, 1814
LweI	GCATC	2 cut(s)	537, 747
MaeI	CTAG	1 cut(s)	1667
MaeII	ACGT	6 cut(s)	581, 965, 1175, 1391, 1442, 1782
MaeIII	GTNAC	3 cut(s)	186, 1438, 1792
MalI	GATC	8 cut(s)	250, 612, 803, 875, 1172, 1685, 1788, 1868
MbiI	CCGCTC	2 cut(s)	720, 1509
MboI	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
MboII	GAAGA	6 cut(s)	88, 108, 165, 243, 1547, 1738
MfeI	CAATTG	1 cut(s)	378
MflI	RGATCY	2 cut(s)	248, 1683
MhlI	GDGCHC	8 cut(s)	112, 469, 575, 1026, 1200, 1228, 1477, 1501
MlsI	TGGCCA	1 cut(s)	1407
MluNI	TGGCCA	1 cut(s)	1407
MlyI	GAGTC	1 cut(s)	1628
MmeI	TCCRAC	5 cut(s)	61, 92, 1237, 1248, 1638
Mox20I	TGGCCA	1 cut(s)	1407
MroXI	GAANNNNTTC	1 cut(s)	641
MscI	TGGCCA	1 cut(s)	1407
MseI	TTAA	2 cut(s)	278, 1218
MslI	CAYNNNNRTG	3 cut(s)	809, 1470, 1652
Msp20I	TGGCCA	1 cut(s)	1407
MspA1I	CMGCKG	3 cut(s)	1163, 1436, 1643
MspI	CCGG	1 cut(s)	557
MspR9I	CCNGG	2 cut(s)	558, 1229
MunI	CAATTG	1 cut(s)	378
MvaI	CCWGG	1 cut(s)	1229
MvnI	CGCG	2 cut(s)	891, 1791
MwoI	GCNNNNNNNGC	7 cut(s)	49, 329, 338, 853, 1358, 1515, 1827
NciI	CCSGG	1 cut(s)	558
NcoI	CCATGG	3 cut(s)	348, 1465, 1647
NdeI	CATATG	1 cut(s)	1018
NdeII	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
NlaIV	GGNNCC	3 cut(s)	346, 1226, 1685
NmuCI	GTSAC	2 cut(s)	186, 1792
NsbI	TGCGCA	1 cut(s)	430
NspI	RCATGY	2 cut(s)	814, 1821
PaeI	GCATGC	1 cut(s)	1821
PaeR7I	CTCGAG	1 cut(s)	761
PciI	ACATGT	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	1 cut(s)	1788
PdmI	GAANNNNTTC	1 cut(s)	641
PfeI	GAWTC	6 cut(s)	287, 553, 637, 677, 1050, 1369
PflMI	CCANNNNNTGG	4 cut(s)	475, 487, 1456, 1783
PleI	GAGTC	1 cut(s)	1628
PpsI	GAGTC	1 cut(s)	1628
Ppu21I	YACGTR	3 cut(s)	966, 1176, 1443
PscI	ACATGT	1 cut(s)	810
PshBI	ATTAAT	1 cut(s)	1218
Psp124BI	GAGCTC	1 cut(s)	1026
Psp6I	CCWGG	1 cut(s)	1227
PspFI	CCCAGC	1 cut(s)	998
PspGI	CCWGG	1 cut(s)	1227
PspN4I	GGNNCC	3 cut(s)	346, 1226, 1685
PspOMI	GGGCCC	1 cut(s)	1224
PspPI	GGNCC	5 cut(s)	478, 1224, 1225, 1511, 1774
PstI	CTGCAG	1 cut(s)	1310
PstNI	CAGNNNCTG	2 cut(s)	190, 1095
PsuI	RGATCY	2 cut(s)	248, 1683
PvuII	CAGCTG	2 cut(s)	1163, 1436
RsaI	GTAC	3 cut(s)	1069, 1613, 1619
RsaNI	GTAC	3 cut(s)	1068, 1612, 1618
RseI	CAYNNNNRTG	3 cut(s)	809, 1470, 1652
SacI	GAGCTC	1 cut(s)	1026
SaqAI	TTAA	2 cut(s)	278, 1218
Sau3AI	GATC	8 cut(s)	248, 610, 801, 873, 1170, 1683, 1786, 1866
Sau96I	GGNCC	5 cut(s)	478, 1224, 1225, 1511, 1774
ScaI	AGTACT	1 cut(s)	1619
SchI	GAGTC	1 cut(s)	1628
ScrFI	CCNGG	2 cut(s)	558, 1229
SduI	GDGCHC	8 cut(s)	112, 469, 575, 1026, 1200, 1228, 1477, 1501
SfaNI	GCATC	2 cut(s)	537, 747
SfcI	CTRYAG	2 cut(s)	1306, 1594
Sfr274I	CTCGAG	1 cut(s)	761
SinI	GGWCC	2 cut(s)	478, 1774
SlaI	CTCGAG	1 cut(s)	761
SmiMI	CAYNNNNRTG	3 cut(s)	809, 1470, 1652
SmlI	CTYRAG	2 cut(s)	682, 761
SmoI	CTYRAG	2 cut(s)	682, 761
SnaBI	TACGTA	2 cut(s)	966, 1443
SphI	GCATGC	1 cut(s)	1821
SspMI	CTAG	1 cut(s)	1667
SstI	GAGCTC	1 cut(s)	1026
StyD4I	CCNGG	2 cut(s)	556, 1227
StyI	CCWWGG	4 cut(s)	348, 1377, 1465, 1647
TaaI	ACNGT	4 cut(s)	1076, 1091, 1496, 1693
TaiI	ACGT	6 cut(s)	584, 968, 1178, 1394, 1445, 1785
TaqI	TCGA	6 cut(s)	273, 397, 437, 645, 762, 1147
TatI	WGTACW	2 cut(s)	1067, 1617
TauI	GCSGC	4 cut(s)	412, 891, 1301, 1643
TfiI	GAWTC	6 cut(s)	287, 553, 637, 677, 1050, 1369
Tru1I	TTAA	2 cut(s)	278, 1218
Tru9I	TTAA	2 cut(s)	278, 1218
TscAI	CASTG	5 cut(s)	195, 883, 1081, 1205, 1698
TseFI	GTSAC	2 cut(s)	186, 1792
TseI	GCWGC	6 cut(s)	412, 527, 1160, 1643, 1742, 1802
Tsp45I	GTSAC	2 cut(s)	186, 1792
TspGWI	ACGGA	1 cut(s)	304
TspRI	CASTG	5 cut(s)	195, 883, 1081, 1205, 1698
Van91I	CCANNNNNTGG	4 cut(s)	475, 487, 1456, 1783
VneI	GTGCAC	1 cut(s)	1473
VpaK11BI	GGWCC	2 cut(s)	478, 1774
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	1 cut(s)	1306
XapI	RAATTY	4 cut(s)	15, 280, 454, 497
XceI	RCATGY	2 cut(s)	814, 1821
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1415, 1654
XhoI	CTCGAG	1 cut(s)	761
XmiI	GTMKAC	3 cut(s)	968, 1178, 1283
XmnI	GAANNNNTTC	1 cut(s)	641
XspI	CTAG	1 cut(s)	1667
ZrmI	AGTACT	1 cut(s)	1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.